# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/DREV.hmm.txt # target sequence database: proteomes/Branchiostoma_floridae.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: DREV [M=265] Accession: PF05219.11 Description: DREV methyltransferase Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-89 300.3 0.0 1.8e-89 300.0 0.0 1.0 1 tr|C3ZBH4|C3ZBH4_BRAFL Uncharacterized protein OS=Branchiost 4e-14 53.0 0.0 0.003 17.4 0.0 3.2 3 tr|C3Z583|C3Z583_BRAFL Uncharacterized protein OS=Branchiost 0.00032 20.5 0.0 0.00046 20.0 0.0 1.2 1 tr|C3YGA4|C3YGA4_BRAFL Uncharacterized protein OS=Branchiost 0.00056 19.7 0.0 0.0019 18.0 0.0 1.7 2 tr|C3ZHD7|C3ZHD7_BRAFL Uncharacterized protein OS=Branchiost 0.0028 17.5 0.0 0.0044 16.8 0.0 1.3 1 tr|C3XZH6|C3XZH6_BRAFL Uncharacterized protein OS=Branchiost 0.0052 16.6 0.0 0.0077 16.0 0.0 1.2 1 tr|C3YM50|C3YM50_BRAFL rRNA adenine N(6)-methyltransferase O 0.0091 15.8 0.0 0.016 15.0 0.0 1.3 1 tr|C3Y0I3|C3Y0I3_BRAFL Uncharacterized protein OS=Branchiost ------ inclusion threshold ------ 0.011 15.5 0.0 0.02 14.7 0.0 1.4 1 tr|C3YBS7|C3YBS7_BRAFL Uncharacterized protein OS=Branchiost 0.056 13.2 0.0 0.17 11.6 0.0 1.6 2 tr|C3ZB51|C3ZB51_BRAFL Uncharacterized protein OS=Branchiost 0.066 13.0 0.2 8.6 6.0 0.0 2.5 3 tr|C3ZB63|C3ZB63_BRAFL Uncharacterized protein OS=Branchiost 0.084 12.6 0.0 0.2 11.4 0.0 1.6 1 tr|C3YMM3|C3YMM3_BRAFL Uncharacterized protein OS=Branchiost 0.09 12.5 0.0 0.12 12.2 0.0 1.1 1 tr|C3YW96|C3YW96_BRAFL Uncharacterized protein (Fragment) OS 0.11 12.2 0.0 0.15 11.8 0.0 1.1 1 tr|C3YJJ2|C3YJJ2_BRAFL Uncharacterized protein OS=Branchiost 0.12 12.1 0.0 0.19 11.4 0.0 1.2 1 tr|C3XVW9|C3XVW9_BRAFL Uncharacterized protein OS=Branchiost 0.16 11.7 0.0 1.1 8.9 0.0 1.9 2 tr|C3Z3W4|C3Z3W4_BRAFL Uncharacterized protein OS=Branchiost 0.26 11.0 0.0 0.32 10.7 0.0 1.1 1 tr|C3ZBD1|C3ZBD1_BRAFL Uncharacterized protein OS=Branchiost Domain annotation for each sequence (and alignments): >> tr|C3ZBH4|C3ZBH4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_260172 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 300.0 0.0 9.9e-93 1.8e-89 1 265 [] 37 299 .. 37 299 .. 0.98 Alignments for each domain: == domain 1 score: 300.0 bits; conditional E-value: 9.9e-93 DREV 1 Wyvlnre.lseslqalfvaslpdaetqsflenskklsanlfiqlyhalassilslfmsktdinGllgrGsmfvlseeqfrkllaiek 86 Wy+++ + lse+lq ++ +++ d+et +fl+ s+++s ++f+q++h+++s++ls+f+s t+inG lgrGsmfv+s++ f kl+ i tr|C3ZBH4|C3ZBH4_BRAFL 37 WYTCDVSlLSETLQPKYLPLHFDTETEEFLQGSREKSDWVFTQIFHSVVSTLLSMFVSVTSINGWLGRGSMFVFSQQHFYKLMRIA- 122 *******99***************************************************************************99. PP DREV 87 espasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkynvlsalelq..etdvkldlilclnlldrcfdplkll 171 ++++ ++lldlGaGdG++t++++ +f+ev+ te s mr+rl+ ++y++l + e+ ++++ +dli+clnlldrc++p +l tr|C3ZBH4|C3ZBH4_BRAFL 123 ----PGWQAERLLDLGAGDGNVTRIMSGHFQEVFVTEQSPPMRERLQERGYRLLDIEEWPtpQSGLTYDLISCLNLLDRCDKPRSVL 205 ....9*****************************************************9623589********************** PP DREV 172 edirsalepngrvivalvlPvshyvetntgksekpsellevkGrsyeeevarli.evlkkagfeveaftrlPylceGdlnnsfyyld 257 edir l p+g+ i+a+vlP+s+ ve + k pse+l v+G+ +e ++++++ +vl ++gfeve+f rlPylceGdl++ +y+l+ tr|C3ZBH4|C3ZBH4_BRAFL 206 EDIRRSLSPDGHLILAVVLPFSPCVESGS-KLVDPSEVLPVEGKGWELQANSFVeQVLTPSGFEVETFSRLPYLCEGDLYHPYYILH 291 **************************988.************************88******************************* PP DREV 258 daifvlkk 265 da+fvl++ tr|C3ZBH4|C3ZBH4_BRAFL 292 DAVFVLRP 299 *****986 PP >> tr|C3Z583|C3Z583_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_130336 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.1 0.0 8.1e-06 0.014 97 196 .. 79 184 .. 62 196 .. 0.80 2 ! 17.4 0.0 1.7e-06 0.003 95 160 .. 323 394 .. 303 423 .. 0.76 3 ! 16.6 0.0 3e-06 0.0053 97 160 .. 553 622 .. 530 649 .. 0.79 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 8.1e-06 DREV 97 klldlGaGdGeitkrvaptfeevyatelset......mrdrlkkkkynvlsalelqetdvkldlilclnlldrcfdplklledirsa 177 + +d+G G G+ t ++ap+f++v ++se +++l+ +y+v +a ++ d dl++c fd k+ +++ + tr|C3Z583|C3Z583_BRAFL 79 QAVDIGCGSGQSTVILAPHFQRVTGIDVSESqvaiaaAQNKLSNVQYRVGGAEHIPLPDSSVDLVTCGT-SAHWFDFPKFHKELDRV 164 568*******************999988875222222579************999999*********65.45677888999999999 PP DREV 178 lep.ngrvivalvlPvshyv 196 l+p + +i + + + y tr|C3Z583|C3Z583_BRAFL 165 LRPlGCLAIYCYSINYLSYK 184 99977888888777777775 PP == domain 2 score: 17.4 bits; conditional E-value: 1.7e-06 DREV 95 dkklldlGaGdGeitkrvaptfeevyatelse...tm...rdrlkkkkynvlsalelqetdvkldlilclnl 160 + +d+G G G+ ++++ap+f++v ++se m ++l+ +y+v a + d dl++cl tr|C3Z583|C3Z583_BRAFL 323 LLRAVDIGCGSGQSSEILAPHFQHVLGIDVSEpqiAMasaNNKLNNVEYRVAPAESIPVPDGSVDLVMCLQA 394 45789*******************9999999733334222589999*******9999999*********975 PP == domain 3 score: 16.6 bits; conditional E-value: 3e-06 DREV 97 klldlGaGdGeitkrvaptfeevyatelse...tm...rdrlkkkkynvlsalelqetdvkldlilclnl 160 + +d+G G G+ ++++ap+f++v ++se m ++l+ +y+v a + d dl++cl+ tr|C3Z583|C3Z583_BRAFL 553 HAVDIGCGSGQSSEILAPHFQHVLGIDVSEpqiAMasaNNKLNNVEYRVAPAESIPVPDGSVDLVMCLEA 622 568*******************9999999733334222589999*******99999999********975 PP >> tr|C3YGA4|C3YGA4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_92848 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.0 0.0 2.6e-07 0.00046 97 200 .. 61 170 .. 44 187 .. 0.83 Alignments for each domain: == domain 1 score: 20.0 bits; conditional E-value: 2.6e-07 DREV 97 klldlGaGdGeitkrvaptfeevyatelse......tmrdrlkkkkynvlsalelqetdvkldlilclnlldrcfdplklledirsa 177 + +dlG G G+ t+ +ap+f++v ++s t ++ + +y v sa el d +dli+c fd k+ +++ + tr|C3YGA4|C3YGA4_BRAFL 61 HAVDLGCGSGQTTELLAPHFQRVTGMDVSDaqievaTANNNYSNIQYMVGSAEELPFPDASIDLITCATA-AHWFDFPKFHKEVNRV 146 568*******************9998888622222255678899999999******9**********876.567888899******* PP DREV 178 lep.ngrvivalvlPvshyvetnt 200 l p + ++ + + + y e t tr|C3YGA4|C3YGA4_BRAFL 147 LTPlGCLAVYCYGMSYLSYSEDCT 170 ***889999999999999999876 PP >> tr|C3ZHD7|C3ZHD7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_99360 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.0 0.0 1.1e-06 0.0019 82 185 .. 