# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/Fibrillarin.hmm.txt
# target sequence database:        proteomes/Ornithorhynchus_anatinus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       Fibrillarin  [M=226]
Accession:   PF01269.17
Description: Fibrillarin
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
   2.3e-107  357.5   0.0   2.6e-107  357.4   0.0    1.0  1  tr|F7DSB1|F7DSB1_ORNAN  Uncharacterized protein OS=Ornithorhy


Domain annotation for each sequence (and alignments):
>> tr|F7DSB1|F7DSB1_ORNAN  Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=3 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  357.4   0.0  1.2e-111  2.6e-107       1     220 [.      34     256 .]      34     256 .] 0.99

  Alignments for each domain:
  == domain 1  score: 357.4 bits;  conditional E-value: 1.2e-111
                             EEEECSSTTEEEEETTSSEEEEEE-SSTT--SSSSEEEEETTE....EEEEE-TTTSHHHHHHHTT-S--S--TTSEEEEESTTTSH CS
             Fibrillarin   1 veeheklegvyivkekgdarlatknlvpgekvYgEklikveee....EyRvWnpfrsKlaaailkglkelpikkgskvLYlGaasGt 83 
                             ve+h++ egv+i+++k+da l+tkn+vpge+vYgEk+i+ve+     EyR WnpfrsKlaaail g+++++ik+g+kvLYlGaasGt
  tr|F7DSB1|F7DSB1_ORNAN  34 VEPHRHEEGVFICRGKEDA-LVTKNMVPGESVYGEKRISVEDGevklEYRAWNPFRSKLAAAILGGIDQIHIKPGAKVLYLGAASGT 119
                             6899999*********999.*********************98899***************************************** PP

                             HHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHTTSTTEEEEES-TTSGGGGTTTS--EEEEEEESSSTTHHHHHHHHHHHHEEEEEE CS
             Fibrillarin  84 tvsHvsDivgeegvvyavefsprvlrelievakkRknivPileDArkPekYralvekvDvifaDvaqpdqarilaknaklflkeggy 170
                             tvsHvsDivg++g+vyavefs+r++r+li+vakkR+n++P++eDAr+P+kYr+l+ +vDvifaDvaqpdq ri+a+na+ fl++gg+
  tr|F7DSB1|F7DSB1_ORNAN 120 TVSHVSDIVGPDGLVYAVEFSHRSGRDLINVAKKRTNVIPVIEDARHPHKYRMLIGMVDVIFADVAQPDQSRIVALNAHNFLRNGGH 206
                             *************************************************************************************** PP

                             EEEEEEHHHHHSSSSHHHHHHHHHHHHHHTTEEEEEEEE-TTTSTTEEEE CS
             Fibrillarin 171 llisikarsidvtkepeevfkeeveklkeeglkvleqvklepyekdhalv 220
                             ++isika++id+t+ pe+vf++e++k+++e++k++eq++lepye+dha+v
  tr|F7DSB1|F7DSB1_ORNAN 207 FVISIKANCIDSTAAPEAVFASEIKKMQQENMKPQEQLTLEPYERDHAVV 256
                             ************************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (226 nodes)
Target sequences:                        21677  (8259262 residues searched)
Passed MSV filter:                       415  (0.0191447); expected 433.5 (0.02)
Passed bias filter:                      335  (0.0154542); expected 433.5 (0.02)
Passed Vit filter:                        24  (0.00110716); expected 21.7 (0.001)
Passed Fwd filter:                         1  (4.61318e-05); expected 0.2 (1e-05)
Initial search space (Z):              21677  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.14u 0.01s 00:00:00.15 Elapsed: 00:00:00.07
# Mc/sec: 26665.62
//
[ok]