# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/FtsJ.hmm.txt # target sequence database: proteomes/Macaca_mulatta.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: FtsJ [M=177] Accession: PF01728.18 Description: FtsJ-like methyltransferase Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 4.2e-69 232.4 0.1 5.2e-69 232.1 0.1 1.1 1 tr|F7A6W8|F7A6W8_MACMU Putative tRNA (cytidine(32)/guan 2.3e-56 190.9 0.0 5.4e-56 189.7 0.0 1.7 1 tr|F7DBM6|F7DBM6_MACMU pre-rRNA processing protein FTSJ 1.7e-51 175.1 0.0 2e-51 174.8 0.0 1.1 1 tr|F6PKI3|F6PKI3_MACMU Putative ribosomal RNA methyltra 3e-37 128.7 0.0 5.8e-37 127.7 0.0 1.5 1 tr|F6VQ68|F6VQ68_MACMU Cap methyltransferase 1 OS=Macac 1.6e-31 110.0 0.1 1.3e-28 100.6 0.0 2.3 2 tr|F6VSN1|F6VSN1_MACMU Cap methyltransferase 2 OS=Macac 3.5e-07 30.7 0.0 7.3e-07 29.7 0.0 1.4 1 tr|F6SWB4|F6SWB4_MACMU NOP2/Sun RNA methyltransferase f 0.0028 18.0 0.0 0.0048 17.3 0.0 1.4 1 tr|F7GR59|F7GR59_MACMU NOP2/Sun RNA methyltransferase f 0.003 17.9 0.0 0.006 17.0 0.0 1.4 1 tr|F6ZSG5|F6ZSG5_MACMU NOP2 nucleolar protein OS=Macaca 0.0038 17.6 0.0 0.0066 16.8 0.0 1.3 1 tr|F7G8Y6|F7G8Y6_MACMU NOP2/Sun RNA methyltransferase f 0.004 17.5 0.0 0.014 15.7 0.0 1.8 1 tr|A0A1D5QYE6|A0A1D5QYE6_MACMU NOP2/Sun RNA methyltransferase f ------ inclusion threshold ------ 0.013 15.8 0.1 0.037 14.4 0.0 1.8 2 tr|A0A1D5QJG6|A0A1D5QJG6_MACMU Protein arginine methyltransfera 0.018 15.4 0.0 0.034 14.5 0.0 1.4 1 tr|F6XQN4|F6XQN4_MACMU NOP2/Sun RNA methyltransferase f 0.021 15.2 0.1 0.055 13.8 0.1 1.7 1 tr|A0A1D5RDW4|A0A1D5RDW4_MACMU Fibrillarin OS=Macaca mulatta OX 0.069 13.5 0.0 0.086 13.2 0.0 1.3 1 tr|G7MTJ5|G7MTJ5_MACMU 3-hydroxybutyrate dehydrogenase 0.088 13.1 0.0 0.22 11.8 0.0 1.7 1 tr|F7GFV2|F7GFV2_MACMU Protein-L-isoaspartate O-methylt 0.17 12.2 0.0 0.46 10.8 0.0 1.6 1 tr|F7EJI0|F7EJI0_MACMU NADH:ubiquinone oxidoreductase c 0.26 11.6 0.0 0.53 10.6 0.0 1.6 1 tr|F7H1A9|F7H1A9_MACMU Protein arginine N-methyltransfe Domain annotation for each sequence (and alignments): >> tr|F7A6W8|F7A6W8_MACMU Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Macaca mulatta OX=9544 G # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 232.1 0.1 4.2e-72 5.2e-69 1 177 [] 21 199 .. 21 199 .. 0.98 Alignments for each domain: == domain 1 score: 232.1 bits; conditional E-value: 4.2e-72 TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT.....-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHH CS FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga..kgkvvavDlqpmaplpgvttiqgditdpetiekikealse 85 +r+Rsa+KLl++d++f+lf+ ++++vDl+aaPG+wsqvl+q++g +g+vvavDlq maplpgv +iqgdit+ +t+++i +++++ tr|F7A6W8|F7A6W8_MACMU 21 WRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGqgSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKG 107 79*****************************************66556*************************************** PP SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEE CS FtsJ 86 rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseefl 