# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/MT-A70.hmm.txt # target sequence database: proteomes/Tetrahymena_thermophila.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: MT-A70 [M=172] Accession: PF05063.13 Description: MT-A70 Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.3e-58 197.0 0.3 7.7e-58 195.8 0.3 1.7 1 tr|Q23TW8|Q23TW8_TETTS N6-adenosine-methyltransferase 70 kDa 3.3e-48 164.4 2.9 4.1e-47 160.9 0.0 2.2 2 tr|I7MGX6|I7MGX6_TETTS MT-a70 family protein OS=Tetrahymena 1.2e-41 143.0 0.0 2.8e-41 141.9 0.0 1.6 1 tr|Q22GC0|Q22GC0_TETTS MT-a70 family protein OS=Tetrahymena 5.6e-31 108.3 0.2 3.5e-20 73.2 0.1 6.2 8 tr|Q23RE0|Q23RE0_TETTS MT-A70 family protein OS=Tetrahymena 2.7e-21 76.8 0.4 1.5e-20 74.4 0.4 2.2 1 tr|I7LVP8|I7LVP8_TETTS MT-a70 family protein OS=Tetrahymena ------ inclusion threshold ------ 0.029 14.8 5.0 0.028 14.9 1.7 2.4 3 tr|Q22XT1|Q22XT1_TETTS Methyltransferase MT, putative OS=Tet 0.047 14.2 2.4 0.14 12.7 2.4 1.8 1 tr|I7M767|I7M767_TETTS MIZ zinc finger protein OS=Tetrahymen 0.086 13.3 0.2 0.29 11.6 0.1 1.8 2 tr|I7M8T2|I7M8T2_TETTS Uncharacterized protein OS=Tetrahymen 0.7 10.4 7.2 0.13 12.8 2.0 2.4 2 tr|Q23A16|Q23A16_TETTS Uncharacterized protein OS=Tetrahymen Domain annotation for each sequence (and alignments): >> tr|Q23TW8|Q23TW8_TETTS N6-adenosine-methyltransferase 70 kDa subunit OS=Tetrahymena thermophila (strain SB210) OX=31 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 195.8 0.3 2.6e-61 7.7e-58 1 172 [] 466 626 .. 466 626 .. 0.98 Alignments for each domain: == domain 1 score: 195.8 bits; conditional E-value: 2.6e-61 ECEEEE---BHHCC..HTT--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCBS- CS MT-A70 1 fdviiidPpweeklvarkkelpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgepia 87 f++i++dPpw++++ +lpy+tl++ e+ka+ ++ l++++ ++flWvt+r+++ + re+l +Wg+++vee++w+k+n+l+++i+ tr|Q23TW8|Q23TW8_TETTS 466 FNCIMADPPWDIHM-----TLPYGTLKDREMKAMRVDLLQEEG-VIFLWVTGRAMELG-RECLTNWGYRRVEEIIWVKTNQLQRIIR 545 89************.....8****************9999888.*************9.**************************** PP BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEEETT CS MT-A70 88 tlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrKPpelfellehllesarkLelFaRs..lrpgwltvGne 172 t+++g++l++skEh+lvg+kgn+k in+++d+d+i+s++re+srKP+e+++l+e+++++ +k+elF+R + pgwlt+Gn+ tr|Q23TW8|Q23TW8_TETTS 546 TGRTGHWLNHSKEHCLVGIKGNPK------INRKIDCDVIVSEVRETSRKPDEIYNLIERMCPGGKKIELFGRPhnTMPGWLTLGNQ 626 ***********************8......88999**************************************9999********97 PP >> tr|I7MGX6|I7MGX6_TETTS MT-a70 family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00558100 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 3.3 1.1 0.035 1.1e+02 87 139 .. 32 90 .. 9 104 .. 0.73 2 ! 160.9 0.0 1.4e-50 4.1e-47 1 171 [. 127 309 .. 127 310 .. 0.92 Alignments for each domain: == domain 1 score: 3.3 bits; conditional E-value: 0.035 -BS-TTSSSBB-EEEEEEEEES---TT..T.T.TB-TTS.SBSEEEE..E-CTTTSS-T CS MT-A70 87 atlesgavlkkskEhllvgvkgnvkrs..tdk.iinknv.dtdliis..perehsrKPp 139 + ++s++ +++ E+ ++ +g++++ + + ++n+++ ++++i+ pe+ ++ P+ tr|I7MGX6|I7MGX6_TETTS 32 QSMSSQQQQNQQQEKQIIIKRGTTSKRndYCQnFVNTHErPQNFIMNirPEERFIEYPK 90 3667889999999*999999998876512445688888889999998666665566665 PP == domain 2 score: 160.9 bits; conditional E-value: 1.4e-50 ECEEEE---BHHCC..HTT......