# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/DNA_methylase.hmm.txt
# target sequence database:        proteomes/Tetrahymena_thermophila.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       DNA_methylase  [M=335]
Accession:   PF00145.17
Description: C-5 cytosine-specific DNA methylase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence Description
    ------- ------ -----    ------- ------ -----   ---- --  -------- -----------

   [No hits detected that satisfy reporting thresholds]


Domain annotation for each sequence (and alignments):

   [No targets detected that satisfy reporting thresholds]


Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (335 nodes)
Target sequences:                        26971  (16912921 residues searched)
Passed MSV filter:                     11589  (0.429684); expected 539.4 (0.02)
Passed bias filter:                      686  (0.0254347); expected 539.4 (0.02)
Passed Vit filter:                       355  (0.0131623); expected 27.0 (0.001)
Passed Fwd filter:                         3  (0.000111231); expected 0.3 (1e-05)
Initial search space (Z):              26971  [actual number of targets]
Domain search space  (domZ):               0  [number of targets reported over threshold]
# CPU time: 1.26u 0.03s 00:00:01.29 Elapsed: 00:00:00.41
# Mc/sec: 13819.09
//
[ok]