172 ++dlvv+Dgapdv+g hd+dey+q+qLllaal++a+++lkpgg+fv+kifrg++++ l++ql+ fF++v ++kP+ssr++s e+f tr|F7A6W8|F7A6W8_MACMU 108 CPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLRVFFSSVLCAKPRSSRNSSIEAFA 194 *************************************************************************************** PP EEEEE CS FtsJ 173 vcrgf 177 vc+g+ tr|F7A6W8|F7A6W8_MACMU 195 VCQGY 199 **986 PP >> tr|F7DBM6|F7DBM6_MACMU pre-rRNA processing protein FTSJ3 OS=Macaca mulatta OX=9544 GN=FTSJ3 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 189.7 0.0 4.3e-59 5.4e-56 1 177 [] 24 200 .. 24 200 .. 0.99 Alignments for each domain: == domain 1 score: 189.7 bits; conditional E-value: 4.3e-59 TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSS CS FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserk 87 yrsRsa+KL++++ +f+++++ ++ +Dl+aaPGgw qv+++ + ++ +v+vDl p++plp+v t+q dit+++ ++++++ l+ k tr|F7DBM6|F7DBM6_MACMU 24 YRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110 9****************99************************999***************************************** PP EEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEE CS FtsJ 88 vdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvc 174 vd+v+ Dgap+v ++ d+y q++L l al+la++ l++gg+f++k+fr+++ + ll ++++F++v+ +kP++sr es+e+f+vc tr|F7DBM6|F7DBM6_MACMU 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVC 197 *************************************************************************************** PP EEE CS FtsJ 175 rgf 177 +gf tr|F7DBM6|F7DBM6_MACMU 198 QGF 200 *98 PP >> tr|F6PKI3|F6PKI3_MACMU Putative ribosomal RNA methyltransferase 2 OS=Macaca mulatta OX=9544 GN=MRM2 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 174.8 0.0 1.6e-54 2e-51 1 176 [. 52 236 .. 52 237 .. 0.96 Alignments for each domain: == domain 1 score: 174.8 bits; conditional E-value: 1.6e-54 TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT......-.....SEEEEEESS-----TT-EEE.E--TTSSSHHHH CS FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga...k.....gkvvavDlqpmaplpgvtti.qgditdpetiek 78 yr+Rsa+KLle++e++++++pg +v+D+gaaPG+wsqv++q+++a + g v++vDl ++ pl+g t++ +d+tdp+t ++ tr|F6PKI3|F6PKI3_MACMU 52 YRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAagtDpsspvGFVLGVDLLHIFPLEGATFLcPADVTDPRTSQR 138 9******************************************7765514456799******************99*********** PP HHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE------- CS FtsJ 79 ikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrs 165 i+e l + ++d+++sD+ap+ +g +dld+ + ++L+l l+++ ++l+p gtf++k++ g+++ +l ++l + F++v+++kP++sr+ tr|F6PKI3|F6PKI3_MACMU 139 ILEVLPGGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSMTPDILQPRGTFLCKTWAGSQSHRLQRRLTEEFQNVRIIKPEASRK 225 *************************************************************************************** PP ---EEEEEEEE CS FtsJ 166 esseeflvcrg 176 esse+++++++ tr|F6PKI3|F6PKI3_MACMU 226 ESSEVYFLATQ 236 *******9987 PP >> tr|F6VQ68|F6VQ68_MACMU Cap methyltransferase 1 OS=Macaca mulatta OX=9544 GN=CMTR1 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 127.7 0.0 4.7e-40 5.8e-37 2 176 .. 