# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/FtsJ.hmm.txt
# target sequence database: proteomes/Caenorhabditis_elegans.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: FtsJ [M=177]
Accession: PF01728.18
Description: FtsJ-like methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-67 226.9 0.1 2.6e-67 226.5 0.1 1.2 1 sp|Q22031|TRM7_CAEEL Putative tRNA (cytidine(32)/guanosine
1.2e-57 195.1 0.1 2.2e-57 194.2 0.1 1.5 1 tr|Q9N5N9|Q9N5N9_CAEEL Putative rRNA methyltransferase OS=Ca
2.2e-48 164.8 0.0 2.6e-48 164.6 0.0 1.1 1 sp|O62251|MRM2_CAEEL rRNA methyltransferase 2, mitochondri
1.1e-35 123.5 0.0 2e-35 122.7 0.0 1.5 1 sp|Q9NAA5|MTR1_CAEEL Cap-specific mRNA (nucleoside-2'-O-)-
3.3e-25 89.4 0.0 7.2e-25 88.3 0.0 1.6 1 tr|O76726|O76726_CAEEL Uncharacterized protein OS=Caenorhabd
0.002 18.4 0.0 0.0042 17.4 0.0 1.6 1 tr|Q9BL15|Q9BL15_CAEEL Uncharacterized protein OS=Caenorhabd
0.0023 18.2 0.0 0.02 15.1 0.0 2.0 2 tr|Q9XU55|Q9XU55_CAEEL Uncharacterized protein OS=Caenorhabd
------ inclusion threshold ------
0.014 15.6 0.0 0.022 15.0 0.0 1.4 1 tr|O01594|O01594_CAEEL Uncharacterized protein OS=Caenorhabd
0.017 15.4 0.1 0.079 13.2 0.0 2.1 2 tr|Q9TYV5|Q9TYV5_CAEEL NucleOLar protein OS=Caenorhabditis e
0.025 14.8 0.0 0.04 14.2 0.0 1.4 1 tr|Q9NAA7|Q9NAA7_CAEEL Nop2 (NOP2)/SUN domain family member
0.11 12.8 0.0 1.3 9.3 0.0 2.1 2 tr|H2KZF5|H2KZF5_CAEEL Phosphoethanolamine MethylTransferase
0.23 11.7 0.0 0.32 11.2 0.0 1.3 1 sp|Q22053|FBRL_CAEEL rRNA 2'-O-methyltransferase fibrillar
Domain annotation for each sequence (and alignments):
>> sp|Q22031|TRM7_CAEEL Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Caenorhabditis elegans OX=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 226.5 0.1 1.5e-70 2.6e-67 1 177 [] 21 200 .. 21 200 .. 0.97
Alignments for each domain:
== domain 1 score: 226.5 bits; conditional E-value: 1.5e-70
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT......-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHS CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga...kgkvvavDlqpmaplpgvttiqgditdpetiekikealser 86
+r+Rsa+KL++id++f+++k ++++vDl+aaPG+wsqvl++rl + ++k+va+Dlqpmap+pgv ++qgdit+ +t++++ +++s++
sp|Q22031|TRM7_CAEEL 21 WRARSAFKLMQIDDEFQILKGVRRAVDLCAAPGSWSQVLSKRLYEedqEAKIVAIDLQPMAPIPGVIQLQGDITSVDTANQVIKHFSGE 109
79*****************************************554446**************************************** PP
SEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEEE CS
FtsJ 87 kvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcr 175
k d+v++Dgapdv+g+h+lde++q++L+laa+++++++lk+gg+f++kifr+++++ l++q+kk+F+kv+++kP+ssr++s e+f++c+
sp|Q22031|TRM7_CAEEL 110 KSDIVICDGAPDVTGIHSLDEFMQAELILAAFNITSHVLKEGGNFLAKIFRSRNSSLLYAQMKKYFKKVYLAKPRSSRQSSCEAFVLCL 198
****************************************************************************************9 PP
EE CS
FtsJ 176 gf 177
++
sp|Q22031|TRM7_CAEEL 199 DY 200
85 PP
>> tr|Q9N5N9|Q9N5N9_CAEEL Putative rRNA methyltransferase OS=Caenorhabditis elegans OX=6239 GN=CELE_H06I04.3 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 194.2 0.1 1.3e-60 2.2e-57 1 175 [. 24 198 .. 24 200 .. 0.99
Alignments for each domain:
