# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/FtsJ.hmm.txt
# target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: FtsJ [M=177]
Accession: PF01728.18
Description: FtsJ-like methyltransferase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2.2e-59 201.2 0.0 3.4e-59 200.6 0.0 1.3 1 tr|W4Z6I8|W4Z6I8_STRPU Uncharacterized protein OS=Strongyloc
3.6e-52 177.7 0.0 4.2e-52 177.5 0.0 1.1 1 tr|W4Z872|W4Z872_STRPU Uncharacterized protein OS=Strongyloc
5.5e-36 125.0 0.0 1.1e-35 124.1 0.0 1.4 1 tr|W4ZFB5|W4ZFB5_STRPU Uncharacterized protein OS=Strongyloc
1.5e-33 117.1 0.0 2.4e-33 116.4 0.0 1.3 1 tr|W4YEX4|W4YEX4_STRPU Uncharacterized protein OS=Strongyloc
1.3e-29 104.2 0.0 2.2e-29 103.5 0.0 1.4 1 tr|W4ZGU3|W4ZGU3_STRPU Uncharacterized protein OS=Strongyloc
2e-22 80.8 0.1 4.8e-22 79.6 0.0 1.6 1 tr|W4XQM2|W4XQM2_STRPU Uncharacterized protein OS=Strongyloc
3.7e-12 47.4 0.0 4.4e-12 47.1 0.0 1.1 1 tr|W4ZFB4|W4ZFB4_STRPU Uncharacterized protein OS=Strongyloc
9.1e-05 23.3 0.0 0.73 10.6 0.0 2.4 2 tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongyloc
0.00014 22.7 0.0 0.00018 22.3 0.0 1.1 1 tr|W4Y0L3|W4Y0L3_STRPU Uncharacterized protein OS=Strongyloc
0.0014 19.4 0.0 1.1 10.0 0.0 2.2 2 tr|W4YIM5|W4YIM5_STRPU Uncharacterized protein OS=Strongyloc
0.0054 17.5 0.0 0.012 16.4 0.0 1.5 1 tr|W4XE58|W4XE58_STRPU Uncharacterized protein OS=Strongyloc
------ inclusion threshold ------
0.016 16.0 0.2 0.076 13.8 0.0 2.1 2 tr|W4XRY6|W4XRY6_STRPU Uncharacterized protein OS=Strongyloc
0.016 16.0 0.1 0.046 14.5 0.0 1.8 1 tr|W4Y3J6|W4Y3J6_STRPU Uncharacterized protein OS=Strongyloc
0.016 16.0 0.0 0.032 15.0 0.0 1.5 1 tr|W4YGN5|W4YGN5_STRPU Uncharacterized protein OS=Strongyloc
0.017 15.9 0.0 0.03 15.1 0.0 1.3 1 tr|W4Y7K6|W4Y7K6_STRPU Uncharacterized protein OS=Strongyloc
0.051 14.3 0.0 0.051 14.3 0.0 1.2 1 tr|W4Z5B8|W4Z5B8_STRPU Uncharacterized protein OS=Strongyloc
0.064 14.0 0.0 0.28 12.0 0.0 1.9 2 tr|W4ZK94|W4ZK94_STRPU Uncharacterized protein OS=Strongyloc
0.079 13.7 0.1 0.19 12.5 0.1 1.6 1 tr|W4YD96|W4YD96_STRPU mRNA cap guanine-N7 methyltransferase
0.098 13.4 0.0 0.2 12.4 0.0 1.6 1 tr|W4ZFV8|W4ZFV8_STRPU Uncharacterized protein OS=Strongyloc
0.12 13.1 0.0 0.17 12.7 0.0 1.3 1 tr|W4ZAS4|W4ZAS4_STRPU Uncharacterized protein OS=Strongyloc
0.12 13.1 0.0 0.18 12.5 0.0 1.3 1 tr|W4Z0W7|W4Z0W7_STRPU Uncharacterized protein OS=Strongyloc
0.13 13.0 0.0 0.78 10.5 0.0 1.8 2 tr|W4YWV3|W4YWV3_STRPU Uncharacterized protein OS=Strongyloc
0.17 12.7 0.1 0.85 10.4 0.1 2.0 1 tr|W4XX51|W4XX51_STRPU Uncharacterized protein OS=Strongyloc
0.24 12.2 0.0 0.45 11.2 0.0 1.6 1 tr|W4YR02|W4YR02_STRPU Uncharacterized protein OS=Strongyloc
Domain annotation for each sequence (and alignments):
>> tr|W4Z6I8|W4Z6I8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 200.6 0.0 2.9e-62 3.4e-59 22 177 .] 6 167 .. 2 167 .. 0.95
Alignments for each domain:
== domain 1 score: 200.6 bits; conditional E-value: 2.9e-62
T-EEEEES-TT-HHHHHHTTT.........-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-------S- CS
