# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/DNA_methylase.hmm.txt
# target sequence database: proteomes/Amphimedon_queenslandica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: DNA_methylase [M=335]
Accession: PF00145.17
Description: C-5 cytosine-specific DNA methylase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.7e-54 186.7 0.0 2.1e-54 186.4 0.0 1.1 1 tr|A0A1X7TJ66|A0A1X7TJ66_AMPQE Cytosine-specific methyltransfer
2.2e-52 179.8 0.0 2.2e-52 179.8 0.0 3.0 4 tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE DNA (cytosine-5)-methyltransfera
3.2e-51 175.9 0.0 5.1e-51 175.3 0.0 1.3 1 tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE Cytosine-specific methyltransfer
3.2e-38 133.2 0.0 5.3e-38 132.5 0.0 1.3 1 tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE Uncharacterized protein OS=Amphi
7.2e-33 115.6 0.0 3.4e-23 83.8 0.0 2.2 2 tr|A0A1X7U3G5|A0A1X7U3G5_AMPQE Uncharacterized protein OS=Amphi
5.7e-17 63.3 0.0 1.1e-16 62.4 0.0 1.4 1 tr|A0A1X7V196|A0A1X7V196_AMPQE Uncharacterized protein OS=Amphi
5.3e-14 53.6 0.0 9.7e-14 52.7 0.0 1.6 1 tr|A0A1X7UGK9|A0A1X7UGK9_AMPQE Uncharacterized protein OS=Amphi
1.8e-07 32.1 0.0 2.1e-07 31.9 0.0 1.1 1 tr|A0A1X7TJC1|A0A1X7TJC1_AMPQE Uncharacterized protein OS=Amphi
0.0062 17.2 0.0 0.011 16.4 0.0 1.3 1 tr|A0A1X7TED2|A0A1X7TED2_AMPQE Uncharacterized protein OS=Amphi
------ inclusion threshold ------
0.024 15.2 0.0 0.059 14.0 0.0 1.7 1 tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE Uncharacterized protein OS=Amphi
0.078 13.6 0.0 0.09 13.4 0.0 1.2 1 tr|A0A1X7T699|A0A1X7T699_AMPQE Uncharacterized protein OS=Amphi
0.079 13.6 0.0 0.09 13.4 0.0 1.2 1 tr|A0A1X7V411|A0A1X7V411_AMPQE Uncharacterized protein OS=Amphi
Domain annotation for each sequence (and alignments):
>> tr|A0A1X7TJ66|A0A1X7TJ66_AMPQE Cytosine-specific methyltransferase OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 186.4 0.0 5.9e-58 2.1e-54 1 232 [. 76 313 .. 76 347 .. 0.82
Alignments for each domain:
== domain 1 score: 186.4 bits; conditional E-value: 5.9e-58
-EEEEES-TT-HHHHHHHHTT-EEEEEEE--TTTHHHHHHH-.-SEEEES-.TTTS-.......GS--.-SEEEE---G CS
DNA_methylase 1 lkfidLfaGiGGfrlgleaagfecvaaseidkkaaktYeanfkkvsigDit.kidkk.......klpediDlLvgGfPC 71
++fidLfaG+GG+rl ++++g++cv+ +e+d+ ++tY+anf++++ D+ d+k ++p ++D+L++GfPC
tr|A0A1X7TJ66|A0A1X7TJ66_AMPQE 76 FRFIDLFAGVGGMRLPFDEIGGRCVFTAEWDRFSCETYKANFPEPIGSDHIlAGDIKpwaaepsSIP-SHDVLLAGFPC 153
79****************************************9555555431334446666699***.6********** PP
GGTECTSE........E--TTSGGG.......HHHHHHHHHHHHH--SEEEEEEEGGGGGGCCSHHHHHHHHHHH.HHT CS
DNA_methylase 72 qpfSvaGk........qkgfedtrg.......tLffeiiriikekkPkvfllENVkgLlkhdkgktlkvilekle.elG 134
qpfS+aG g tLf++ +rii++++P +fllENVk+L hdkg+t+ +i le elG
tr|A0A1X7TJ66|A0A1X7TJ66_AMPQE 154 QPFSIAGVskknalgrP------HGflcetqgTLFYDLARIIDHHRPPIFLLENVKNLERHDKGRTFATIKHVLEvELG 226
*******8554444433......334444445******************************************979** PP
EEEEEEEEEGGGTT-SB--EEEEEEEEEGGG----------SS---GGG.....TSGGGTTS-EEBTTTB--GGGSSST CS
