# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/MT-A70.hmm.txt
# target sequence database: proteomes/Amphimedon_queenslandica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: MT-A70 [M=172]
Accession: PF05063.13
Description: MT-A70
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-58 198.9 0.0 2.3e-58 198.2 0.0 1.3 1 tr|A0A1X7VR21|A0A1X7VR21_AMPQE Uncharacterized protein OS=Amphi
1.2e-55 189.4 0.1 2.2e-55 188.5 0.1 1.4 1 tr|A0A1X7TVM4|A0A1X7TVM4_AMPQE Uncharacterized protein OS=Amphi
1.6e-36 127.1 0.0 2.4e-26 93.9 0.1 2.2 2 tr|A0A1X7VK93|A0A1X7VK93_AMPQE Uncharacterized protein OS=Amphi
Domain annotation for each sequence (and alignments):
>> tr|A0A1X7VR21|A0A1X7VR21_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 198.2 0.0 1.6e-62 2.3e-58 1 172 [] 318 479 .. 318 479 .. 0.98
Alignments for each domain:
== domain 1 score: 198.2 bits; conditional E-value: 1.6e-62
ECEEEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE CS
MT-A70 1 fdviiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlki 79
f+v+++dPpw++++ elpy+t++++e+++L+ip+l+d++ ++flWvt+r+++ + re+l Wg+e+++el w+k+
tr|A0A1X7VR21|A0A1X7VR21_AMPQE 318 FAVVMADPPWDIHM-----ELPYGTMSDDEMRQLDIPSLQDDG-FIFLWVTGRAMELG-RECLTLWGYERIDELVWVKT 389
89************.....9*********************99.*************9.******************** PP
-TTSCBS-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET CS
MT-A70 80 nklgepiatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrKPpelfellehllesarkLelF 158
n+l+++i+t+++g+++++ kEh+lvg kgn + +n+++dtd+i++++r +srKP+e++ ++e+l++++rk+elF
tr|A0A1X7VR21|A0A1X7VR21_AMPQE 390 NQLQRLIRTGRTGHWINHGKEHCLVGAKGNLQ-----GVNRGIDTDVIVAEVRATSRKPDEIYGVIERLSPGTRKIELF 463
*******************************8.....68999************************************* PP
--G..--TTEEEEETT CS
MT-A70 159 aRs..lrpgwltvGne 172
+R+ +p+wlt+Gn+
tr|A0A1X7VR21|A0A1X7VR21_AMPQE 464 GRQhnCQPNWLTLGNQ 479
***99*********97 PP
>> tr|A0A1X7TVM4|A0A1X7TVM4_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 188.5 0.1 1.5e-59 2.2e-55 1 171 [. 205 382 .. 205 383 .. 0.95
Alignments for each domain:
== domain 1 score: 188.5 bits; conditional E-value: 1.5e-59
ECEEEE---BHHCC..HTT..--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEE CS
MT-A70 1 fdviiidPpweeklvarkk..elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwl 77
fdvi+idPp+ee+ +r++ + p + ++ ee+++L+i+++ ++rs+vflW+++ e+l+l+re+lkkWg++++e+++w+
tr|A0A1X7TVM4|A0A1X7TVM4_AMPQE 205 FDVILIDPPLEEYQ-RRTTgiTYPWQPWDFEEIMNLKIEDVSAPRSFVFLWCGSCEGLDLGRECLKKWGFRRCEDICWV 282
9************9.55555888889***************************************************** PP
EE-TTSCBS-..BS-TTSSSBB-EEEEEEEEES---TTT.T.TB-TTSSBSEEEE..E-CTTTSS-THHHHHHHHHCTC CS
MT-A70 78 kinklgepia..tlesgavlkkskEhllvgvkgnvkrstdk.iinknvdtdliis..perehsrKPpelfellehlles 151
k+n ++p+ +le + +++++kEh+l+g+kg+v+r+ d+ +i++n+d d+iis pe ++ KP+e+f+++eh++ +
tr|A0A1X7TVM4|A0A1X7TVM4_AMPQE 283 KTN-MNDPGNttHLEQKSIFQHTKEHCLMGIKGTVRRNQDGhFIHANIDLDIIISeePEMGNNDKPEEIFHIIEHFCLG 360
***.77777655789999*************************************99999******************* PP
S-EEEET--G..--TTEEEEET CS
MT-A70 152 arkLelFaRs..lrpgwltvGn 171
+++L+lF+ + +rpgwlt+G+
tr|A0A1X7TVM4|A0A1X7TVM4_AMPQE 361 RKRLHLFGNDatVRPGWLTLGP 382
**********99*********7 PP
>> tr|A0A1X7VK93|A0A1X7VK93_AMPQE Uncharacterized protein OS=Amphimedon queenslandica OX=400682 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 93.9 0.1 1.7e-30 2.4e-26 1 108 [. 199 304 .. 199 315 .. 0.93
2 ! 30.9 0.0 3.7e-11 5.4e-07 123 172 .] 381 431 .. 357 431 .. 0.85
Alignments for each domain:
== domain 1 score: 93.9 bits; conditional E-value: 1.7e-30
ECEEEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHH..HHHHHHHCT-EEEEEEEEE CS
MT-A70 1 fdviiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellel..krellkkWglelveeltwl 77
+++i++dPpwe+++ r +yk l++e++++Lpipel ++++lv+lWvtn+ l + +ell+kWgle + e+ w+
tr|A0A1X7VK93|A0A1X7VK93_AMPQE 199 YNIIVLDPPWENRSAIRGG--KYKWLDKEDISQLPIPELIAPGGLVALWVTNKRQLVQwtVQELLPKWGLEYIGEWLWI 275
899***********77775..9*******************************99999899****************** PP
EE-TTSCBS-BS-TTSSSBB-EEEEEEEEES CS
MT-A70 78 kinklgepiatlesgavlkkskEhllvgvkg 108
k++++g+ +++ ++ v+kk++E+l++g +
tr|A0A1X7VK93|A0A1X7VK93_AMPQE 276 KVTTEGDFVFD--VDSVHKKPYESLIIGKRP 304
**********7..7778***********985 PP
== domain 2 score: 30.9 bits; conditional E-value: 3.7e-11
SBSEEEEE-CTTTSS-THHHHHHHHHC..TCS-EEEET--G--TTEEEEETT CS
MT-A70 123 dtdliisperehsrKPpelfellehll..esarkLelFaRslrpgwltvGne 172
+ l+ p++ hs+KP l ++l+ + +++++LelFaR+l pgw+++Gne
tr|A0A1X7VK93|A0A1X7VK93_AMPQE 381 QYSLMCIPSTTHSQKPY-LGDILQLYAesKDMKCLELFARNLLPGWTSWGNE 431
66777789********9.899999888788999*****************97 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (172 nodes)
Target sequences: 43435 (14716620 residues searched)
Passed MSV filter: 1143 (0.0263152); expected 868.7 (0.02)
Passed bias filter: 795 (0.0183032); expected 868.7 (0.02)
Passed Vit filter: 49 (0.00112812); expected 43.4 (0.001)
Passed Fwd filter: 3 (6.90687e-05); expected 0.4 (1e-05)
Initial search space (Z): 43435 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.20u 0.01s 00:00:00.21 Elapsed: 00:00:00.10
# Mc/sec: 25312.59
//
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