# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/FtsJ.hmm.txt # target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: FtsJ [M=177] Accession: PF01728.18 Description: FtsJ-like methyltransferase Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.2e-59 201.2 0.0 3.4e-59 200.6 0.0 1.3 1 tr|W4Z6I8|W4Z6I8_STRPU Uncharacterized protein OS=Strongyloc 3.6e-52 177.7 0.0 4.2e-52 177.5 0.0 1.1 1 tr|W4Z872|W4Z872_STRPU Uncharacterized protein OS=Strongyloc 5.5e-36 125.0 0.0 1.1e-35 124.1 0.0 1.4 1 tr|W4ZFB5|W4ZFB5_STRPU Uncharacterized protein OS=Strongyloc 1.5e-33 117.1 0.0 2.4e-33 116.4 0.0 1.3 1 tr|W4YEX4|W4YEX4_STRPU Uncharacterized protein OS=Strongyloc 1.3e-29 104.2 0.0 2.2e-29 103.5 0.0 1.4 1 tr|W4ZGU3|W4ZGU3_STRPU Uncharacterized protein OS=Strongyloc 2e-22 80.8 0.1 4.8e-22 79.6 0.0 1.6 1 tr|W4XQM2|W4XQM2_STRPU Uncharacterized protein OS=Strongyloc 3.7e-12 47.4 0.0 4.4e-12 47.1 0.0 1.1 1 tr|W4ZFB4|W4ZFB4_STRPU Uncharacterized protein OS=Strongyloc 9.1e-05 23.3 0.0 0.73 10.6 0.0 2.4 2 tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongyloc 0.00014 22.7 0.0 0.00018 22.3 0.0 1.1 1 tr|W4Y0L3|W4Y0L3_STRPU Uncharacterized protein OS=Strongyloc 0.0014 19.4 0.0 1.1 10.0 0.0 2.2 2 tr|W4YIM5|W4YIM5_STRPU Uncharacterized protein OS=Strongyloc 0.0054 17.5 0.0 0.012 16.4 0.0 1.5 1 tr|W4XE58|W4XE58_STRPU Uncharacterized protein OS=Strongyloc ------ inclusion threshold ------ 0.016 16.0 0.2 0.076 13.8 0.0 2.1 2 tr|W4XRY6|W4XRY6_STRPU Uncharacterized protein OS=Strongyloc 0.016 16.0 0.1 0.046 14.5 0.0 1.8 1 tr|W4Y3J6|W4Y3J6_STRPU Uncharacterized protein OS=Strongyloc 0.016 16.0 0.0 0.032 15.0 0.0 1.5 1 tr|W4YGN5|W4YGN5_STRPU Uncharacterized protein OS=Strongyloc 0.017 15.9 0.0 0.03 15.1 0.0 1.3 1 tr|W4Y7K6|W4Y7K6_STRPU Uncharacterized protein OS=Strongyloc 0.051 14.3 0.0 0.051 14.3 0.0 1.2 1 tr|W4Z5B8|W4Z5B8_STRPU Uncharacterized protein OS=Strongyloc 0.064 14.0 0.0 0.28 12.0 0.0 1.9 2 tr|W4ZK94|W4ZK94_STRPU Uncharacterized protein OS=Strongyloc 0.079 13.7 0.1 0.19 12.5 0.1 1.6 1 tr|W4YD96|W4YD96_STRPU mRNA cap guanine-N7 methyltransferase 0.098 13.4 0.0 0.2 12.4 0.0 1.6 1 tr|W4ZFV8|W4ZFV8_STRPU Uncharacterized protein OS=Strongyloc 0.12 13.1 0.0 0.17 12.7 0.0 1.3 1 tr|W4ZAS4|W4ZAS4_STRPU Uncharacterized protein OS=Strongyloc 0.12 13.1 0.0 0.18 12.5 0.0 1.3 1 tr|W4Z0W7|W4Z0W7_STRPU Uncharacterized protein OS=Strongyloc 0.13 13.0 0.0 0.78 10.5 0.0 1.8 2 tr|W4YWV3|W4YWV3_STRPU Uncharacterized protein OS=Strongyloc 0.17 12.7 0.1 0.85 10.4 0.1 2.0 1 tr|W4XX51|W4XX51_STRPU Uncharacterized protein OS=Strongyloc 0.24 12.2 0.0 0.45 11.2 0.0 1.6 1 tr|W4YR02|W4YR02_STRPU Uncharacterized protein OS=Strongyloc Domain annotation for each sequence (and alignments): >> tr|W4Z6I8|W4Z6I8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 200.6 0.0 2.9e-62 3.4e-59 22 177 .] 6 167 .. 2 167 .. 0.95 Alignments for each domain: == domain 1 score: 200.6 bits; conditional E-value: 2.9e-62 T-EEEEES-TT-HHHHHHTTT.........