233 448 .. 232 449 .. 0.86 Alignments for each domain: == domain 1 score: 127.7 bits; conditional E-value: 4.7e-40 TSHHHHHHHHHHHHH-.-S-TT-E................EEEES-TT-HHHHHHTTT...-SEEEEEES.S--............. CS FtsJ 2 rsRsayKLleidekfk.lfkpgkt................vvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm............. 57 +R+a+K++++d f+ +f++ + + D++a+PGg+s+++l+r + ++k ++++l +p+ tr|F6VQ68|F6VQ68_MACMU 233 LNRAAMKMANMDFVFDrMFTNPRDsygkplvkdreaellyFADVCAGPGGFSEYVLWRKKWHAKGFGMTLkGPNdfkledfysasse 319 68*************8677633224667777777788888******************75589*******88888777666665554 PP ..---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE CS FtsJ 58 ..aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkif 136 +p g i gdit+pe+i ++++++ + ++v++ ++Dg+++v+g+++l+e+l+ qLll+++ +al+++++gg+f++k+f tr|F6VQ68|F6VQ68_MACMU 320 lfEPYYGEGGIdgDGDITRPENISAFRNFVLDntdrKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTF 406 4444445555599***********99876666666699************************************************* PP -.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEE CS FtsJ 137 r.geete.allkqlkkfFekvsvvkPkssrsesseeflvcrg 176 + ++ ++ +l++ l ++Fe+v ++kP +sr+++se+++vc+g tr|F6VQ68|F6VQ68_MACMU 407 DlFTPFSvGLVYLLYCCFERVCLFKPITSRPANSERYVVCKG 448 **999999********************************97 PP >> tr|F6VSN1|F6VSN1_MACMU Cap methyltransferase 2 OS=Macaca mulatta OX=9544 GN=CMTR2 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 100.6 0.0 1e-31 1.3e-28 3 176 .. 112 319 .. 110 320 .. 0.85 2 ! 7.3 0.1 0.0044 5.5 98 175 .. 611 689 .. 566 691 .. 0.89 Alignments for each domain: == domain 1 score: 100.6 bits; conditional E-value: 1e-31 SHHHHHHHHHHHHH--S-TT......-EEEEES-TT-HHHHHHTTT........-SEEEEEESS--...........---TT-EEE. CS FtsJ 3 sRsayKLleidekfklfkpg......ktvvDlgaaPGgwsqvllqrlga.....kgkvvavDlqpm...........aplpgvtti. 66 +++++K ei+ f l+ ++ + ++l+ aPG+++ l++ l+ ++ +va +l+p+ + tr|F6VSN1|F6VSN1_MACMU 112 TQAWCKFHEILCSFPLIPQEafqngkLNSLHLCEAPGAFIASLNHYLKShrfpcDWSWVANTLNPYheanddlmmimD-------Dr 191 5799999999999997743323333345******************966545445***********776665544441.......03 PP ...............E--TTSSSHHHHHHHHHHH.SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE- CS FtsJ 67 ...............qgditdpetiekikealse.rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr 137 +gdi++ + +++++s + v+lv++Dg++d++g+ +e+l s+L + + +al++l++gg+fvlk+f+ tr|F6VSN1|F6VSN1_MACMU 192 liantlhwwyfgpdnTGDIMTLKFLTGLQNFISSmATVHLVTADGSFDCQGNPGEQEALVSSLHYCEVVTALTTLGNGGSFVLKMFT 278 334445677999************9999999887788************************************************** PP .STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEE CS FtsJ 138 .geete.allkqlkkfFekvsvvkPkssrsesseeflvcrg 176 +e+++ +l++ l+++F++v+v+kP++s+ ++se+++vc+ tr|F6VSN1|F6VSN1_MACMU 279 mFEHCSiNLMYLLNCCFDQVHVFKPATSKAGNSEVYVVCLH 319 *9****9********************************86 