# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/MT-A70.hmm.txt # target sequence database: proteomes/Ornithorhynchus_anatinus.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: MT-A70 [M=172] Accession: PF05063.13 Description: MT-A70 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2.6e-63 213.3 0.0 3.5e-63 212.9 0.0 1.2 1 tr|F7AFC3|F7AFC3_ORNAN Methyltransferase like 14 OS=Ornithor 1.5e-37 129.4 0.1 2e-37 129.0 0.1 1.2 1 tr|F6QUP5|F6QUP5_ORNAN Uncharacterized protein OS=Ornithorhy Domain annotation for each sequence (and alignments): >> tr|F7AFC3|F7AFC3_ORNAN Methyltransferase like 14 OS=Ornithorhynchus anatinus OX=9258 GN=METTL14 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 212.9 0.0 3.2e-67 3.5e-63 1 171 [. 110 286 .. 110 287 .. 0.96 Alignments for each domain: == domain 1 score: 212.9 bits; conditional E-value: 3.2e-67 ECEEEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCBS- CS MT-A70 1 fdviiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgepia 87 fdvi+++Pp+ee++++ ++++k+++++++++L+i+e++++rs+vflW+++ e+l+l+r++l+kWg++++e+++w+k+n +++p++ tr|F7AFC3|F7AFC3_ORNAN 110 FDVILLEPPLEEYYRETGITANEKCWTWDDIMKLEIEEIAAPRSFVFLWCGSGEGLDLGRVCLRKWGYRRCEDICWIKTN-KNNPGK 195 9*************66555*************************************************************.556555 PP ..BS-TTSSSBB-EEEEEEEEES---TTT.T.TB-TTSSBSEEEE..E-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEE CS MT-A70 88 ..tlesgavlkkskEhllvgvkgnvkrstdk.iinknvdtdliis..perehsrKPpelfellehllesarkLelFaRs..lrpgwl 167 tl+++av++++kEh+l+g+kg+v+rstd+ +i++nvd+dlii+ pe+++++KP e+f+++eh++ ++r+L+lF+R+ +rpgwl tr|F7AFC3|F7AFC3_ORNAN 196 tkTLDPKAVFQRTKEHCLMGIKGTVRRSTDGdFIHANVDIDLIITeePEIGNIEKPVEIFHIIEHFCLGRRRLHLFGRDstIRPGWL 282 569******************************************999*************************************** PP EEET CS MT-A70 168 tvGn 171 tvG+ tr|F7AFC3|F7AFC3_ORNAN 283 TVGP 286 ***7 PP >> tr|F6QUP5|F6QUP5_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 GN=METTL4 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 129.0 0.1 1.9e-41 2e-37 1 172 [] 271 448 .. 271 448 .. 0.90 Alignments for each domain: == domain 1 score: 129.0 bits; conditional E-value: 1.9e-41 ECEEEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHH..HHHHHHHCT-EEEEEEEEEEE-TTSCB CS MT-A70 1 fdviiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellel..krellkkWglelveeltwlkinklgep 85 +dvi+idPpw++k+v+r++ +y+ l+ ++k++p+p+l+++++lv Wvtnr+++ k el + W +e ++e+ w+ki++ ge tr|F6QUP5|F6QUP5_ORNAN 271 YDVIVIDPPWQNKSVKRSN--RYGYLSSWQIKQIPLPKLAAPNCLVITWVTNRQKHLSfvKDELYPCWSVETLAEWHWVKITRSGEF 355 8*****************8..9***********************************99999************************* PP S-BS-TTSSSBB-EEEEEEE.EES---TTT.TTB-TTS......SBSEEEE.E-CTTTSS-THHHHHHHHHCTCS-EEEET--G--T CS MT-A70 86 iatlesgavlkkskEhllvg.vkgnvkrstdkiinknv......dtdliis.perehsrKPpelfellehllesarkLelFaRslrp 164 +++l+s +kk++E l++g v+g + + + + +v d ++i+s p + hs+KPp+ l+ + ++ ++LelFaR+l+ tr|F6QUP5|F6QUP5_ORNAN 356 VFPLDSP--HKKPYEGLVLGrVQGRTASPLKSERKPEVeaspipDHKIIVSvPCILHSHKPPLSEVLADYIKPDVECLELFARNLQT 440 **98888..99********955555544333222222234668999999999**********9999999999*************** PP TEEEEETT CS MT-A70 165 gwltvGne 172 gw+++Gne tr|F6QUP5|F6QUP5_ORNAN 441 GWTSWGNE 448 ******97 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (172 nodes) Target sequences: 21677 (8259262 residues searched) Passed MSV filter: 505 (0.0232966); expected 433.5 (0.02) Passed bias filter: 374 (0.0172533); expected 433.5 (0.02) Passed Vit filter: 29 (0.00133782); expected 21.7 (0.001) Passed Fwd filter: 2 (9.22637e-05); expected 0.2 (1e-05) Initial search space (Z): 21677 [actual number of targets] Domain search space (domZ): 2 [number of targets reported over threshold] # CPU time: 0.12u 0.01s 00:00:00.13 Elapsed: 00:00:00.07 # Mc/sec: 20294.19 // [ok]