# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/FtsJ.hmm.txt
# target sequence database: proteomes/Monodelphis_domestica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: FtsJ [M=177]
Accession: PF01728.18
Description: FtsJ-like methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.4e-69 231.4 0.0 1e-68 231.2 0.0 1.1 1 tr|F6Q075|F6Q075_MONDO Putative tRNA (cytidine(32)/guanosine
4.6e-56 190.0 0.1 8.4e-56 189.1 0.1 1.5 1 tr|F6UUX8|F6UUX8_MONDO pre-rRNA processing protein FTSJ3 OS=
8.7e-35 120.6 0.0 1.8e-34 119.6 0.0 1.6 1 tr|F7DTG4|F7DTG4_MONDO E3 ubiquitin-protein ligase RNF8 OS=M
7.1e-29 101.4 0.0 8.5e-27 94.6 0.0 2.3 2 tr|F6XIP7|F6XIP7_MONDO Cap methyltransferase 2 OS=Monodelphi
5e-07 30.2 0.0 1.2e-06 29.0 0.0 1.5 1 tr|F7FNT7|F7FNT7_MONDO NOP2/Sun RNA methyltransferase family
0.00041 20.8 0.0 0.00089 19.6 0.0 1.5 1 tr|F6U5C4|F6U5C4_MONDO Uncharacterized protein OS=Monodelphi
0.00094 19.6 0.0 0.0016 18.8 0.0 1.4 1 tr|F6WS57|F6WS57_MONDO NOP2/Sun RNA methyltransferase family
0.0043 17.4 0.0 0.0073 16.7 0.0 1.5 1 tr|F7EVA4|F7EVA4_MONDO Uncharacterized protein OS=Monodelphi
0.0066 16.8 0.1 0.017 15.5 0.0 1.7 2 tr|F7EYH0|F7EYH0_MONDO Protein arginine methyltransferase 3
0.0069 16.8 0.0 0.015 15.7 0.0 1.5 1 tr|F6QCU8|F6QCU8_MONDO NOP2/Sun RNA methyltransferase family
------ inclusion threshold ------
0.044 14.1 0.0 0.11 12.9 0.0 1.6 1 tr|F6YAE8|F6YAE8_MONDO Fibrillarin OS=Monodelphis domestica
0.077 13.3 0.0 0.13 12.6 0.0 1.3 1 tr|F6RHT5|F6RHT5_MONDO NOP2/Sun RNA methyltransferase family
0.13 12.6 0.0 0.23 11.8 0.0 1.4 1 tr|F6YIJ3|F6YIJ3_MONDO Uncharacterized protein OS=Monodelphi
0.14 12.5 0.0 0.38 11.1 0.0 1.8 1 tr|F7FVJ3|F7FVJ3_MONDO Protein-L-isoaspartate O-methyltransf
Domain annotation for each sequence (and alignments):
>> tr|F6Q075|F6Q075_MONDO Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Monodelphis domestica OX
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 231.2 0.0 6.6e-72 1e-68 1 177 [] 21 200 .. 21 200 .. 0.98
Alignments for each domain:
== domain 1 score: 231.2 bits; conditional E-value: 6.6e-72
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT......-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHH CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga...kgkvvavDlqpmaplpgvttiqgditdpetiekikeals 84
+r+Rsa+KLl++de+f+lf+ ++++vDl+aaPG+wsqvl+++lg+ + +vavDlq maplpgv +iqgdit+ +t+++i +++
tr|F6Q075|F6Q075_MONDO 21 WRARSAFKLLQLDEEFQLFSGVRRAVDLCAAPGSWSQVLSRKLGEdesPACIVAVDLQAMAPLPGVVQIQGDITKASTAQEIIGHFE 107
79*****************************************88554499************************************ PP
HSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEE CS
FtsJ 85 erkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseef 171
++++dlvv+Dgapdv+g hd+dey+q+qLllaal++a+++lkpgg+fv+kifrg++++ l++ql+ fF +v ++kP+ssr++s e+f
tr|F6Q075|F6Q075_MONDO 108 GQPADLVVCDGAPDVTGLHDIDEYIQAQLLLAALNIAIHVLKPGGSFVAKIFRGRDVTLLYSQLRIFFPDVVCAKPRSSRNSSIEAF 194
