# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/DREV.hmm.txt
# target sequence database: proteomes/Monosiga_brevicollis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: DREV [M=265]
Accession: PF05219.11
Description: DREV methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.6e-48 162.4 0.0 6.3e-48 162.2 0.0 1.0 1 tr|A9UUG3|A9UUG3_MONBE Predicted protein (Fragment) OS=Monos
7.5e-05 21.0 0.0 0.00011 20.5 0.0 1.3 1 tr|A9VD27|A9VD27_MONBE Predicted protein OS=Monosiga brevico
0.0017 16.5 0.0 0.0026 16.0 0.0 1.2 1 tr|A9UXY5|A9UXY5_MONBE Predicted protein OS=Monosiga brevico
------ inclusion threshold ------
0.013 13.6 0.0 0.018 13.2 0.0 1.3 1 tr|A9V2V4|A9V2V4_MONBE Predicted protein OS=Monosiga brevico
0.077 11.1 0.0 0.14 10.3 0.0 1.3 1 tr|A9V663|A9V663_MONBE rRNA adenine N(6)-methyltransferase O
Domain annotation for each sequence (and alignments):
>> tr|A9UUG3|A9UUG3_MONBE Predicted protein (Fragment) OS=Monosiga brevicollis OX=81824 GN=15704 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 162.2 0.0 3.4e-51 6.3e-48 98 262 .. 1 166 [. 1 169 [. 0.96
Alignments for each domain:
== domain 1 score: 162.2 bits; conditional E-value: 3.4e-51
DREV 98 lldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkky.nvlsalelqetdvkldlilclnlldrcfdplklledirsalepngr 183
lld+GaGdG +t++++p f++v +te mr+rl++++y +v + + d +d+i+cln+ldrc+ p +ll+d+++ l+p g+
tr|A9UUG3|A9UUG3_MONBE 1 LLDIGAGDGGVTEQLRPLFDQVETTETNRVMRWRLSRRGYlRVHDEASWMAGDQLYDVIACLNVLDRCDRPKTLLQDMYKKLRPGGQ 87
79*************************************967888889*************************************** PP
DREV 184 vivalvlPvshyvetntgksekpsellevkGrsyeeevarlie.vlkkagfeveaftrlPylceGdlnnsfyylddaifv 262
++al lP+ ++v+ + ++ p e l ++ +ye e+++li+ vl +agf+v++ r+PylceGd ++ fy+l+d+++v
tr|A9UUG3|A9UUG3_MONBE 88 LLLALALPYRPFVDGGS-GWTMPTENLGIRDSTYEAEASKLINlVLTPAGFTVKSISRAPYLCEGDQYKPFYILTDLLVV 166
**************988.69999*******************63799******************************998 PP
>> tr|A9VD27|A9VD27_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=34649 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 20.5 0.0 5.9e-08 0.00011 87 138 .. 43 94 .. 18 148 .. 0.79
Alignments for each domain:
== domain 1 score: 20.5 bits; conditional E-value: 5.9e-08
DREV 87 espasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkyn 138
++ d+++ +l++G G G ++ +a +++v a++ s m+ +lk ++ +
tr|A9VD27|A9VD27_MONBE 43 NKRGLDWKQLSVLEVGCGAGVLSLELAARVKDVLAADPSAAMIAKLKERQAK 94
344569****************************************988654 PP
>> tr|A9UXY5|A9UXY5_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=36815 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.0 0.0 1.4e-06 0.0026 96 186 .. 127 227 .. 115 253 .. 0.78
Alignments for each domain:
== domain 1 score: 16.0 bits; conditional E-value: 1.4e-06
DREV 96 kklldlGaGdGeitkrvaptfee..vyatelset....mrdrlkkkkynvlsale....lqetdvkldlilclnlldrcfdplklle 172
++ldlG G G +t +a+++ + +++ s t + d+ + k+y+ +++ e++ ++d ++++++++ + + kl++
tr|A9UXY5|A9UXY5_MONBE 127 LRILDLGCGWGSLTLWLAEHYPKatIHSISNSRTqkqyIDDQCRAKGYKNVTVFTsdinDFEAEGNYDRVMSIEMFEHMKNYEKLMN 213
699*****************9887777777776622224468899999877754311113347789********************* PP
DREV 173 dirsalepngrviv 186
i + l+p g v
tr|A9UXY5|A9UXY5_MONBE 214 KITNWLKPGGFLFV 227
*****999886665 PP
>> tr|A9V2V4|A9V2V4_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=9348 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.2 0.0 9.7e-06 0.018 84 119 .. 42 77 .. 30 167 .. 0.83
Alignments for each domain:
== domain 1 score: 13.2 bits; conditional E-value: 9.7e-06
DREV 84 iekespasdqedkklldlGaGdGeitkrvaptfeev 119
+ ++a q+ +++ldlG G+G+ t +a+++ +v
tr|A9V2V4|A9V2V4_MONBE 42 RNALQWAELQRGNRVLDLGCGNGHATLGLASFVGRV 77
46789************************9999874 PP
>> tr|A9V663|A9V663_MONBE rRNA adenine N(6)-methyltransferase OS=Monosiga brevicollis OX=81824 GN=27741 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.3 0.0 7.5e-05 0.14 87 135 .. 56 104 .. 33 110 .. 0.85
Alignments for each domain:
== domain 1 score: 10.3 bits; conditional E-value: 7.5e-05
DREV 87 espasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkk 135
+ a+ + + ++l++G G G++t ++ + ++v a e+ ++ l+k+
tr|A9V663|A9V663_MONBE 56 IDKAAIKSTDTVLEIGPGTGNLTVKLLEKGKKVVACEVDPRLAAELQKR 104
3455667799********************************9999986 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (265 nodes)
Target sequences: 9188 (5511963 residues searched)
Passed MSV filter: 154 (0.016761); expected 183.8 (0.02)
Passed bias filter: 140 (0.0152373); expected 183.8 (0.02)
Passed Vit filter: 21 (0.00228559); expected 9.2 (0.001)
Passed Fwd filter: 5 (0.000544188); expected 0.1 (1e-05)
Initial search space (Z): 9188 [actual number of targets]
Domain search space (domZ): 5 [number of targets reported over threshold]
# CPU time: 0.11u 0.01s 00:00:00.12 Elapsed: 00:00:00.06
# Mc/sec: 24344.50
//
[ok]