# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/DREV.hmm.txt
# target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: DREV [M=265]
Accession: PF05219.11
Description: DREV methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-94 316.8 0.0 1.6e-94 316.5 0.0 1.0 1 tr|W4ZHV4|W4ZHV4_STRPU Uncharacterized protein OS=Strongyloc
0.00084 19.2 0.0 0.0013 18.6 0.0 1.3 1 tr|W4XYP7|W4XYP7_STRPU Uncharacterized protein OS=Strongyloc
0.0023 17.7 0.0 1.9 8.2 0.0 2.2 2 tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongyloc
0.0039 17.0 0.0 0.0088 15.8 0.0 1.5 1 tr|W4ZJS9|W4ZJS9_STRPU Uncharacterized protein OS=Strongyloc
------ inclusion threshold ------
0.011 15.5 0.0 0.017 14.9 0.0 1.2 1 tr|W4XJA0|W4XJA0_STRPU Uncharacterized protein OS=Strongyloc
0.015 15.0 0.0 0.024 14.4 0.0 1.3 1 tr|W4YG90|W4YG90_STRPU rRNA adenine N(6)-methyltransferase O
0.024 14.4 0.0 0.036 13.8 0.0 1.2 1 tr|W4Z0W7|W4Z0W7_STRPU Uncharacterized protein OS=Strongyloc
0.033 13.9 0.0 0.087 12.6 0.0 1.6 1 tr|W4ZBP9|W4ZBP9_STRPU Uncharacterized protein OS=Strongyloc
0.069 12.9 0.0 0.12 12.2 0.0 1.3 1 tr|W4YGN5|W4YGN5_STRPU Uncharacterized protein OS=Strongyloc
0.25 11.1 0.0 0.37 10.5 0.0 1.2 1 tr|W4XXT3|W4XXT3_STRPU Uncharacterized protein OS=Strongyloc
Domain annotation for each sequence (and alignments):
>> tr|W4ZHV4|W4ZHV4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 316.5 0.0 5.7e-98 1.6e-94 1 265 [] 37 299 .. 37 299 .. 0.97
Alignments for each domain:
== domain 1 score: 316.5 bits; conditional E-value: 5.7e-98
DREV 1 Wyvlnre.lseslqalfvaslpdaetqsflenskklsanlfiqlyhalassilslfmsktdinGllgrGsmfvlseeqfrkllaiek 86
Wy ++ l+e l ++fv+s d t fl+ ++s++l +q++h+la++ l +fms t++nG+l+rGsmfv+s +q ++ll +
tr|W4ZHV4|W4ZHV4_STRPU 37 WYRCDVTkLPEWLSSKFVQSSIDRRTELFLDGCYEKSGWLMTQMWHSLAKAALAFFMSTTSVNGFLKRGSMFVFSRDQIQRLLGVT- 122
***99766****************************************************************************99. PP
DREV 87 espasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkynvlsalelq..etdvkldlilclnlldrcfdplkll 171
+d++ ++++dlGaGdGe+tk v +f+evy+te+s+tm++rl++++y++l + + +t+ +d++ clnlldrc++pl ll
tr|W4ZHV4|W4ZHV4_STRPU 123 ----ADWKAERVIDLGAGDGEVTKEVDFMFQEVYTTEASWTMQWRLSQRGYKILPIDGWSqeKTGHAYDMVCCLNLLDRCDQPLVLL 205
....89*************************************************9998522699********************** PP
DREV 172 edirsalepngrvivalvlPvshyvetntgksekpsellevkGrsyeeevarli.evlkkagfeveaftrlPylceGdlnnsfyyld 257
+dir+ l p g v++a+vlP++++ve +g +++pse++ev+G+++ee+v++l+ v+++agf+v +f r+PylceGd + fy+ld
tr|W4ZHV4|W4ZHV4_STRPU 206 RDIRESLSPSGVVVMAVVLPFKQFVEYGSG-QNRPSEVIEVQGETWEEQVHHLVqGVFQPAGFQVRSFSRVPYLCEGDATQPFYHLD 291
***************************996.5799*******************89******************************* PP
DREV 258 daifvlkk 265
da+fvl+k
tr|W4ZHV4|W4ZHV4_STRPU 292 DALFVLEK 299
*****975 PP
>> tr|W4XYP7|W4XYP7_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.6 0.0 4.5e-07 0.0013 97 188 .. 32 129 .. 20 156 .. 0.79
Alignments for each domain:
== domain 1 score: 18.6 bits; conditional E-value: 4.5e-07
DREV 97 klldlGaGdGeitkrvaptfeevyatelsetmrdrl......kkkkynvlsalelqetdvkldlilclnlldrcfdplklledirsa 177