62 174 .. 50 192 .. 0.70 2 ? -1.3 0.0 0.82 1.5e+03 148 159 .. 223 234 .. 209 251 .. 0.73 Alignments for each domain: == domain 1 score: 18.0 bits; conditional E-value: 1.1e-06 DREV 82 laiekespasdqedkklldlGaGdGeitkrvapt..feevyatelsetmrdrlkkk......kynvlsale.lqetdv...kldlil 156 l+ ++++++ e ++ld+G G Gei+k va++ ++ v a ++s m + +k y++ a + l+ v + + tr|C3ZHD7|C3ZHD7_BRAFL 62 LMHQNFEWQ---EGDTVLDVGCGTGEISKYVAQQhgVKSVEAFDVSPDMVRHARKNsphekvAYHIADARDeLAMKLVweeSFRKAV 145 444445554...5789***************97634788**********88766541111115666666554443322222455678 PP DREV 157 clnlldrcfdplklledirsalepngrvi 185 c+n+l + ++++++ s+l+ g+ + tr|C3ZHD7|C3ZHD7_BRAFL 146 CFNVLHWIEEKERVIRNVFSTLKQGGEFL 174 99999999999999988888888777665 PP == domain 2 score: -1.3 bits; conditional E-value: 0.82 DREV 148 tdvkldlilcln 159 dv +++i+c+n tr|C3ZHD7|C3ZHD7_BRAFL 223 EDVGFEVITCVN 234 477788888887 PP >> tr|C3XZH6|C3XZH6_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_65649 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 0.0 2.4e-06 0.0044 95 236 .. 34 192 .. 15 198 .. 0.71 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 2.4e-06 DREV 95 dkklldlGaGdGeitkrvap..tfeevyatelsetmrd......rlkkkkynvlsale...lqetdv..kldlilclnlldrcfdpl 168 +ld+G G Gei++++a+ + +v ++s+ m + +k ++vl + + + d k+ +++ + + tr|C3XZH6|C3XZH6_BRAFL 34 GDVVLDVGCGTGEIARHIADrkEVAKVVGLDISKDMVNfatsnnTAEKASFHVLDIQDesgI-REDWrgKFTKAVSFHTVHWIPNKE 119 4569**************86225778********9975222222567889****99984422.234411556666666666667777 PP DREV 169 klledirsalepngrvivalvlPvshy.vetntgksekpsellevkG.rsye...eevarlievlkkagfeve 236 ++l +++ le g+ + l v v ++ k +e+l + ye +va + ++l+++gfev tr|C3XZH6|C3XZH6_BRAFL 120 RFLANVHVCLEKGGELLFNLFAGVPAIkVARDIKHHPKWREYLTDYTlQLYEwpkGDVAGMSHLLEECGFEVV 192 89*************99999865543314444458889999998777666653336899999*******9996 PP >> tr|C3YM50|C3YM50_BRAFL rRNA adenine N(6)-methyltransferase OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_225323 PE # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.0 0.0 4.3e-06 0.0077 89 135 .. 44 90 .. 22 118 .. 0.84 Alignments for each domain: == domain 1 score: 16.0 bits; conditional E-value: 4.3e-06 DREV 89 pasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkk 135 a+ + + ++l++G G G++t ++ + +++v a e+ ++ l+k+ tr|C3YM50|C3YM50_BRAFL 44 KAALRPTDTVLEIGPGTGNLTMKMIDRVKKVIACEIDPRLVAELQKR 90 344456789***********************************997 PP >> tr|C3Y0I3|C3Y0I3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_92966 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.0 0.0 8.8e-06 0.016 98 183 .. 