DNA_methylase 135 YevsykllnasdyGvpQnReRvfivgirkdlelnvlvkvkefrfpkkkdleasktlrdlleekseldeektalsdklve 213
Y++++k++++s vpQ+ReR+fivg++ + + ++ +p+ + ++l ++l++ + k++l+d+l++
tr|A0A1X7TJ66|A0A1X7TJ66_AMPQE 227 YKIFHKVIDSSPW-VPQKRERLFIVGFKDHD---IDFDFEDIIVPDGQ----GPNLGSILQK---NVDPKYTLTDHLWN 294
***********98.*************9865...35777777777776....699******9...5899********** PP
T-EE--.......S---HH CS
DNA_methylase 214 keekikkttkaseegypke 232
++ k+++ + ++g+ ++
tr|A0A1X7TJ66|A0A1X7TJ66_AMPQE 295 YLISYKEKHRKAGNGFGYS 313
9999999999999999962 PP
>> tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE DNA (cytosine-5)-methyltransferase OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -4.3 2.7 5.8 2.1e+04 216 230 .. 90 104 .. 12 172 .. 0.45
2 ? -4.2 0.1 5.6 2e+04 175 199 .. 428 450 .. 416 460 .. 0.58
3 ? -0.6 0.1 0.43 1.6e+03 173 255 .. 731 812 .. 673 854 .. 0.66
4 ! 179.8 0.0 6e-56 2.2e-52 2 334 .. 989 1440 .. 988 1441 .. 0.78
Alignments for each domain:
== domain 1 score: -4.3 bits; conditional E-value: 5.8
EE--.......S--- CS
DNA_methylase 216 ekikkttkaseegyp 230
+++ + ++ +e ++
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 90 PQKRSKVEEEKEEVS 104
222211111111111 PP
== domain 2 score: -4.2 bits; conditional E-value: 5.6
-SS---GGG.....TSGGGTTS-EE CS
DNA_methylase 175 efrfpkkkdleasktlrdlleekse 199
++++++k +++++ +rd++e +
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 428 KKTKQTK--ATTTPLVRDIFETFFK 450
2233333..5789999999998543 PP
== domain 3 score: -0.6 bits; conditional E-value: 0.43
---SS---GGG.....TSGGGTTS-EEBTTTB--GGGSSSTT-EE--.......S---H.HHTS--B--TTS...-B-- CS
DNA_methylase 173 vkefrfpkkkdleasktlrdlleekseldeektalsdklvekeekikkttkaseegypk.elsrnridkveelkglsat 250
+ ++ +p++k +++++ + ++++ + l+ee +++ d+++ + + + ++++ +g + + ++ ++++e++++ ++
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 731 TVHSAVPINKIESEKPKITNYSSFQ--LNEESYSIGDCVYLSPHTYSFPNVKKTSGTAAnKKQKKEEEEFDESEYPEKY 807
4444444444344445555555543..7777777777776655544433333333333223333335555555555555 PP
--S-S CS
DNA_methylase 251 rrksg 255
r+ s+
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 808 RKVSD 812
55444 PP
== domain 4 score: 179.8 bits; conditional E-value: 6e-56
EEEEES-TT-HHHHHHHHTT.-EEEEEEE--TTTHHHHHHH-..-SEEEES-TTTS-.............GS--... CS
DNA_methylase 2 kfidLfaGiGGfrlgleaag.fecvaaseidkkaaktYeanfk.kvsigDitkidkk.............klpe..d 61
+++d faG+GG++ g+++ag + ++a+eid+ aa+ ++ n++ +++ D +i + lp+ d
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 989 RMLDVFAGCGGLSEGFHQAGvADSCWAVEIDEPAAQAFRLNNSqTTVFTDDCNILLSlvmegaktnsrgqLLPQkgD 1065
899*****************99********************99555555444433346666777888987887667 PP
-SEEEE---GGGTECTSE..E--TTSGGGHHHHHHHHHHHHH--SEEEEEEEGGGGGGCCSHHHHHHHHHHHHHTEE CS
DNA_methylase 62 iDlLvgGfPCqpfSvaGk..qkgfedtrgtLffeiiriikekkPkvfllENVkgLlkhdkgktlkvilekleelGYe 136
++lL+gG+PCq+fS ++ + +++L + + + + ++P +fllENV++ ++ +k+ +lk l l ++GY+
