# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/MT-A70.hmm.txt # target sequence database: proteomes/Drosophila_melanogaster.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: MT-A70 [M=172] Accession: PF05063.13 Description: MT-A70 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-63 213.4 0.0 2.4e-63 212.8 0.0 1.3 1 sp|Q9VLP7|MET14_DROME N6-adenosine-methyltransferase non-ca 1.5e-59 200.4 0.0 3.6e-59 199.2 0.0 1.7 1 sp|Q9VCE6|MTA70_DROME N6-adenosine-methyltransferase MT-A70 2.3e-57 193.3 0.1 3.2e-57 192.8 0.1 1.2 1 tr|Q9VER8|Q9VER8_DROME LD37858p OS=Drosophila melanogaster O Domain annotation for each sequence (and alignments): >> sp|Q9VLP7|MET14_DROME N6-adenosine-methyltransferase non-catalytic subunit OS=Drosophila melanogaster OX=7227 GN=Met # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 212.8 0.0 5.2e-67 2.4e-63 1 172 [] 158 340 .. 158 340 .. 0.98 Alignments for each domain: == domain 1 score: 212.8 bits; conditional E-value: 5.2e-67 ECEEEE---BHHCC..HTT.....--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTS CS MT-A70 1 fdviiidPpweeklvarkk.....elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklg 83 fdvi+i+Pp+ee+++a+ + +p++++n++++++L++ e++++rs+vflW++++e+l+++r++lkkWg++++e+++w+++n + sp|Q9VLP7|MET14_DROME 158 FDVILIEPPLEEYARAAPSvatvgGAPRVFWNWDDILNLDVGEIAAHRSFVFLWCGSSEGLDMGRNCLKKWGFRRCEDICWIRTN-IN 244 9**************9999**9999************************************************************.99 PP CBS-..BS-TTSSSBB-EEEEEEEEES---TTT.T.TB-TTSSBSEEEE..E-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--T CS MT-A70 84 epia..tlesgavlkkskEhllvgvkgnvkrstdk.iinknvdtdliis..perehsrKPpelfellehllesarkLelFaRs..lrp 164 +p++ +le++av++++kEh+l+g+kg+v+rstd+ +i++nvd+dliis +e+++++KP e+f+++eh++ ++r+L+lF+R+ +rp sp|Q9VLP7|MET14_DROME 245 KPGHskQLEPKAVFQRTKEHCLMGIKGTVRRSTDGdFIHANVDIDLIISeeEEFGSFEKPIEIFHIIEHFCLGRRRLHLFGRDssIRP 332 9999999******************************************988999****************************9**** PP TEEEEETT CS MT-A70 165 gwltvGne 172 gwltvG+e sp|Q9VLP7|MET14_DROME 333 GWLTVGPE 340 ******86 PP >> sp|Q9VCE6|MTA70_DROME N6-adenosine-methyltransferase MT-A70-like protein OS=Drosophila melanogaster OX=7227 GN=Ime4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 199.2 0.0 7.8e-63 3.6e-59 1 172 [] 407 568 .. 407 568 .. 0.98 Alignments for each domain: == domain 1 score: 199.2 bits; conditional E-value: 7.8e-63 ECEEEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCBS-B CS MT-A70 1 fdviiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgepiat 88 f+v+++dPpw++++ elpy+t++++e++aL +p l+d++ l+flWvt+r+++ + r++lk Wg+e+v+el+w+k+n+l+++i+t sp|Q9VCE6|MTA70_DROME 407 FAVVMADPPWDIHM-----ELPYGTMSDDEMRALGVPALQDDG-LIFLWVTGRAMELG-RDCLKLWGYERVDELIWVKTNQLQRIIRT 487 89************.....9*********************99.*************9.***************************** PP S-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEEETT CS MT-A70 89 lesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrKPpelfellehllesarkLelFaRs..lrpgwltvGne 172 +++g++l++ kEh+lvg+kgn++ +n++ d+d+i++++r +s+KP+e++ ++e+l++++rk+elF+R ++p+w+t+Gn+ sp|Q9VCE6|MTA70_DROME 488 GRTGHWLNHGKEHCLVGMKGNPT-----NLNRGLDCDVIVAEVRATSHKPDEIYGIIERLSPGTRKIELFGRPhnIQPNWITLGNQ 568 **********************8.....568999**************************************999*********97 PP >> tr|Q9VER8|Q9VER8_DROME LD37858p OS=Drosophila melanogaster OX=7227 GN=anon-89Eb PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 192.8 0.1 6.9e-61 3.2e-57 1 172 [] 155 335 .. 155 335 .. 0.95 Alignments for each domain: == domain 1 score: 192.8 bits; conditional E-value: 6.9e-61 ECEEEE---BHHCC..HTT....--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHH..HHHHHHHCT-EEEEEEEEEEE-T CS MT-A70 1 fdviiidPpweeklvarkk....elpyktlneeelkaLpipelldkrslvflWvtnrellel..krellkkWglelveeltwlkink 81 +d+i++dPpw++k+++r k el y++l++e+l+++p+++l+++rslv++W+tn++l++l +++ll++W+l+l+++l+w+k+++ tr|Q9VER8|Q9VER8_DROME 155 YDLIVLDPPWRNKYIRRLKrakpELGYSMLSNEQLSHIPLSKLTHPRSLVAIWCTNSTLHQLalEQQLLPSWNLRLLHKLRWYKLST 241 89***************99999***************************************999*********************** PP TSCBS-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEE.E-CTTTSS-THHHHHHHHHC....TCS-.EEEET--G- CS MT-A70 82 lgepiatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliis.perehsrKPpelfellehll....esar.kLelFaRsl 162 ++e+ia+++s+ ++k+++E+l+v+++++++++++k i ++t+li+s p+++hs+KPp+l++l+ehll + ++ +LelFaR+l tr|Q9VER8|Q9VER8_DROME 242 DHELIAPPQSDLTQKQPYEMLYVACRSDASENYGKDI---QQTELIFSvPSIVHSHKPPLLSWLREHLLldkdQLEPnCLELFARYL 325 *********************************9944...58888888*********************998844546********* PP -TTEEEEETT CS MT-A70 163 rpgwltvGne 172 +p+++++G e tr|Q9VER8|Q9VER8_DROME 326 HPHFTSIGLE 335 ********76 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (172 nodes) Target sequences: 13786 (7394964 residues searched) Passed MSV filter: 384 (0.0278543); expected 275.7 (0.02) Passed bias filter: 276 (0.0200203); expected 275.7 (0.02) Passed Vit filter: 21 (0.00152328); expected 13.8 (0.001) Passed Fwd filter: 3 (0.000217612); expected 0.1 (1e-05) Initial search space (Z): 13786 [actual number of targets] Domain search space (domZ): 3 [number of targets reported over threshold] # CPU time: 0.10u 0.01s 00:00:00.11 Elapsed: 00:00:00.07 # Mc/sec: 18170.48 // [ok]