PP == domain 2 score: 7.3 bits; conditional E-value: 0.0044 ---S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEE CS FtsJ 98 dvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr.geete.allkqlkkfFekvsvvkPkssrsesseeflvcr 175 ++s+ hd d + q +L+l l +l+ l +g++++l ++ ++++ +l+ l ++F+ ++ + P ss + + l+c tr|F6VSN1|F6VSN1_MACMU 611 SCSLLHDGDPTYQ-HLFLDCLLHSLRELHTGDVMILPVLScFTRFMaGLIFVLHSCFRFITFFCPTSSDPLRTCAVLLCV 689 6889999999999.7***********************9988888879*******************9887666666665 PP >> tr|F6SWB4|F6SWB4_MACMU NOP2/Sun RNA methyltransferase family member 6 OS=Macaca mulatta OX=9544 GN=NSUN6 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.7 0.0 5.9e-10 7.3e-07 21 149 .. 234 389 .. 222 393 .. 0.78 Alignments for each domain: == domain 1 score: 29.7 bits; conditional E-value: 5.9e-10 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--........---...TT-EEEE--TTSSSHHHHHHHHHHH.....SSEEEE CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm........apl...pgvttiqgditdpetiekikealse.....rkvdlv 91 pg++++Dl+aaPGg + ++ ++ +g v+a+D a+l + ++ ++ d t+ + ++++++ +e + +d + tr|F6SWB4|F6SWB4_MACMU 234 PGEKILDLCAAPGGKTTHIAALMHDQGEVIAMDKIFSkvekikqnALLlglNSIRAFCFDGTKAVKLDMVEDTEGEppflpESFDRI 320 8999*******************999*******9666567666544443444555559999*********99888899999888888 PP EE----.......---S-HHHHHHHHH.HHHHHHHHHHHHHEEEEEEEEEEEE-...STTHHHHHHHHG CS FtsJ 92 vsDgap.......dvsgvhdldeylqs.qLllaalelalkllkpggtfvlkifr...geeteallkqlk 149 + D ++ +++l+e+ + L ++ ++ a++llkp+g++v +++ e+ e+++ +l tr|F6SWB4|F6SWB4_MACMU 321 LLDAPCsgmgqrpNMACTWSLKELASYqPLQRKLFTAAVQLLKPEGVLVYSTCTitlAENEEQVAWALT 389 8885324444455888888888888865899******************88777666666667766655 PP >> tr|F7GR59|F7GR59_MACMU NOP2/Sun RNA methyltransferase family member 4 OS=Macaca mulatta OX=9544 GN=NSUN4 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.0 3.8e-06 0.0048 19 137 .. 171 311 .. 162 357 .. 0.71 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 3.8e-06 S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..---TT-EEE.....E--TTSSSHHHHHH......HHHHHSSEEEEE CS FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..aplpgvtti.....qgditdpetiekik......ealserkvdlvv 92 ++pg+ v+Dl+aaPGg + llq g ++ a Dl a l + i i+d + + + l++ d v+ tr|F7GR59|F7GR59_MACMU 171 LQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSTSriARL---QNIlhsyvPQEIRDGNRVRVTSwdgrkwGELEGDTYDRVL 253 578999******************.5547788888876533333...3222334666677666666333333333445568999999 PP E-------S-HHHHHHHH...............HHHHHHHHHHHHHHEEEEEEEEEEEE- CS FtsJ 93 sDgapdvsgvhdldeylq...............sqLllaalelalkllkpggtfvlkifr 137 D+ p+++ +h+l e + + L ++ l +l kpgg++v ++ tr|F7GR59|F7GR59_MACMU 254 VDV-PCTTDRHSLHEEENnifkrsrkkerqilpV-LQMQLLAAGLLATKPGGHVVYSTCS 311 999.588888888888887888888888777431.3333333344567888888876655 PP >> tr|F6ZSG5|F6ZSG5_MACMU NOP2 nucleolar protein OS=Macaca mulatta OX=9544 GN=NOP2 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.0 0.0 4.8e-06 0.006 21 132 .. 