# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/DREV.hmm.txt # target sequence database: proteomes/Macaca_mulatta.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: DREV [M=265] Accession: PF05219.11 Description: DREV methyltransferase Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.2e-140 464.6 0.1 9.5e-140 464.4 0.1 1.0 1 tr|H9FV79|H9FV79_MACMU Methyltransferase like 9 OS=Maca 0.0089 15.4 0.0 0.019 14.3 0.0 1.5 1 tr|G7MS35|G7MS35_MACMU Protein arginine methyltransfera ------ inclusion threshold ------ 0.11 11.8 0.0 0.17 11.2 0.0 1.3 1 tr|A0A1D5QW44|A0A1D5QW44_MACMU Uncharacterized protein OS=Macac 0.16 11.3 0.0 0.74 9.1 0.0 2.0 2 tr|F7FM77|F7FM77_MACMU Coactivator associated arginine 0.18 11.1 0.0 0.25 10.6 0.0 1.2 1 tr|F6X6T3|F6X6T3_MACMU Methyltransferase like 7B OS=Mac 0.19 11.1 0.0 0.29 10.5 0.0 1.2 1 tr|F7H1A9|F7H1A9_MACMU Protein arginine N-methyltransfe Domain annotation for each sequence (and alignments): >> tr|H9FV79|H9FV79_MACMU Methyltransferase like 9 OS=Macaca mulatta OX=9544 GN=METTL9 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 464.4 0.1 2.7e-143 9.5e-140 1 265 [] 56 317 .. 56 317 .. 1.00 Alignments for each domain: == domain 1 score: 464.4 bits; conditional E-value: 2.7e-143 DREV 1 Wyvlnre.lseslqalfvaslpdaetqsflenskklsanlfiqlyhalassilslfmsktdinGllgrGsmfvlseeqfrkllaiek 86 Wyv+nre l+eslqa+fv+s++d++tq+fl+ns+++s++lfiqlyh+++ss++slfms+t+inGllgrGsmfv+s++qf++ll+i+ tr|H9FV79|H9FV79_MACMU 56 WYVCNREkLCESLQAVFVQSYLDQGTQIFLNNSIEKSGWLFIQLYHSFVSSVFSLFMSRTSINGLLGRGSMFVFSPDQFQRLLKIN- 141 *************************************************************************************9. PP DREV 87 espasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkynvlsalelqetdvkldlilclnlldrcfdplklled 173 +d+++++lldlGaGdGe+tk+++p+fee+yatelsetm+++l+kkky+vl+++e+q+t++++d+i+clnlldrc++pl+ll+d tr|H9FV79|H9FV79_MACMU 142 ----PDWKTHRLLDLGAGDGEVTKIMSPHFEEIYATELSETMIWQLQKKKYRVLGINEWQNTGFQYDVISCLNLLDRCDQPLTLLKD 224 ....9********************************************************************************** PP DREV 174 irsalep.ngrvivalvlPvshyvetntgksekpsellevkGrsyeeevarlievlkkagfeveaftrlPylceGdlnnsfyyldda 259 irs+lep +grvi+alvlP+++yve+++gk+ekpse+le+kG+++ee+v++l+ev++kagf++eaftrlPylceGd++n++y+ldda tr|H9FV79|H9FV79_MACMU 225 IRSVLEPtRGRVILALVLPFHPYVENVGGKWEKPSEILEIKGQNWEEQVNSLPEVFRKAGFVIEAFTRLPYLCEGDMYNDYYVLDDA 311 *******9******************************************************************************* PP DREV 260 ifvlkk 265 +fvlk+ tr|H9FV79|H9FV79_MACMU 312 VFVLKP 317 ****97 PP >> tr|G7MS35|G7MS35_MACMU Protein arginine methyltransferase 9 OS=Macaca mulatta OX=9544 GN=PRMT10 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.3 0.0 5.4e-06 0.019 85 130 .. 168 214 .. 145 232 .. 0.78 Alignments for each domain: == domain 1 score: 14.3 bits; conditional E-value: 5.4e-06 DREV 85 ekespasdqedkklldlGaGdGeitkrvaptfee.vyatelsetmrd 130 + a ++ +ld+GaG G ++ ++ + vya els+tm + tr|G7MS35|G7MS35_MACMU 168 AAIQKAVCLGSRSVLDIGAGTGILSMFAKKAGAHsVYACELSKTMYE 214 4466666677899***********99988776656**********75 PP >> tr|A0A1D5QW44|A0A1D5QW44_MACMU Uncharacterized protein OS=Macaca mulatta OX=9544 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.2 0.0 4.8e-05 0.17 53 130 .. 