FtsJ 22 gktvvDlgaaPGgwsqvllqrlga......kgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdvsgv 102
+++vvDl+aaPG+wsqvl+++l + ++k+vavDlq maplpgv ++qgdit+++t+++i +++++k+dlvv+Dgapdv+g
tr|W4Z6I8|W4Z6I8_STRPU 6 VTKVVDLCAAPGSWSQVLSRKLRKedgsyeGTKIVAVDLQAMAPLPGVIQLQGDITKESTANEIVSHFEGEKADLVVCDGAPDVTGL 92
678*******************554444445******************************************************** PP
HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEEEEE CS
FtsJ 103 hdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
hd+dey+q+qLllaal++++++lkp+gtfv+kifrg++++ l++qlk fF +v+++kP+ssr++s e+f+vc+++
tr|W4Z6I8|W4Z6I8_STRPU 93 HDIDEYIQAQLLLAALNITTHVLKPQGTFVAKIFRGKDVTLLYSQLKIFFPQVTIAKPRSSRNSSIEAFVVCQRY 167
************************************************************************975 PP
>> tr|W4Z872|W4Z872_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 177.5 0.0 3.5e-55 4.2e-52 1 177 [] 49 234 .. 49 234 .. 0.95
Alignments for each domain:
== domain 1 score: 177.5 bits; conditional E-value: 3.5e-55
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HHHHHHTTT...........-SEEEEEESS-----TT-EEE.E--TTSSSHHHH CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgwsqvllqrlga........kgkvvavDlqpmaplpgvtti.qgditdpetiek 78
yr+RsayKLleid++++l+kpg+tv+D+gaaPG+w+qv+++r++ +g v+avDl +m+p++g ++ q d+tdp+++e+
tr|W4Z872|W4Z872_STRPU 49 YRARSAYKLLEIDSRYRLLKPGNTVIDCGAAPGSWTQVAVERTNSalqnpakpRGIVIAVDLLHMQPIEGAIMLgQSDFTDPAVQER 135
9*****************************************9444444444469***************99999************ PP
HHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE------- CS
FtsJ 79 ikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvvkPkssrs 165
i+ +l++r d v+sD+ap+ +g+h+ d+ + + L++ a+ +a+k+l ++g+f++k+++g++t l ++l + F++v++ +P++sr+
tr|W4Z872|W4Z872_STRPU 136 ILGHLDKRLSDAVLSDMAPNATGIHAMDHEQIIALARTAMGFATKVLCENGHFLVKLWDGHDTGLLKRDLVESFRSVKILRPEASRK 222
***********************************************************9999999999****************** PP
---EEEEEEEEE CS
FtsJ 166 esseeflvcrgf 177
esse+fl+++gf
tr|W4Z872|W4Z872_STRPU 223 ESSEIFLLAQGF 234
*********997 PP
>> tr|W4ZFB5|W4ZFB5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 124.1 0.0 8.9e-39 1.1e-35 47 177 .] 5 135 .. 2 135 .. 0.99
Alignments for each domain:
== domain 1 score: 124.1 bits; conditional E-value: 8.9e-39
SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEE CS
FtsJ 47 gkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvl 133
+++++vDl p++p+p+v ++++dit+ + + ++++ ++ k+d+v++Dgap+v ++ld+++q+qL l al+la++ l++gg f++
tr|W4ZFB5|W4ZFB5_STRPU 5 SMIIGVDLFPIKPIPNVVSFTCDITTTKCRMQLRKEMKTWKADCVLHDGAPNVGTSWVLDAFTQAQLTLHALKLAVEFLNKGGWFIT 91
589************************************************************************************ PP
EEE-STTHHHHHHHHGGGEEEEEEE----------EEEEEEEEE CS
FtsJ 134 kifrgeeteallkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
k+fr+++ + ll + ++F+kv+v+kP++sr+es+e+f+vc+gf
tr|W4ZFB5|W4ZFB5_STRPU 92 KVFRSKDYQPLLWVFHQMFRKVHVTKPQASRNESAEIFVVCQGF 135
