# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/FtsJ.hmm.txt
# target sequence database: proteomes/Pan_troglodytes.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: FtsJ [M=177]
Accession: PF01728.18
Description: FtsJ-like methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.7e-69 232.1 0.1 7e-69 231.8 0.1 1.1 1 tr|K7C690|K7C690_PANTR Putative tRNA (cytidine(32)/guan
4.7e-56 190.0 0.0 8.9e-56 189.1 0.0 1.5 1 tr|K7DSE9|K7DSE9_PANTR pre-rRNA processing protein FTSJ
1.6e-52 178.5 0.0 2.1e-52 178.1 0.0 1.1 1 tr|H2QU32|H2QU32_PANTR FtsJ homolog 2 OS=Pan troglodyte
3e-37 128.8 0.0 6.3e-37 127.7 0.0 1.6 1 tr|H2QSX8|H2QSX8_PANTR CMTR1 isoform 2 OS=Pan troglodyt
1.5e-07 32.1 0.0 3.4e-07 30.9 0.0 1.5 1 tr|H2Q1P7|H2Q1P7_PANTR NOP2/Sun RNA methyltransferase f
0.0022 18.5 0.0 0.0035 17.8 0.0 1.3 1 tr|H2PYY8|H2PYY8_PANTR NOP2/Sun RNA methyltransferase f
0.0022 18.5 0.0 0.0043 17.5 0.0 1.4 1 tr|A0A2J8JEW0|A0A2J8JEW0_PANTR NOP2 isoform 16 OS=Pan troglodyt
0.0023 18.4 0.0 0.0035 17.8 0.0 1.3 1 tr|A0A2I3SHR4|A0A2I3SHR4_PANTR Uncharacterized protein OS=Pan t
0.0023 18.4 0.0 0.0036 17.8 0.0 1.3 1 tr|A0A2I3TKF9|A0A2I3TKF9_PANTR Uncharacterized protein OS=Pan t
0.0032 17.9 0.0 0.0055 17.2 0.0 1.4 1 tr|H2QUP2|H2QUP2_PANTR NOP2/Sun RNA methyltransferase f
0.0044 17.5 0.1 0.013 16.0 0.0 1.9 2 tr|H2Q3A8|H2Q3A8_PANTR PRMT3 isoform 3 OS=Pan troglodyt
0.0048 17.4 0.0 0.017 15.6 0.0 1.8 1 tr|H2QMZ2|H2QMZ2_PANTR NOP2/Sun RNA methyltransferase f
------ inclusion threshold ------
0.019 15.4 0.0 0.036 14.5 0.0 1.4 1 tr|H2R3L8|H2R3L8_PANTR NOP2/Sun RNA methyltransferase f
0.026 15.0 0.1 0.067 13.7 0.1 1.7 1 tr|A0A2I3RF95|A0A2I3RF95_PANTR Fibrillarin OS=Pan troglodytes O
0.028 14.9 0.1 0.075 13.5 0.1 1.7 1 tr|A0A2I3RSU9|A0A2I3RSU9_PANTR Uncharacterized protein OS=Pan t
0.07 13.6 0.0 0.11 12.9 0.0 1.3 1 tr|H2QHP4|H2QHP4_PANTR tRNA methyltransferase 61B OS=Pa
0.12 12.8 0.0 0.34 11.3 0.0 1.7 1 tr|K7B228|K7B228_PANTR Protein-L-isoaspartate O-methylt
0.13 12.7 0.0 0.16 12.4 0.0 1.3 1 tr|K7CRE4|K7CRE4_PANTR 3-hydroxybutyrate dehydrogenase
0.25 11.8 0.1 2.8 8.4 0.1 2.1 2 tr|H2QL94|H2QL94_PANTR TRM2 tRNA methyltransferase 2 ho
0.28 11.6 0.0 0.58 10.6 0.0 1.6 1 tr|H2PZI7|H2PZI7_PANTR PRMT6 isoform 1 OS=Pan troglodyt
Domain annotation for each sequence (and alignments):
>> tr|K7C690|K7C690_PANTR Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Pan troglodytes OX=9598
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 231.8 0.1 6.1e-72 7e-69 1 177 [] 21 199 .. 21 199 .. 0.98
Alignments for each domain:
== domain 1 score: 231.8 bits; conditional E-value: 6.1e-72
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT.....-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHH CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga..kgkvvavDlqpmaplpgvttiqgditdpetiekikealse 85
+r+Rsa+KLl++d++f+lf+ ++++vDl+aaPG+wsqvl+q++g +g+vvavDlq maplpgv +iqgdit+ +t+++i +++++
tr|K7C690|K7C690_PANTR 21 WRARSAFKLLQLDKEFQLFQGVTRAVDLCAAPGSWSQVLSQKIGGqgSGHVVAVDLQAMAPLPGVVQIQGDITQLSTAKEIIQHFKG 107
79*****************************************66556*************************************** PP
SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEE CS
FtsJ 86 rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseefl 172