416 545 .. 395 564 .. 0.70 Alignments for each domain: == domain 1 score: 17.0 bits; conditional E-value: 4.8e-06 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHH.......SSEEEEEE------- CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse.......rkvdlvvsDgapdvs 100 + ++++D ++aPGg + +++q ++++g+++a D + ++++++ g+ + + +++ + ++ ++d v+ D + + tr|F6ZSG5|F6ZSG5_MACMU 416 EHERILDMCCAPGGKTSYMAQLMKNTGVILANDANA----ERLKSVVGNLHRLGVTNTVISHYDGrqfpkvvGGFDRVLLDAPCSGT 498 45679******************8878888877766....66666666666666666666555554555555567777777766556 PP S-HHHHHHHH...............HHHHHHHHHHHHHHEEEEEEEE CS FtsJ 101 gvhdldeylq...............sqLllaalelalkllkpggtfv 132 gv ++d +++ +Lll+a+ ++ k+gg +v tr|F6ZSG5|F6ZSG5_MACMU 499 GVISKDPTVKtnkdekdilrcahlqKELLLSAIDSVNATSKTGGYLV 545 66555555555555555566666555666666666666666666665 PP >> tr|F7G8Y6|F7G8Y6_MACMU NOP2/Sun RNA methyltransferase family member 5 OS=Macaca mulatta OX=9544 GN=NSUN5 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 0.0 5.3e-06 0.0066 21 74 .. 226 290 .. 208 332 .. 0.71 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 5.3e-06 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--......---...TT-EEE...E--TTSSS CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm......apl...pgvtti...qgditdpe 74 pg +v+D +aaPG+ + l+ l+++gk++a+Dl + l g+++ + d++ + tr|F7G8Y6|F7G8Y6_MACMU 226 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKrlasmaT-LlarAGISCCelaEEDFLAVS 290 7899*******************999********8874443321.122234444444455555444 PP >> tr|A0A1D5QYE6|A0A1D5QYE6_MACMU NOP2/Sun RNA methyltransferase family member 3 OS=Macaca mulatta OX=9544 GN=NSUN3 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.7 0.0 1.2e-05 0.014 20 147 .. 133 281 .. 112 289 .. 0.63 Alignments for each domain: == domain 1 score: 15.7 bits; conditional E-value: 1.2e-05 -TT-EEEEES-TT-HHHHHHTTT..............-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSS CS FtsJ 20 kpgktvvDlgaaPGgwsqvllqrl.......ga....kgkvvavDlqpmaplpgvttiqgditdpetiekikealserk 87 + g++v+Dl+aaPGg s llq ++ + k++ +l + p p +++i+ +d +++ ++ + tr|A0A1D5QYE6|A0A1D5QYE6_MACMU 133 RDGEKVLDLCAAPGGKSIALLQCAcpgylhcNEydslRLKWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEM---- 207 46789***************9998554444311333448888888888888888888877777776666666644.... PP EEEEEE----.................---S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-..STTHHHHHHH CS FtsJ 88 vdlvvsDgap.................dvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr..geeteallkq 147 +d v+ D +s +++l +lq++Ll++a++ l+pgg++v +++ ++e ++++++ tr|A0A1D5QYE6|A0A1D5QYE6_MACMU 208 FDKVLVDAPCsndrswlfssdsqkascRISQRRNL-PLLQIELLRSAIK----ALRPGGILVYSTCTlsKAENQDVISE 281 77777776434555555444433333233332222.2334555555555....59999999988887654444455555 PP >> tr|A0A1D5QJG6|A0A1D5QJG6_MACMU Protein arginine methyltransferase 3 OS=Macaca mulatta OX=9544 GN=PRMT3 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.6 0.1 9.9 1.2e+04 53 77 .. 295 319 .. 295 329 .. 