******************************************98 PP
>> tr|W4YEX4|W4YEX4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 116.4 0.0 2e-36 2.4e-33 2 177 .] 240 461 .. 239 461 .. 0.87
Alignments for each domain:
== domain 1 score: 116.4 bits; conditional E-value: 2e-36
TSHHHHHHHHHHHHH-.-S-.TT-E.............EEEES-TT-HHHHHHTTT..........-SEEEEEES.S--........ CS
FtsJ 2 rsRsayKLleidekfk.lfk.pgkt.............vvDlgaaPGgwsqvllqrlga.......kgkvvavDl.qpm........ 57
+R+a+K++++d + +f+ p + + D++a+PGg+s+++++r ++ + k ++++l +++
tr|W4YEX4|W4YEX4_STRPU 240 LNRAAMKMANMDFLCDyMFTsPKHPdrtpvvkdnellyFADVAAGPGGFSEYVVWRRTQsqtrrdfRVKGFGFTLkGSCdfklenff 326
58*********998885565455445668888888999****************998555555545599999999555599999999 PP
.......---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEE CS
FtsJ 58 .......aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtf 131
+p+ gv+ gd t+ e++ ++++++ e ++v++v++Dg+++v+g+++++e+l+ qLll+++ +a++++++gg+f
tr|W4YEX4|W4YEX4_STRPU 327 saspeffEPHYGVNGSdgDGDATNSENQSEFRRFVMEhtdgKGVHFVMADGGFSVEGQENIQEILNKQLLLCQFLVAMSIVREGGHF 413
88877777888999999999*********98866666666699******************************************** PP
EEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EEEEEEEEE CS
FtsJ 132 vlkifr.geete.allkqlkkfFekvsvvkPkssrsesseeflvcrgf 177
v+k+f+ ++ ++ +l++ l + Fe+vs++kP +sr+++se++++crg+
tr|W4YEX4|W4YEX4_STRPU 414 VCKTFDlFTPFSiGLIYVLYRSFEQVSLFKPVTSRPANSERYVICRGR 461
*******999**9*********************************85 PP
>> tr|W4ZGU3|W4ZGU3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 103.5 0.0 1.8e-32 2.2e-29 2 170 .. 87 301 .. 86 302 .. 0.87
Alignments for each domain:
== domain 1 score: 103.5 bits; conditional E-value: 1.8e-32
TSHHHHHHHHHHHHH-.-S-.TT-E.............EEEES-TT-HHHHHHTTT..........-SEEEEEES.S--........ CS
FtsJ 2 rsRsayKLleidekfk.lfk.pgkt.............vvDlgaaPGgwsqvllqrlga.......kgkvvavDl.qpm........ 57
+R+a+K++++d + +f+ p + + D++a+PGg+s+++++r ++ + k ++++l +++
tr|W4ZGU3|W4ZGU3_STRPU 87 LNRAAMKMANMDFLCDyMFTsPKHPdrtpvvkdnellyFADVAAGPGGFSEYVVWRRTQsqtrrdfRVKGFGFTLkGSCdfklenff 173
58*********998885565455445668888888999****************998555555545599999999555599999999 PP
.......---TT-EEE..E--TTSSSHHHHHHHHHHH....SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEE CS
FtsJ 58 .......aplpgvtti..qgditdpetiekikealse....rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtf 131
+p+ gv+ gd t+ e++ ++++++ e ++v++v++Dg+++v+g+++++e+l+ qLll+++ +a++++++gg+f
tr|W4ZGU3|W4ZGU3_STRPU 174 saspeffEPHYGVNGSdgDGDATNSENQSEFRRFVMEhtdgKGVHFVMADGGFSVEGQENIQEILNKQLLLCQFLVAMSIVREGGHF 260
88877777888999999999*********98866666666699******************************************** PP
EEEEE-.STTHH.HHHHHHGGGEEEEEEE----------EE CS
FtsJ 132 vlkifr.geete.allkqlkkfFekvsvvkPkssrsessee 170
v+k+f+ ++ ++ +l++ l + Fe+vs++kP +sr+++se+
tr|W4ZGU3|W4ZGU3_STRPU 261 VCKTFDlFTPFSiGLIYVLYRSFEQVSLFKPVTSRPANSER 301
*******999**9*************************996 PP
>> tr|W4XQM2|W4XQM2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 79.6 0.0 4e-25 4.8e-22 4 176 .. 143 353 .. 140 354 .. 0.83