== domain 1 score: 194.2 bits; conditional E-value: 1.3e-60
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSS CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserk 87
yrsR+a+KL +++++f+++++ ++ vDl+aaPGgw+qv++q + ++ +v+vDl p++p++++ +qgdit+ et+ +ik+ l+
tr|Q9N5N9|Q9N5N9_CAEEL 24 YRSRAAFKLVQLNKRFEFLEKSRATVDLCAAPGGWMQVASQFMPVSSLIVGVDLAPIKPIKNCIALQGDITTNETRAAIKKELKTWS 110
9****************99************************999***************************************** PP
EEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEE CS
FtsJ 88 vdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvc 174
+d+v++Dgap+v ++++ d+++q +L l+al+la+++l++ggtfv+k+fr+ + + l++ ++k+F++v+v+kP++sr es+e+f+vc
tr|Q9N5N9|Q9N5N9_CAEEL 111 ADCVLHDGAPNVGLNWVHDAFQQNCLTLSALKLATQILRKGGTFVTKVFRSNDYSCLIRVFEKLFKRVHVWKPAASRLESAEIFVVC 197
*************************************************************************************** PP
E CS
FtsJ 175 r 175
+
tr|Q9N5N9|Q9N5N9_CAEEL 198 E 198
7 PP
>> sp|O62251|MRM2_CAEEL rRNA methyltransferase 2, mitochondrial OS=Caenorhabditis elegans OX=6239 GN=F45G2.9 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 164.6 0.0 1.6e-51 2.6e-48 1 177 [] 32 212 .. 32 212 .. 0.95
Alignments for each domain:
== domain 1 score: 164.6 bits; conditional E-value: 1.6e-51
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEE.E--TTSSSHHHHHHHHHHHSSE CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvtti.qgditdpetiekikealserkv 88
yr+Rsa+KL+ei+ekfk++kp+ tv+D+g+aPG+w qv++q++ +g +vDlq++ p+ g ++ ditdp+++ ki+e l +r+v
sp|O62251|MRM2_CAEEL 32 YRARSAFKLIEINEKFKFLKPESTVIDIGCAPGSWLQVVVQKCP-NGYASGVDLQNVLPIRGADILsLSDITDPAVKLKIREKLAHRQV 119
9****************99***********************86.59*******************999******************** PP
EEEEE-------S-HHHHHHHHHHHHHHHHHHHHH....HEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEE CS
FtsJ 89 dlvvsDgapdvsgvhdldeylqsqLllaalelalk....llkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflv 173
d+v+sD+ap+ +g +++d+++ ++L+++ ++l + l ++g+ ++ki++g++ ++++++l+ F++v+ vkP ++r +s+e +l
sp|O62251|MRM2_CAEEL 120 DVVLSDMAPNPTGDNATDHLRLIELCRSVFRLFSVeneiELVKNGVYLCKIWDGSARAEFVRELSDRFSTVKTVKPTACRDNSAELYLF 208
*******************************9543233356699********************************************* PP
EEEE CS
FtsJ 174 crgf 177
cr+f
sp|O62251|MRM2_CAEEL 209 CRNF 212
**98 PP
>> sp|Q9NAA5|MTR1_CAEEL Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 OS=Caenorhabditis elegans OX=6239 GN=Y
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 122.7 0.0 1.2e-38 2e-35 1 176 [. 237 463 .. 237 464 .. 0.86
Alignments for each domain:
== domain 1 score: 122.7 bits; conditional E-value: 1.2e-38
TTSHHHHHHHHHHHHH-.-S-TT-E............................EEEES-TT-HHHHHHTTT....-SEEEEEES.S--. CS
FtsJ 1 yrsRsayKLleidekfk.lfkpgkt............................vvDlgaaPGgwsqvllqrlga.kgkvvavDl.qpm. 57
+++R+a+K +++d+ ++ ++++++t + D++a+PGg+s+++l+r g ++k ++++l ++
sp|Q9NAA5|MTR1_CAEEL 237 FQNRAAMKTANMDKIYDwILSRENTendrfllknplqesqtaenvdrsedlfyFADVCAGPGGFSEYMLWRKGFyNAKGFGFTLaGKDd 325
579**************555544334577777777778888888899999999******************866779*******55556 PP
.......---TT-EEE.............E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHH CS