-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-------S- CS FtsJ 22 gktvvDlgaaPGgwsqvllqrlga......kgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdvsgv 102 +++vvDl+aaPG+wsqvl+++l + ++k+vavDlq maplpgv ++qgdit+++t+++i +++++k+dlvv+Dgapdv+g tr|W4Z6I8|W4Z6I8_STRPU 6 VTKVVDLCAAPGSWSQVLSRKLRKedgsyeGTKIVAVDLQAMAPLPGVIQLQGDITKESTANEIVSHFEGEKADLVVCDGAPDVTGL 92 678*******************554444445******************************************************** PP HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEEEEE CS FtsJ 103 hdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177 hd+dey+q+qLllaal++++++lkp+gtfv+kifrg++++ l++qlk fF +v+++kP+ssr++s e+f+vc+++ tr|W4Z6I8|W4Z6I8_STRPU 93 HDIDEYIQAQLLLAALNITTHVLKPQGTFVAKIFRGKDVTLLYSQLKIFFPQVTIAKPRSSRNSSIEAFVVCQRY 167 ************************************************************************975 PP >> tr|W4Z872|W4Z872_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 177.5 0.0 3.5e-55 4.2e-52 1 177 [] 49 234 .. 49 234 .. 0.95 Alignments for each domain: == domain 1 score: 177.5 bits; conditional E-value: 3.5e-55 TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...........-SEEEEEESS-----TT-EEE.E--TTSSSHHHH CS FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga........kgkvvavDlqpmaplpgvtti.qgditdpetiek 78 yr+RsayKLleid++++l+kpg+tv+D+gaaPG+w+qv+++r++ +g v+avDl +m+p++g ++ q d+tdp+++e+ tr|W4Z872|W4Z872_STRPU 49 YRARSAYKLLEIDSRYRLLKPGNTVIDCGAAPGSWTQVAVERTNSalqnpakpRGIVIAVDLLHMQPIEGAIMLgQSDFTDPAVQER 135 9*****************************************9444444444469***************99999************ PP HHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE------- CS FtsJ 79 ikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrs 165 i+ +l++r d v+sD+ap+ +g+h+ d+ + + L++ a+ +a+k+l ++g+f++k+++g++t l ++l + F++v++ +P++sr+ tr|W4Z872|W4Z872_STRPU 136 ILGHLDKRLSDAVLSDMAPNATGIHAMDHEQIIALARTAMGFATKVLCENGHFLVKLWDGHDTGLLKRDLVESFRSVKILRPEASRK 222 ***********************************************************9999999999****************** PP ---EEEEEEEEE CS FtsJ 166 esseeflvcrgf 177 esse+fl+++gf tr|W4Z872|W4Z872_STRPU 223 ESSEIFLLAQGF 234 *********997 PP >> tr|W4ZFB5|W4ZFB5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 124.1 0.0 8.9e-39 1.1e-35 47 177 .] 5 135 .. 2 135 .. 0.99 Alignments for each domain: == domain 1 score: 124.1 bits; conditional E-value: 8.9e-39 SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE CS FtsJ 47 gkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvl 133 +++++vDl p++p+p+v ++++dit+ + + ++++ ++ k+d+v++Dgap+v ++ld+++q+qL l al+la++ l++gg f++ tr|W4ZFB5|W4ZFB5_STRPU 5 SMIIGVDLFPIKPIPNVVSFTCDITTTKCRMQLRKEMKTWKADCVLHDGAPNVGTSWVLDAFTQAQLTLHALKLAVEFLNKGGWFIT 91 589************************************************************************************ PP EEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEEEEE CS FtsJ 134 kifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177 k+fr+++ + ll + ++F+kv+v+kP++sr+es+e+f+vc+gf tr|W4ZFB5|W4ZFB5_STRPU 92 KVFRSKDYQPLLWVFHQMFRKVHVTKPQASRNESAEIFVVCQGF 135 ******************************************98 PP >> tr|W4YEX4|W4YEX4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 116.4 0.0 2e-36 2.4e-33 2 177 .] 