ld+G G G++t+ +ap+f+ev ++s+ +d k + + v a +l d dli++ +fd ++ +++ +
tr|W4XYP7|W4XYP7_STRPU 32 MALDIGCGPGQLTRSLAPYFDEVLGVDVSSAQIDVAktaqnpKNLSFSVGIAEDLPTPDSSVDLITSAT-ASHYFDWTEFRKEVNRV 117
469************************9998776441111115567888778889999*******9865.56789999999999999 PP
DREV 178 lepng.rvival 188
l+png +++++
tr|W4XYP7|W4XYP7_STRPU 118 LKPNGcLAVLSF 129
999751566665 PP
>> tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 7.1 0.0 0.0014 4.1 96 183 .. 109 208 .. 98 229 .. 0.77
2 ! 8.2 0.0 0.00067 1.9 96 183 .. 273 372 .. 261 393 .. 0.82
Alignments for each domain:
== domain 1 score: 7.1 bits; conditional E-value: 0.0014
DREV 96 kklldlGaGdGeitkrvaptfee...........vyatelsetmrdrlkkkk.ynvlsalelqetdvkldlilclnlldrcfdplkl 170
++ld+G G G t+++a+ f e + +e r lk ++v + + + +d +n+l p l
tr|W4Y7A2|W4Y7A2_STRPU 109 IRMLDVGCGAGLATQILAKKFPEshfvgvdiaqsMVDEANAEATRLGLKNVSyFRVDGSVMPSDWASTFDHAFFFNMLHDTSRPDLL 195
589******************988877777665422222233444455554425787776555555889999*************** PP
DREV 171 ledirsalepngr 183
++d++ +++ +g
tr|W4Y7A2|W4Y7A2_STRPU 196 IDDVKRVMKKDGT 208
*****99988765 PP
== domain 2 score: 8.2 bits; conditional E-value: 0.00067
DREV 96 kklldlGaGdGeitkrvaptfee...........vyatelsetmrdrlkkkk.ynvlsalelqetdvkldlilclnlldrcfdplkl 170
++ld+G G G t+++a+ f e + +e r lk ++v + + + +d +n+l p l
tr|W4Y7A2|W4Y7A2_STRPU 273 IRVLDVGCGAGLATQILAKKFPEshfvgvdiaqsIVDEANAEATRLGLKNVSyFRVDGSVMPSDWASTFDHAFFFNMLHDTSRPDLL 359
69*******************999999999888755555566667777776525787776555555889****************** PP
DREV 171 ledirsalepngr 183
++d++ +++ +g
tr|W4Y7A2|W4Y7A2_STRPU 360 IDDVKRVMKKDGT 372
*****99988765 PP
>> tr|W4ZJS9|W4ZJS9_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.8 0.0 3.1e-06 0.0088 88 184 .. 106 212 .. 96 231 .. 0.78
Alignments for each domain:
== domain 1 score: 15.8 bits; conditional E-value: 3.1e-06
DREV 88 spasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkk..ynvlsale.lqet........dvkldlilclnlldr 163
s+ +d +l++G G G + k+++p ++ v ++s +++ k+ + nv e q t k+d il++ +l
tr|W4ZJS9|W4ZJS9_STRPU 106 SWIELEKDDVVLEVGCGSGRLCKILSPRVNSVTGLDISVGLIELAKRENpaSNVQFFEEdAQ-TfgphlhdwREKFDKILSFTVLQW 191
5666678999****************************999987776653245544333133.222222211469************ PP
DREV 164 cfdplklledirsalepngrv 184
c d +l++++ l+p g
tr|W4ZJS9|W4ZJS9_STRPU 192 CSDKESILKNVYRCLKPGGIF 212
**************9998765 PP
>> tr|W4XJA0|W4XJA0_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.9 0.0 6e-06 0.017 96 187 .. 236 339 .. 224 356 .. 0.85
Alignments for each domain:
== domain 1 score: 14.9 bits; conditional E-value: 6e-06
DREV 96 kklldlGaGdGeitkrvaptfee.........vyatelse..tmrdrlkkkkynvlsale.lqetdvkldlilclnlldrcfdplkl 170
++ld+G G+G + +a+++ + ya + ++ + ++ +++++ a +e ++k+d +l+ + l + + + +
tr|W4XJA0|W4XJA0_STRPU 236 ITVLDVGCGEGGASILMAKQYPNsrfigidicSYAIQQAKgyAIDAEVENVDFQIMDAHLmPDEWEFKFDYVLASDSLHDMAHVGVV 322
589*****************99999***99887998876522567889999****98876357789********************* PP
DREV 171 ledirsalepngrviva 187
l++i+++l+pn+++ v
tr|W4XJA0|W4XJA0_STRPU 323 LREIQKVLKPNCHMSVL 339