++dlvv+Dgapdv+g hd+dey+q+qLllaal++a+++lkpgg+fv+kifrg++++ l++ql+ fF++v ++kP+ssr++s e+f
tr|K7C690|K7C690_PANTR 108 CPADLVVCDGAPDVTGLHDVDEYMQAQLLLAALNIATHVLKPGGCFVAKIFRGRDVTLLYSQLQVFFSSVLCAKPRSSRNSSIEAFA 194
*************************************************************************************** PP
EEEEE CS
FtsJ 173 vcrgf 177
vc+g+
tr|K7C690|K7C690_PANTR 195 VCQGY 199
**986 PP
>> tr|K7DSE9|K7DSE9_PANTR pre-rRNA processing protein FTSJ3 OS=Pan troglodytes OX=9598 GN=FTSJ3 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 189.1 0.0 7.7e-59 8.9e-56 1 177 [] 24 200 .. 24 200 .. 0.99
Alignments for each domain:
== domain 1 score: 189.1 bits; conditional E-value: 7.7e-59
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSS CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserk 87
yrsRsa+KL++++ +f+++++ ++ +Dl+aaPGgw qv+++ + ++ +v+vDl p++plp+v t+q dit+++ ++++++ l+ k
tr|K7DSE9|K7DSE9_PANTR 24 YRSRSAFKLIQLNRRFQFLQKARALLDLCAAPGGWLQVAAKFMPVSSLIVGVDLVPIKPLPNVVTLQEDITTERCRQALRKELKTWK 110
9****************99************************999***************************************** PP
EEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEE CS
FtsJ 88 vdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvc 174
vd+v+ Dgap+v ++ d+y q++L l al+la++ l++gg+f++k+fr+++ + ll ++++F++v+ +kP++sr es+e+f+vc
tr|K7DSE9|K7DSE9_PANTR 111 VDVVLNDGAPNVGASWVHDAYSQAHLTLMALRLACDFLARGGSFITKVFRSRDYQPLLWIFQQLFRRVQATKPQASRHESAEIFVVC 197
*************************************************************************************** PP
EEE CS
FtsJ 175 rgf 177
+gf
tr|K7DSE9|K7DSE9_PANTR 198 QGF 200
*98 PP
>> tr|H2QU32|H2QU32_PANTR FtsJ homolog 2 OS=Pan troglodytes OX=9598 GN=MRM2 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 178.1 0.0 1.8e-55 2.1e-52 1 176 [. 52 236 .. 52 237 .. 0.96
Alignments for each domain:
== domain 1 score: 178.1 bits; conditional E-value: 1.8e-55
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT......-.....SEEEEEESS-----TT-EEE.E--TTSSSHHHH CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga...k.....gkvvavDlqpmaplpgvtti.qgditdpetiek 78
yr+Rsa+KLle++e++++++pg +v+D+gaaPG+wsqv++q+++a + g v++vDl ++ pl+g t++ +d+tdp+t ++
tr|H2QU32|H2QU32_PANTR 52 YRCRSAFKLLEVNERHQILRPGLRVLDCGAAPGAWSQVAVQKVNAagtDpsspvGFVLGVDLLHIFPLEGATFLcPADVTDPRTSQR 138
9******************************************7765514456799******************99*********** PP
HHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE------- CS
FtsJ 79 ikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrs 165
i+e l + ++d+++sD+ap+ +g +dld+ + ++L+l l+++ ++l+pggtf++k++ g+++ +l ++l + F++v+++kP++sr+
tr|H2QU32|H2QU32_PANTR 139 ILEVLPGGRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGSQSRRLQRRLTEEFQNVRIIKPEASRK 225
*************************************************************************************** PP
---EEEEEEEE CS
FtsJ 166 esseeflvcrg 176
esse+++++++
tr|H2QU32|H2QU32_PANTR 226 ESSEVYFLATQ 236
*******9987 PP
>> tr|H2QSX8|H2QSX8_PANTR CMTR1 isoform 2 OS=Pan troglodytes OX=9598 GN=CMTR1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 127.7 0.0 5.5e-40 6.3e-37 2 176 .. 233 448 .. 232 449 .. 0.86
Alignments for each domain:
== domain 1 score: 127.7 bits; conditional E-value: 5.5e-40
TSHHHHHHHHHHHHH-.-S-TT-E................EEEES-TT-HHHHHHTTT...-SEEEEEES.S--............. CS