Alignments for each domain:
== domain 1 score: 79.6 bits; conditional E-value: 4e-25
HHHHHHHHHHHHH--S-TT-E.......EEEES-TT-HHHHHHTTT..........-SEEEEEESS--......---TT-EEE.... CS
FtsJ 4 RsayKLleidekfklfkpgkt.......vvDlgaaPGgwsqvllqrlga.......kgkvvavDlqpm......aplpgvtti.... 66
+++ K ei++ +l+ + + ++++ aPG+++ l++ +++ ++k+++ l+p + +t++
tr|W4XQM2|W4XQM2_STRPU 143 QAWSKFHEILATRHLIP-DSAlnsgtlhSLHICEAPGAFISSLNHYIKThkdkeiiQWKWLGTSLNPHcetntaD----CTIVddrl 224
78999999999999774.3222355566******************95555554555********9998755541....44445555 PP
..............E--TTSSSHHHHHHHHHHH...SSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE CS
FtsJ 67 ..............qgditdpetiekikealse...rkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkif 136
+gd+++ ++ +++++++ v+lv++Dg+ +++ + +e + L+ ++ +alkll+p+g f++k+f
tr|W4XQM2|W4XQM2_STRPU 225 ilqtpdcwyfgddnTGDVMSAANLAGLERLIQQemnGTVHLVTADGSVNCQDDPEHQEHRVFPLVFCQSLTALKLLAPEGAFLVKMF 311
55666777889************997776666655568************************************************* PP
-..STTHHHHHHHHGGGEEEEEEE----------EEEEEEEE CS
FtsJ 137 r..geeteallkqlkkfFekvsvvkPkssrsesseeflvcrg 176
+ +++t+ l++ l+ F++v+v kP+ s+ ++se++++c+
tr|W4XQM2|W4XQM2_STRPU 312 TmyNANTACLMNLLNIAFKEVTVLKPACSKAGNSEVYVMCKS 353
*877777788888***************************96 PP
>> tr|W4ZFB4|W4ZFB4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 47.1 0.0 3.7e-15 4.4e-12 1 35 [. 24 58 .] 24 58 .] 0.99
Alignments for each domain:
== domain 1 score: 47.1 bits; conditional E-value: 3.7e-15
TTSHHHHHHHHHHHHH--S-TT-EEEEES-TT-HH CS
FtsJ 1 yrsRsayKLleidekfklfkpgktvvDlgaaPGgw 35
yrsRsa+KL++++ kf+++++ + ++Dl+aaPGgw
tr|W4ZFB4|W4ZFB4_STRPU 24 YRSRSAFKLIQLNRKFSFLQESRVCIDLCAAPGGW 58
9****************99**************** PP
>> tr|W4Y7A2|W4Y7A2_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 10.2 0.0 0.0008 0.96 21 58 .. 107 151 .. 66 204 .. 0.82
2 ! 10.6 0.0 0.00061 0.73 22 58 .. 272 313 .. 256 364 .. 0.79
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 0.0008
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--.......- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm.......a 58
g +++D+g++ G +q+l++++ + ++ v+vD+ q+m a
tr|W4Y7A2|W4Y7A2_STRPU 107 MGIRMLDVGCGAGLATQILAKKFPE-SHFVGVDIaQSMvdeanaeA 151
45679*****************975.9*******888876655432 PP
== domain 2 score: 10.6 bits; conditional E-value: 0.00061
T-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--.....- CS
FtsJ 22 gktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm.....a 58
g +v+D+g++ G +q+l++++ + ++ v+vD+ q++ a
tr|W4Y7A2|W4Y7A2_STRPU 272 GIRVLDVGCGAGLATQILAKKFPE-SHFVGVDIaQSIvdeanA 313
557******************975.9*******5555665441 PP
>> tr|W4Y0L3|W4Y0L3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 22.3 0.0 1.5e-07 0.00018 37 74 .. 40 77 .. 37 82 .. 0.92
Alignments for each domain:
== domain 1 score: 22.3 bits; conditional E-value: 1.5e-07
HHHTTT...-SEEEEEESS-----TT-EEEE--TTSSS CS
FtsJ 37 qvllqrlgakgkvvavDlqpmaplpgvttiqgditdpe 74
qv+++++ ++++++vDl p++p+p+v ++++dit+ +