50 142 .. 36 148 .. 0.71 Alignments for each domain: == domain 1 score: 15.0 bits; conditional E-value: 8.8e-06 DREV 98 lldlGaGdGeitkrvap.tfeevyatelsetmrdrlkkkkynvlsal....e..lqetdvkldli.lclnlldrcfdplklledirs 176 ldlG G+G i+k +++ +e +y + se+m ++ + +v + e l d ldl+ +cl l d l+ ++s tr|C3Y0I3|C3Y0I3_BRAFL 50 ALDLGCGKGYISKYLNKdIVETLYQCDTSEKMLEHATNRPSEVPTLTfqadEefLPCKDNSLDLVvSCLSL-HWVNDLPGCLRQVWS 135 69***********997526888***********99998888775433111122444567788876156655.555555556788999 PP DREV 177 alepngr 183 al+p+g tr|C3Y0I3|C3Y0I3_BRAFL 136 ALKPDGC 142 9999775 PP >> tr|C3YBS7|C3YBS7_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_67676 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.7 0.0 1.1e-05 0.02 96 211 .. 34 163 .. 12 200 .. 0.64 Alignments for each domain: == domain 1 score: 14.7 bits; conditional E-value: 1.1e-05 DREV 96 kklldlGaGdGeitkrva..ptfeevyatelsetmr......drlkkkkynvlsalelq....etdvkldlilclnlldrcfdplkl 170 ++ld G G Gei + ++ p + v a ++s + +y+v + ++ e + + +cl +l d tr|C3YBS7|C3YBS7_BRAFL 34 DTVLDAGCGTGEICRYMSqqPGVASVQAFDVSAGFVsyanqnNSAPNVRYDVADVSDIStykpEWKGGFSKAVCLAVLHWLQDKEAA 120 68***************83355888777777765541110012334567888766664411112234588999************** PP DREV 171 ledirsalepngrvivalvlPvshyvetnt..gksekpselle 211 l+ i+s l+++g+++++ s + t ++ k +++l tr|C3YBS7|C3YBS7_BRAFL 121 LKAIHSCLRSRGEILLSCDTEDSSFYRTSHnmASHPKWQPYLG 163 ***************9976655444433221356666666664 PP >> tr|C3ZB51|C3ZB51_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_68483 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.6 0.0 9.3e-05 0.17 91 149 .. 91 148 .. 82 161 .. 0.82 2 ? -1.6 0.0 1 1.8e+03 66 133 .. 188 253 .. 179 258 .. 0.66 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 9.3e-05 DREV 91 sdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkynvlsalelqetd 149 +d + k++l+lGaG G t +a + ++v a + e +++ + + + l+++++ ++d tr|C3ZB51|C3ZB51_BRAFL 91 PDLKGKRVLELGAGIGRFTPSLARQADHVTAVDFMESFIKKNEEAN-RHLGNINFLQAD 148 78899****************************9999998876655.556666644444 PP == domain 2 score: -1.6 bits; conditional E-value: 1 DREV 66 grGsmfvlseeqfrkllaiekespasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlk 133 G f + e f+k k s+++ + + d a +t+ + +ee +a + +t ++r k tr|C3ZB51|C3ZB51_BRAFL 188 TEGGYFFFRESCFQKSGNK-KRSFNPTF-YRCPADYSAIFSAVTQDARYVYEEQFAGRAVKTYIKRKK 253 5677777888888776443.35566633.333456777777778888888888888888777777755 PP >> tr|C3ZB63|C3ZB63_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_118790 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.0 0.0 0.0048 8.6 90 130 .. 55 95 .. 26 113 .. 0.85 2 ? 4.2 0.0 0.017 31 93 130 .. 294 332 .. 283 395 .. 0.88 3 ? -3.1 0.0 3 5.4e+03 202 246 .. 445 491 .. 432 501 .. 