FtsJ 2 rsRsayKLleidekfk.lfkpgkt................vvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm............. 57
+R+a+K++++d f+ +f++ + + D++a+PGg+s+++l+r + ++k ++++l +p+
tr|H2QSX8|H2QSX8_PANTR 233 LNRAAMKMANMDFVFDrMFTNPRDsygkplvkdreaellyFADVCAGPGGFSEYVLWRKKWHAKGFGMTLkGPNdfkledfysasse 319
68*************8677633224667777777788888******************75589*******88888777666665554 PP
..---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE CS
FtsJ 58 ..aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkif 136
+p g i gdit+pe+i ++++++ + ++v++ ++Dg+++v+g+++l+e+l+ qLll+++ +al+++++gg+f++k+f
tr|H2QSX8|H2QSX8_PANTR 320 lfEPYYGEGGIdgDGDITRPENISAFRNFVLDntdrKGVHFLMADGGFSVEGQENLQEILSKQLLLCQFLMALSIVRTGGHFICKTF 406
4444445555599***********99876666666699************************************************* PP
-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEE CS
FtsJ 137 r.geete.allkqlkkfFekvsvvkPkssrsesseeflvcrg 176
+ ++ ++ +l++ l ++Fe+v ++kP +sr+++se+++vc+g
tr|H2QSX8|H2QSX8_PANTR 407 DlFTPFSvGLVYLLYCCFERVCLFKPITSRPANSERYVVCKG 448
**999999********************************97 PP
>> tr|H2Q1P7|H2Q1P7_PANTR NOP2/Sun RNA methyltransferase family member 6 OS=Pan troglodytes OX=9598 GN=NSUN6 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 30.9 0.0 2.9e-10 3.4e-07 21 149 .. 229 384 .. 218 388 .. 0.77
Alignments for each domain:
== domain 1 score: 30.9 bits; conditional E-value: 2.9e-10
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--........---...TT-EEEE--TTSSSHHHHHHHHHHH.....SSEEEE CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm........apl...pgvttiqgditdpetiekikealse.....rkvdlv 91
pg++++Dl+aaPGg + ++ ++ +g v+a+D + a+l + ++ ++ d t+ + ++++++ +e + +d +
tr|H2Q1P7|H2Q1P7_PANTR 229 PGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNkvekikqnALLlglNSIRAFCFDGTKAVKLDMVEDTEGEppflpESFDRI 315
8999*******************999*******9555557666543443444555559999**********9888899999889999 PP
EE----.......---S-HHHHHHHHH.HHHHHHHHHHHHHEEEEEEEEEEEE-...STTHHHHHHHHG CS
FtsJ 92 vsDgap.......dvsgvhdldeylqs.qLllaalelalkllkpggtfvlkifr...geeteallkqlk 149
+ D ++ +++l+e+ + L ++ ++ a++llkp+g++v +++ e+ e+++ +l
tr|H2Q1P7|H2Q1P7_PANTR 316 LLDAPCsgmgqrpNMASTWSLKEVASYqPLQRKLFTAAVQLLKPEGVLVYSTCTitlAENEEQVAWALT 384
9886423444444777777777777765999******************88777666666667766655 PP
>> tr|H2PYY8|H2PYY8_PANTR NOP2/Sun RNA methyltransferase family member 4 OS=Pan troglodytes OX=9598 GN=NSUN4 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.8 0.0 3.1e-06 0.0035 19 136 .. 171 310 .. 161 347 .. 0.70
Alignments for each domain:
== domain 1 score: 17.8 bits; conditional E-value: 3.1e-06
S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..---.TT-EEE.E--TTSSSHHHHHH......HHHHHSSEEEEEE-- CS
FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..apl.pgvtti.qgditdpetiekik......ealserkvdlvvsDg 95
++pg+ v+Dl+aaPGg + llq g ++ a Dl p a l + ++++ i+d ++ + + l++ d v+ D+
tr|H2PYY8|H2PYY8_PANTR 171 LQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSriARLqKILHSYvPEEIRDGNQVRVTSwdgrkwGELEGDTYDRVLVDV 256
578999******************.555889999**998543333333333677777777776333333333445668999999999 PP
-----S-HHHHHHHH..................HHHHHHHHHHHHHHEEEEEEEEEEEE CS
FtsJ 96 apdvsgvhdldeylq..................sqLllaalelalkllkpggtfvlkif 136
p+++ +h+l e + +qL l +l kpgg++v ++