0.75 2 ? 14.4 0.0 3e-05 0.037 17 71 .. 365 427 .. 350 488 .. 0.78 Alignments for each domain: == domain 1 score: -3.6 bits; conditional E-value: 9.9 ESS-----TT-EEEE--TTSSSHHH CS FtsJ 53 Dlqpmaplpgvttiqgditdpetie 77 Dlq+m+++ + ++++d+++ + tr|A0A1D5QJG6|A0A1D5QJG6_MACMU 295 DLQKMKQFAQDFVMNADVRTCSSST 319 8899999998889999998766555 PP == domain 2 score: 14.4 bits; conditional E-value: 3e-05 --S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--...........---.TT-EEEE--TT CS FtsJ 17 klfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm...........apl.pgvttiqgdit 71 ++f ++k v+D+g+++G s ++++ ga +kv++vD+ ++ + l + +t+i+g i tr|A0A1D5QJG6|A0A1D5QJG6_MACMU 365 HIF-KDKVVLDVGCGTGILSLFAAKA-GA-KKVLGVDQSEIlyqamdiirlnK-LeDTITLIKGKIE 427 556.6789******************.88.9********99886555544422.2355555555553 PP >> tr|F6XQN4|F6XQN4_MACMU NOP2/Sun RNA methyltransferase family member 2 OS=Macaca mulatta OX=9544 GN=NSUN2 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.5 0.0 2.7e-05 0.034 20 137 .. 175 322 .. 143 339 .. 0.68 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 2.7e-05 -TT-EEEEES-TT-HHHHHHTTT..........-SEEEEEESS--.........---...TT-EEEE--TTSSSHHH.HHHHHHHHS CS FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlga.......kgkvvavDlqpm.........apl...pgvttiqgditdpetie.kikealser 86 +p ++++D +aaPG+ + l + l+a +g v+a D+ + + + p + +++ d + + +++r tr|F6XQN4|F6XQN4_MACMU 175 RPHHKILDMCAAPGSKTTQLIEMLHAdmnvpfpEGFVIANDVDNKrcyllvhqaK-RlssPCIMVVNHDASSIPRLQiD----VDGR 256 57899*******************7766666666********7766788887643.23455555556666555555421....2222 PP S....EEEEEE----........---S-HHHHHHHH......HHHHHHHHHHHH...HHEEEEEEEEEEEE- CS FtsJ 87 k....vdlvvsDgap........dvsgvhdldeylq......sqLllaalelal...kllkpggtfvlkifr 137 k d +++D+ + +d ++ +qL +l++a+ ++l++gg +v ++ tr|F6XQN4|F6XQN4_MACMU 257 KeilfYDRILCDVPCsgdgtmrkN------IDVWKKwttlnsLQLHGLQLRIATrgaEQLAEGGRMVYSTCS 322 223338999999854443333433......444444555544788888888877333588889988876665 PP >> tr|A0A1D5RDW4|A0A1D5RDW4_MACMU Fibrillarin OS=Macaca mulatta OX=9544 GN=FBL PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.8 0.1 4.4e-05 0.055 13 99 .. 153 243 .. 141 300 .. 0.79 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 4.4e-05 HHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHH CS FtsJ 13 dekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikea 82 ++ + +kpg +v+ lgaa G ++ +g++g v+av + +++ ++ + d ++p + +++ tr|A0A1D5RDW4|A0A1D5RDW4_MACMU 153 VDQIH-IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRsgrdlinlaKKRTNIIPVIEDARHPHKYRMLIA- 229 57788.89**********************************999788666543344555555*********999885. PP HHHSSEEEEEE---.--- CS FtsJ 83 lserkvdlvvsDga.pdv 99 vd++ +D+a pd tr|A0A1D5RDW4|A0A1D5RDW4_MACMU 230 ----MVDVIFADVAqPDQ 243 ....49*******94443 PP >> tr|G7MTJ5|G7MTJ5_MACMU 3-hydroxybutyrate dehydrogenase 2 OS=Macaca mulatta OX=9544 GN=BDH2 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.2 0.0 6.9e-05 0.086 42 91 .. 28 78 .. 6 160 .. 