# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/EMG1.hmm.txt
# target sequence database:        proteomes/Monosiga_brevicollis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       EMG1  [M=194]
Accession:   PF03587.13
Description: EMG1/NEP1 methyltransferase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    3.8e-74  247.6   0.0    4.5e-74  247.4   0.0    1.0  1  tr|A9UTL3|A9UTL3_MONBE  Predicted protein OS=Monosiga brevico


Domain annotation for each sequence (and alignments):
>> tr|A9UTL3|A9UTL3_MONBE  Predicted protein OS=Monosiga brevicollis OX=81824 GN=15167 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  247.4   0.0   4.9e-78   4.5e-74      16     194 .]       7     189 ..       2     189 .. 0.97

  Alignments for each domain:
  == domain 1  score: 247.4 bits;  conditional E-value: 4.9e-78
                             CGGSB--HHHHCGG.TTSTTGGGSS-CHHHHHHHHHHHCSCHHCTT-EEEEEEETTSEEEEE-TT----SSHHHHHHHHHHHHCCSE CS
                    EMG1  16 kseqLLnsddhkkilkklkreakeaRpDIvHqcLlalldspLnkagllqvyihttknvlIevnpqtRiPrtfkrFagLmvqLLkkls 102
                             + +qLLns+dh++ilkk++r+  ++RpDI+HqcLl+lldspLnkagllqvyiht+knvlIev+pq+R+Pr ++rF+gLmvqLL++ls
  tr|A9UTL3|A9UTL3_MONBE   7 NGFQLLNSTDHAHILKKHGRDSLNIRPDITHQCLLMLLDSPLNKAGLLQVYIHTAKNVLIEVHPQCRVPRIYSRFSGLMVQLLHDLS 93 
                             789************************************************************************************ PP

                             EEETTEE.SCEEEECS-HHHHCCC-SEEEEE-TTSEE-..................EEEE-SSSS....---HHEEESSSS---HHH CS
                    EMG1 103 irategeekLlkviknpitdhlppgskiillsesaekklvdleefv.....vkpvvfvigamskgsvkidykeeeisisnypLsaav 184
                             i a+++++kLlkviknpitdhlp+g+ +i+++ +a+ klv+ ++f+     +kpv++viga+++g+ ++ + +eei++s y +saa+
  tr|A9UTL3|A9UTL3_MONBE  94 IAAKGSSQKLLKVIKNPITDHLPTGCLKIGTTYQAK-KLVRARDFAtknamDKPVCVVIGAIAHGQLDVPWITEEIAVSGYAMSAAG 179
                             ************************************.9889999999988899********************************** PP

                             HHHHHHHHCH CS
                    EMG1 185 vcskiltafE 194
                             vc k++  fE
  tr|A9UTL3|A9UTL3_MONBE 180 VCGKLTDGFE 189
                             ******9998 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (194 nodes)
Target sequences:                         9188  (5511963 residues searched)
Passed MSV filter:                       221  (0.0240531); expected 183.8 (0.02)
Passed bias filter:                      185  (0.020135); expected 183.8 (0.02)
Passed Vit filter:                        20  (0.00217675); expected 9.2 (0.001)
Passed Fwd filter:                         1  (0.000108838); expected 0.1 (1e-05)
Initial search space (Z):               9188  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.10u 0.01s 00:00:00.11 Elapsed: 00:00:00.05
# Mc/sec: 21386.42
//
[ok]