tr|W4Y0L3|W4Y0L3_STRPU 40 QVASRNMPISSMIIGVDLFPIKPIPNVVSFTCDITTTK 77
9*****9779************************9876 PP
>> tr|W4YIM5|W4YIM5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 10.0 0.0 0.00095 1.1 20 58 .. 142 189 .. 113 256 .. 0.74
2 ! 7.3 0.0 0.0062 7.3 45 109 .. 307 381 .. 286 388 .. 0.74
Alignments for each domain:
== domain 1 score: 10.0 bits; conditional E-value: 0.00095
-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..........- CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..........a 58
+gk v+D+g+++G s ++++ ga ++v ++ +m +
tr|W4YIM5|W4YIM5_STRPU 142 MKGKVVLDVGCGTGILSMMCVKYGGA-KRVHSIEASEMaetaeklinhN 189
26788******************776.***********54443222221 PP
== domain 2 score: 7.3 bits; conditional E-value: 0.0062
.-SEEEEEESS-----TT-EEEE--T.TSSSHHHHHH..........HHHHHSSEEEEEE-------S-HHHHHHH CS
FtsJ 45 akgkvvavDlqpmaplpgvttiqgdi.tdpetiekik..........ealserkvdlvvsDgapdvsgvhdldeyl 109
++ +v+++Dl+ + l+ +++i+ d+ ++ +++ ++ eal+++++++vv D +p v ++h ++++l
tr|W4YIM5|W4YIM5_STRPU 307 KGEVVYSCDLNTV-TLKDLEMIKQDFsFTISKQGTLHgfaswfsvefEALHKSRAECVVLDTSPHVPLTHWKQAAL 381
25899*****997.57889999999966666666555444444444556666****************99998876 PP
>> tr|W4XE58|W4XE58_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.4 0.0 1e-05 0.012 21 100 .. 67 158 .. 59 203 .. 0.73
Alignments for each domain:
== domain 1 score: 16.4 bits; conditional E-value: 1e-05
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.................---TT-EEEE--TTSSSHHHHHHHHHHHSSEEE CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.................aplpgvttiqgditdpetiekikealserkvdl 90
++ +vvDlg+++G + +++ +g+kg vv+vD+ p p+v++ +g i + + ++++++ d+
tr|W4XE58|W4XE58_STRPU 67 EDARVVDLGSGTGRDCYAISKLVGPKGFVVGVDMTDEqlelarkyvthhqekfgYPAPNVEFRKGYIENLKD-----AHVEDNQYDI 148
5678******************************77746544444433333322233444444444433333.....4455588999 PP
EEE------- CS
FtsJ 91 vvsDgapdvs 100
vvs + + s
tr|W4XE58|W4XE58_STRPU 149 VVSNCVINLS 158
9998886654 PP
>> tr|W4XRY6|W4XRY6_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.8 0.0 6.4e-05 0.076 20 76 .. 248 315 .. 235 402 .. 0.73
2 ? -1.2 0.1 2.6 3.1e+03 63 102 .. 502 549 .. 455 562 .. 0.67
Alignments for each domain:
== domain 1 score: 13.8 bits; conditional E-value: 6.4e-05
-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--...........---TT-EEEE--TTSSSHH CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm...........aplpgvttiqgditdpeti 76
kpg +v+D ++aPG+ + ++ l +++k++++Dl p a ++ +ti+ d+++ +
tr|W4XRY6|W4XRY6_STRPU 248 KPGSHVIDACSAPGNKTSHMASLLRNDAKIYSYDLDPKrisvmntllerAGVSAAKTIHQDFLTTDPC 315
59999******************9989********998777776554433335666667777444333 PP
== domain 2 score: -1.2 bits; conditional E-value: 2.6
-EEEE--TTSSSHHHHHHHHHHH.......SSEEEEEE-.------S- CS
FtsJ 63 vttiqgditdpetiekikealse.......rkvdlvvsD.gapdvsgv 102
+ +++d+++ ++++k ++ ++ vd+ sD ++ dv+ +
tr|W4XRY6|W4XRY6_STRPU 502 EEALKADVMEDDQKDKNERKKKKkrrkeneMNVDVCASDeISDDVKQI 549
455577777777777555333224444444778888888444555554 PP