44 123 .. 9 134 .. 0.82 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 4.8e-05 DREV 53 slfmsktdinGllgrGsmfvlseeqfrkllaiekespasdqedkklldlGaGdGeitkrv..aptfeevyatelsetmr 129 lf skt n l+ G + + f l ++ + s +++k+l +G GdG + + v p +e v e+ e ++ tr|A0A1D5QW44|A0A1D5QW44_MACMU 44 RLFRSKTYGNVLVLDGVIQCTERDEFSYLEMMANLPLCSHPNPRKVLIMGGGDGGVLHEVvkHPSLESVVQCEIDEDVI 122 5789*************************9999999*******************998872346688899999888776 PP DREV 130 d 130 + tr|A0A1D5QW44|A0A1D5QW44_MACMU 123 Q 123 5 PP >> tr|F7FM77|F7FM77_MACMU Coactivator associated arginine methyltransferase 1 OS=Macaca mulatta OX=9544 GN=CARM1 PE=3 S # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.8 0.0 0.44 1.5e+03 96 113 .. 36 53 .. 29 61 .. 0.85 2 ? 9.1 0.0 0.00021 0.74 88 127 .. 179 219 .. 162 235 .. 0.82 Alignments for each domain: == domain 1 score: -1.8 bits; conditional E-value: 0.44 DREV 96 kklldlGaGdGeitkrva 113 +ll +G +Gei ++ + tr|F7FM77|F7FM77_MACMU 36 ARLLTIGDANGEIQRHAE 53 689**********99865 PP == domain 2 score: 9.1 bits; conditional E-value: 0.00021 DREV 88 spasdqedkklldlGaGdGeitkrvapt.feevyatelset 127 + +d++dk +ld+G G G ++ a+ ++ya e+s+ tr|F7FM77|F7FM77_MACMU 179 QNHTDFKDKIVLDVGCGSGILSFFAAQAgARKIYAVEASTM 219 567899**************998877652678*****9964 PP >> tr|F6X6T3|F6X6T3_MACMU Methyltransferase like 7B OS=Macaca mulatta OX=9544 GN=METTL7B PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 7.1e-05 0.25 125 182 .. 110 168 .. 55 184 .. 0.76 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 7.1e-05 DREV 125 setmrdrlkkkkynvlsale.lqetdvkldlilclnlldrcfdplklledirsalepng 182 s +l+ ++ v + q +d +d+++c +l +p k+l++++ +l+p g tr|F6X6T3|F6X6T3_MACMU 110 SMAENRHLQYERFVVAPGEDmRQLADGSMDVVVCTLVLCSVQSPRKVLQEVQRVLRPGG 168 333356799999999998885677899*****************************976 PP >> tr|F7H1A9|F7H1A9_MACMU Protein arginine N-methyltransferase 6 OS=Macaca mulatta OX=9544 GN=PRMT6 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.0 8.1e-05 0.29 89 138 .. 78 127 .. 71 132 .. 0.77 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 8.1e-05 DREV 89 pasdqedkklldlGaGdGeitkrvapt.feevyatelsetmrdrlkkkkyn 138 +a+ + k++ld+GaG G ++ a+ +vya e+s ++ + ++n tr|F7H1A9|F7H1A9_MACMU 78 WAA-LRGKTVLDVGAGTGILSIFCAQAgARRVYAVEASAIWQQAREVVRFN 127 555.6789************99888762567*******8776665555555 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (265 nodes) Target sequences: 21211 (10888574 residues searched) Passed MSV filter: 411 (0.0193767); expected 424.2 (0.02) Passed bias filter: 310 (0.0146151); expected 424.2 (0.02) Passed Vit filter: 35 (0.00165009); expected 21.2 (0.001) Passed Fwd filter: 6 (0.000282872); expected 0.2 (1e-05) Initial search space (Z): 21211 [actual number of targets] Domain search space (domZ): 6 [number of targets reported over threshold] # CPU time: 0.20u 0.01s 00:00:00.21 Elapsed: 00:00:00.09 # Mc/sec: 32060.80 // [ok]