# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/EMG1.hmm.txt
# target sequence database:        proteomes/Nematostella_vectensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       EMG1  [M=194]
Accession:   PF03587.13
Description: EMG1/NEP1 methyltransferase
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    1.7e-87  292.5   0.3      2e-87  292.3   0.3    1.0  1  tr|A7S524|A7S524_NEMVE  Predicted protein OS=Nematostella vec


Domain annotation for each sequence (and alignments):
>> tr|A7S524|A7S524_NEMVE  Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g166546 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  292.3   0.3   8.3e-92     2e-87       1     194 []      31     224 ..      31     224 .. 0.99

  Alignments for each domain:
  == domain 1  score: 292.3 bits;  conditional E-value: 8.3e-92
                             EEEEEES--B--GGSCGGSB--HHHHCGG.TTSTTGGGSS-CHHHHHHHHHHHCSCHHCTT-EEEEEEETTSEEEEE-TT----SSH CS
                    EMG1   1 ivLeeasLelvkvkkkseqLLnsddhkkilkklkreakeaRpDIvHqcLlalldspLnkagllqvyihttknvlIevnpqtRiPrtf 87 
                             ++Le++sLe vk++ k+++LLn+d+hk+ilkk+kr+ ++aRpDI+HqcLl+lldspLnkagllqvyiht++nvlIe+np+tRiPrtf
  tr|A7S524|A7S524_NEMVE  31 VILEKSSLEAVKNG-KNFELLNCDQHKTILKKNKRDISSARPDITHQCLLMLLDSPLNKAGLLQVYIHTERNVLIEINPHTRIPRTF 116
                             89***********9.************************************************************************ PP

                             HHHHHHHHHHHCCSEEEETTEE.SCEEEECS-HHHHCCC-SEEEEE-TTSEE-...............EEEE-SSSS....---HHE CS
                    EMG1  88 krFagLmvqLLkklsirategeekLlkviknpitdhlppgskiillsesaekklvdleefv..vkpvvfvigamskgsvkidykeee 172
                             +rF+gLmvqLL+klsi+a++g++kLlkviknp+tdhlp+g+k+i++s + e klv+++++v  ++p+vfv+gam++gsv+ +y e++
  tr|A7S524|A7S524_NEMVE 117 DRFCGLMVQLLHKLSIHASDGPQKLLKVIKNPVTDHLPTGCKKIGTSCHVE-KLVNVRDMVpsDEPIVFVVGAMAHGSVSPEYIEDT 202
                             ***************************************************.999*******999********************** PP

                             EESSSS---HHHHHHHHHHHCH CS
                    EMG1 173 isisnypLsaavvcskiltafE 194
                             ++is+ypLsaa+vc+ki+tafE
  tr|A7S524|A7S524_NEMVE 203 VAISQYPLSAALVCAKICTAFE 224
                             *********************8 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (194 nodes)
Target sequences:                        24428  (8257945 residues searched)
Passed MSV filter:                       614  (0.0251351); expected 488.6 (0.02)
Passed bias filter:                      437  (0.0178893); expected 488.6 (0.02)
Passed Vit filter:                        25  (0.00102342); expected 24.4 (0.001)
Passed Fwd filter:                         2  (8.18733e-05); expected 0.2 (1e-05)
Initial search space (Z):              24428  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.13u 0.00s 00:00:00.13 Elapsed: 00:00:00.05
# Mc/sec: 32040.83
//
[ok]