--SS--..B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE CS MT-A70 1 fdviiidPpweeklvarkk......elpykt..lneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlki 79 fdvi++dPpw+e+ +r + + p+k+ ++ +e+ aLpi+e+ dk s++flWv++ +l ++ rel++kWg++++e++ w+k+ tr|I7MGX6|I7MGX6_TETTS 127 FDVIMMDPPWKEYE-ERVQglpiysQYPEKFnsWDLNEIAALPIDEISDKPSFLFLWVGSDHLDQG-RELFRKWGYKRCEDIVWVKT 211 9***********99.5555598888666654227778**************************999.******************** PP -TTSCBS-.BS-TTSSSBB-EEEEEEEEES---TTT.T.TB-TTSSBSEEEE..E-CTTTSS-THHHHHHHHHCTCS-EEEET--G. CS MT-A70 80 nklgepia.tlesgavlkkskEhllvgvkgnvkrstdk.iinknvdtdliis..perehsrKPpelfellehllesarkLelFaRs. 161 nk++++ + +l + l + kEh+lvg++g+vkr d +i++n+dtd+i++ p ++ +KP e+++++e+++ ++++LelF+ tr|I7MGX6|I7MGX6_TETTS 212 NKDKTKEYiELPHSNLLVRVKEHCLVGLRGDVKRASDShFIHANIDTDVIVAeePPLGSTQKPAEIYDIIERFCLGRKRLELFGEVh 298 **999888777777799999*****************9**************99999***************************988 PP .--TTEEEEET CS MT-A70 162 .lrpgwltvGn 171 +r gwlt+G+ tr|I7MGX6|I7MGX6_TETTS 299 nVRQGWLTIGK 309 8*********6 PP >> tr|Q22GC0|Q22GC0_TETTS MT-a70 family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00704040 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 141.9 0.0 9.4e-45 2.8e-41 1 172 [] 259 427 .. 259 427 .. 0.93 Alignments for each domain: == domain 1 score: 141.9 bits; conditional E-value: 9.4e-45 ECEEEE---BHHCC..HTT..--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCB CS MT-A70 1 fdviiidPpweeklvarkk..elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgep 85 fdvi++dPpw+ + + ++ + y l++e+++++pi++l++++ ++f+W n + + +++++Wg++lv+e+tw+k + +g++ tr|Q22GC0|Q22GC0_TETTS 259 FDVIMMDPPWQLSSSQPSRgvAIAYDSLSDEKIQNMPIQSLQQDG-FIFVWAINAKYRVT-IKMIENWGYKLVDEITWVKKTVNGKI 343 9***********9955555889********************999.********999998.*********************66666 PP S-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEEE CS MT-A70 86 iatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrKPpelfellehllesarkLelFaRs..lrpgwltvG 170 + g l+++kE++l+gvkg+v ++ ++kn+ +d+i+s++r++s+KP+e+++ +++l+++ + Le+FaR l+++w+++G tr|Q22GC0|Q22GC0_TETTS 344 AK--GHGFYLQHAKESCLIGVKGDVD---NGRFKKNIASDVIFSERRGQSQKPEEIYQYINQLCPNGNYLEIFARRnnLHDNWVSIG 425 66..68999****************7...34689*****************************************99********** PP TT CS MT-A70 171 ne 172 ne tr|Q22GC0|Q22GC0_TETTS 426 NE 427 97 PP >> tr|Q23RE0|Q23RE0_TETTS MT-A70 family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00388490 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.8 0.6 2.6 7.7e+03 58 97 .. 117 159 .. 107 174 .. 0.68 2 ? -2.6 2.3 2.3 6.9e+03 59 122 .. 332 396 .. 323 413 .. 0.61 3 ? -1.0 0.6 0.71 2.1e+03 90 130 .. 449 490 .. 440 498 .. 0.64 4 ! 73.2 0.1 1.2e-23 3.5e-20 1 120 [. 1108 1232 .. 1108 1258 .. 0.85 5 ! 43.4 0.0 1.7e-14 5.1e-11 116 172 .] 1264 1321 .. 1251 1321 .. 0.86 6 ? -5.8 3.7 9 2.7e+04 69 122 .. 1753 1805 .. 1733 1821 .. 0.70 7 ? -3.6 0.2 4.4 1.3e+04 88 129 .. 