########### track hub for Chiara Di Vona / Susana de La Luna - July 2015 ############ ##### Create a super track to represent each IP and associated peaks ############################################################################################################# ### Super track for 8WG, cycling ### track 8WG_vs_input_cycling_all superTrack on show shortLabel 8WG cycling longLabel 8WG cycling priority 1 track 8WG_vs_input_cycling_bigbed_morestringent parent 8WG_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD1_vs_input_cycl_peaks.bb shortLabel peaks_8WG_vs_input_cycling_morestringent longLabel peaks_8WG_vs_input_cycling_morestringent type bigBed visibility full color 180,102,255 priority 1.1 track 8WG_vs_input_cycling_bigbed parent 8WG_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD1_vs_input_cycl_peaks_p00005.bb shortLabel peaks_8WG_vs_input_cycling longLabel peaks_8WG_vs_input_cycling type bigBed visibility full color 180,102,255 priority 1.2 ### multiWig container storing bigwig data (overlay) ### track 8WG_vs_input_cycling_bigwig parent 8WG_vs_input_cycling_all container multiWig shortLabel 8WG_vs_input_cycling # the important label which will be displayed longLabel 8WG_vs_input_cycling type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 1.3 track 8WG_cycling_TF bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/CD1_11077_CGATGT.bw shortLabel 8WG_cycling longLabel 8WG cycling parent 8WG_vs_input_cycling_bigwig type bigWig color 180,102,255 track input_cycling_A bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/input_cycl_11083_CGTACG.bw shortLabel input_cycling longLabel input cycling type bigWig parent 8WG_vs_input_cycling_bigwig color 136,102,255 ############################################################################################################# ### Super track for CDK7, cycling ### track CDK7_vs_input_cycling_all superTrack on show shortLabel CDK7_vs_input_cycling longLabel CDK7_vs_input_cycling priority 2 track CDK7_vs_input_cycling_bigbed_morestringent parent CDK7_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD3_vs_input_cycl_peaks.bb shortLabel peaks_CDK7_vs_input_cycling_morestringent longLabel peaks_CDK7_vs_input_cycling_morestringent type bigBed visibility full color 180,102,255 priority 2.1 track CDK7_vs_input_cycling_bigbed parent CDK7_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD3_vs_input_cycl_peaks_p00005.bb shortLabel peaks_CDK7_vs_input_cycling longLabel peaks_CDK7_vs_input_cycling type bigBed visibility full color 180,102,255 priority 2.2 ### multiWig container storing bigwig data (overlay) ### track CDK7_vs_input_cycling_bigwig parent CDK7_vs_input_cycling_all container multiWig shortLabel CDK7_vs_input_cycling # the important label which will be displayed longLabel CDK7_vs_input_cycling type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 2.3 track CDK7_cycling_TF bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/CD3_11079_CAGATC.bw shortLabel CDK7_cycling longLabel CDK7_cycling parent CDK7_vs_input_cycling_bigwig type bigWig color 180,102,255 track input_cycling_B bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/input_cycl_11083_CGTACG.bw shortLabel input_cycling longLabel input_cycling type bigWig parent CDK7_vs_input_cycling_bigwig color 136,102,255 ############################################################################################################# ### Super track for CDK9, cycling ### track CDK9_vs_input_cycling_all superTrack on show shortLabel CDK9_vs_input_cycling longLabel CDK9_vs_input_cycling priority 3 track CDK9_vs_input_cycling_bigbed_morestringent parent CDK9_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD4_vs_input_cycl_peaks.bb shortLabel peaks_CDK9_vs_input_cycling_morestringent longLabel peaks_CDK9_vs_input_cycling_morestringent type bigBed visibility full color 180,102,255 priority 3.1 track CDK9_vs_input_cycling_bigbed parent CDK9_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD4_vs_input_cycl_peaks_p00005.bb shortLabel peaks_CDK9_vs_input_cycling longLabel peaks_CDK9_vs_input_cycling type bigBed visibility full color 180,102,255 priority 3.2 ### multiWig container storing bigwig data (overlay) ### track CDK9_vs_input_cycling_bigwig parent CDK9_vs_input_cycling_all container multiWig shortLabel CDK9_vs_input_cycling # the important label which will be displayed longLabel CDK9_vs_input_cycling type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 3.3 track CDK9_cycling_TF bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/CD4_11080_CCGTCC.bw shortLabel CDK9_cycling longLabel CDK9_cycling parent CDK9_vs_input_cycling_bigwig type bigWig color 180,102,255 track input_cycling_C bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/input_cycl_11083_CGTACG.bw shortLabel input_cycling longLabel input_cycling type bigWig parent CDK9_vs_input_cycling_bigwig color 136,102,255 ############################################################################################################# ### Super track for 8WG, serum starved ### track 8WG_vs_input_ss_all superTrack on show shortLabel 8WG ss longLabel 8WG ss priority 4 track 8WG_vs_input_ss_bigbed_morestringent parent 