*************************************************************************************** PP
EEEEEE CS
FtsJ 172 lvcrgf 177
vcrgf
tr|F6Q075|F6Q075_MONDO 195 AVCRGF 200
****98 PP
>> tr|F6UUX8|F6UUX8_MONDO pre-rRNA processing protein FTSJ3 OS=Monodelphis domestica OX=13616 GN=FTSJ3 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 189.1 0.1 5.6e-59 8.4e-56 1 177 [] 24 200 .. 24 200 .. 0.99
Alignments for each domain:
== domain 1 score: 189.1 bits; conditional E-value: 5.6e-59
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSS CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserk 87
+rsRsa+KL++++ +f+++++ ++ +Dl+aaPGgw qv+++ + ++ +v+vDl p++p+p+v t+q dit+++ ++++++ l+ k
tr|F6UUX8|F6UUX8_MONDO 24 FRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVASKFMPVSSLIVGVDLVPIKPIPNVVTLQEDITTEKCRQALRKELKTWK 110
79***************99************************999***************************************** PP
EEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEE CS
FtsJ 88 vdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvc 174
vd+v+ Dgap+v ++ d+y q++L l al+la++ l++gg+f++k+fr+++ + ll ++++F++v+ +kP++sr+es+e+f++c
tr|F6UUX8|F6UUX8_MONDO 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGCFITKVFRSRDYQPLLWIFQQLFRHVQATKPQASRQESAEIFVIC 197
*************************************************************************************** PP
EEE CS
FtsJ 175 rgf 177
+gf
tr|F6UUX8|F6UUX8_MONDO 198 QGF 200
*98 PP
>> tr|F7DTG4|F7DTG4_MONDO E3 ubiquitin-protein ligase RNF8 OS=Monodelphis domestica OX=13616 GN=RNF8 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 119.6 0.0 1.2e-37 1.8e-34 2 175 .. 1119 1333 .. 1118 1335 .. 0.86
Alignments for each domain:
== domain 1 score: 119.6 bits; conditional E-value: 1.2e-37
TSHHHHHHHHHHHHH-.-S-.TT-E...............EEEES-TT-HHHHHHTTT...-SEEEEEES.S--........... CS
FtsJ 2 rsRsayKLleidekfk.lfk.pgkt...............vvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm........... 57
+R+a+K+++id f+ +f+ p + + D++a+PGg+s+++l+r + ++k ++++l +p+
tr|F7DTG4|F7DTG4_MONDO 1119 LNRAAMKMANIDFVFDrMFTnPKDSlgnsllkdrspellyFADVCAGPGGFSEYVLWRKKWHAKGFGMTLkGPNdfkledfyaas 1203
68*************8677634433666777777788888******************75589*******888888776666655 PP
....---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEE CS
FtsJ 58 ....aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfv 132
+p g i gd+t+p +i ++++++ + ++v+++++Dg+++v+ +++l+e+l+ qLll+++ ++l+++++gg+f+
tr|F7DTG4|F7DTG4_MONDO 1204 selfEPYYGDGGIdgDGDVTRPGNITAFRNFILDntdrKGVHFMMADGGFSVEKQENLQEILSKQLLLCQFLTGLSVIRTGGHFI 1288
544444445555599***********88866655566599********************************************* PP
EEEE-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEE CS
FtsJ 133 lkifr.geete.allkqlkkfFekvsvvkPkssrsesseeflvcr 175
+k+f+ ++ ++ +l++ l ++Fe+vs++kP +sr+++se+++vc+
tr|F7DTG4|F7DTG4_MONDO 1289 CKTFDlFTPFSvGLIYLLYTCFERVSLFKPVTSRPANSERYVVCK 1333