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 1066 VELLCGGPPCQGFSGMNRfnSREYSQFKNSLVISYLSFCEYYRPRFFLLENVRNFVSFKKSMVLKLTLRCLVKMGYQ 1142
**************988744666667778************************************************ PP
EEEEEEEGGGTT-SB--EEEEEEEEEGGG----------SS---GGG.....TSGGGTTS-EE...BTTTB--GGGS CS
DNA_methylase 137 vsykllnasdyGvpQnReRvfivgirkdlelnvlvkvkefrfpkkkdleasktlrdlleekse...ldeektalsdk 210
+++ +l+a +yGvpQ R+R +i++ +++l ++++ + f+ + + +++d++ e s + +t ++
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 1143 CTFGVLQAGQYGVPQTRRRAIILAAAPGEKL-PHFPNPTHVFSPRA-CQLTVVVNDIKYEGSIrmdSAPYRTITVRD 1217
***************************9876.68888888888887.699*******99976676566666667777 PP
SSTT-EE--.......S---H..HHTS--................................................ CS
DNA_methylase 211 lvekeekikkttkaseegypk..elsrnr................................................ 237
+++ +ik+ + + +y+ ++++r
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 1218 SMSDLPHIKNGSAVRSMNYNGepHCHYQRlmrgnqhqpvlydhickemnplvaarmrfipigpgsdwrdlpnkcirl 1294
77888888877777777777677566665777778889999888888889999999999988888888888877775 PP
........B--TTS...-B----S-STT-................................................ CS
DNA_methylase 238 ........idkveelkglsatrrksgrge................................................ 258
+ + t++++++g+
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 1295 sdgttapkL---------QYTHHDKKNGRaknkslrgvcpcatgqpcdssyrqygtlipwclphtgnrhnhwaglyg 1362
444332221.........22222222222334445555666666666666666666666666666666666666666 PP
......-B-TTS---EEEETTEEE--T.TTGGG--B-BHHHHHHHHT--TT-----SBHHHHHHHHTS--HHHHHHH CS
DNA_methylase 259 ......klekelaeagklqknkerfkpviekkriRrLtprEaarlqGfPddfefgskksaaykqiGnsVpvpvieai 329
++ +++ ++++k+++ v++++++R ++rE+ar qGfPd+f f ++ ++ +q+Gn+Vp+p+++ai
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 1363 rlewdgFFSTTVTNPEPMGKQGR----VLHPEQHRVVSVRECARSQGFPDTFRFFGTILDKHRQVGNAVPPPLAKAI 1435
55555555555555555666665....9************************************************* PP
HHHHH CS
DNA_methylase 330 akeik 334
+ eik
tr|A0A1X7VAU3|A0A1X7VAU3_AMPQE 1436 GLEIK 1440
*9997 PP
>> tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE Cytosine-specific methyltransferase OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 175.3 0.0 1.4e-54 5.1e-51 4 334 .. 2 447 .. 1 448 [. 0.74
Alignments for each domain:
== domain 1 score: 175.3 bits; conditional E-value: 1.4e-54
EEES-TT-HHHHHHHHTT.-EEEEEEE--TTTHHHHHHH-..-SEEEES-TTTS-.............GS--...-SEE CS
DNA_methylase 4 idLfaGiGGfrlgleaag.fecvaaseidkkaaktYeanfk.kvsigDitkidkk.............klpe..diDlL 65
+d faG+GG++ g+++ag + ++a+eid+ aa+ ++ n++ +++ D +i + +lp+ d++lL
tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE 2 LDVFAGCGGLSEGFHQAGvADSCWAVEIDEPAAQAFRLNYSqTTVFTDDCNILLSlvmegaktnsrgqSLPQkgDVELL 80
79****************99********************99555555444433346666777888999998667**** PP
EE---GGGTECTSE..E--TTSGGGHHHHHHHHHHHHH--SEEEEEEEGGGGGGCCSHHHHHHHHHHHHHTEEEEEEEE CS
