######### track hub for Rosario Avolio - 2018 ##########
##### irCLIP project


#############################################################################################################

### Super track all irCLIP-seq data ###

track RAvolio_irCLIP
superTrack on show
shortLabel RAvolio_irCLIP
longLabel RAvolio_irCLIP

       ### multiWig containers storing bigwig data ###

        # 
        track RAvolio_irCLIP_norm
        parent RAvolio_irCLIP
        container multiWig
        shortLabel irCLIP-seq normalized to RNA
        longLabel irCLIP-seq normalized to RNA
        type bigWig 0 30000
        aggregate none
        visibility full
        showSubtrackColorOnUi on
        windowingFunction mean
        maxHeightPixels 100:70:11
        configurable on
        autoScale on
        priority 1

		track PMK_irCLIP_norm
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bigwig/PMK_irCLIPnormalizedToRNAseq.bw
		shortLabel PMK_irCLIP_norm
		longLabel PMK_irCLIP_norm
		parent RAvolio_irCLIP_norm
		type bigWig
		color 153,0,76
		priority 1

		track MSCV_irCLIP_norm
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bigwig/MSCV_irCLIPnormalizedToRNAseq.bw
		shortLabel MSCV_irCLIP_norm
		longLabel MSCV_irCLIP_norm
		parent RAvolio_irCLIP_norm
		type bigWig
		color 153,150,76
		priority 2

		track HRAS_irCLIP_norm
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bigwig/HRAS_irCLIPnormalizedToRNAseq.bw
		shortLabel HRAS_irCLIP_norm
		longLabel HRAS_irCLIP_norm
		parent RAvolio_irCLIP_norm
		type bigWig
		color 100,250,176
		priority 3



        ### multiWig containers storing bigwig data ###

        # 
        track RAvolio_irCLIP_UNR
        parent RAvolio_irCLIP
        container multiWig
        shortLabel CLIP-seq 0_1
        longLabel CLIP-seq 0_1
        type bigWig 0 30000
        aggregate none
        visibility full
        showSubtrackColorOnUi on
        windowingFunction mean
        maxHeightPixels 100:70:11
        configurable on
        autoScale on
        priority 1

		track UNR_irCLIP_AGACT
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bedgraph/MIX_RA_13_7_28413_NNNNAGACTWWW_1base.bw
		shortLabel UNR_irCLIP_AGACT
		longLabel UNR_irCLIP_AGACT
		parent RAvolio_irCLIP_all
		type bigWig
		color 153,0,76
		priority 1

		track UNR_irCLIP_CAAGT
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bedgraph/MIX_RA_13_7_28413_NNNNCAAGTWWW_1base.bw
		shortLabel UNR_irCLIP_CAAGT
		longLabel UNR_irCLIP_CAAGT
		parent RAvolio_irCLIP_UNR
		type bigWig
		color 153,0,76
		priority 2

		track UNR_irCLIP_CCGGA
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bedgraph/MIX_RA_13_7_28413_NNNNCCGGAWWW_1base.bw
		shortLabel UNR_irCLIP_CCGGA
		longLabel UNR_irCLIP_CCGGA
		parent RAvolio_irCLIP_UNR
		type bigWig
		color 153,0,76
		priority 3

		track UNR_iCLIP_TTTAA
		bigDataUrl https://public-docs.crg.es/biocore/sbonnin/Fatima_Gebauer/Rosario_Avolio/2018-08-02-irCLIP/UCSC/bedgraph/MIX_RA_13_7_28413_NNNNTTTAAWWW_1base.bw
		shortLabel UNR_iCLIP_TTTAA
		longLabel UNR_iCLIP_TTTAA
		parent RAvolio_irCLIP_UNR
		type bigWig
		color 53,10,153
		priority 4