0.74 Alignments for each domain: == domain 1 score: 13.2 bits; conditional E-value: 6.9e-05 T...-SEEEEEESS--.....---TT-EEEE--TTSSSHHHHHHHHHHHSSEEEE CS FtsJ 42 rlgakgkvvavDlqpm.....aplpgvttiqgditdpetiekikealserkvdlv 91 r +++kv+a D+++ ++ pg++t d+t++++i+++ + +++ vd+ tr|G7MTJ5|G7MTJ5_MACMU 28 R--EGAKVIATDINESklqelEKYPGIQTRVLDVTKKKQIDQFANEVER--VDVL 78 2..259********99665444449****************99998765..5543 PP >> tr|F7GFV2|F7GFV2_MACMU Protein-L-isoaspartate O-methyltransferase OS=Macaca mulatta OX=9544 GN=PCMT1 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 0.00018 0.22 16 96 .. 96 167 .. 88 217 .. 0.67 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.00018 H--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE--- CS FtsJ 16 fklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDga 96 f+ +++g +++D+g++ G + + ++ +g +gkv+++D + v ++++ + ls +v+lvv Dg tr|F7GFV2|F7GFV2_MACMU 96 FDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKE----LVDDSINNVRKDDPTL-----LSSGRVQLVVGDGR 167 555679**********************99********8663....1222222332222222.....22234666666655 PP >> tr|F7EJI0|F7EJI0_MACMU NADH:ubiquinone oxidoreductase complex assembly factor 5 OS=Macaca mulatta OX=9544 GN=NDUFAF5 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.8 0.0 0.00037 0.46 19 96 .. 87 160 .. 66 205 .. 0.68 Alignments for each domain: == domain 1 score: 10.8 bits; conditional E-value: 0.00037 S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEE..E--TTSSSHHHHHHHHHHHSSEEEEEE--- CS FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvtti..qgditdpetiekikealserkvdlvvsDga 96 f+ ++Dlg++ G +q+l++++ gk++ vD+ ++a+ + ++t + ++ + +e + + e+ +dlvvs ++ tr|F7EJI0|F7EJI0_MACMU 87 FRAFPLALDLGCGRGYIAQYLNKETI--GKLFQVDIAENALKNSLETEipTVSVL--ADEEFLP--FRENTFDLVVSSLS 160 4455569*****************74..89******9997776555542233333..3333222..34456777777666 PP >> tr|F7H1A9|F7H1A9_MACMU Protein arginine N-methyltransferase 6 OS=Macaca mulatta OX=9544 GN=PRMT6 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.6 0.0 0.00043 0.53 21 58 .. 82 119 .. 67 214 .. 0.83 Alignments for each domain: == domain 1 score: 10.6 bits; conditional E-value: 0.00043 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..- CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..a 58 +gktv+D+ga++G s +++q ga +v+av + + tr|F7H1A9|F7H1A9_MACMU 82 RGKTVLDVGAGTGILSIFCAQA-GA-RRVYAVEASAIwqQ 119 789*******************.88.9*****99888652 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (177 nodes) Target sequences: 21211 (10888574 residues searched) Passed MSV filter: 542 (0.0255528); expected 424.2 (0.02) Passed bias filter: 490 (0.0231012); expected 424.2 (0.02) Passed Vit filter: 49 (0.00231012); expected 21.2 (0.001) Passed Fwd filter: 17 (0.000801471); expected 0.2 (1e-05) Initial search space (Z): 21211 [actual number of targets] Domain search space (domZ): 17 [number of targets reported over threshold] # CPU time: 0.19u 0.01s 00:00:00.20 Elapsed: 00:00:00.08 # Mc/sec: 24090.97 // [ok]