0.60 Alignments for each domain: == domain 1 score: 6.0 bits; conditional E-value: 0.0048 DREV 90 asdqedkklldlGaGdGeitkrvaptfeevyatelsetmrd 130 ++ e k++l+lGaG G t +a++ ++v a + e + tr|C3ZB63|C3ZB63_BRAFL 55 LPGIEGKTILELGAGIGRYTAPLAQQAKHVTAVDFMESFIR 95 478899************************99988776665 PP == domain 2 score: 4.2 bits; conditional E-value: 0.017 DREV 93 qedkklldlGaGdGeitkrvaptfee.vyatelsetmrd 130 q d+++ld+G G G +a+ f v a +ls++m++ tr|C3ZB63|C3ZB63_BRAFL 294 QPDQHVLDVGCGIGGGDFYMAKKFGAvVTAMDLSTNMIE 332 45789*********999*****998846799*****987 PP == domain 3 score: -3.1 bits; conditional E-value: 3 DREV 202 ksekpsellevkGrsyeeevarlievlkkagfe..veaftrlPylce 246 + ++ ++l+ + + e + +++i+ + + +f+ ve + + ce tr|C3ZB63|C3ZB63_BRAFL 445 RTQQFTDILNREVARTEANKEEFIKEFSEEDFRyiVEGWKAKLHRCE 491 55566666776666666666666655554443222666766656665 PP >> tr|C3YMM3|C3YMM3_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_98019 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.4 0.0 0.00011 0.2 94 210 .. 32 162 .. 19 201 .. 0.62 Alignments for each domain: == domain 1 score: 11.4 bits; conditional E-value: 0.00011 DREV 94 edkklldlGaGdGeitkrva..ptfeevyatelsetmrdrlkkkk......ynvlsalelq....etdvkldlilclnlldrcfdpl 168 e ++ld G G Gei k ++ p + v ++s ++++ y+v + + e + + + ++ +l d tr|C3YMM3|C3YMM3_BRAFL 32 EGDTVLDAGCGTGEICKFISqqPGVASVLGFDVSPDFVSYASQHNsaanilYHVADISDAStikpEWQGSFSKVISFFVLHWVKDKT 118 4679*************9972256888777777766655444433222223666555443311112235688999999********* PP DREV 169 klledirsalepngrvivalvlPvshyvetnt..gksekpsell 210 l+ ++s l+p g+v++ l ++ ++t+ +++k ++++ tr|C3YMM3|C3YMM3_BRAFL 119 AALKALHSCLKPGGEVLLILGTDENKSIQTKLkmTEHHKWKPYF 162 ****************9988776666666543234455555554 PP >> tr|C3YW96|C3YW96_BRAFL Uncharacterized protein (Fragment) OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_242773 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.2 0.0 6.5e-05 0.12 90 215 .. 40 174 .. 31 178 .] 0.83 Alignments for each domain: == domain 1 score: 12.2 bits; conditional E-value: 6.5e-05 DREV 90 asdqedkklldlGaGdGeitkrv.aptfeevyatelsetmrdrlkkkk..ynvls......alelqetdvkldlilclnlldrcfdp 167 s+ + ++ld+ aG G+ + + + + ++ a + s+ m d + ++ ++ + l++q+ ++++d i+c + + + tr|C3YW96|C3YW96_BRAFL 40 LSGNKAARILDVAAGTGQCAMELiKLGYTNLDAIDGSQGMLDIAQSRNlyHRYICdflgprRLDIQDGKYHYDAIACCGAFSQGHMK 126 578999************987651567999**********9877665532344431222335799**************99999999 PP DREV 168 lklledirsalepngrvivalvlPvshyvetntgksekpsellevkGr 215 + ++ + +p g + +a+ + ve k e+ le kG tr|C3YW96|C3YW96_BRAFL 127 DDCFPELIRIVKPGGLICIAMREEFLRTVEAYKDKLEPAMTTLEDKGS 174 9999999999***********************999999999999993 PP >> tr|C3YJJ2|C3YJJ2_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_93226 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 8.5e-05 0.15 89 136 .. 64 112 .. 50 143 .. 