DNA_methylase 66 vgGfPCqpfSvaGk..qkgfedtrgtLffeiiriikekkPkvfllENVkgLlkhdkgktlkvilekleelGYevsykll 142
+gG+PCq+fS ++ + +++L + + + + ++P++fllE V++ ++ +k+ +lk l l ++GY++++ +l
tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE 81 CGGPPCQGFSGMNIfnSREYSQFKNSLVISYLSFCEYYRPQFFLLESVRNFVSFKKSMVLKLTLRCLVKMGYQCTFGVL 159
**********988754777778888****************************************************** PP
EGGGTT-SB--EEEEEEEEEGGG----------SS---GGG.....TSGGGTTS-EE...BTTTB--GGGSSSTT-EE- CS
DNA_methylase 143 nasdyGvpQnReRvfivgirkdlelnvlvkvkefrfpkkkdleasktlrdlleekse...ldeektalsdklvekeeki 218
+a +yGvpQ R+R +i++ +++l ++++ + f+ + + + +d++ e s + +t ++ +++ +i
tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE 160 QAGQYGVPQTRRRAIILAAAPGEKL-PHFPNPTHVFSPRA-CQLTVVANDIKYEGSIrmdSAPYRTITVRDSMSDLPHI 236
*********************9876.58888888888887.68899999999886656555555666666677777777 PP
-.......S---H..HHTS--.......................................................... CS
DNA_methylase 219 kkttkaseegypk..elsrnr.......................................................... 237
k+ + + +y+ ++++r
tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE 237 KNGSAVRSMNYNGepHCHYQRlvrgkshrgtsgnqhqpvlyghickemsplvaarmrylpigpgsdwrdlpnkcirlsd 315
7666666666665665555555555555555555555666666655566666666666666655555555555544333 PP
B--TTS...-B----S-STT--B-TTS---EEEETTEEE--T..................................... CS
DNA_methylase 238 idkveelkglsatrrksgrgeklekelaeagklqknkerfkp..................................... 279
++ ++l+ + kn+++ ++
tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE 316 G--------------------TTAPKLQYTHHDKKNGRHKNKslrgvcscatgqpcdsfyrqygtlipcnhgayhiqvt 374
0....................3333333333333333332224444444444444444444444444444445556666 PP
...................TTGGG--B-BHHHHHHHHT--TT-----SBHHHHHHHHTS--HHHHHHHHHHHH CS
DNA_methylase 280 ..................viekkriRrLtprEaarlqGfPddfefgskksaaykqiGnsVpvpvieaiakeik 334
v++++++R +++E+ar qGfPd+f f ++ ++ +q+Gn+Vp+p++eai+ eik
tr|A0A1X7TKI6|A0A1X7TKI6_AMPQE 375 dtiigrgfmeepmgkqgrVLHPEQHRVVSVKECARSQGFPDTFHFFGTILDKHRQVGNAVPPPLAEAIGLEIK 447
666666666666777777***************************************************9997 PP
>> tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 132.5 0.0 1.5e-41 5.3e-38 3 329 .. 34 366 .. 32 370 .. 0.78
Alignments for each domain:
== domain 1 score: 132.5 bits; conditional E-value: 1.5e-41
EEEES-TT-HHHHHHHHTT..-EEEEEEE--TTTHHHHHHH-...-SEEEES-TTTS-GS--..-SEEEE---GGGTEC CS
DNA_methylase 3 fidLfaGiGGfrlgleaag..fecvaaseidkkaaktYeanfk..kvsigDitkidkkklpe.diDlLvgGfPCqpfSv 76
++++ +GiGG +++ +++g ++ aa++i+ +a ++Y+ nf+ kv + +i ++ ++l l++ ++PCqpf
tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE 34 VVEFYSGIGGWHYAIRETGlnLKILAAVDINTTANQVYKHNFPntKVLQRNILGLSAQELDSfLANLFTLSPPCQPFTR 112
799****************999*********************9999999999999999997669************** PP
TSEE--TTSGGGHHHHHHHHHHHHH-..-SEEEEEEEGGGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEGGGTT-SB-- CS
