# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/DREV.hmm.txt
# target sequence database: proteomes/Xenopus_tropicalis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: DREV [M=265]
Accession: PF05219.11
Description: DREV methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.5e-120 401.7 0.0 1.7e-120 401.5 0.0 1.0 1 tr|F7CVL8|F7CVL8_XENTR Methyltransferase-like 9 OS=Xenopus t
0.00057 19.5 0.0 0.0007 19.2 0.0 1.3 1 tr|A9JTN6|A9JTN6_XENTR LOC100127805 protein (Fragment) OS=Xe
0.0088 15.6 0.0 0.013 15.0 0.0 1.2 1 tr|F6ZHI8|F6ZHI8_XENTR Uncharacterized protein OS=Xenopus tr
------ inclusion threshold ------
0.055 13.0 0.1 0.45 10.0 0.0 2.3 2 tr|F7EG74|F7EG74_XENTR Coactivator-associated arginine methy
0.059 12.9 0.0 0.09 12.3 0.0 1.3 1 sp|B0JYW5|ANM6_XENTR Protein arginine N-methyltransferase
0.096 12.2 0.0 0.11 11.9 0.0 1.2 1 tr|F6TRH8|F6TRH8_XENTR Uncharacterized protein OS=Xenopus tr
0.15 11.5 0.0 0.24 10.9 0.0 1.2 1 tr|K9J875|K9J875_XENTR rRNA adenine N(6)-methyltransferase O
0.22 11.0 0.0 0.38 10.2 0.0 1.3 1 tr|F7A0S9|F7A0S9_XENTR NADH:ubiquinone oxidoreductase comple
Domain annotation for each sequence (and alignments):
>> tr|F7CVL8|F7CVL8_XENTR Methyltransferase-like 9 OS=Xenopus tropicalis OX=8364 GN=mettl9 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 401.5 0.0 5.7e-124 1.7e-120 1 265 [] 54 317 .. 54 317 .. 0.99
Alignments for each domain:
== domain 1 score: 401.5 bits; conditional E-value: 5.7e-124
DREV 1 Wyvlnre.lseslqalfvaslpdaetqsflenskklsanlfiqlyhalassilslfmsktdinGllgrGsmfvlseeqfrkllaiek 86
Wy +++e ls+ l+ +f++s++d +tq+fl++s+++s++l iqlyh++ ss++s+fms+t+inGllgrGsmfv+s+eqf++ll+i+
tr|F7CVL8|F7CVL8_XENTR 54 WYFCDTEkLSDCLRPVFIQSYLDHGTQTFLNRSIEKSGWLSIQLYHSFMSSVFSMFMSRTSINGLLGRGSMFVFSPEQFQRLLKID- 139
******99******************************************************************************. PP
DREV 87 espasdqedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkkyn..vlsalelqetdvkldlilclnlldrcfdplkll 171
+++++++lldlGaGdGe+tk ++p+fee+y te+s+tm+++l+kkky+ vl + e+q t++++d+i+clnlldrc++p++ll
tr|F7CVL8|F7CVL8_XENTR 140 ----PEWKSHRLLDLGAGDGEVTKVMSPHFEEIYVTEMSQTMIWQLQKKKYRsrVLNIDEWQSTGFQYDVISCLNLLDRCHQPVTLL 222
....999********************************************5559******************************** PP
DREV 172 edirsalep.ngrvivalvlPvshyvetntgksekpsellevkGrsyeeevarlievlkkagfeveaftrlPylceGdlnnsfyyld 257
+++rs+lep +grvi+alvlP+++yve+ +gk+ekpse++ev G +ee+v++l +v++ agf vea trlPylceGd++n++y+ld
tr|F7CVL8|F7CVL8_XENTR 223 KEMRSVLEPtRGRVILALVLPFHPYVENGSGKWEKPSEVMEVTGTVWEEQVNSLADVFHVAGFAVEAVTRLPYLCEGDMYNDYYVLD 309
*********9***************************************************************************** PP
DREV 258 daifvlkk 265
da+fvl++
tr|F7CVL8|F7CVL8_XENTR 310 DAVFVLRP 317
