########### track hub for Chiara Di Vona / Susana de La Luna - July 2015 ############ ##### Create a super track to represent each IP and associated peaks ############################################################################################################# ### Super track for DYRK1A, T98G, Cycling ### track CD2_vs_CD1_all superTrack on show shortLabel CD2_vs_CD1_all longLabel CD2_vs_CD1_all priority 1 track CD2_vs_CD1_peaks_narrow parent CD2_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD2_vs_CD1_p0.0005.bb shortLabel peaks_DYRK1A_Cycling_narrow longLabel peaks_DYRK1A_Cycling_narrow type bigBed visibility full color 180,102,255 priority 1.1 track CD2_vs_CD1_peaks_broad parent CD2_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD2_vs_CD1_q0.05.bb shortLabel peaks_DYRK1A_Cycling_broad longLabel peaks_DYRK1A_Cycling_broad type bigBed visibility full color 180,102,255 priority 1.2 ### multiWig container storing bigwig data (overlay) ### track CD2_vs_CD1_bigwig parent CD2_vs_CD1_all container multiWig shortLabel DYRK1A (Cycling) # the important label which will be displayed longLabel DYRK1A, Cycling, T98G, (CD2_vs_CD1) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:100:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 1.3 track CD2 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD2_10344_CAGATC_sort_coord.bw shortLabel CD2 longLabel CD2 (DYRK1A cycling conditions, T98G cell line) parent CD2_vs_CD1_bigwig type bigWig color 180,102,255 track CD1_a bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD1_10343_CGATGT_sort_coord.bw shortLabel CD1 longLabel CD1 (input cycling conditions, T98G cell line) type bigWig parent CD2_vs_CD1_bigwig color 136,102,255 ############################################################################################################# ### Super track for PolII cycling conditions, T98G ### track CD3_vs_CD1_all superTrack on show shortLabel CD3_vs_CD1_all longLabel CD3_vs_CD1_all priority 3 track CD3_vs_CD1_peaks_narrow parent CD3_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD3_vs_CD1_p0.0005.bb shortLabel peaks_Pol2_Cycling_narrow longLabel peaks_Pol2_Cycling_narrow type bigBed visibility full color 180,102,255 priority 3.1 track CD3_vs_CD1_peaks_broad parent CD3_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD3_vs_CD1_q0.05.bb shortLabel peaks_Pol2_Cycling_broad longLabel peaks_Pol2_Cycling_broad type bigBed visibility full color 180,102,255 priority 3.2 ### multiWig container storing bigwig data (overlay) ### track CD3_vs_CD1_bigwig parent CD3_vs_CD1_all container multiWig shortLabel Pol2 (Cycling) longLabel Pol2, Cycling, T98G (CD3_vs_CD1) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:100:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 3.3 track CD3 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD3_10345_GTGAAA_sort_coord.bw shortLabel CD3 longLabel CD3 (PolII cycling conditions, T98G cell line) parent CD3_vs_CD1_bigwig type bigWig color 180,102,255 track CD1_b bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD1_10343_CGATGT_sort_coord.bw shortLabel CD1 longLabel CD1 (input cycling conditions, T98G cell line) type bigWig parent CD3_vs_CD1_bigwig color 136,102,255 ############################################################################################################# ### Super track for PolIII cycling conditions, T98G ### track CD4_vs_CD1_all superTrack on show shortLabel CD4_vs_CD1_all longLabel CD4_vs_CD1_all priority 5 track CD4_vs_CD1_peaks_narrow parent CD4_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD4_vs_CD1_p0.0005.bb shortLabel peaks_Pol3_Cycling_narrow longLabel peaks_Pol3_Cycling_narrow type bigBed visibility full color 180,102,255 priority 5.1 track CD4_vs_CD1_peaks_broad parent