DNA_methylase 77 aGkqkgfedtrgtLffeiiriikekk..PkvfllENVkgLlkhdkgktlkvilekleelGYevsykllnasdyGvpQnR 153
+Gk+++ d r + ff + i+ + + P+++++ENVkg + +t +++ l+elGY+++ l+ +++G+p +R
tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE 113 QGKNEDDIDYRTDSFFHLMGILSAMQkpPQYIMMENVKGFELS---RTRGHFVHVLKELGYTFQEYLISPKQFGIPNSR 188
***********************98888***********9888...6678889999*********************** PP
EEEEEEEEEGGG----------SS---GGG.............TSGGGTTS-EEBTTTB--GGGSSSTT-EE--..... CS
DNA_methylase 154 eRvfivgirkdlelnvlvkvkefrfpkkkd........leasktlrdlleekseldeektalsdklvekeekikkttka 224
R ++++ +++++ + + ++++++ k+ + + ++ ++l++ se+d ++ + d ++ek+++ + +
tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE 189 LRYYLLARLSPRNFK--AAPLQDTVEHLKYyiptsfhdIHLKCDISSYLDDLSEIDVQQFLVPDRILEKYAQGLD--IV 263
***********9876..4444444444444455557776777777777777777788888888888887776643..33 PP
..S---HHHTS--B--TTS...-B----S-STT--B-TTS---EEEETTEEE--T.TTGGG--B-BHHHHHHHHT--TT CS
DNA_methylase 225 seegypkelsrnridkveelkglsatrrksgrgeklekelaeagklqknkerfkpviekkriRrLtprEaarlqGfPdd 303
s ++ + ++ r + + + + s ++++++ + l + ++ +k+++++ +++++ + R +tp+E+a+l++fP +
tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE 264 SAKSHS-SCCFTRGYYHYAVGTGSVLHHDCSVDLALAYQCYAEQKNNCDGI---KSLKELKLRYFTPQEVAKLMSFPAS 338
333333.23333223333333333333333332233334444444444443...3899********************* PP
-----SBH..HHHHHHHTS--HHHHHHH CS
DNA_methylase 304 fefgskks..aaykqiGnsVpvpvieai 329
+f+++ s + yk++GnsV+v v+ +
tr|A0A1X7U0G0|A0A1X7U0G0_AMPQE 339 HTFPTSVSnkQCYKLLGNSVNVFVVATL 366
7776666666************998765 PP
>> tr|A0A1X7U3G5|A0A1X7U3G5_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.7 0.0 2.7e-10 9.8e-07 4 48 .. 2 48 .. 1 54 [. 0.89
2 ! 83.8 0.0 9.3e-27 3.4e-23 55 232 .. 104 288 .. 91 369 .. 0.77
Alignments for each domain:
== domain 1 score: 29.7 bits; conditional E-value: 2.7e-10
EEES-TT-HHHHHHHHTT.-EEEEEEE--TTTHHHHHHH-..-SEEE CS
DNA_methylase 4 idLfaGiGGfrlgleaag.fecvaaseidkkaaktYeanfk.kvsig 48
+d faG+GG++ g+++ag + ++a+eid+ aa+ ++ n++ +++
tr|A0A1X7U3G5|A0A1X7U3G5_AMPQE 2 LDVFAGCGGLSEGFHQAGvADSCWAVEIDEPAAQAFRLNYSqTTVFT 48
79****************99********************9655554 PP
== domain 2 score: 83.8 bits; conditional E-value: 9.3e-27
S-GS--...-SEEEE---GGGTECTSE..E--TTSGGGHHHHHHHHHHHHH--SEEEEEEEGGGGGGCCSHHHHHHHHH CS
DNA_methylase 55 kkklpe..diDlLvgGfPCqpfSvaGk..qkgfedtrgtLffeiiriikekkPkvfllENVkgLlkhdkgktlkvilek 129
++lp+ d++lL+gG+PCq+fS ++ + +++L + + + + ++P++fllE V++ ++ +k+ +lk l
tr|A0A1X7U3G5|A0A1X7U3G5_AMPQE 104 GQSLPQkgDVELLCGGPPCQGFSGMNRfnSREYSQFKNSLVISYLSFCEYYRPQFFLLESVRNFVSFKKSMVLKLTLRC 182
446776557**************988744666667778***************************************** PP
HHHHTEEEEEEEEEGGGTT-SB--EEEEEEEEEGGG----------SS---GGG.....TSGGGTTS-EE...BTTTB- CS
DNA_methylase 130 leelGYevsykllnasdyGvpQnReRvfivgirkdlelnvlvkvkefrfpkkkdleasktlrdlleekse...ldeekt 205
l ++GY++++ +l+a +yGvpQ R+R +i++ +++l ++++ + f+ + + +++d++ e s + +t
