# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/EMG1.hmm.txt
# target sequence database:        proteomes/Dictyostelium_discoideum.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       EMG1  [M=194]
Accession:   PF03587.13
Description: EMG1/NEP1 methyltransferase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
      1e-92  308.6   0.7    7.1e-92  305.9   0.7    1.9  1  tr|Q7KWM6|Q7KWM6_DICDI  Uncharacterized protein OS=Dictyostel


Domain annotation for each sequence (and alignments):
>> tr|Q7KWM6|Q7KWM6_DICDI  Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0168247 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  305.9   0.7   5.6e-96   7.1e-92       1     194 []      18     332 ..      18     332 .. 0.98

  Alignments for each domain:
  == domain 1  score: 305.9 bits;  conditional E-value: 5.6e-96
                             EEEEEES--B--GGSCGGSB--HHHHCGG.TTSTTGGGSS-CHHHHHHHHHHHCSCHHCTT-EEEEEEETTSEEEEE-TT----SSH CS
                    EMG1   1 ivLeeasLelvkvkkkseqLLnsddhkkilkklkreakeaRpDIvHqcLlalldspLnkagllqvyihttknvlIevnpqtRiPrtf 87 
                             ivLe+a+L++vkvk +s+qLLn+ddh++ilkk+++ea+eaRpDI+HqcLlal+dspLnkagllqv+i+ttknvlIev+pqtRiPrtf
  tr|Q7KWM6|Q7KWM6_DICDI  18 IVLEHATLDTVKVK-ESFQLLNCDDHADILKKHGKEASEARPDILHQCLLALFDSPLNKAGLLQVFIKTTKNVLIEVHPQTRIPRTF 103
                             8************7.************************************************************************ PP

                             HHHHHHHHHHHCCSEEEETTEE.SCEEEECS-HHHHCCC-SEEEEE-TTSEE-.................................. CS
                    EMG1  88 krFagLmvqLLkklsirategeekLlkviknpitdhlppgskiillsesaekklvdleefv..........vkpvv........... 153
                             +rFagLmvqLLkklsirat+g++kL+kviknpitdhl+pg+ki+++s+sa+ k+vdl+efv          v+pv+           
  tr|Q7KWM6|Q7KWM6_DICDI 104 NRFAGLMVQLLKKLSIRATNGPDKLFKVIKNPITDHLAPGTKIYATSFSAP-KCVDLFEFVpeifgydplpVIPVSttptgvalgss 189
                             ***************************************************.*********999998877777777999******** PP

                             ....................................................................................... CS
                    EMG1 154 ....................................................................................... 153
                                                                                                                    
  tr|Q7KWM6|Q7KWM6_DICDI 190 tnnnnnvnsiqslnslggaqvrsagesyyegmedeeaaeeeekatetnnknknkrkqdeksdndkkkqktsnttttttstattvqkk 276
                             *************************************************************************************** PP

                             ...............EEEE-SSSS....---HHEEESSSS---HHHHHHHHHHHCH CS
                    EMG1 154 ...............fvigamskgsvkidykeeeisisnypLsaavvcskiltafE 194
                                            +vigams+g++ki+yk+eei++snypLsaa++c+ki+t+fE
  tr|Q7KWM6|Q7KWM6_DICDI 277 pekksdqlnglqqvcIVIGAMSTGAMKIEYKHEEIAFSNYPLSAAGACFKITTVFE 332
                             ******************************************************98 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (194 nodes)
Target sequences:                        12739  (6856946 residues searched)
Passed MSV filter:                       827  (0.0649188); expected 254.8 (0.02)
Passed bias filter:                      226  (0.0177408); expected 254.8 (0.02)
Passed Vit filter:                        17  (0.00133448); expected 12.7 (0.001)
Passed Fwd filter:                         1  (7.84991e-05); expected 0.1 (1e-05)
Initial search space (Z):              12739  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.10u 0.00s 00:00:00.10 Elapsed: 00:00:00.05
# Mc/sec: 26604.95
//
[ok]