1895 1937 .. 1885 1962 .. 0.64 8 ? -4.2 0.3 6.9 2.1e+04 84 113 .. 2055 2084 .. 2039 2098 .. 0.58 Alignments for each domain: == domain 1 score: -2.8 bits; conditional E-value: 2.6 H.HHHHHHHCT-EEEEEEEEEEE-TTSCBS-..BS-TTSSSBB CS MT-A70 58 l.krellkkWglelveeltwlkinklgepia..tlesgavlkk 97 + +r l++ g+e +e++ +k k++++ a t ++++++++ tr|Q23RE0|Q23RE0_TETTS 117 NsQRRKLRSSGIEKQDEISNIKSKKHQKINAkvTQHTEKIMNQ 159 3477888888888889999888886665555444445555544 PP == domain 2 score: -2.6 bits; conditional E-value: 2.3 HHHHHHHCT-EEEEEEEEEEE-TTSCBS-...BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTS CS MT-A70 59 krellkkWglelveeltwlkinklgepia...tlesgavlkkskEhllvgvkgnvkrstdkiinknv 122 kre++k+ l+ +++l ki+ ++++i+ +l++ +++ + kE+l+ + + +s +++i+k+v tr|Q23RE0|Q23RE0_TETTS 332 KREIFKNQELQELQQL--EKISSEQKQIKqtdQLKTLKKQDNNKENLASKIENQKYNSNEHTIKKQV 396 5677776666666655..4777777777754567777777888888887776665555544555554 PP == domain 3 score: -1.0 bits; conditional E-value: 0.71 -TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEE..E CS MT-A70 90 esgavlkkskEhllvgvkgnvkrstdkiinknvdtdliis..p 130 + + + k+ +l +++k++ k k+++ ++ +iis + tr|Q23RE0|Q23RE0_TETTS 449 KEKRIKKRQENKLEIAIKKTQKLLKTKSMQ-MRQQRTIISveI 490 44556667777899******9977766664.446666666342 PP == domain 4 score: 73.2 bits; conditional E-value: 1.2e-23 ECEEEE---BHHCC..HTT..........--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEE CS MT-A70 1 fdviiidPpweeklvarkk..........elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveelt 75 fd++ +dPpw++k ++ +l y t++++e++ +p++ l +k+ ++flW+ n ++ + ++++kWg++lv+++ tr|Q23RE0|Q23RE0_TETTS 1108 FDIVYMDPPWRIKGGQQFDsqfmfsnskfSLDYDTMSNKEIMDIPVERLSNKG-FLFLWILNTQMNTA-IQMMQKWGYNLVDKIV 1190 89***********966554689999999*********************9999.**************.**************** PP EEEE-TTSCBS-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-T CS MT-A70 76 wlkinklgepiatlesgavlkkskEhllvgvkgnvkrstdkiink 120 w+k+ ++ ++ l+ g + +s+E +l+g k ++k i + tr|Q23RE0|Q23RE0_TETTS 1191 WVKMKDKN--VY-LSHGYYFMHSFELCLIGYKNDTKDDLTSIYPA 1232 ****9444..44.567999****************9877664434 PP == domain 5 score: 43.4 bits; conditional E-value: 1.7e-14 TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEEETT CS MT-A70 116 kiinknvdtdliisperehsrKPpelfellehllesarkLelFaRs..lrpgwltvGne 172 +++ +++ ++i++++r++s+KP+e++e++ l ++a+k+elFaR+ lrpgw++vGn+ tr|Q23RE0|Q23RE0_TETTS 1264 HFF-NKISNNVIFAEVRKKSQKPDEIYEIIDLLIPGAKKIELFARNnnLRPGWVSVGNQ 1321 433.456899************************************9**********97 PP == domain 6 score: -5.8 bits; conditional E-value: 9 EEEEEEEEEEE-TTSCBS-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTS CS MT-A70 69 elveeltwlkinklgepiatlesgavlkkskEhllvgvkgnvkrstdkiinknv 122 +lv++++ +++k++++ + +s+++ k+ l+ k+++ ++ +k++++ + tr|Q23RE0|Q23RE0_TETTS 1753 NLVKKIRKKRVSKKQKQQLEDQSEEK-KEENNDQLIDKKSDSINNENKSVDESK 1805 68899999999998888887677754.444555568888888777766665544 PP == domain 7 score: -3.6 bits; conditional E-value: 4.4 BS-TTSSSBB-EEEEEEEEE.S---TTT.TTB-TTSSBSEEEE CS MT-A70 88 tlesgavlkkskEhllvgvk.gnvkrstdkiinknvdtdliis 129 + e ++ +k+s E+ ++ + +n ++++ + +++ +++li tr|Q23RE0|Q23RE0_TETTS 1895 