CD4_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD4_vs_CD1_q0.05.bb shortLabel peaks_Pol3_Cycling_broad longLabel peaks_Pol3_Cycling_broad type bigBed visibility full color 180,102,255 priority 5.2 ### multiWig container storing bigwig data (overlay) ### track CD4_vs_CD1_bigwig parent CD4_vs_CD1_all container multiWig shortLabel Pol3 (Cycling) longLabel Pol3, Cycling, T98G (CD4_vs_CD1) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 5.3 track CD4 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD4_10346_ACAGTG_sort_coord.bw shortLabel CD4 longLabel CD4 (PolIII cycling conditions, T98G cell line) parent CD4_vs_CD1_bigwig type bigWig color 180,102,255 track CD1_c bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD1_10343_CGATGT_sort_coord.bw shortLabel CD1 longLabel CD1 (input cycling conditions, T98G cell line) type bigWig parent CD4_vs_CD1_bigwig color 136,102,255 ############################################################################################################# ### Super track for TFIIIC cycling conditions, T98G ### track CD5_vs_CD1_all superTrack on show shortLabel CD5_vs_CD1_all longLabel CD5_vs_CD1_all priority 7 track CD5_vs_CD1_peaks_narrow parent CD5_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD5_vs_CD1_p0.0005.bb shortLabel peaks_TFIIIC_Cycling_narrow longLabel peaks_TFIIIC_Cycling_narrow type bigBed visibility full color 180,102,255 priority 7.1 track CD5_vs_CD1_peaks_broad parent CD5_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD5_vs_CD1_q0.05.bb shortLabel peaks_TFIIIC_Cycling_broad longLabel peaks_TFIIIC_Cycling_broad type bigBed visibility full color 180,102,255 priority 7.2 ### multiWig container storing bigwig data (overlay) ### track CD5_vs_CD1_bigwig parent CD5_vs_CD1_all container multiWig shortLabel TFIIIC (Cycling) longLabel TFIIIC, Cycling, T98G (CD5_vs_CD1) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 7.3 track CD5 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD5_10347_GCCAAT_sort_coord.bw shortLabel CD5 longLabel CD5 (TFIIIC cycling conditions, T98G cell line) parent CD5_vs_CD1_bigwig type bigWig color 180,102,255 track CD1_d bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD1_10343_CGATGT_sort_coord.bw shortLabel CD1 longLabel CD1 (input cycling conditions, T98G cell line) type bigWig parent CD5_vs_CD1_bigwig color 136,102,255 ############################################################################################################# ### Super track for CHD2 cycling conditions, T98G ### track CD6_vs_CD1_all superTrack on show shortLabel CD6_vs_CD1_all longLabel CD6_vs_CD1_all priority 9 track CD6_vs_CD1_peaks_narrow parent CD6_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD6_vs_CD1_p0.0005.bb shortLabel peaks_CHD2_Cycling_narrow longLabel peaks_CHD2_Cycling_narrow type bigBed visibility full color 180,102,255 priority 9.1 track CD6_vs_CD1_peaks_broad parent CD6_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD6_vs_CD1_q0.05.bb shortLabel peaks_CHD2_Cycling_broad longLabel peaks_CHD2_Cycling_broad type bigBed visibility full color 180,102,255 priority 9.2 ### multiWig container storing bigwig data (overlay) ### track CD6_vs_CD1_bigwig parent CD6_vs_CD1_all container multiWig shortLabel CHD2 (Cycling) longLabel CHD2, Cycling, T98G (CD6_vs_CD1) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 9.3 track CD6 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD6_10348_ATGTCA_sort_coord.bw shortLabel CD6 longLabel CD6 (CHD2 cycling conditions, T98G cell line) parent CD6_vs_CD1_bigwig type bigWig color 180,102,255 track CD1_e bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD1_10343_CGATGT_sort_coord.bw shortLabel CD1 longLabel CD1 (input cycling conditions, T98G cell line) type bigWig parent CD6_vs_CD1_bigwig color 136,102,255 ############################################################################################################# ### Super track for BRCA1 cycling conditions, T98G ### track CD7_vs_CD1_all superTrack on show shortLabel CD7_vs_CD1_all longLabel CD7_vs_CD1_all priority 10 track CD7_vs_CD1_peaks_narrow parent CD7_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD7_vs_CD1_p0.0005.bb shortLabel peaks_BRCA1_Cycling_narrow longLabel peaks_BRCA1_Cycling_narrow type bigBed visibility full color 180,102,255 priority 10.1 track CD7_vs_CD1_peaks_broad parent CD7_vs_CD1_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD7_vs_CD1_q0.05.bb shortLabel peaks_BRCA1_Cycling_broad longLabel peaks_BRCA1_Cycling_broad type bigBed visibility full color 180,102,255 priority 10.2 ### multiWig container storing bigwig data (overlay) ### track CD7_vs_CD1_bigwig parent CD7_vs_CD1_all container multiWig shortLabel BRCA1 (Cycling) longLabel BRCA1, Cycling, T98G (CD7_vs_CD1) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 10.3 track CD7 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD7_10349_ATCACG_sort_coord.bw shortLabel CD7 longLabel CD7 (BRCA1 cycling conditions, T98G cell line) parent CD7_vs_CD1_bigwig type bigWig color 180,102,255 track CD1_f bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD1_10343_CGATGT_sort_coord.bw shortLabel CD1 longLabel CD1 (input cycling conditions, T98G cell line) type bigWig parent CD7_vs_CD1_bigwig color 136,102,255 ############################################################################################################# ### Super track for DYRK1A serum starved conditions, T98G ### track CD9_vs_CD8_all superTrack on show shortLabel CD9_vs_CD8_all longLabel CD9_vs_CD8_all priority 2 track CD9_vs_CD8_peaks_narrow parent CD9_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD9_vs_CD8_p0.0005.bb shortLabel peaks_DYRK1A_SStarved_narrow longLabel peaks_DYRK1A_SStarved_narrow type bigBed visibility full color 158,243,149 priority 2.1 track CD9_vs_CD8_peaks_broad parent CD9_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD9_vs_CD8_q0.05.bb shortLabel peaks_DYRK1A_SStarved_broad longLabel peaks_DYRK1A_SStarved_broad type bigBed visibility full color 158,243,149 priority 2.2 ### multiWig container storing bigwig data (overlay) ### track CD9_vs_CD8_bigwig parent CD9_vs_CD8_all container multiWig shortLabel DYRK1A (Serum starved) longLabel DYRK1A, Serum starved, T98G (CD9_vs_CD8) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 2.3 track CD9 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD9_10351_GTGGCC_sort_coord.bw shortLabel CD9 longLabel CD9 (DYRK1A serum starved conditions, T98G cell line) parent CD9_vs_CD8_bigwig type bigWig color 158,243,149 track CD8 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD8_10350_TAGCTT_sort_coord.bw shortLabel CD8 longLabel CD8 (input cycling conditions, T98G cell line) type bigWig parent CD9_vs_CD8_bigwig color 55,171,40 ############################################################################################################# ### Super track for PolII serum starved conditions, T98G ### track CD10_vs_CD8_all superTrack on show shortLabel CD10_vs_CD8_all longLabel CD10_vs_CD8_all priority 4 track CD10_vs_CD8_peaks_narrow parent CD10_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD10_vs_CD8_p0.0005.bb shortLabel peaks_Pol2_SStarved_narrow longLabel peaks_Pol2_SStarved_narrow type bigBed visibility full color 158,243,149 priority 4.1 track CD10_vs_CD8_peaks_broad parent CD10_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD10_vs_CD8_q0.05.bb shortLabel peaks_Pol2_SStarved_broad longLabel peaks_Pol2_SStarved_broad type bigBed visibility full color 158,243,149 priority 4.2 ### multiWig container storing bigwig data (overlay) ### track CD10_vs_CD8_bigwig