>> tr|W4Y3J6|W4Y3J6_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.5 0.0 3.8e-05 0.046 20 132 .. 703 833 .. 692 854 .. 0.65
Alignments for each domain:
== domain 1 score: 14.5 bits; conditional E-value: 3.8e-05
-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS-----TT-EEE.....E--TTSSSHHHHHHHHHHH.......SSEEEEEE- CS
FtsJ 20 kpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpmaplpgvtti.....qgditdpetiekikealse.......rkvdlvvsD 94
++g++++D +a+PG+ + +++ ++++g+++a D ++ +v+ + ++ it+ ++ + ++d v+ D
tr|W4Y3J6|W4Y3J6_STRPU 703 HEGEKILDMCASPGSKTTYIAALMKNTGMLFANDANKK----RVSALvgnlhRCGITNTVICNED-----GksfpkvmGGFDRVLLD 780
47899*******************999*******9986....33333111123333333333322.....12222244346666666 PP
------S-HHHHHHHH...............HHHHHHHHHHHHHHEEEEEEEE CS
FtsJ 95 gapdvsgvhdldeylq...............sqLllaalelalkllkpggtfv 132
+ +gv ++d++++ +L+laa+ + k+gg +v
tr|W4Y3J6|W4Y3J6_STRPU 781 APCSGTGVIAKDTAVKlskdegdiqrcshlqKELILAAIDSIDANSKTGGYLV 833
66555666555555555555555555555545777777777777777777766 PP
>> tr|W4YGN5|W4YGN5_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 15.0 0.0 2.7e-05 0.032 21 58 .. 42 80 .. 24 169 .. 0.69
Alignments for each domain:
== domain 1 score: 15.0 bits; conditional E-value: 2.7e-05
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.....- CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.....a 58
pg vvD+g++ G+++q l++++ + +++D+ + +
tr|W4YGN5|W4YGN5_STRPU 42 PG-LVVDVGCGSGQFTQSLARHF---DRALGFDISEAqieeaK 80
32.4******************7...57999999887554432 PP
>> tr|W4Y7K6|W4Y7K6_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 15.1 0.0 2.5e-05 0.03 14 61 .. 264 309 .. 253 329 .. 0.78
Alignments for each domain:
== domain 1 score: 15.1 bits; conditional E-value: 2.5e-05
HHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--..---T CS
FtsJ 14 ekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm..aplp 61
+++ +f ++k v+D+g+++G s ++++ ga kv+avD+ + + ++
tr|W4Y7K6|W4Y7K6_STRPU 264 NQY-IF-KDKVVLDVGCGTGILSMFAAKA-GA-RKVIAVDQSDIvyQAMD 309
444.46.7889******************.88.9******9988764443 PP
>> tr|W4Z5B8|W4Z5B8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.3 0.0 4.3e-05 0.051 21 76 .. 67 125 .. 16 150 .] 0.72
Alignments for each domain:
== domain 1 score: 14.3 bits; conditional E-value: 4.3e-05
TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.....---TT-EEEE--TTSSSHH CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.....aplpgvttiqgditdpeti 76
++ +vvDlg+++G + +++ +g+kg vv++D+ + + vt +q + p+
tr|W4Z5B8|W4Z5B8_STRPU 67 EDARVVDLGSGTGRDCYAISKLVGPKGFVVGIDMTDEqlelaR--KYVTHHQEKFGYPAPN 125
4578******************************776454440..4444444433333333 PP
>> tr|W4ZK94|W4ZK94_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.0 0.0 0.00023 0.28 15 54 .. 42 72 .. 28 98 .. 0.65
2 ? -1.1 0.0 2.4 2.9e+03 122 133 .. 105 116 .. 83 141 .. 0.78
Alignments for each domain:
== domain 1 score: 12.0 bits; conditional E-value: 0.00023
HH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES CS
FtsJ 15 kfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDl 54