******999999********************************8 PP
>> tr|F6XIP7|F6XIP7_MONDO Cap methyltransferase 2 OS=Monodelphis domestica OX=13616 GN=CMTR2 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 94.6 0.0 5.6e-30 8.5e-27 4 176 .. 113 319 .. 110 320 .. 0.83
2 ? 4.5 0.1 0.026 40 97 176 .. 609 689 .. 575 690 .. 0.84
Alignments for each domain:
== domain 1 score: 94.6 bits; conditional E-value: 5.6e-30
HHHHHHHHHHHHH--S-TT......-EEEEES-TT-HHHHHHTTT........-SEEEEEESS--........---TT-EEE..... CS
FtsJ 4 RsayKLleidekfklfkpg......ktvvDlgaaPGgwsqvllqrlga.....kgkvvavDlqpm........aplpgvtti..... 66
++++K e++ f l+ ++ + v+l+ aPG+++ l++ l ++++va +l+p+ i
tr|F6XIP7|F6XIP7_MONDO 113 QAWCKFHEVLCSFPLIPQEafqngeLNSVHLCEAPGAFIASLNHYLRShnipcDWNWVANTLNPYheandnlmM-------Imddrl 192
688888888888886643323333355*****************9954444446***********755554440.......334444 PP
..............E--TTSSSHHHHHHHHHHH.SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-. CS
FtsJ 67 ..............qgditdpetiekikealse.rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr. 137
+gdi++ + ++ ++s+ + v+lv++Dg++d++g+ +e+l s L + + +al +l++gg+fvlk+f+
tr|F6XIP7|F6XIP7_MONDO 193 iantlpwwyfgpdnTGDIMTLKHLTGLQHFISNmSTVHLVTADGSFDCQGNPGEQEALVSPLHYCEVVTALMTLGNGGSFVLKMFTl 279
45555777777**9****999999999987777788*************************************************** PP
STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEE CS
FtsJ 138 geete.allkqlkkfFekvsvvkPkssrsesseeflvcrg 176
+e+++ +l++ l++ Fe+++v+kP++s+ ++se+++vc+
tr|F6XIP7|F6XIP7_MONDO 280 FEHCSiNLMYLLNCSFEEIHVFKPATSKAGNSEVYVVCLY 319
*****9********************************85 PP
== domain 2 score: 4.5 bits; conditional E-value: 0.026
----S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEE CS
FtsJ 97 pdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr.geete.allkqlkkfFekvsvvkPkssrsesseeflvcrg 176
+++s+ hd + q q +l + +l l++g++++l ++ ++++ +++ l ++F+ ++ P ss + s + l+c g
tr|F6XIP7|F6XIP7_MONDO 609 FCCSLLHDGKPEYQ-QVFLDCFLRSLPRLQKGDVLILPVLScFTRFMaGMVFVLHSCFRFITFSCPTSSEPLSTCAVLLCVG 689
45566666666666.5777777778999**********999888888799999*******************9999999977 PP
>> tr|F7FNT7|F7FNT7_MONDO NOP2/Sun RNA methyltransferase family member 6 OS=Monodelphis domestica OX=13616 GN=NSUN6 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.0 0.0 7.7e-10 1.2e-06 21 147 .. 234 385 .. 224 391 .. 0.73
Alignments for each domain:
== domain 1 score: 29.0 bits; conditional E-value: 7.7e-10
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..---.TT-EEEE--TTSSSHHHHHHHHHHH............SSEEEEE CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..apl.pgvttiqgditdpetiekikealse............rkvdlvv 92
pg++++D +aaPGg + ++ + +g v+a+D p +++ ++ ++q + + + k al++ + +d ++
tr|F7FNT7|F7FNT7_MONDO 234 PGEKILDMCAAPGGKTTHIAALMRDQGEVIAMDKIPSkvEKIkQNAALLQLNCIRAFCCNGTK-ALGKiedgqggppfspESFDRIL 319
8999*******************999********99866444456666666654444444222.23334445667888887888888 PP
E----.......---S-HHHHHHHHH.HHHHHHHHHHHHHEEEEEEEEEEEE-...STTHHHHHHH CS