tr|H2PYY8|H2PYY8_PANTR 257 -PCTTDRHSLHEEENnifkrsrkkerqilpvlqVQL----LAAGLLATKPGGHVVYSTC 310
.58888888888887777787777666533222222....2223345678888876665 PP
>> tr|A0A2J8JEW0|A0A2J8JEW0_PANTR NOP2 isoform 16 OS=Pan troglodytes OX=9598 GN=NOP2 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.5 0.0 3.7e-06 0.0043 21 132 .. 417 546 .. 396 566 .. 0.71
Alignments for each domain:
== domain 1 score: 17.5 bits; conditional E-value: 3.7e-06
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHH.......SSEEEEE CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealse.......rkvdlvv 92
+ ++++D ++aPGg + +++q ++++g+++a D + ++++++ g+ + + ++i + ++ ++d v+
tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 417 EHERILDMCCAPGGKTSYMAQLMKNTGVILANDANA----ERLKSVVGNLHRLGVTNTIISHYDGrqfpkvvGGFDRVL 491
45679*****************98877777777766....677777777777777777776666656666665577777 PP
E-------S-HHHHHHHH...............HHHHHHHHHHHHHHEEEEEEEE CS
FtsJ 93 sDgapdvsgvhdldeylq...............sqLllaalelalkllkpggtfv 132
D + +gv ++d +++ +Lll+a+ ++ k+gg +v
tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 492 LDAPCSGTGVISKDPAVKtnkdekdilrcahlqKELLLSAIDSVNATSKTGGYLV 546
7766555565555555555555555555666655677777777667777777666 PP
>> tr|A0A2I3SHR4|A0A2I3SHR4_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.8 0.0 3e-06 0.0035 21 99 .. 208 292 .. 191 337 .. 0.78
Alignments for each domain:
== domain 1 score: 17.8 bits; conditional E-value: 3e-06
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--......---...TT-EEE...E--TTSSSHHHHHHHHHHHSS CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm......apl...pgvtti...qgditdpetiekikealserk 87
pg +v+D +aaPG+ + l+ l+++gk++a+Dl + l gv++ + d++ + + r+
tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 208 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKrlasmaT-LlarAGVSCCelaEEDFLAVSPLDPRY-----RE 280
7899*******************999********8875655431.134466666666677777777666333.....35 PP
EEEEEE------ CS
FtsJ 88 vdlvvsDgapdv 99
v+ v+ D + +
tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 281 VHYVLLDPSCSG 292
777777766544 PP
>> tr|A0A2I3TKF9|A0A2I3TKF9_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.8 0.0 3.1e-06 0.0036 21 99 .. 208 292 .. 191 330 .. 0.78
Alignments for each domain:
== domain 1 score: 17.8 bits; conditional E-value: 3.1e-06
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--......---...TT-EEE...E--TTSSSHHHHHHHHHHHSS CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm......apl...pgvtti...qgditdpetiekikealserk 87
pg +v+D +aaPG+ + l+ l+++gk++a+Dl + l gv++ + d++ + + r+
tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 208 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKrlasmaT-LlarAGVSCCelaEEDFLAVSPLDPRY-----RE 280
7899*******************999********8875655431.134466666666677777777666333.....35 PP
EEEEEE------ CS
FtsJ 88 vdlvvsDgapdv 99
v+ v+ D + +
tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 281 VHYVLLDPSCSG 292
777777766544 PP
>> tr|H2QUP2|H2QUP2_PANTR NOP2/Sun RNA methyltransferase family member 5 OS=Pan troglodytes OX=9598 GN=NSUN5 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.2 0.0 4.8e-06 0.0055 21 96 .. 226 307 .. 208 345 .. 0.75
Alignments for each domain:
== domain 1 score: 17.2 bits; conditional E-value: 4.8e-06