*****986 PP
>> tr|A9JTN6|A9JTN6_XENTR LOC100127805 protein (Fragment) OS=Xenopus tropicalis OX=8364 GN=LOC100127805 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.2 0.0 2.3e-07 0.0007 99 183 .. 53 142 .. 27 196 .. 0.84
Alignments for each domain:
== domain 1 score: 19.2 bits; conditional E-value: 2.3e-07
DREV 99 ldlGaGdGeitkrvaptfeevyatelsetmrdrlkk......kkynvlsalelqetdvkldlilclnlldrcfdplklledirsale 179
+d+G G G+ ++ + p+f++v t++se +++ ++ + y+v +a e+ + dli++ + fd k+l++++ +l
tr|A9JTN6|A9JTN6_XENTR 53 VDVGCGTGQTSRSLVPYFQKVLGTDISEAQIEQANHadgfpnLVYRVSAAEEIPAENASVDLITACAAV-HWFDIEKFLKELQDVLS 138
7****************************9999775222222679*******9999********99887.57899999999999999 PP
DREV 180 pngr 183
p +
tr|A9JTN6|A9JTN6_XENTR 139 PYVH 142
8554 PP
>> tr|F6ZHI8|F6ZHI8_XENTR Uncharacterized protein OS=Xenopus tropicalis OX=8364 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.0 0.0 4.3e-06 0.013 96 233 .. 43 191 .. 23 205 .. 0.75
Alignments for each domain:
== domain 1 score: 15.0 bits; conditional E-value: 4.3e-06
DREV 96 kklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkkk......ynvlsalelqetdvkldlilclnlldrcfdplklledirs 176
+ +d+G G G t+ +ap+f++v ++se + +k y++ a el d dli + l f+p k++++
tr|F6ZHI8|F6ZHI8_XENTR 43 QLAVDVGCGTGRSTQALAPYFQKVIGIDVSESQLNVARKCTshnniyYQIAQAEELPLEDASVDLINA-GLAAHWFNPEKFVQEAAR 128
3458**********************99999876654442111124367777777999999*****98.788999**********99 PP
DREV 177 alep.ngrvivalvlPvs.hyvetnt...gksekpsellevkG.rsyeeevarlievlkkagf 233
+l+ + ++ ++ l ++ +y e+ +++ +++l ++ ++ e +++e+++ f
tr|F6ZHI8|F6ZHI8_XENTR 129 VLKHgGCLALHSFSLEYEiQYKEKSEeltAVFNEVRKILMIQAsETIYEFNRKVVELFRAIPF 191
998868899999999885357665432227788999999998856677777788899998777 PP
>> tr|F7EG74|F7EG74_XENTR Coactivator-associated arginine methyltransferase 1 OS=Xenopus tropicalis OX=8364 GN=carm1 PE
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -0.7 0.0 0.26 8e+02 96 113 .. 10 27 .. 4 103 .. 0.78
2 ? 10.0 0.0 0.00015 0.45 88 128 .. 149 190 .. 141 204 .. 0.82
Alignments for each domain:
== domain 1 score: -0.7 bits; conditional E-value: 0.26
DREV 96 kklldlGaGdGeitkrva 113
++ll +G +Gei ++ +
tr|F7EG74|F7EG74_XENTR 10 VRLLSIGDANGEIQRHAE 27
688899999999887754 PP
== domain 2 score: 10.0 bits; conditional E-value: 0.00015
DREV 88 spasdqedkklldlGaGdGeitk.rvaptfeevyatelsetm 128
+ +d++dk +ld+G G G ++ v+ +vya e+s+
tr|F7EG74|F7EG74_XENTR 149 QNHTDFKDKVVLDVGCGSGILSFfAVQAGARKVYAVEASTMA 190
567899**************996257888999*****99643 PP
>> sp|B0JYW5|ANM6_XENTR Protein arginine N-methyltransferase 6 OS=Xenopus tropicalis OX=8364 GN=prmt6 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.3 0.0 3e-05 0.09 90 128 .. 49 88 .. 39 125 .. 0.80
Alignments for each domain:
== domain 1 score: 12.3 bits; conditional E-value: 3e-05