parent CD10_vs_CD8_all container multiWig shortLabel Pol2 (Serum starved) longLabel Pol2, Serum starved, T98G (CD10_vs_CD8) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 4.3 track CD10 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD10_10352_TTAGGC_sort_coord.bw shortLabel CD10 longLabel CD10 (PolII serum starved conditions, T98G cell line) parent CD10_vs_CD8_bigwig type bigWig color 158,243,149 track CD8_b bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD8_10350_TAGCTT_sort_coord.bw shortLabel CD8 longLabel CD8 (input cycling conditions, T98G cell line) type bigWig parent CD10_vs_CD8_bigwig color 50,142,40 ############################################################################################################# ### Super track for PolIII serum starved conditions, T98G ### track CD11_vs_CD8_all superTrack on show shortLabel CD11_vs_CD8_all longLabel CD11_vs_CD8_all priority 6 track CD11_vs_CD8_peaks_narrow parent CD11_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD11_vs_CD8_p0.0005.bb shortLabel peaks_Pol3_SStarved_narrow longLabel peaks_Pol3_SStarved_narrow type bigBed visibility full color 158,243,149 priority 6.1 track CD11_vs_CD8_peaks_broad parent CD11_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD11_vs_CD8_q0.05.bb shortLabel peaks_Pol3_SStarved_broad longLabel peaks_Pol3_SStarved_broad type bigBed visibility full color 158,243,149 priority 6.2 ### multiWig container storing bigwig data (overlay) ### track CD11_vs_CD8_bigwig parent CD11_vs_CD8_all container multiWig shortLabel Pol3 (Serum starved) longLabel Pol3, Serum starved, T98G (CD11_vs_CD8) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 6.3 track CD11 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD11_10353_GATCAG_sort_coord.bw shortLabel CD11 longLabel CD11 (PolIII serum starved conditions, T98G cell line) parent CD11_vs_CD8_bigwig type bigWig color 158,243,149 track CD8_c bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD8_10350_TAGCTT_sort_coord.bw shortLabel CD8 longLabel CD8 (input cycling conditions, T98G cell line) type bigWig parent CD11_vs_CD8_bigwig color 50,142,40 ############################################################################################################# ### Super track for TFIIIC serum starved conditions, T98G ### track CD12_vs_CD8_all superTrack on show shortLabel CD12_vs_CD8_all longLabel CD12_vs_CD8_all priority 8 track CD12_vs_CD8_peaks_narrow parent CD12_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_narrow_CD12_vs_CD8_p0.0005.bb shortLabel peaks_TFIIIC_SStarved_narrow longLabel peaks_TFIIIC_SStarved_narrow type bigBed visibility full color 158,243,149 priority 8.1 track CD12_vs_CD8_peaks_broad parent CD12_vs_CD8_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/UCSC/bigbed/macs2_broad_CD12_vs_CD8_q0.05.bb shortLabel peaks_TFIIIC_SStarved_broad longLabel peaks_TFIIIC_SStarved_broad type bigBed visibility full color 158,243,149 priority 8.2 ### multiWig container storing bigwig data (overlay) ### track CD12_vs_CD8_bigwig parent CD12_vs_CD8_all container multiWig shortLabel TFIIIC (Serum starved) longLabel TFIIIC, Serum starved, T98G (CD12_vs_CD8) type bigWig 0 30000 #viewLimits 0:100 visibility full #maxHeightPixels 150:30:11 aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 8.3 track CD12 bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD12_10354_ACTGAT_sort_coord.bw shortLabel CD12 longLabel CD12 (TFIIIC serum starved conditions, T98G cell line) parent CD12_vs_CD8_bigwig type bigWig color 158,243,149 track CD8_d bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/150615_ChIPseq/bigwig/CD8_10350_TAGCTT_sort_coord.bw shortLabel CD8 longLabel CD8 (input cycling conditions, T98G cell line) type bigWig parent CD12_vs_CD8_bigwig color 50,142,40