240 461 .. 239 461 .. 0.87 Alignments for each domain: == domain 1 score: 116.4 bits; conditional E-value: 2e-36 TSHHHHHHHHHHHHH-.-S-.TT-E.............EEEES-TT-HHHHHHTTT..........-SEEEEEES.S--........ CS FtsJ 2 rsRsayKLleidekfk.lfk.pgkt.............vvDlgaaPGgwsqvllqrlga.......kgkvvavDl.qpm........ 57 +R+a+K++++d + +f+ p + + D++a+PGg+s+++++r ++ + k ++++l +++ tr|W4YEX4|W4YEX4_STRPU 240 LNRAAMKMANMDFLCDyMFTsPKHPdrtpvvkdnellyFADVAAGPGGFSEYVVWRRTQsqtrrdfRVKGFGFTLkGSCdfklenff 326 58*********998885565455445668888888999****************998555555545599999999555599999999 PP .......---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEE CS FtsJ 58 .......aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtf 131 +p+ gv+ gd t+ e++ ++++++ e ++v++v++Dg+++v+g+++++e+l+ qLll+++ +a++++++gg+f tr|W4YEX4|W4YEX4_STRPU 327 saspeffEPHYGVNGSdgDGDATNSENQSEFRRFVMEhtdgKGVHFVMADGGFSVEGQENIQEILNKQLLLCQFLVAMSIVREGGHF 413 88877777888999999999*********98866666666699******************************************** PP EEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEEE CS FtsJ 132 vlkifr.geete.allkqlkkfFekvsvvkPkssrsesseeflvcrgf 177 v+k+f+ ++ ++ +l++ l + Fe+vs++kP +sr+++se++++crg+ tr|W4YEX4|W4YEX4_STRPU 414 VCKTFDlFTPFSiGLIYVLYRSFEQVSLFKPVTSRPANSERYVICRGR 461 *******999**9*********************************85 PP >> tr|W4ZGU3|W4ZGU3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 103.5 0.0 1.8e-32 2.2e-29 2 170 .. 87 301 .. 86 302 .. 0.87 Alignments for each domain: == domain 1 score: 103.5 bits; conditional E-value: 1.8e-32 TSHHHHHHHHHHHHH-.-S-.TT-E.............EEEES-TT-HHHHHHTTT..........-SEEEEEES.S--........ CS FtsJ 2 rsRsayKLleidekfk.lfk.pgkt.............vvDlgaaPGgwsqvllqrlga.......kgkvvavDl.qpm........ 57 +R+a+K++++d + +f+ p + + D++a+PGg+s+++++r ++ + k ++++l +++ tr|W4ZGU3|W4ZGU3_STRPU 87 LNRAAMKMANMDFLCDyMFTsPKHPdrtpvvkdnellyFADVAAGPGGFSEYVVWRRTQsqtrrdfRVKGFGFTLkGSCdfklenff 173 58*********998885565455445668888888999****************998555555545599999999555599999999 PP .......---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEE CS FtsJ 58 .......aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtf 131 +p+ gv+ gd t+ e++ ++++++ e ++v++v++Dg+++v+g+++++e+l+ qLll+++ +a++++++gg+f tr|W4ZGU3|W4ZGU3_STRPU 174 saspeffEPHYGVNGSdgDGDATNSENQSEFRRFVMEhtdgKGVHFVMADGGFSVEGQENIQEILNKQLLLCQFLVAMSIVREGGHF 260 88877777888999999999*********98866666666699******************************************** PP EEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EE CS FtsJ 132 vlkifr.geete.allkqlkkfFekvsvvkPkssrsessee 170 v+k+f+ ++ ++ +l++ l + Fe+vs++kP +sr+++se+ tr|W4ZGU3|W4ZGU3_STRPU 261 VCKTFDlFTPFSiGLIYVLYRSFEQVSLFKPVTSRPANSER 301 *******999**9*************************996 PP >> tr|W4XQM2|W4XQM2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 79.6 0.0 4e-25 4.8e-22 4 176 .. 