FtsJ 93 sDgap.......dvsgvhdldeylqs.qLllaalelalkllkpggtfvlkifr...geeteallkq 147
D +++ +++l+e+++ L ++ +++a++llkpgg++v +++ e+ e+++ +
tr|F7FNT7|F7FNT7_MONDO 320 LDAPCsgmgqrpNMTYTWTLKEVMSYqPLQRKLFTVAVQLLKPGGVLVYSTCTitlAENEEQVAWA 385
8853244555559999999999999769********************887776656666666555 PP
>> tr|F6U5C4|F6U5C4_MONDO Uncharacterized protein OS=Monodelphis domestica OX=13616 GN=NSUN3 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.6 0.0 5.9e-07 0.00089 19 149 .. 130 282 .. 116 290 .. 0.68
Alignments for each domain:
== domain 1 score: 19.6 bits; conditional E-value: 5.9e-07
S-TT-EEEEES-TT-HHHHHHTTT..............-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE- CS
FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrl...........gakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsD 94
+++g++v+D +aaPGg s llq + ++k++ +l + p p +++i+ +d + i +++ + +d v+ D
tr|F6U5C4|F6U5C4_MONDO 130 IQNGERVLDMCAAPGGKSVALLQCAypgyfhcneydNLRSKWLKQTLESFIPQPMMNIIKVSELDGREIGDLQPEM----FDKVLVD 212
46899****************9999666666544332258999999999999999999988888888888888755....8888888 PP
---..........---S-HHHHHHHH.......HHHHHHHHHH...HHHHEEEEEEEEEEEE-..STTHHHHHHH.HG CS
FtsJ 95 gap..........dvsgvhdldeylq.......sqLllaalel...alkllkpggtfvlkifr..geeteallkq.lk 149
d +++ + + l +lel a+k l+pgg++v +++ ++e +++++q l+
tr|F6U5C4|F6U5C4_MONDO 213 APCsndrswlfssD----TQKAS--YrlnqrkeL--PLVQLELlrsAIKALRPGGSLVYSTCTlsKAENSEVISQvLN 282
64344444443221....22222..133455333..33333332236688********99999865555577777554 PP
>> tr|F6WS57|F6WS57_MONDO NOP2/Sun RNA methyltransferase family member 5 OS=Monodelphis domestica OX=13616 GN=NSUN5 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.8 0.0 1.1e-06 0.0016 21 96 .. 225 306 .. 206 364 .. 0.77
Alignments for each domain:
== domain 1 score: 18.8 bits; conditional E-value: 1.1e-06
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--......---...TT-EEE...E--TTSSSHHHHHHHHHHHSSEEEEEE-- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm......apl...pgvtti...qgditdpetiekikealserkvdlvvsDg 95
pg +v+D +aaPG+ + l+ l+++gk++a+Dl + + l gv++ + d+++ + + ++v+ ++ D
tr|F6WS57|F6WS57_MONDO 225 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAGrlaamaT-LltrAGVSCCeiaNEDFLSISPSNPRY-----SRVQYILLDP 305
7899*******************999********9996755432.133455555555566666555554222.....3466666665 PP
- CS
FtsJ 96 a 96
+
tr|F6WS57|F6WS57_MONDO 306 S 306
5 PP
>> tr|F7EVA4|F7EVA4_MONDO Uncharacterized protein OS=Monodelphis domestica OX=13616 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.7 0.0 4.8e-06 0.0073 21 96 .. 431 509 .. 351 581 .. 0.70
Alignments for each domain:
== domain 1 score: 16.7 bits; conditional E-value: 4.8e-06
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHH.......SSEEEEEE--- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse.......rkvdlvvsDga 96
+ ++++D ++aPGg + +++q ++++g+++a D + +++++ g+ + + ++i + ++ ++d v+ D