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--......---...TT-EEE...E--TTSSSHHHHHHHHHHHSSEEEEEE-- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm......apl...pgvtti...qgditdpetiekikealserkvdlvvsDg 95
pg +v+D +aaPG+ + l+ l+++gk++a+Dl + l gv++ + d++ + + r+v+ ++ D
tr|H2QUP2|H2QUP2_PANTR 226 PGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKrlasmaT-LlarAGVSCCelaEEDFLAVSPSDPRY-----REVHYILLDP 306
7899*******************999********8875554431.123456666566666666665555222.....3466666665 PP
- CS
FtsJ 96 a 96
+
tr|H2QUP2|H2QUP2_PANTR 307 S 307
5 PP
>> tr|H2Q3A8|H2Q3A8_PANTR PRMT3 isoform 3 OS=Pan troglodytes OX=9598 GN=PRMT3 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.6 0.1 5.8 6.6e+03 53 77 .. 182 206 .. 181 219 .. 0.78
2 ! 16.0 0.0 1.1e-05 0.013 17 71 .. 252 314 .. 234 390 .. 0.79
Alignments for each domain:
== domain 1 score: -2.6 bits; conditional E-value: 5.8
ESS-----TT-EEEE--TTSSSHHH CS
FtsJ 53 Dlqpmaplpgvttiqgditdpetie 77
Dlq+m+++ + ++++d+++ +
tr|H2Q3A8|H2Q3A8_PANTR 182 DLQKMKQFAQDFVMHTDVRTCSSST 206
8999999999999999998766555 PP
== domain 2 score: 16.0 bits; conditional E-value: 1.1e-05
--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--...........---.TT-EEEE--TT CS
FtsJ 17 klfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm...........apl.pgvttiqgdit 71
++f ++k v+D+g+++G s ++++ ga +kv++vD+ ++ + l + +t+i+g i
tr|H2Q3A8|H2Q3A8_PANTR 252 HIF-KDKVVLDVGCGTGILSMFAAKA-GA-KKVLGVDQSEIlyqamdiirlnK-LeDTITLIKGKIE 314
556.6789******************.88.9********99886555544422.2355555555553 PP
>> tr|H2QMZ2|H2QMZ2_PANTR NOP2/Sun RNA methyltransferase family member 3 OS=Pan troglodytes OX=9598 GN=NSUN3 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.6 0.0 1.5e-05 0.017 20 146 .. 130 277 .. 111 285 .. 0.63
Alignments for each domain:
== domain 1 score: 15.6 bits; conditional E-value: 1.5e-05
-TT-EEEEES-TT-HHHHHHTTT..............-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-- CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrl.......ga....kgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDg 95
+ g++v+Dl+aaPGg s llq ++ + +++ +l + p p +++i+ +d +++ ++ + +d v+ D
tr|H2QMZ2|H2QMZ2_PANTR 130 RDGEKVLDLCAAPGGKSIALLQCAcpgylhcNEydslRLRWLRQTLESFIPQPLINVIKVSELDGRKMGDAQPEM----FDKVLVDA 212
56889***************9998554444311333448888888888888888888877777766666666644....77777776 PP
--.................---S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-..STTHHHHHH CS
FtsJ 96 ap.................dvsgvhdldeylqsqLllaalelalkllkpggtfvlkifr..geeteallk 146
+s +++l +lq++Ll++a++ l+pgg++v +++ ++e +++++
tr|H2QMZ2|H2QMZ2_PANTR 213 PCsndrswlfssdsqkascRISQRRNL-PLLQIELLRSAIK----ALRPGGILVYSTCTlsKAENQDVIS 277
434555555444333333233332222.2334555555555....4999999998888764334335555 PP
>> tr|H2R3L8|H2R3L8_PANTR NOP2/Sun RNA methyltransferase family member 2 OS=Pan troglodytes OX=9598 GN=NSUN2 PE=2 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.5 0.0 3.2e-05 0.036 20 137 .. 175 322 .. 143 339 .. 0.68
Alignments for each domain:
== domain 1 score: 14.5 bits; conditional E-value: 3.2e-05
-TT-EEEEES-TT-HHHHHHTTT..........-SEEEEEESS--.........---...TT-EEEE--TTSSSHHH.HHHHHHHHS CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlga.......kgkvvavDlqpm.........apl...pgvttiqgditdpetie.kikealser 86
+p ++++D +aaPG+ + l + l+a +g v+a D+ + + + p + +++ d + + +++r