143 353 .. 140 354 .. 0.83 Alignments for each domain: == domain 1 score: 79.6 bits; conditional E-value: 4e-25 HHHHHHHHHHHHH--S-TT-E.......EEEES-TT-HHHHHHTTT..........-SEEEEEESS--......---TT-EEE.... CS FtsJ 4 RsayKLleidekfklfkpgkt.......vvDlgaaPGgwsqvllqrlga.......kgkvvavDlqpm......aplpgvtti.... 66 +++ K ei++ +l+ + + ++++ aPG+++ l++ +++ ++k+++ l+p + +t++ tr|W4XQM2|W4XQM2_STRPU 143 QAWSKFHEILATRHLIP-DSAlnsgtlhSLHICEAPGAFISSLNHYIKThkdkeiiQWKWLGTSLNPHcetntaD----CTIVddrl 224 78999999999999774.3222355566******************95555554555********9998755541....44445555 PP ..............E--TTSSSHHHHHHHHHHH...SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE CS FtsJ 67 ..............qgditdpetiekikealse...rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkif 136 +gd+++ ++ +++++++ v+lv++Dg+ +++ + +e + L+ ++ +alkll+p+g f++k+f tr|W4XQM2|W4XQM2_STRPU 225 ilqtpdcwyfgddnTGDVMSAANLAGLERLIQQemnGTVHLVTADGSVNCQDDPEHQEHRVFPLVFCQSLTALKLLAPEGAFLVKMF 311 55666777889************997776666655568************************************************* PP -..STTHHHHHHHHGGGEEEEEEE----------EEEEEEEE CS FtsJ 137 r..geeteallkqlkkfFekvsvvkPkssrsesseeflvcrg 176 + +++t+ l++ l+ F++v+v kP+ s+ ++se++++c+ tr|W4XQM2|W4XQM2_STRPU 312 TmyNANTACLMNLLNIAFKEVTVLKPACSKAGNSEVYVMCKS 353 *877777788888***************************96 PP >> tr|W4ZFB4|W4ZFB4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 47.1 0.0 3.7e-15 4.4e-12 1 35 [. 24 58 .] 24 58 .] 0.99 Alignments for each domain: == domain 1 score: 47.1 bits; conditional E-value: 3.7e-15 TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HH CS FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgw 35 yrsRsa+KL++++ kf+++++ + ++Dl+aaPGgw tr|W4ZFB4|W4ZFB4_STRPU 24 YRSRSAFKLIQLNRKFSFLQESRVCIDLCAAPGGW 58 9****************99**************** PP >> tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 10.2 0.0 0.0008 0.96 21 58 .. 107 151 .. 66 204 .. 0.82 2 ! 10.6 0.0 0.00061 0.73 22 58 .. 272 313 .. 256 364 .. 0.79 Alignments for each domain: == domain 1 score: 10.2 bits; conditional E-value: 0.0008 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--.......- CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm.......a 58 g +++D+g++ G +q+l++++ + ++ v+vD+ q+m a tr|W4Y7A2|W4Y7A2_STRPU 107 MGIRMLDVGCGAGLATQILAKKFPE-SHFVGVDIaQSMvdeanaeA 151 45679*****************975.9*******888876655432 PP == domain 2 score: 10.6 bits; conditional E-value: 0.00061 T-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--.....- CS FtsJ 22 gktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm.....a 58 g +v+D+g++ G +q+l++++ + ++ v+vD+ q++ a tr|W4Y7A2|W4Y7A2_STRPU 272 GIRVLDVGCGAGLATQILAKKFPE-SHFVGVDIaQSIvdeanA 313 557******************975.9*******5555665441 PP >> tr|W4Y0L3|W4Y0L3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.3 0.0 1.5e-07 0.00018 37 74 .. 40 77 .. 37 82 .. 0.92 Alignments for each domain: == domain 1 score: 22.3 bits; conditional E-value: 1.5e-07 HHHTTT...