+ vvD+g++ G+++q l++++ + +++
tr|W4ZK94|W4ZK94_STRPU 42 HE------SLVVDIGCGSGQFTQSLARHFD---RAIGISS 72
33......349**************99982...3333333 PP
== domain 2 score: -1.1 bits; conditional E-value: 2.4
HHHEEEEEEEEE CS
FtsJ 122 lkllkpggtfvl 133
++l+pgg++v+
tr|W4ZK94|W4ZK94_STRPU 105 DRVLRPGGHVVI 116
479999999985 PP
>> tr|W4YD96|W4YD96_STRPU mRNA cap guanine-N7 methyltransferase OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.5 0.1 0.00016 0.19 20 134 .. 102 226 .. 85 246 .. 0.58
Alignments for each domain:
== domain 1 score: 12.5 bits; conditional E-value: 0.00016
-TT-EEEEES-TT-H....HHHHHTTT...-SEEEEEESS-----TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE-------S- CS
FtsJ 20 kpgktvvDlgaaPGg....wsqvllqrlgakgkvvavDlqpmaplpgvttiqgditdpetiekikealserkvdlvvsDgapdvsgv 102
k+g tv+Dl+++ Gg w++ ++l + + av +q+++++ + +++ + ++ +++ + ++++ +D a+
tr|W4YD96|W4YD96_STRPU 102 KKGCTVLDLCCGKGGdllkWTKGHIKKLVC-ADIAAVSVQQCQKRYN-DMVERNRRSGNQKT-F-------AAEFISADCAEVLLTE 178
48899*********8777799999999866.8999999999955522.12223322222222.1.......2444444544333332 PP
HHHHHHHHHHHHHHHHHHHHH................HEEEEEEEEEE CS
FtsJ 103 hdldeylqsqLllaalelalk................llkpggtfvlk 134
+ +++ + +L+ +++++ + l+pgg fv
tr|W4YD96|W4YD96_STRPU 179 RYQEKDMLFDLCSCQFSFHYSfeaaarartmlrnaceRLRPGGYFVGT 226
333333333444444444333333333333333333388888888855 PP
>> tr|W4ZFV8|W4ZFV8_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.4 0.0 0.00017 0.2 12 70 .. 198 263 .. 195 383 .. 0.79
Alignments for each domain:
== domain 1 score: 12.4 bits; conditional E-value: 0.00017
HHHHH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--..........---TT-EEEE--T CS
FtsJ 12 idekfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm..........aplpgvttiqgdi 70
i e++k g +++Dlg++ G+ s v ++ ++ vv++D q+ + l +v++++ d
tr|W4ZFV8|W4ZFV8_STRPU 198 IEEQMK---SGIRILDLGCGRGSASLVFAESYP-NSTVVGLDFsQEAinygkerakeKGLTNVEFVCEDA 263
555555...7889******************76.599******555578887665433336777776665 PP
>> tr|W4ZAS4|W4ZAS4_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.7 0.0 0.00014 0.17 15 97 .. 143 228 .. 129 299 .. 0.83
Alignments for each domain:
== domain 1 score: 12.7 bits; conditional E-value: 0.00014
HH--S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEESS--.........---TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEE CS
FtsJ 15 kfklfkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDlqpm.........aplpgvttiqgditdpetiekikealserkvdlvv 92
+ + +kpg +v+ lgaa G ++ +g++g v+av + +++ ++ i d ++p + +++ vd+v
tr|W4ZAS4|W4ZAS4_STRPU 143 HIH-MKPGSKVLYLGAASGTTVSHVSDLVGPEGLVYAVEFSHRsgrdlmnvaKKRTNIIPIIEDARHPHKYRMLVG-----MVDCVF 223
455.689*********************************998788665554444666666999999999998885.....59**** PP
E---- CS
FtsJ 93 sDgap 97
+D+a
tr|W4ZAS4|W4ZAS4_STRPU 224 ADVAQ 228
**994 PP
>> tr|W4Z0W7|W4Z0W7_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.5 0.0 0.00015 0.18 19 93 .. 124 201 .. 93 260 .. 0.72
Alignments for each domain:
== domain 1 score: 12.5 bits; conditional E-value: 0.00015