FtsJ 58 .......aplpgvtti.............qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelal 122
a +gd++dp +i+ ++ ++s+ +v+l+++Dg+++v+g+++++e+l+ +L+l++l ++l
sp|Q9NAA5|MTR1_CAEEL 326 fklfkftA-------SsqyffetfygtkdNGDVMDPVNIDSLEAHISRgtsgLGVHLMMADGGFSVEGQENIQEILSKRLYLCQLLVSL 407
64443221.......022234667899*************99988888777788*********************************** PP
HHEEEEEEEEEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEE CS
FtsJ 123 kllkpggtfvlkifr.geete.allkqlkkfFekvsvvkPkssrsesseeflvcrg 176
++++gg+f +k+f+ ++ ++ +l++ ++ ++++vs++kP++sr+++se+++ c+g
sp|Q9NAA5|MTR1_CAEEL 408 CIVREGGNFFCKLFDiFTPFSvGLIYLMRVCYQSVSLHKPHTSRPANSERYITCKG 463
****************999999********************************97 PP
>> tr|O76726|O76726_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_Y40D12A.1 PE=4 SV=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.3 0.0 4.3e-28 7.2e-25 2 177 .] 98 306 .. 97 306 .. 0.83
Alignments for each domain:
== domain 1 score: 88.3 bits; conditional E-value: 4.3e-28
TSHHHHHHHHHHHHH-..-S-.TT-EEEEES-TT-HHHHHHTTT.........-....SEEEEEESS--..............---. CS
FtsJ 2 rsRsayKLleidekfk..lfk.pgktvvDlgaaPGgwsqvllqrl......gak....gkvvavDlqpm..............apl. 60
++++ +KL ei e fk +f+ ++l+ +PG +++ + l + + +k+ a +l+p+ + +
tr|O76726|O76726_CAEEL 98 KNKAFLKLCEIFEVFKfdIFEgSSISSFHLCEGPGYFIEAVHVALmrsrgkN-EemsyWKWGANTLNPYfenrscfdkliddsH-Ir 182
5899*********99944555555569************9955554444331.133459**********999998886665431.23 PP
TT-EEE......E--TTSSSHHHHHHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-..ST CS
FtsJ 61 pgvtti......qgditdpetiekikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr..ge 139
p + + gdi + + + +ik+ l + +dlv++Dg+ +++g++ e + s+L+ a +e+alkll+++g ++lk++r +
tr|O76726|O76726_CAEEL 183 PTMDQWyfgpsdDGDIEKFTEEYLIKQKLAG-TFDLVTADGSTNTQGKEGEIESIVSSLISAEVEVALKLLRRNGRLILKTYRfcAK 268
444444788*****************99977.9**************97666666678***********************997566 PP
THHHHHHHHGGGEEEEEEE----------EEEEEEEEE CS
FtsJ 140 eteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
+t ++++ l F++++ +kP +sr++sse+++vc gf
tr|O76726|O76726_CAEEL 269 STRDVMNLLADNFSSIKAIKPMASRPGSSERYIVCDGF 306
6669*******************************997 PP
>> tr|Q9BL15|Q9BL15_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_Y48G8AL.5 PE=1 SV=4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.4 0.0 2.5e-06 0.0042 22 137 .. 170 311 .. 125 348 .. 0.68
Alignments for each domain:
== domain 1 score: 17.4 bits; conditional E-value: 2.5e-06
T-EEEEES-TT-HHHHHHTTT........-SEEEEEESS--.......---TT-EEEE--TTSSSHHHHHHHHHHH.....SSEEEE CS
FtsJ 22 gktvvDlgaaPGgwsqvllqrlga.....kgkvvavDlqpm.......aplpgvttiqgditdpetiekikealse.....rkvdlv 91
++ v+Dl+aaPG+ + ll+ +++ kg+v+a D+ + l++ +t + +t +++++ +s+ ++d v
tr|Q9BL15|Q9BL15_CAEEL 170 EHFVLDLCAAPGSKTTQLLEMIHEneenpKGMVIANDVDMKrcymlihHTLKRFRTAACAVTCEDAARFPH--ISDsdgglIQFDRV 254
355***************999955445457*****999555457666544477777766665555555222..22222344568888 PP
EE-------S-.HHHHHHHH.......HHHHHHHHHHHH...HHEEEEEEEEEEEE- CS
FtsJ 92 vsDgapdvsgv.hdldeylq.......sqLllaalelal...kllkpggtfvlkifr 137
++D+ + g+ ++ +e+ + + L + ++ +a ++lk gg +v ++