-SEEEEEESS-----TT-EEEE--TTSSS CS FtsJ 37 qvllqrlgakgkvvavDlqpmaplpgvttiqgditdpe 74 qv+++++ ++++++vDl p++p+p+v ++++dit+ + tr|W4Y0L3|W4Y0L3_STRPU 40 QVASRNMPISSMIIGVDLFPIKPIPNVVSFTCDITTTK 77 9*****9779************************9876 PP >> tr|W4YIM5|W4YIM5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 10.0 0.0 0.00095 1.1 20 58 .. 142 189 .. 113 256 .. 0.74 2 ! 7.3 0.0 0.0062 7.3 45 109 .. 307 381 .. 286 388 .. 0.74 Alignments for each domain: == domain 1 score: 10.0 bits; conditional E-value: 0.00095 -TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..........- CS FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..........a 58 +gk v+D+g+++G s ++++ ga ++v ++ +m + tr|W4YIM5|W4YIM5_STRPU 142 MKGKVVLDVGCGTGILSMMCVKYGGA-KRVHSIEASEMaetaeklinhN 189 26788******************776.***********54443222221 PP == domain 2 score: 7.3 bits; conditional E-value: 0.0062 .-SEEEEEESS-----TT-EEEE--T.TSSSHHHHHH..........HHHHHSSEEEEEE-------S-HHHHHHH CS FtsJ 45 akgkvvavDlqpmaplpgvttiqgdi.tdpetiekik..........ealserkvdlvvsDgapdvsgvhdldeyl 109 ++ +v+++Dl+ + l+ +++i+ d+ ++ +++ ++ eal+++++++vv D +p v ++h ++++l tr|W4YIM5|W4YIM5_STRPU 307 KGEVVYSCDLNTV-TLKDLEMIKQDFsFTISKQGTLHgfaswfsvefEALHKSRAECVVLDTSPHVPLTHWKQAAL 381 25899*****997.57889999999966666666555444444444556666****************99998876 PP >> tr|W4XE58|W4XE58_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.4 0.0 1e-05 0.012 21 100 .. 67 158 .. 59 203 .. 0.73 Alignments for each domain: == domain 1 score: 16.4 bits; conditional E-value: 1e-05 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.................---TT-EEEE--TTSSSHHHHHHHHHHHSSEEE CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.................aplpgvttiqgditdpetiekikealserkvdl 90 ++ +vvDlg+++G + +++ +g+kg vv+vD+ p p+v++ +g i + + ++++++ d+ tr|W4XE58|W4XE58_STRPU 67 EDARVVDLGSGTGRDCYAISKLVGPKGFVVGVDMTDEqlelarkyvthhqekfgYPAPNVEFRKGYIENLKD-----AHVEDNQYDI 148 5678******************************77746544444433333322233444444444433333.....4455588999 PP EEE------- CS FtsJ 91 vvsDgapdvs 100 vvs + + s tr|W4XE58|W4XE58_STRPU 149 VVSNCVINLS 158 9998886654 PP >> tr|W4XRY6|W4XRY6_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.8 0.0 6.4e-05 0.076 20 76 .. 248 315 .. 235 402 .. 0.73 2 ? -1.2 0.1 2.6 3.1e+03 63 102 .. 502 549 .. 455 562 .. 0.67 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 6.4e-05 -TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--...........---TT-EEEE--TTSSSHH CS FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm...........aplpgvttiqgditdpeti 76 kpg +v+D ++aPG+ + ++ l +++k++++Dl p a ++ +ti+ d+++ + tr|W4XRY6|W4XRY6_STRPU 248 KPGSHVIDACSAPGNKTSHMASLLRNDAKIYSYDLDPKrisvmntllerAGVSAAKTIHQDFLTTDPC 315 59999******************9989********998777776554433335666667777444333 PP == domain 2 score: -1.2 bits; conditional E-value: 2.6 -EEEE--TTSSSHHHHHHHHHHH.......SSEEEEEE-.