************98765 PP
>> tr|W4YG90|W4YG90_STRPU rRNA adenine N(6)-methyltransferase OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.4 0.0 8.5e-06 0.024 82 135 .. 30 84 .. 10 98 .. 0.87
Alignments for each domain:
== domain 1 score: 14.4 bits; conditional E-value: 8.5e-06
DREV 82 laieke.spasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkk 135
l+ie s a+ + + ++l++G G G++t ++ + ++v a el ++ l+k+
tr|W4YG90|W4YG90_STRPU 30 LVIESIiSKAALRSTDTVLEVGPGTGNMTVKMLDKAKKVVACELDPRLVAELQKR 84
5555431556667899*********************************999986 PP
>> tr|W4Z0W7|W4Z0W7_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.8 0.0 1.3e-05 0.036 94 179 .. 126 223 .. 119 252 .. 0.78
Alignments for each domain:
== domain 1 score: 13.8 bits; conditional E-value: 1.3e-05
DREV 94 edkklldlGaGdGeitkrvaptfee...........vyatelsetmrdrlkkkkynvlsalelqetdv.kldlilclnlldrcfdpl 168
+++ +ldlG G+G+ t +a+ f a +e r l k+ v + l +t ++l++c++ + + dp
tr|W4Z0W7|W4Z0W7_STRPU 126 TNVSVLDLGCGQGHATMLMAQRFPGctfygldisqkAIAEARAEAARLSLTNCKFMVQDVATLPHTWTnTFQLVTCFDAFHDMADPE 212
6789*******************988866666666555555566667778888999988888777754169*******999999999 PP
DREV 169 klledirsale 179
+l++ r ++
tr|W4Z0W7|W4Z0W7_STRPU 213 GVLRETRRVMI 223
99998887765 PP
>> tr|W4ZBP9|W4ZBP9_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.6 0.0 3.1e-05 0.087 90 131 .. 83 125 .. 64 142 .. 0.78
Alignments for each domain:
== domain 1 score: 12.6 bits; conditional E-value: 3.1e-05
DREV 90 asdqedkklldlGaGdGeitk.rvaptfeevyatelsetmrdr 131
d++dk +ld+GaG G ++ v+ +vya e+s+ +
tr|W4ZBP9|W4ZBP9_STRPU 83 HEDFKDKVVLDVGAGSGILSFfAVQAGARKVYAIEASSIAEQA 125
56899*************996257888999*******876544 PP
>> tr|W4YGN5|W4YGN5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.2 0.0 4e-05 0.12 84 136 .. 31 83 .. 27 100 .. 0.85
Alignments for each domain:
== domain 1 score: 12.2 bits; conditional E-value: 4e-05
DREV 84 iekespasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkk 136
i++ + ++d ++ ++d+G G G+ t+ +a +f++ ++se ++ kk++
tr|W4YGN5|W4YGN5_STRPU 31 IKHTKNSTDLKPGLVVDVGCGSGQFTQSLARHFDRALGFDISEAQIEEAKKHN 83
5666777899999*************************9**999998776654 PP
>> tr|W4XXT3|W4XXT3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.5 0.0 0.00013 0.37 92 127 .. 60 96 .. 48 120 .. 0.83
Alignments for each domain:
== domain 1 score: 10.5 bits; conditional E-value: 0.00013
DREV 92 dqedkklldlGaGdGeitkrvapt.feevyatelset 127
+ +d ++ld+G+G G++ + +a++ f +++ + se+
tr|W4XXT3|W4XXT3_STRPU 60 QDKDCQILDVGSGTGQVGELMAQHgFTNIHGVDFSEK 96
457899***************9876899999888887 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (265 nodes)
Target sequences: 28594 (14266044 residues searched)
Passed MSV filter: 595 (0.0208086); expected 571.9 (0.02)
Passed bias filter: 468 (0.0163671); expected 571.9 (0.02)
Passed Vit filter: 48 (0.00167867); expected 28.6 (0.001)
Passed Fwd filter: 10 (0.000349724); expected 0.3 (1e-05)
Initial search space (Z): 28594 [actual number of targets]
Domain search space (domZ): 10 [number of targets reported over threshold]
# CPU time: 0.28u 0.01s 00:00:00.29 Elapsed: 00:00:00.11
# Mc/sec: 34368.20
//
[ok]