tr|H2R3L8|H2R3L8_PANTR 175 RPHHKILDMCAAPGSKTTQLIEMLHAdmnvpfpEGFVIANDVDNKrcyllvhqaK-RlssPCIMVVNHDASSIPRLQiD----VDGR 256
57899*******************7766666666********7766788887643.23455555556666555555421....2222 PP
S....EEEEEE----........---S-HHHHHHHH......HHHHHHHHHHHH...HHEEEEEEEEEEEE- CS
FtsJ 87 k....vdlvvsDgap........dvsgvhdldeylq......sqLllaalelal...kllkpggtfvlkifr 137
k d +++D+ + +d ++ +qL +l++a+ ++l++gg +v ++
tr|H2R3L8|H2R3L8_PANTR 257 KeilfYDRILCDVPCsgdgtmrkN------IDVWKKwttlnsLQLHGLQLRIATrgaEQLAEGGRMVYSTCS 322
223338999999854443333433......444444555544788888888877333588889988876665 PP
>> tr|A0A2I3RF95|A0A2I3RF95_PANTR Fibrillarin OS=Pan troglodytes OX=9598 GN=FBL PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.7 0.1 5.8e-05 0.067 13 99 .. 167 257 .. 155 311 .. 0.79
Alignments for each domain:
== domain 1 score: 13.7 bits; conditional E-value: 5.8e-05
HHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHH CS
FtsJ 13 dekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikea 82
++ + +kpg +v+ lgaa G ++ +g++g v+av + +++ ++ + d ++p + +++
tr|A0A2I3RF95|A0A2I3RF95_PANTR 167 VDQIH-IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRsgrdlinlaKKRTNIIPVIEDARHPHKYRMLIA- 243
57788.89**********************************999788666543344555555*********999885. PP
HHHSSEEEEEE---.--- CS
FtsJ 83 lserkvdlvvsDga.pdv 99
vd++ +D+a pd
tr|A0A2I3RF95|A0A2I3RF95_PANTR 244 ----MVDVIFADVAqPDQ 257
....49*******94443 PP
>> tr|A0A2I3RSU9|A0A2I3RSU9_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.5 0.1 6.5e-05 0.075 13 99 .. 152 242 .. 140 290 .. 0.78
Alignments for each domain:
== domain 1 score: 13.5 bits; conditional E-value: 6.5e-05
HHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHH CS
FtsJ 13 dekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikea 82
++ + +kpg +v+ lgaa G ++ +g++g v+av + +++ ++ + d ++p + +++
tr|A0A2I3RSU9|A0A2I3RSU9_PANTR 152 VDQIH-IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRsgrdlinlaKKRTNIIPVIEDAQHPHKYRMLIA- 228
57788.89**********************************999788665443344555555999999999998884. PP
HHHSSEEEEEE---.--- CS
FtsJ 83 lserkvdlvvsDga.pdv 99
vd++ +D+a pd
tr|A0A2I3RSU9|A0A2I3RSU9_PANTR 229 ----MVDVIFADVAqPDQ 242
....59*******94433 PP
>> tr|H2QHP4|H2QHP4_PANTR tRNA methyltransferase 61B OS=Pan troglodytes OX=9598 GN=TRMT61B PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.9 0.0 9.6e-05 0.11 14 117 .. 239 381 .. 234 415 .. 0.67
Alignments for each domain:
== domain 1 score: 12.9 bits; conditional E-value: 9.6e-05
HHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--......................---.TT-EEEE--TTSSSHHH CS
FtsJ 14 ekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm......................apl.pgvttiqgditdpetie 77
+ ++ ++pg+tv++ g++ Gg s +l++ +g +g+v+++ +++ + ++v +i+ di
tr|H2QHP4|H2QHP4_PANTR 239 SMMD-INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDhhdlakknykhwrdswklshveE-WpDNVDFIHKDISGA---- 319
5566.78************************99********99888887777766665554433322.135666666666433.... PP
HHHHHHHHSSEEEEEE---.-......................---S-.HHHHHHHHHHHHHHH CS
FtsJ 78 kikealserkvdlvvsDga.p......................dvsgv.hdldeylqsqLllaa 117
++ ++ +d v D+ p +++ v + ld +++++L+l+
tr|H2QHP4|H2QHP4_PANTR 320 -TED-IKSFTFDAVALDMLnPhvtlpvfyphlkhggvcavyvvNITQViELLDGIRTCELALSC 381