------S- CS FtsJ 63 vttiqgditdpetiekikealse.......rkvdlvvsD.gapdvsgv 102 + +++d+++ ++++k ++ ++ vd+ sD ++ dv+ + tr|W4XRY6|W4XRY6_STRPU 502 EEALKADVMEDDQKDKNERKKKKkrrkeneMNVDVCASDeISDDVKQI 549 455577777777777555333224444444778888888444555554 PP >> tr|W4Y3J6|W4Y3J6_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.5 0.0 3.8e-05 0.046 20 132 .. 703 833 .. 692 854 .. 0.65 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 3.8e-05 -TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEE.....E--TTSSSHHHHHHHHHHH.......SSEEEEEE- CS FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvtti.....qgditdpetiekikealse.......rkvdlvvsD 94 ++g++++D +a+PG+ + +++ ++++g+++a D ++ +v+ + ++ it+ ++ + ++d v+ D tr|W4Y3J6|W4Y3J6_STRPU 703 HEGEKILDMCASPGSKTTYIAALMKNTGMLFANDANKK----RVSALvgnlhRCGITNTVICNED-----GksfpkvmGGFDRVLLD 780 47899*******************999*******9986....33333111123333333333322.....12222244346666666 PP ------S-HHHHHHHH...............HHHHHHHHHHHHHHEEEEEEEE CS FtsJ 95 gapdvsgvhdldeylq...............sqLllaalelalkllkpggtfv 132 + +gv ++d++++ +L+laa+ + k+gg +v tr|W4Y3J6|W4Y3J6_STRPU 781 APCSGTGVIAKDTAVKlskdegdiqrcshlqKELILAAIDSIDANSKTGGYLV 833 66555666555555555555555555555545777777777777777777766 PP >> tr|W4YGN5|W4YGN5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 15.0 0.0 2.7e-05 0.032 21 58 .. 42 80 .. 24 169 .. 0.69 Alignments for each domain: == domain 1 score: 15.0 bits; conditional E-value: 2.7e-05 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.....- CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.....a 58 pg vvD+g++ G+++q l++++ + +++D+ + + tr|W4YGN5|W4YGN5_STRPU 42 PG-LVVDVGCGSGQFTQSLARHF---DRALGFDISEAqieeaK 80 32.4******************7...57999999887554432 PP >> tr|W4Y7K6|W4Y7K6_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 15.1 0.0 2.5e-05 0.03 14 61 .. 264 309 .. 253 329 .. 0.78 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 2.5e-05 HHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..---T CS FtsJ 14 ekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..aplp 61 +++ +f ++k v+D+g+++G s ++++ ga kv+avD+ + + ++ tr|W4Y7K6|W4Y7K6_STRPU 264 NQY-IF-KDKVVLDVGCGTGILSMFAAKA-GA-RKVIAVDQSDIvyQAMD 309 444.46.7889******************.88.9******9988764443 PP >> tr|W4Z5B8|W4Z5B8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.3 0.0 4.3e-05 0.051 21 76 .. 67 125 .. 16 150 .] 0.72 Alignments for each domain: == domain 1 score: 14.3 bits; conditional E-value: 4.3e-05 TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.....---TT-EEEE--TTSSSHH CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.....aplpgvttiqgditdpeti 76 ++ +vvDlg+++G + +++ +g+kg vv++D+ + + vt +q + p+ tr|W4Z5B8|W4Z5B8_STRPU 67 EDARVVDLGSGTGRDCYAISKLVGPKGFVVGIDMTDEqlelaR--KYVTHHQEKFGYPAPN 125 4578******************************776454440..4444444433333333 PP >> tr|W4ZK94|W4ZK94_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.0 0.0 0.00023 0.28 15 54 .. 42 72 .. 28 98 .. 0.65 2 ? -1.1 0.0 2.4 2.9e+03 122 133 .. 105 116 .. 83 141 .. 