0.82 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 8.5e-05 DREV 89 pasdqedkklldlGaGdGeitkrvapt.feevyatelsetmrdrlkkkk 136 a+d+ + ++ld+ aG G + + + ++ f ++ a + s++m d k k+ tr|C3YJJ2|C3YJJ2_BRAFL 64 AAADRSQIRILDVAAGTGLVGEELHKMgFTNMDAVDCSQKMLDEAKVKN 112 4678999***************9987559**************999887 PP >> tr|C3XVW9|C3XVW9_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_106799 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.4 0.0 0.00011 0.19 81 130 .. 477 526 .. 445 547 .. 0.76 Alignments for each domain: == domain 1 score: 11.4 bits; conditional E-value: 0.00011 DREV 81 llaiekespasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrd 130 +l + ++ +d ++ld+ G G i +a+++++v el ++ + tr|C3XVW9|C3XVW9_BRAFL 477 VLYSKVADWCDFTKDSTVLDVCCGTGTIGLTLAKHVKKVIGVELCQQAVE 526 344445567777799****************************9987655 PP >> tr|C3Z3W4|C3Z3W4_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_99768 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.5 0.0 0.24 4.3e+02 95 144 .. 88 135 .. 77 159 .. 0.78 2 ? 8.9 0.0 0.00064 1.1 151 215 .. 177 238 .. 168 267 .. 0.83 Alignments for each domain: == domain 1 score: 0.5 bits; conditional E-value: 0.24 DREV 95 dkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkynvlsale 144 + + ld+G G + +a + ev + s+ +++ +v ++++ tr|C3Z3W4|C3Z3W4_BRAFL 88 PSRALDIGCATGRSSFELARRYREVVGIDFSHSFVAACEQL--KVAGTID 135 5789********************99999999887765544..3445554 PP == domain 2 score: 8.9 bits; conditional E-value: 0.00064 DREV 151 kldlilclnlldrcfdplklledirsalepngrvivalvlPvshyvetntgksekpsellevkGr 215 ++ +l+ nl+ r p+ +l+ ++s +p g + + P+s ve+ + k + + + + +G+ tr|C3Z3W4|C3Z3W4_BRAFL 177 QFGCVLAANLICRLPTPFDFLNRLKSLVAPGGVLV--ITSPYSWLVEFTP-KNTWLGGYKDKDGK 238 68899*************************98655..568********99.77666666666664 PP >> tr|C3ZBD1|C3ZBD1_BRAFL Uncharacterized protein OS=Branchiostoma floridae OX=7739 GN=BRAFLDRAFT_65009 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.7 0.0 0.00018 0.32 92 159 .. 62 136 .. 52 174 .. 0.73 Alignments for each domain: == domain 1 score: 10.7 bits; conditional E-value: 0.00018 DREV 92 dqedkklldlGaGdGeitkrvap.tfeevyatelsetmrdrlkkkk.yn.....vlsalelqetdvkldlilcln 159 d++d ++ld aG G + + +++ f+++ a ++ ++m d k k+ y+ l+ + lq +d +d + c tr|C3ZBD1|C3ZBD1_BRAFL 62 DRKDARILDAAAGTGLVGEELRKlEFSNIDALDANKEMLDIAKTKNvYRnliqdFLGPNRLQVADDTYDALCCAG 136 7899****************99846**************998877645421111345566777777777777755 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (265 nodes) Target sequences: 28542 (13248087 residues searched) Passed MSV filter: 530 (0.0185691); expected 570.8 (0.02) Passed bias filter: 447 (0.0156611); expected 570.8 (0.02) Passed Vit filter: 60 (0.00210217); expected 28.5 (0.001) Passed Fwd filter: 16 (0.000560577); expected 0.3 (1e-05) Initial search space (Z): 28542 [actual number of targets] Domain search space (domZ): 16 [number of targets reported over threshold] # CPU time: 0.25u 0.01s 00:00:00.26 Elapsed: 00:00:00.09 # Mc/sec: 39008.26 // [ok]