DREV 90 asdqedkklldlGaGdGeitk.rvaptfeevyatelsetm 128
s + k++ld+GaG G ++ v+ + vya e+s+
sp|B0JYW5|ANM6_XENTR 49 HSSLQGKTVLDVGAGTGILSVfSVQAGAQAVYAVEASSMS 88
5668899**********9997357888999******9854 PP
>> tr|F6TRH8|F6TRH8_XENTR Uncharacterized protein OS=Xenopus tropicalis OX=8364 GN=LOC100485096 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.9 0.0 3.8e-05 0.11 98 186 .. 45 139 .. 20 162 .. 0.74
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 3.8e-05
DREV 98 lldlGaGdGeitkrvaptfeevyatelset...mrdrl...kkkkynvlsalelqetdvkldlilclnlldrcfdplklledirsal 178
+d+G G G t+ +ap+f++v ++s + r+ + y++ a el d dli + l f+p k++++ +l
tr|F6TRH8|F6TRH8_XENTR 45 AVDVGCGTGRSTQALAPHFQKVIGIDISDSqlcVARRFnshENISYQIAQAEELPLEDASVDLINA-GLAAHWFNPEKFVQEAARVL 130
58*******************999999875222233331115567999999998888999999987.67778888888888888877 PP
DREV 179 ep.ngrviv 186
+ + ++
tr|F6TRH8|F6TRH8_XENTR 131 KNgGCLALN 139
764555554 PP
>> tr|K9J875|K9J875_XENTR rRNA adenine N(6)-methyltransferase OS=Xenopus tropicalis OX=8364 GN=dimt1 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.9 0.0 7.8e-05 0.24 93 135 .. 55 97 .. 38 127 .. 0.83
Alignments for each domain:
== domain 1 score: 10.9 bits; conditional E-value: 7.8e-05
DREV 93 qedkklldlGaGdGeitkrvaptfeevyatelsetmrdrlkkk 135
+ + +l++G G G++t ++ + ++v a el +++ l+k+
tr|K9J875|K9J875_XENTR 55 RPTDVVLEVGPGTGNMTMKLLEKAKRVVACELDTRLVAELQKR 97
446779**********************************997 PP
>> tr|F7A0S9|F7A0S9_XENTR NADH:ubiquinone oxidoreductase complex assembly factor 5 OS=Xenopus tropicalis OX=8364 GN=ndu
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.2 0.0 0.00013 0.38 99 185 .. 138 229 .. 129 233 .. 0.76
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 0.00013
DREV 99 ldlGaGdGeitkrvapt.feevyatelsetmrdrlkkkk...ynvlsale.lqetdvkldlilclnlldrcfdplklledirsalep 180
ldlG+G G i++++++ +e+ ++lse+ +l + +v+ e + + +dl+++ l d + +++i+ +l+p
tr|F7A0S9|F7A0S9_XENTR 138 LDLGSGRGYISQHLTKDiVERFVHADLSEKALRNLAASEipsVRVIVDEEfVPFKENTFDLVVSSLSLHWVNDLPRAFQEIHRILKP 224
9************9876156666789***9999998765222688988884344567799988777778888888888899999988 PP
DREV 181 ngrvi 185
+g i
tr|F7A0S9|F7A0S9_XENTR 225 DGVFI 229
88665 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (265 nodes)
Target sequences: 24182 (11782085 residues searched)
Passed MSV filter: 436 (0.0180299); expected 483.6 (0.02)
Passed bias filter: 322 (0.0133157); expected 483.6 (0.02)
Passed Vit filter: 41 (0.00169548); expected 24.2 (0.001)
Passed Fwd filter: 8 (0.000330825); expected 0.2 (1e-05)
Initial search space (Z): 24182 [actual number of targets]
Domain search space (domZ): 8 [number of targets reported over threshold]
# CPU time: 0.21u 0.01s 00:00:00.22 Elapsed: 00:00:00.08
# Mc/sec: 39028.16
//
[ok]