S-TT-EEEEES-TT-HHHHHHTTT...-SEEEEEES.S--.......---TT-EEEE--TTSSSHHHHHHHHHHHSSEEEEEE CS
FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlgakgkvvavDl.qpm.......aplpgvttiqgditdpetiekikealserkvdlvvs 93
++ + v+Dlg++ G + ++qr+ ++ +++D+ q+ a ++++ ++ ++ ++++ + +++ + ++lv++
tr|W4Z0W7|W4Z0W7_STRPU 124 LETNVSVLDLGCGQGHATMLMAQRFP-GCTFYGLDIsQKAiaearaeA--ARLSLTNCKFMVQDVATLPHTWT--NTFQLVTC 201
455667******************96.6********555487655331..44444444444444444444433..23555555 PP
>> tr|W4YWV3|W4YWV3_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.5 0.0 0.00066 0.78 72 160 .. 17 101 .. 3 103 .. 0.85
2 ? 5.8 0.0 0.018 22 2 43 .. 75 119 .. 74 126 .] 0.77
Alignments for each domain:
== domain 1 score: 10.5 bits; conditional E-value: 0.00066
SSSHHHHHHHHHHHSSEEEEEE-------S-HHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE-STTHHHHHHHHGGGEEEEEEE CS
FtsJ 72 dpetiekikealserkvdlvvsDgapdvsgvhdldeylqsqLllaalelalkllkpggtfvlkifrgeeteallkqlkkfFekvsvv 158
++e+ +++++++++r+ ++ v D+ v + d++++ L+l+ + +k +++g fv+ + + +++l+++ ++F+++ ++
tr|W4YWV3|W4YWV3_STRPU 17 MQEVFPELRRYCQQRQLEFEVVDMRWGVRDSATADHLTSF-LCLNEIDR-CKRMSQGPYFVVRVGM--KLKSMLNHTHEYFSEMGIR 99
44555567777778****************9*****9997.*****999.789999*****99966..8999**********99998 PP
-- CS
FtsJ 159 kP 160
P
tr|W4YWV3|W4YWV3_STRPU 100 GP 101
77 PP
== domain 2 score: 5.8 bits; conditional E-value: 0.018
TSHHHHHHHHHHHHH-.-S-..TT-EEEEES-TT-HHHHHHTTT. CS
FtsJ 2 rsRsayKLleidekfk.lfk..pgktvvDlgaaPGgwsqvllqrl 43
+ R ++KL ++++ + f+ + ++++ G++s v +++
tr|W4YWV3|W4YWV3_STRPU 75 VVRVGMKLKSMLNHTHeYFSemGIRGPLHVCVELGSFSHVHCKKN 119
568889999988777646654455679*************99984 PP
>> tr|W4XX51|W4XX51_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.4 0.1 0.00071 0.85 21 44 .. 282 315 .. 258 449 .. 0.75
Alignments for each domain:
== domain 1 score: 10.4 bits; conditional E-value: 0.00071
TT-EEEEES-TT-HHHHHHTTT............ CS
FtsJ 21 pgktvvDlgaaPGgwsqvllqrl..........g 44
++ v+Dl+a+PGg s +lq +
tr|W4XX51|W4XX51_STRPU 282 TDDVVLDLCAGPGGKSVAILQTMlistltanekV 315
4467***************999977666544330 PP
>> tr|W4YR02|W4YR02_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.2 0.0 0.00038 0.45 19 45 .. 227 253 .. 186 265 .. 0.87
Alignments for each domain:
== domain 1 score: 11.2 bits; conditional E-value: 0.00038
S-TT-EEEEES-TT-HHHHHHTTT... CS
FtsJ 19 fkpgktvvDlgaaPGgwsqvllqrlga 45
+kp ++v+D +aaPG+ + l + l+a
tr|W4YR02|W4YR02_STRPU 227 VKPHHKVLDMCAAPGSKTAQLIEMLHA 253
468899**********99888888765 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (177 nodes)
Target sequences: 28594 (14266044 residues searched)
Passed MSV filter: 736 (0.0257397); expected 571.9 (0.02)
Passed bias filter: 632 (0.0221025); expected 571.9 (0.02)
Passed Vit filter: 76 (0.0026579); expected 28.6 (0.001)
Passed Fwd filter: 24 (0.000839337); expected 0.3 (1e-05)
Initial search space (Z): 28594 [actual number of targets]
Domain search space (domZ): 24 [number of targets reported over threshold]
# CPU time: 0.25u 0.01s 00:00:00.26 Elapsed: 00:00:00.10
# Mc/sec: 25250.90
//
[ok]