tr|A0A1X7U3G5|A0A1X7U3G5_AMPQE 183 LVKMGYQCTFGVLQAGQYGVPQTRRRAIILAAAPGEKL-PHFPNPTHAFSPRV-CQLTVVVNDIKYEGSIrmdSAPYRT 259
*********************************99876.68888888888887.6899999999988655544444444 PP
-GGGSSSTT-EE--.......S---H..H CS
DNA_methylase 206 alsdklvekeekikkttkaseegypk..e 232
++ +++ +ik+ + + +y+
tr|A0A1X7U3G5|A0A1X7U3G5_AMPQE 260 ITVRDSMSDLPHIKNGSAVRSMNYNGepH 288
55555555555555554444444443343 PP
>> tr|A0A1X7V196|A0A1X7V196_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 62.4 0.0 3e-20 1.1e-16 1 120 [. 635 767 .. 635 782 .. 0.90
Alignments for each domain:
== domain 1 score: 62.4 bits; conditional E-value: 3e-20
-EEEEES-TT-HHHHHHHHTT..-EEEEEEE--TTTHHHHHHH-..-SEEEES-TTTS-GS--...-SEEEE---GGGT CS
DNA_methylase 1 lkfidLfaGiGGfrlgleaag..fecvaaseidkkaaktYeanfk.kvsigDitkidkkklpe.d.iDlLvgGfPCqpf 74
++++ Lf+GiG l l++ g +e+++aseid++a+k+ + +++ + g i+++++k+++ +Dl+ gG PC++
tr|A0A1X7V196|A0A1X7V196_AMPQE 635 MRVLGLFDGIGTGLLVLKELGinVEVYIASEIDPDAIKVSRIKHPeIIHVGAIEQVTEKEVRSwGpFDLVFGGSPCNDL 713
78999****************9999********************88899*********9997647************* PP
ECTS.EE--TTSGGGHHHHHHHHHHHHH-.......-SEEEEEEEGGGGGGCCS CS
DNA_methylase 75 SvaG.kqkgfedtrgtLffeiiriikekk.......PkvfllENVkgLlkhdkg 120
S+ ++kg+ d g+Lffe+ ri+ k P + l ENV + +dk+
tr|A0A1X7V196|A0A1X7V196_AMPQE 714 SIVNpARKGIYDGTGKLFFEFFRILSYAKpqpqderPFFWLYENVVSMRAPDKK 767
*98736*******************99886666666778999***999999885 PP
>> tr|A0A1X7UGK9|A0A1X7UGK9_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 52.7 0.0 2.7e-17 9.7e-14 252 333 .. 167 278 .. 6 280 .. 0.63
Alignments for each domain:
== domain 1 score: 52.7 bits; conditional E-value: 2.7e-17
-S-STT-......................-B-TTS---EEEETTEEE--T............................T CS
DNA_methylase 252 rksgrge......................klekelaeagklqknkerfkp...........................vi 281
+++++g+ + + v+
tr|A0A1X7UGK9|A0A1X7UGK9_AMPQE 167 HDKKNGRaknkslrgvcscatgqpcdssyR-------------------QymgplyhgayhiqaidtiiglgsmggfVL 226
222222222333333334444444333330...................144444444444444555555555555589 PP
TGGG--B-BHHHHHHHHT--TT-----SBHHHHHHHHTS--HHHHHHHHHHH CS
DNA_methylase 282 ekkriRrLtprEaarlqGfPddfefgskksaaykqiGnsVpvpvieaiakei 333
+++++ ++rE+ar qGfPd+f f ++ ++ +q+Gn+Vp+p+++ai+ ei
tr|A0A1X7UGK9|A0A1X7UGK9_AMPQE 227 HPEQHQVVSVRECARSQGFPDTFHFFGTILDKHRQVGNAVPPPLAKAIGLEI 278
************************************************9887 PP
>> tr|A0A1X7TJC1|A0A1X7TJC1_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 31.9 0.0 5.9e-11 2.1e-07 299 332 .. 2 39 .. 1 41 [. 0.87
Alignments for each domain:
== domain 1 score: 31.9 bits; conditional E-value: 5.9e-11
T--TT....-----SBHHHHHHHHTS--HHHHHHHHHH CS
DNA_methylase 299 GfPdd....fefgskksaaykqiGnsVpvpvieaiake 332
Gf ++ ++f++++++ay+q+Gn+V+vpv++a+a+
tr|A0A1X7TJC1|A0A1X7TJC1_AMPQE 2 GFQKSdgskWKFPVSDAQAYRQMGNAVVVPVVRALARL 39
666666667*************************9985 PP