tr|Q9BL15|Q9BL15_CAEEL 255 LADVICSGDGTlRKNPEIWKkwtpqdgLGLHRMQIAIARkgaQQLKVGGRMVYSTCS 311
888885555554555555557777777666666666654222477777777766655 PP
>> tr|Q9XU55|Q9XU55_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_K10H10.6 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.1 0.0 1.2e-05 0.02 46 117 .. 35 114 .. 17 152 .. 0.77
2 ? 1.0 0.0 0.28 4.6e+02 48 99 .. 199 266 .. 174 299 .. 0.72
Alignments for each domain:
== domain 1 score: 15.1 bits; conditional E-value: 1.2e-05
-SEEEEEESS-----..TT-EEEE--TTSSSHHH.HHHHHHHHSSEEEEEE-------S-HHHHHHHH.....HHHHHHH CS
FtsJ 46 kgkvvavDlqpmapl..pgvttiqgditdpetie.kikealserkvdlvvsDgapdvsgvhdldeylq.....sqLllaa 117
++ ++vD+ ++ l +v +i+ + + et++ ki+e ++kvd++ +D++ + +++ +eyl+ L+l+a
tr|Q9XU55|Q9XU55_CAEEL 35 TTSGIGVDTAEVLALagAHVVLINRNLRASETQKrKILEKKPDAKVDIIYCDLSDLKTARKAGEEYLKkkwpiHGLILNA 114
3789*****99955548889999****8777766488888888***********66666788888888666654555555 PP
== domain 2 score: 1.0 bits; conditional E-value: 0.28
EEEEEESS-----TT-EEE........E--TTSSSHHHHHHHHHHH........SSEEEEEE------ CS
FtsJ 48 kvvavDlqpmaplpgvtti........qgditdpetiekikealse........rkvdlvvsDgapdv 99
+++a+ l + + ++t+ ++di++ +t k+++ ls + v + p v
tr|Q9XU55|Q9XU55_CAEEL 199 MLIAFKLHRDEYKNEISTYfvhpgdgvRTDIFRDSTLGKVLTVLSTpcikncsqGAATTVYCATHPEV 266
55566665555555555555566666689999999999999888776666665555566666555544 PP
>> tr|O01594|O01594_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_R08E5.1 PE=4 SV=4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 15.0 0.0 1.3e-05 0.022 20 73 .. 178 243 .. 123 263 .. 0.82
Alignments for each domain:
== domain 1 score: 15.0 bits; conditional E-value: 1.3e-05
-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.............---TT-EEEE--TTSS CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.............aplpgvttiqgditdp 73
+ g++v+D+g++ G+ s l+++ k++ v++ +++ a ++++++iq+d ++
tr|O01594|O01594_CAEEL 178 TGGMRVLDVGCGGGSHSSLLAEQYP-KAHFVGLEIGEDairqakqrktksgAAFNNLEFIQCDAGKM 243
35689******************75.6********99988888777766655668999999998554 PP
>> tr|Q9TYV5|Q9TYV5_CAEEL NucleOLar protein OS=Caenorhabditis elegans OX=6239 GN=nol-2 PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.5 0.0 1.6 2.7e+03 48 78 .. 109 142 .. 101 200 .. 0.64
2 ? 13.2 0.0 4.7e-05 0.079 20 132 .. 304 435 .. 290 459 .. 0.63
Alignments for each domain:
== domain 1 score: -1.5 bits; conditional E-value: 1.6
EEEEEESS-----.TT-EEEE--TTSSSHHH..H CS
FtsJ 48 kvvavDlqpmapl.pgvttiqgditdpetie..k 78
k a+D q+ + + +g + +q +i +++t e +
tr|Q9TYV5|Q9TYV5_CAEEL 109 KSAALDKQKEKIIaEGEEELQLNIANQATFElpT 142
5667788887777788888888888887776332 PP
== domain 2 score: 13.2 bits; conditional E-value: 4.7e-05
-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHH....................S CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse....................r 86
+pg++v+D ++aPGg + ++ ++++g+++a D + +++ i g+ + + +++ l++ +
tr|Q9TYV5|Q9TYV5_CAEEL 304 QPGDRVLDMCSAPGGKTSHIAALMKNSGVLFANDANFT----RCRAIIGNLHRLGVNNTVVCNLGGeefskirpngfdrilldapcS 386
4899*******************998899999997765....555555555555555555433333444447775555555555555 PP
SEEEEEE-------S-...HHHHHHHHHHHHHHHHHHHHHHEEEEEEEE CS