.222.22235899999988445555555555555555555555444443555555555555555 PP
>> tr|K7B228|K7B228_PANTR Protein-L-isoaspartate O-methyltransferase OS=Pan troglodytes OX=9598 GN=PCMT1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.3 0.0 0.0003 0.34 16 57 .. 131 172 .. 123 242 .. 0.66
Alignments for each domain:
== domain 1 score: 11.3 bits; conditional E-value: 0.0003
H--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-- CS
FtsJ 16 fklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm 57
f+ +++g +++D+g++ G + + ++ +g +gkv+++D +
tr|K7B228|K7B228_PANTR 131 FDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKE 172
555679**********************99********8663 PP
>> tr|K7CRE4|K7CRE4_PANTR 3-hydroxybutyrate dehydrogenase 2 OS=Pan troglodytes OX=9598 GN=BDH2 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.4 0.0 0.00014 0.16 42 86 .. 28 80 .. 6 167 .. 0.73
Alignments for each domain:
== domain 1 score: 12.4 bits; conditional E-value: 0.00014
T...-SEEEEEESS--.....---TT-EEEE--TTSSSHHHHHHHHHHH.....S CS
FtsJ 42 rlgakgkvvavDlqpm.....aplpgvttiqgditdpetiekikealse.....r 86
r +++kv+a D+++ ++ pg++t d+t++++i+++ + +++ +
tr|K7CRE4|K7CRE4_PANTR 28 R--EGAKVIATDINESklqelEKYPGIQTRVLDVTKKKQIDQFANEVERldvlfN 80
2..259********99665444449****************99987766443331 PP
>> tr|H2QL94|H2QL94_PANTR TRM2 tRNA methyltransferase 2 homolog A OS=Pan troglodytes OX=9598 GN=TRMT2A PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 8.4 0.1 0.0025 2.8 18 57 .. 429 465 .. 416 492 .. 0.74
2 ? 0.3 0.0 0.71 8.2e+02 23 57 .. 545 576 .. 518 589 .. 0.75
Alignments for each domain:
== domain 1 score: 8.4 bits; conditional E-value: 0.0025
-S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-- CS
FtsJ 18 lfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm 57
++ g tv+D+++++G l++++ ++v++v l p
tr|H2QL94|H2QL94_PANTR 429 QLDAGSTVLDVCCGTGTIGLALARKV---KRVIGVELCPE 465
478899***********999999996...68****99776 PP
== domain 2 score: 0.3 bits; conditional E-value: 0.71
-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-- CS
FtsJ 23 ktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm 57
+++vDl+ aP + + + r k vavDl p
tr|H2QL94|H2QL94_PANTR 545 GNFVDLCRAPSNRVKGIPFR-P--VKAVAVDLFPQ 576
57999999998776666666.2..56677777665 PP
>> tr|H2PZI7|H2PZI7_PANTR PRMT6 isoform 1 OS=Pan troglodytes OX=9598 GN=PRMT6 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.6 0.0 0.0005 0.58 21 58 .. 82 119 .. 67 214 .. 0.83
Alignments for each domain:
== domain 1 score: 10.6 bits; conditional E-value: 0.0005
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..a 58
+gktv+D+ga++G s +++q ga +v+av + +
tr|H2PZI7|H2PZI7_PANTR 82 RGKTVLDVGAGTGILSIFCAQA-GA-RRVYAVEASAIwqQ 119
789*******************.88.9*****99888652 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (177 nodes)
Target sequences: 23008 (11942255 residues searched)
Passed MSV filter: 588 (0.0255563); expected 460.2 (0.02)
Passed bias filter: 524 (0.0227747); expected 460.2 (0.02)
Passed Vit filter: 53 (0.00230355); expected 23.0 (0.001)
Passed Fwd filter: 20 (0.000869263); expected 0.2 (1e-05)
Initial search space (Z): 23008 [actual number of targets]
Domain search space (domZ): 20 [number of targets reported over threshold]
# CPU time: 0.22u 0.01s 00:00:00.23 Elapsed: 00:00:00.09
# Mc/sec: 23486.43
//
[ok]