tr|F7EVA4|F7EVA4_MONDO 431 EHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAE----RLKSVVGNLHRLGVTNTIISHDDGrhfpkvvGGFDRVLLDAP 509
45679******************98888888887764....444444444444444444432222333334433555555544 PP
>> tr|F7EYH0|F7EYH0_MONDO Protein arginine methyltransferase 3 OS=Monodelphis domestica OX=13616 GN=PRMT3 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.9 0.1 4.9 7.5e+03 53 76 .. 189 212 .. 188 225 .. 0.75
2 ! 15.5 0.0 1.1e-05 0.017 17 66 .. 259 315 .. 241 355 .. 0.75
Alignments for each domain:
== domain 1 score: -2.9 bits; conditional E-value: 4.9
ESS-----TT-EEEE--TTSSSHH CS
FtsJ 53 Dlqpmaplpgvttiqgditdpeti 76
Dlq m+++ + ++++d+++ +
tr|F7EYH0|F7EYH0_MONDO 189 DLQRMKQFAQDFVMNADVRTNSSS 212
899999999999999999666544 PP
== domain 2 score: 15.5 bits; conditional E-value: 1.1e-05
--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..........---TT-EEE CS
FtsJ 17 klfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..........aplpgvtti 66
++f ++k v+D+g+++G s ++++ ga ++v++vD+ ++ ++l+g+ t+
tr|F7EYH0|F7EYH0_MONDO 259 HIF-KDKVVLDVGCGTGILSMFAAKA-GA-KQVIGVDQSEIiyqamdiirlNKLEGIITL 315
556.6789******************.88.99******9998855444333233344333 PP
>> tr|F6QCU8|F6QCU8_MONDO NOP2/Sun RNA methyltransferase family member 2 OS=Monodelphis domestica OX=13616 GN=NSUN2 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.7 0.0 9.8e-06 0.015 20 137 .. 181 328 .. 149 346 .. 0.69
Alignments for each domain:
== domain 1 score: 15.7 bits; conditional E-value: 9.8e-06
-TT-EEEEES-TT-HHHHHHTTT..........-SEEEEEESS--.........---...TT-EEEE--TTSSSHHHHHHHHHHHSS CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlga.......kgkvvavDlqpm.........apl...pgvttiqgditdpetiekikealserk 87
+p ++++D +aaPG+ + l + l+a +g v+a D+ + + + p + +++ d + + i ++++k
tr|F6QCU8|F6QCU8_MONDO 181 QPHHKILDMCAAPGSKTAQLIEMLHAdmnvsfpEGFVIANDVDNKrcyllvhqaK-RlssPCIMVVNHDASSIPRLQ-ID--MNGKK 263
57899*******************7766666666********7766888887743.334555555577766555555.22..23322 PP
....EEEEEE----........---S-HHHHHHHH......HHHHHHHHHHHH...HHEEEEEEEEEEEE- CS
FtsJ 88 ....vdlvvsDgap........dvsgvhdldeylq......sqLllaalelal...kllkpggtfvlkifr 137
d +++D+ + +d ++ +qL +l++a+ ++l++gg +v ++
tr|F6QCU8|F6QCU8_MONDO 264 evlfYDRILCDVPCsgdgtmrkN------IDVWKKwttlnsLQLHGLQLRIATrgvEQLAEGGRMVYSTCS 328
23339999***854454444443......444444555554888888888876222688899999977666 PP
>> tr|F6YAE8|F6YAE8_MONDO Fibrillarin OS=Monodelphis domestica OX=13616 GN=FBL PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.9 0.0 7.1e-05 0.11 13 98 .. 151 240 .. 139 295 .. 0.81
Alignments for each domain:
== domain 1 score: 12.9 bits; conditional E-value: 7.1e-05
HHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHHHHHSSEEE CS
FtsJ 13 dekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikealserkvdl 90
++ + ++pg +v+ lgaa G ++ +g++g v+av + +++ ++ + d ++p + +++ vd+
tr|F6YAE8|F6YAE8_MONDO 151 VDQIH-IRPGAKVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRsgrdlinvaKKRTNIIPVIEDARHPHKYRMLIG-----MVDV 231