FtsJ 87 kvdlvvsDgapdvsgv...hdldeylqsqLllaalelalkllkpggtfv 132
+ ++ D + ++s + +++q qL+l+al + +gg +v
tr|Q9TYV5|Q9TYV5_CAEEL 387 GTGVIWKDQSVKTSKDsqdVQRRHTMQRQLILSALDSLDANSPNGGYLV 435
5555555555444443200223344446788777776555555555555 PP
>> tr|Q9NAA7|Q9NAA7_CAEEL Nop2 (NOP2)/SUN domain family member OS=Caenorhabditis elegans OX=6239 GN=nsun-5 PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.2 0.0 2.4e-05 0.04 20 79 .. 233 303 .. 213 383 .. 0.77
Alignments for each domain:
== domain 1 score: 14.2 bits; conditional E-value: 2.4e-05
-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--...........---TT-EEEE--TTSSSHHHHH CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm...........aplpgvttiqgditdpetieki 79
+pg +v+D +aaPG + ++ ++++gkv a+D +++ ++++gd+++ ++ +k
tr|Q9NAA7|Q9NAA7_CAEEL 233 RPGSQVFDTCAAPGMKTSHAAAIMENQGKVWAMDRAADrvatmkqlldaSKVAIASSFCGDFLKTDVTDKK 303
38899*******************999*******9887777765443322224444448888777766632 PP
>> tr|H2KZF5|H2KZF5_CAEEL Phosphoethanolamine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=pmt-1 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 9.3 0.0 0.00076 1.3 21 57 .. 74 107 .. 51 149 .. 0.69
2 ? 1.1 0.0 0.25 4.2e+02 85 114 .. 393 433 .. 333 455 .. 0.74
Alignments for each domain:
== domain 1 score: 9.3 bits; conditional E-value: 0.00076
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm 57
++k vvD+ga+ G ++ vl++ v++ D
tr|H2KZF5|H2KZF5_CAEEL 74 HNKDVVDIGAGIGRFTTVLAETA---RWVLSTDFIDS 107
4578***************9993...44777776444 PP
== domain 2 score: 1.1 bits; conditional E-value: 0.25
H............SSEEEEEE-------S-HHHHHHHHHHHH CS
FtsJ 85 e............rkvdlvvsDgapdvsgvhdldeylqsqLl 114
r+ v+sDga ++++ + +de++++++
tr|H2KZF5|H2KZF5_CAEEL 393 AteflstvddetiRQLPNVMSDGAKFITL-EPVDEVNEAEMK 433
2444444555555667789*****99998.777777776665 PP
>> sp|Q22053|FBRL_CAEEL rRNA 2'-O-methyltransferase fibrillarin OS=Caenorhabditis elegans OX=6239 GN=fib-1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.2 0.0 0.00019 0.32 14 97 .. 184 270 .. 171 310 .. 0.87
Alignments for each domain:
== domain 1 score: 11.2 bits; conditional E-value: 0.00019
HHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE CS
FtsJ 14 ekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikealserkvdlvvs 93
e + +kpg++ + lgaa G ++ +g++g v+av + +++p+v i d ++p + +++ vd++ s
sp|Q22053|FBRL_CAEEL 184 ENTH-IKPGTKLLYLGAASGTTVSHCSDVVGPEGIVYAVEFSHRsgrdllgvaKKRPNVVPIVEDARHPHKYRMLVG-----MVDVIFS 266
5666.899***********************99********988899999887788****************98886.....59***** PP
---- CS
FtsJ 94 Dgap 97
D+a
sp|Q22053|FBRL_CAEEL 267 DVAQ 270
*993 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (177 nodes)
Target sequences: 20008 (8229220 residues searched)
Passed MSV filter: 544 (0.0271891); expected 400.2 (0.02)
Passed bias filter: 466 (0.0232907); expected 400.2 (0.02)
Passed Vit filter: 56 (0.00279888); expected 20.0 (0.001)
Passed Fwd filter: 12 (0.00059976); expected 0.2 (1e-05)
Initial search space (Z): 20008 [actual number of targets]
Domain search space (domZ): 12 [number of targets reported over threshold]
# CPU time: 0.15u 0.01s 00:00:00.16 Elapsed: 00:00:00.07
# Mc/sec: 20808.17
//
[ok]