# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/EMG1.hmm.txt
# target sequence database:        proteomes/Amphimedon_queenslandica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       EMG1  [M=194]
Accession:   PF03587.13
Description: EMG1/NEP1 methyltransferase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence                       Description
    ------- ------ -----    ------- ------ -----   ---- --  --------                       -----------
    6.2e-42  144.7   0.1    9.2e-42  144.1   0.1    1.2  1  tr|A0A1X7VND0|A0A1X7VND0_AMPQE  Uncharacterized protein OS=Amphi


Domain annotation for each sequence (and alignments):
>> tr|A0A1X7VND0|A0A1X7VND0_AMPQE  Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  144.1   0.1   2.1e-46   9.2e-42       1      94 [.      37     127 ..      37     129 .. 0.97

  Alignments for each domain:
  == domain 1  score: 144.1 bits;  conditional E-value: 2.1e-46
                                     EEEEEES--B--GGSCGGSB--HHHHCGG.TTSTTGGGSS-CHHHHHHHHHHHCSCHHCTT-EEEEEEETTSEEEEE-T CS
                            EMG1   1 ivLeeasLelvkvkkkseqLLnsddhkkilkklkreakeaRpDIvHqcLlalldspLnkagllqvyihttknvlIevnp 79 
                                     +vLe+a+Le++k + k+++LLnsd+hk+ ++k++rea  aRpDI+HqcL++lldspLn+ag+lq+yiht++nvlIev+p
  tr|A0A1X7VND0|A0A1X7VND0_AMPQE  37 LVLERANLETIKIG-KNFELLNSDKHKSQIAKYGREA--ARPDITHQCLMMLLDSPLNRAGMLQIYIHTERNVLIEVHP 112
                                     59***********9.******************9986..7*************************************** PP

                                     T----SSHHHHHHHH CS
                            EMG1  80 qtRiPrtfkrFagLm 94 
                                     qtR+Prtf+rF+gLm
  tr|A0A1X7VND0|A0A1X7VND0_AMPQE 113 QTRVPRTFDRFCGLM 127
                                     *************** PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (194 nodes)
Target sequences:                        43435  (14716620 residues searched)
Passed MSV filter:                      1567  (0.0360769); expected 868.7 (0.02)
Passed bias filter:                      957  (0.0220329); expected 868.7 (0.02)
Passed Vit filter:                        75  (0.00172672); expected 43.4 (0.001)
Passed Fwd filter:                         1  (2.30229e-05); expected 0.4 (1e-05)
Initial search space (Z):              43435  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.24u 0.01s 00:00:00.25 Elapsed: 00:00:00.11
# Mc/sec: 25954.77
//
[ok]