>> tr|A0A1X7TED2|A0A1X7TED2_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.4 0.0 3e-06 0.011 2 70 .. 64 140 .. 63 141 .. 0.93
Alignments for each domain:
== domain 1 score: 16.4 bits; conditional E-value: 3e-06
EEEEES-TT-HHHHHHHHTT-EEEEEEE--TTTHHHHHHH-..........-SEEEES-TTTS-GS--.-SEEEE--- CS
DNA_methylase 2 kfidLfaGiGGfrlgleaagfecvaaseidkkaaktYeanfk.........kvsigDitkidkkklpediDlLvgGfP 70
++idL +G G + lg g e v a++id++++k+ + n + +v++ Di++id +k+ D ++ +P
tr|A0A1X7TED2|A0A1X7TED2_AMPQE 64 TVIDLGCGSGILGLGCLLLGAERVTAIDIDPNCVKLTQSNANdlgissdqlSVIQCDIKTIDTDKFDR-ADTVIMNPP 140
58********************************************9999999999999999999995.998887776 PP
>> tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.0 0.0 1.6e-05 0.059 2 70 .. 64 140 .. 63 141 .. 0.93
Alignments for each domain:
== domain 1 score: 14.0 bits; conditional E-value: 1.6e-05
EEEEES-TT-HHHHHHHHTT-EEEEEEE--TTTHHHHHHH-..........-SEEEES-TTTS-GS--.-SEEEE--- CS
DNA_methylase 2 kfidLfaGiGGfrlgleaagfecvaaseidkkaaktYeanfk.........kvsigDitkidkkklpediDlLvgGfP 70
+++dL +G G + lg g e v a++id++++k+ + n + +v++ Di++id +++ D ++ +P
tr|A0A1X7U0X0|A0A1X7U0X0_AMPQE 64 TVVDLGCGSGILGLGCLLLGAERVTAIDIDPNCVKLTQSNANdlgissdqlSVIQYDIKTIDTDQFDR-ADTVIMNPP 140
589*******************************************999999999*******99*995.998887776 PP
>> tr|A0A1X7T699|A0A1X7T699_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.4 0.0 2.5e-05 0.09 105 156 .. 20 71 .. 19 151 .. 0.78
Alignments for each domain:
== domain 1 score: 13.4 bits; conditional E-value: 2.5e-05
EEEEEEEGGGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEGGGTT-SB--EEE CS
DNA_methylase 105 vfllENVkgLlkhdkgktlkvilekleelGYevsykllnasdyGvpQnReRv 156
++ +E V L+++++++ ++++kle lGY+v ++++ s +vp R +
tr|A0A1X7T699|A0A1X7T699_AMPQE 20 FLHMEMVSYLVSSKEKEDQGELISKLEALGYGVGARMMERSCRDVPRFRTEL 71
788********************************99999999999888655 PP
>> tr|A0A1X7V411|A0A1X7V411_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.4 0.0 2.5e-05 0.09 105 156 .. 20 71 .. 19 151 .. 0.78
Alignments for each domain:
== domain 1 score: 13.4 bits; conditional E-value: 2.5e-05
EEEEEEEGGGGGGCCSHHHHHHHHHHHHHTEEEEEEEEEGGGTT-SB--EEE CS
DNA_methylase 105 vfllENVkgLlkhdkgktlkvilekleelGYevsykllnasdyGvpQnReRv 156
++ +E V L+++++++ ++++kle lGY+v ++++ s +vp R +
tr|A0A1X7V411|A0A1X7V411_AMPQE 20 FLHMEMVSYLVSSKEKEDQGELISKLEALGYGVGARMMERSCRDVPRFRTEL 71
788********************************99999999999888655 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (335 nodes)
Target sequences: 43435 (14716620 residues searched)
Passed MSV filter: 3056 (0.070358); expected 868.7 (0.02)
Passed bias filter: 1262 (0.0290549); expected 868.7 (0.02)
Passed Vit filter: 135 (0.00310809); expected 43.4 (0.001)
Passed Fwd filter: 15 (0.000345344); expected 0.4 (1e-05)
Initial search space (Z): 43435 [actual number of targets]
Domain search space (domZ): 12 [number of targets reported over threshold]
# CPU time: 0.56u 0.03s 00:00:00.59 Elapsed: 00:00:00.17
# Mc/sec: 29000.40
//
[ok]