0.78 Alignments for each domain: == domain 1 score: 12.0 bits; conditional E-value: 0.00023 HH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES CS FtsJ 15 kfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDl 54 + vvD+g++ G+++q l++++ + +++ tr|W4ZK94|W4ZK94_STRPU 42 HE------SLVVDIGCGSGQFTQSLARHFD---RAIGISS 72 33......349**************99982...3333333 PP == domain 2 score: -1.1 bits; conditional E-value: 2.4 HHHEEEEEEEEE CS FtsJ 122 lkllkpggtfvl 133 ++l+pgg++v+ tr|W4ZK94|W4ZK94_STRPU 105 DRVLRPGGHVVI 116 479999999985 PP >> tr|W4YD96|W4YD96_STRPU mRNA cap guanine-N7 methyltransferase OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.5 0.1 0.00016 0.19 20 134 .. 102 226 .. 85 246 .. 0.58 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.00016 -TT-EEEEES-TT-H....HHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-------S- CS FtsJ 20 kpgktvvDlgaaPGg....wsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdvsgv 102 k+g tv+Dl+++ Gg w++ ++l + + av +q+++++ + +++ + ++ +++ + ++++ +D a+ tr|W4YD96|W4YD96_STRPU 102 KKGCTVLDLCCGKGGdllkWTKGHIKKLVC-ADIAAVSVQQCQKRYN-DMVERNRRSGNQKT-F-------AAEFISADCAEVLLTE 178 48899*********8777799999999866.8999999999955522.12223322222222.1.......2444444544333332 PP HHHHHHHHHHHHHHHHHHHHH................HEEEEEEEEEE CS FtsJ 103 hdldeylqsqLllaalelalk................llkpggtfvlk 134 + +++ + +L+ +++++ + l+pgg fv tr|W4YD96|W4YD96_STRPU 179 RYQEKDMLFDLCSCQFSFHYSfeaaarartmlrnaceRLRPGGYFVGT 226 333333333444444444333333333333333333388888888855 PP >> tr|W4ZFV8|W4ZFV8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.4 0.0 0.00017 0.2 12 70 .. 198 263 .. 195 383 .. 0.79 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.00017 HHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--..........---TT-EEEE--T CS FtsJ 12 idekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm..........aplpgvttiqgdi 70 i e++k g +++Dlg++ G+ s v ++ ++ vv++D q+ + l +v++++ d tr|W4ZFV8|W4ZFV8_STRPU 198 IEEQMK---SGIRILDLGCGRGSASLVFAESYP-NSTVVGLDFsQEAinygkerakeKGLTNVEFVCEDA 263 555555...7889******************76.599******555578887665433336777776665 PP >> tr|W4ZAS4|W4ZAS4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.7 0.0 0.00014 0.17 15 97 .. 143 228 .. 129 299 .. 0.83 Alignments for each domain: == domain 1 score: 12.7 bits; conditional E-value: 0.00014 HH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEE CS FtsJ 15 kfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikealserkvdlvv 92 + + +kpg +v+ lgaa G ++ +g++g v+av + +++ ++ i d ++p + +++ vd+v tr|W4ZAS4|W4ZAS4_STRPU 143 HIH-MKPGSKVLYLGAASGTTVSHVSDLVGPEGLVYAVEFSHRsgrdlmnvaKKRTNIIPIIEDARHPHKYRMLVG-----MVDCVF 223 455.689*********************************998788665554444666666999999999998885.....59**** PP E---- CS FtsJ 93 sDgap 97 +D+a tr|W4ZAS4|W4ZAS4_STRPU 224 ADVAQ 228 **994 PP >> tr|W4Z0W7|W4Z0W7_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.5 0.0 0.00015 0.18 19 93 .. 124 201 .. 93 260 .. 0.72 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.00015 S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--.......---TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE CS FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm.......aplpgvttiqgditdpetiekikealserkvdlvvs 93 ++ + v+Dlg++ G + ++qr+ ++ +++D+ q+ a ++++ ++ ++ ++++ + +++ + ++lv++ tr|W4Z0W7|W4Z0W7_STRPU 124 LETNVSVLDLGCGQGHATMLMAQRFP-GCTFYGLDIsQKAiaearaeA--ARLSLTNCKFMVQDVATLPHTWT--NTFQLVTC 201 455667******************96.6********555487655331..44444444444444444444433..23555555 PP >> tr|W4YWV3|W4YWV3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.5 0.0 0.00066 0.78 72 160 .. 17 101 .. 3 103 .. 0.85 2 ? 5.8 0.0 0.018 22 2 43 .. 75 119 .. 74 126 .] 0.77 Alignments for each domain: == domain 1 score: 10.5 bits; conditional E-value: 0.00066 SSSHHHHHHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE CS FtsJ 72 dpetiekikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvv 158 ++e+ +++++++++r+ ++ v D+ v + d++++ L+l+ + +k +++g fv+ + + +++l+++ ++F+++ ++ tr|W4YWV3|W4YWV3_STRPU 17 MQEVFPELRRYCQQRQLEFEVVDMRWGVRDSATADHLTSF-LCLNEIDR-CKRMSQGPYFVVRVGM--KLKSMLNHTHEYFSEMGIR 99 44555567777778****************9*****9997.*****999.789999*****99966..8999**********99998 PP -- CS FtsJ 159 kP 160 P tr|W4YWV3|W4YWV3_STRPU 100 GP 101 77 PP == domain 2 score: 5.8 bits; conditional E-value: 0.018 TSHHHHHHHHHHHHH-.-S-..TT-EEEEES-TT-HHHHHHTTT. CS FtsJ 2 rsRsayKLleidekfk.lfk..pgktvvDlgaaPGgwsqvllqrl 43 + R ++KL ++++ + f+ + ++++ G++s v +++ tr|W4YWV3|W4YWV3_STRPU 75 VVRVGMKLKSMLNHTHeYFSemGIRGPLHVCVELGSFSHVHCKKN 119 568889999988777646654455679*************99984 PP >> tr|W4XX51|W4XX51_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.4 0.1 0.00071 0.85 21 44 .. 282 315 .. 258 449 .. 0.75 Alignments for each domain: == domain 1 score: 10.4 bits; conditional E-value: 0.00071 TT-EEEEES-TT-HHHHHHTTT............ CS FtsJ 21 pgktvvDlgaaPGgwsqvllqrl..........g 44 ++ v+Dl+a+PGg s +lq + tr|W4XX51|W4XX51_STRPU 282 TDDVVLDLCAGPGGKSVAILQTMlistltanekV 315 4467***************999977666544330 PP >> tr|W4YR02|W4YR02_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.2 0.0 0.00038 0.45 19 45 .. 227 253 .. 186 265 .. 0.87 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.00038 S-TT-EEEEES-TT-HHHHHHTTT... CS FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlga 45 +kp ++v+D +aaPG+ + l + l+a tr|W4YR02|W4YR02_STRPU 227 VKPHHKVLDMCAAPGSKTAQLIEMLHA 253 468899**********99888888765 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (177 nodes) Target sequences: 28594 (14266044 residues searched) Passed MSV filter: 736 (0.0257397); expected 571.9 (0.02) Passed bias filter: 632 (0.0221025); expected 571.9 (0.02) Passed Vit filter: 76 (0.0026579); expected 28.6 (0.001) Passed Fwd filter: 24 (0.000839337); expected 0.3 (1e-05) Initial search space (Z): 28594 [actual number of targets] Domain search space (domZ): 24 [number of targets reported over threshold] # CPU time: 0.25u 0.01s 00:00:00.26 Elapsed: 00:00:00.10 # Mc/sec: 25250.90 // [ok]