8WG_vs_input_ss_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD2_vs_input_ss_peaks.bb shortLabel peaks_8WG_vs_input_ss_morestringent longLabel peaks_8WG_vs_input_ss_morestringent type bigBed visibility full color 180,102,255 priority 4.1 track 8WG_vs_input_ss_bigbed parent 8WG_vs_input_ss_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD2_vs_input_ss_peaks_p00005.bb shortLabel peaks_8WG_vs_input_ss longLabel peaks_8WG_vs_input_ss type bigBed visibility full color 180,102,255 priority 4.2 ### multiWig container storing bigwig data (overlay) ### track 8WG_vs_input_ss_bigwig parent 8WG_vs_input_ss_all container multiWig shortLabel 8WG_vs_input_ss # the important label which will be displayed longLabel 8WG_vs_input_ss type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 4.3 track 8WG_ss_TF bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/CD2_11078_TGACCA.bw shortLabel 8WG_ss longLabel 8WG ss parent 8WG_vs_input_ss_bigwig type bigWig color 180,102,255 track input_ss bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/input_ss_11084_ATTCCT.bw shortLabel input_ss longLabel input ss type bigWig parent 8WG_vs_input_ss_bigwig color 136,102,255 ############################################################################################################# ### Super track for DIA, cycling ### track DIA_vs_input_cycling_all superTrack on show shortLabel DIA cycling longLabel DIA cycling priority 5 track DIA_vs_input_cycling_bigbed parent DIA_vs_input_cycling_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_DIA_cycl_vs_input_cycl_peaks_p00005.bb shortLabel peaks_DIA_vs_input_cycling longLabel peaks_DIA_vs_input_cycling type bigBed visibility full color 180,102,255 priority 5.1 ### multiWig container storing bigwig data (overlay) ### track DIA_vs_input_cycling_bigwig parent DIA_vs_input_cycling_all container multiWig shortLabel DIA_vs_input_cycling # the important label which will be displayed longLabel DIA_vs_input_cycling type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 5.2 track DIA_cycling_IP bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/DIA_cycl_11136_CGTAGA.bw shortLabel DIA_cycling_IP longLabel DIA_cycling_IP parent DIA_vs_input_cycling_bigwig type bigWig color 180,102,255 track DIA_cycling_input bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/INPUT_cycl_11138_CACAGT.bw shortLabel DIA_cycling_input longLabel DIA_cycling_input type bigWig parent DIA_vs_input_cycling_bigwig color 136,102,255 ############################################################################################################# ### Super track for DIA, serum starved ### track DIA_vs_input_ss_all superTrack on show shortLabel DIA ss longLabel DIA ss priority 5 track DIA_vs_input_ss_bigbed parent DIA_vs_input_ss_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_DIA_SS_vs_input_SS_peaks_p00005.bb shortLabel peaks_DIA_vs_input_ss longLabel peaks_DIA_vs_input_ss type bigBed visibility full color 180,102,255 priority 5.1 ### multiWig container storing bigwig data (overlay) ### track DIA_vs_input_ss_bigwig parent DIA_vs_input_ss_all container multiWig shortLabel DIA_vs_input_ss # the important label which will be displayed longLabel DIA_vs_input_ss type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 5.2 track DIA_ss_IP bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/DIA_SS_11137_TCAGAG.bw shortLabel DIA_ss_IP longLabel DIA_ss_IP parent DIA_vs_input_ss_bigwig type bigWig color 180,102,255 track DIA_ss_input bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/INPUT_SS_11139_TTGGCA.bw shortLabel DIA_ss_input longLabel DIA_ss_input type bigWig parent DIA_vs_input_ss_bigwig color 136,102,255 ############################################################################################################# ### Super track for DYRK1A, Jurkat cycling ### track DYRK1A_vs_input_Jurkat_cycl_all superTrack on show shortLabel DYRK1A Jurkat cycling longLabel DYRK1A Jurkat cycling priority 6 track DYRK1A_vs_input_Jurkat_cycl_bigbed parent DYRK1A_vs_input_Jurkat_cycl_all bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/UCSC/bigbed/macs2_CD6_vs_input_jurkat_peaks_p00005.bb shortLabel peaks_DYRK1A_vs_input_Jurkat_cycl longLabel peaks_DYRK1A_vs_input_Jurkat_cycl type bigBed visibility full color 180,102,255 priority 6.1 ### multiWig container storing bigwig data (overlay) ### track DYRK1A_vs_input_Jurkat_cycl_bigwig parent DYRK1A_vs_input_Jurkat_cycl_all container multiWig shortLabel DYRK1A_vs_input_Jurkat_cycl # the important label which will be displayed longLabel DYRK1A_vs_input_Jurkat_cycl type bigWig 0 30000 visibility full aggregate transparentOverlay showSubtrackColorOnUi on windowingFunction mean configurable on autoScale on priority 6.2 track DYRK1A_Jurkat_IP bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/CD6_11082_GATCAG.bw shortLabel DYRK1A_Jurkat_IP longLabel DYRK1A_Jurkat_IP parent DYRK1A_vs_input_Jurkat_cycl_bigwig type bigWig color 180,102,255 track DYRK1A_Jurkat_input bigDataUrl http://public-docs.crg.es/biocore/sbonnin/Chiara_DiVona/1508_ChIPseqs/bigwig/CD5_11081_TTAGGC.bw shortLabel DYRK1A_Jurkat_input longLabel DYRK1A_Jurkat_input type bigWig parent DYRK1A_vs_input_Jurkat_cycl_bigwig color 136,102,255