57777.88**********************************999787665543344555555999999999998886.....59** PP
EEE---.-- CS
FtsJ 91 vvsDga.pd 98
+ +D+a pd
tr|F6YAE8|F6YAE8_MONDO 232 IFADVAqPD 240
****99444 PP
>> tr|F6RHT5|F6RHT5_MONDO NOP2/Sun RNA methyltransferase family member 4 OS=Monodelphis domestica OX=13616 GN=NSUN4 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.6 0.0 8.5e-05 0.13 19 132 .. 184 316 .. 176 339 .. 0.62
Alignments for each domain:
== domain 1 score: 12.6 bits; conditional E-value: 8.5e-05
S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----..TT-EEE.........E--TTSSSHHHHHHHHHHHSSEEEEEE- CS
FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmapl..pgvtti.........qgditdpetiekikealserkvdlvvsD 94
++pg+tv+Dl+a+PGg + ll g ++ a D+ + + ++v + q +t+++ ++ l+++ d v+ D
tr|F6RHT5|F6RHT5_MONDO 184 VQPGDTVLDLCAGPGGKTLALLLT-GCCRHLAANDISTSRTRrlKQV--LhsyvpqdvsQVRVTSQDGRK--WGDLERSTYDRVLVD 265
4699************99888877.4447788888877744423222..222353333344444443333..233556788888888 PP
------S-HHHHHHHH.............HHHHHHHHHHHH.HHEEEEEEEE CS
FtsJ 95 gapdvsgvhdldeylq.............sqLllaalelal.kllkpggtfv 132
+ +++ +h++ e + + +l+ +l +a kpgg+ v
tr|F6RHT5|F6RHT5_MONDO 266 VP-CTTDRHSVLEEDNnifkrsrkverqmMPMLQVQLLVAGlLATKPGGVAV 316
84.6666655555555466666666666555555555554324555666655 PP
>> tr|F6YIJ3|F6YIJ3_MONDO Uncharacterized protein OS=Monodelphis domestica OX=13616 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.8 0.0 0.00015 0.23 19 42 .. 129 152 .. 115 160 .. 0.86
Alignments for each domain:
== domain 1 score: 11.8 bits; conditional E-value: 0.00015
S-TT-EEEEES-TT-HHHHHHTTT CS
FtsJ 19 fkpgktvvDlgaaPGgwsqvllqr 42
+++g++v+D +aaPGg s llq
tr|F6YIJ3|F6YIJ3_MONDO 129 LQNGERVLDMCAAPGGKSVALLQC 152
56899***********98888875 PP
>> tr|F7FVJ3|F7FVJ3_MONDO Protein-L-isoaspartate O-methyltransferase OS=Monodelphis domestica OX=13616 GN=PCMT1 PE=3 SV
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.1 0.0 0.00025 0.38 16 57 .. 139 180 .. 131 250 .. 0.75
Alignments for each domain:
== domain 1 score: 11.1 bits; conditional E-value: 0.00025
H--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-- CS
FtsJ 16 fklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm 57
f+ ++ g +++D+g++ G + + ++ +ga+gkv+++D +
tr|F7FVJ3|F7FVJ3_MONDO 139 FDQLHDGAKALDVGSGSGILTACFARMVGATGKVIGIDHIKE 180
45567999******************************8553 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (177 nodes)
Target sequences: 21272 (11266248 residues searched)
Passed MSV filter: 549 (0.0258086); expected 425.4 (0.02)
Passed bias filter: 486 (0.0228469); expected 425.4 (0.02)
Passed Vit filter: 43 (0.00202144); expected 21.3 (0.001)
Passed Fwd filter: 14 (0.000658142); expected 0.2 (1e-05)
Initial search space (Z): 21272 [actual number of targets]
Domain search space (domZ): 14 [number of targets reported over threshold]
# CPU time: 0.19u 0.01s 00:00:00.20 Elapsed: 00:00:00.08
# Mc/sec: 24926.57
//
[ok]