QIEQNQQQKQSDENSFLQINqSNINEQFFDKQHNEYNQKLIQD 1937 5677888999999988887525666555444444446665554 PP == domain 8 score: -4.2 bits; conditional E-value: 6.9 CBS-BS-TTSSSBB-EEEEEEEEES---TT CS MT-A70 84 epiatlesgavlkkskEhllvgvkgnvkrs 113 + + ++ + ++s E+++ vk n +++ tr|Q23RE0|Q23RE0_TETTS 2055 HSYNEENTIQYNNNSVEKIIQDVKENQQKE 2084 444445555566667777776666666533 PP >> tr|I7LVP8|I7LVP8_TETTS MT-a70 family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00136470 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 74.4 0.4 5.2e-24 1.5e-20 29 167 .. 221 359 .. 206 363 .. 0.85 Alignments for each domain: == domain 1 score: 74.4 bits; conditional E-value: 5.2e-24 HHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TT.SCBS-BS-TTSSSBB-EEEEEEEEES---TTT CS MT-A70 29 eelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinkl.gepiatlesgavlkkskEhllvgvkgnvkrst 114 +e+ +L+++ + ++ +++f+W e+++kWg++++++++w+ki k+ g++i + ++++ + +s E++l+gvk+ ++++ tr|I7LVP8|I7LVP8_TETTS 221 QEVFELKVELISKQ-GFLFFWAKDVPTATS-YEIMSKWGYDVIDQIIWVKIDKNeGKMILEDKPDKYFYNSNEMCLIGVKKHPSSKG 305 56667777655555.5*****999988888.9*******************98615566699*********************8554 PP .TTB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEE CS MT-A70 115 dkiinknvdtdliisperehsrKPpelfellehllesarkLelFaRs..lrpgwl 167 +++v ++i+s + ++ P+++++++ ++++ +k+elF ++ +r gw+ tr|I7LVP8|I7LVP8_TETTS 306 -VEYQSKVSNNIIVSHQPQNQSCPDQIYDIIDLMMPGSKKIELFTKQkvIRGGWF 359 .4577889**************************************999999997 PP >> tr|Q22XT1|Q22XT1_TETTS Methyltransferase MT, putative OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_ # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.1 0.0 3.2 9.6e+03 4 14 .. 29 39 .. 27 47 .. 0.81 2 ? 14.9 1.7 9.4e-06 0.028 27 152 .. 110 246 .. 96 262 .. 0.67 3 ? 1.5 0.0 0.12 3.7e+02 94 149 .. 228 287 .. 214 322 .. 0.51 Alignments for each domain: == domain 1 score: -3.1 bits; conditional E-value: 3.2 EEE---BHHCC CS MT-A70 4 iiidPpweekl 14 ii +Pp+++k+ tr|Q22XT1|Q22XT1_TETTS 29 IIEEPPLQKKI 39 8899**99997 PP == domain 2 score: 14.9 bits; conditional E-value: 9.4e-06 -HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCBS-BS-TTSSSBB-EEEEEEE..EES--- CS MT-A70 27 neeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgepiatlesgavlkkskEhllvg..vkgnvk 111 + e+lk+L i++ l +++++f+W + l + ++l+ g++ +e+++ ++++++ + + + ++ ++skE+ + + +++ tr|Q22XT1|Q22XT1_TETTS 110 SIEDLKKLAISDKLINNGIIFIWSEKEILSQI-VDVLEAKGFNYIENFMINQLSADKALEM--QRKNQNQQSKEKKITDffKRLTPQ 193 5689********999999*****988887777.9********************6666555..455567788887654311333333 PP TTT.T......TB-TTS......SBSEEEEE-CTTTSS-THHHHHHHHHCTCS CS MT-A70 112 rstdk......iinknv......dtdliisperehsrKPpelfellehllesa 152 +++ i++++ +d+ + e + +rK ++++ +l++++++a tr|Q22XT1|Q22XT1_TETTS 194 KNIWSditpeqCIEQEKfppnnyVQDIFVNSEYSFFRKSKKILLMLRKFNKDA 246 33221110002233333554333444555566667777777777777777554 PP == domain 3 score: 1.5 bits; conditional E-value: 0.12 SSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEE...E-CTTTSS-THH.HHHHHHHC CS MT-A70 94 vlkkskEhllvgvkgnvkrstdkiinknvdtdliis...perehsrKPpel.fellehll 149 ++ksk ll+ k n ++ + ++ d+++ i+ + + s+K e+ ++++e ll tr|Q22XT1|Q22XT1_TETTS 228 FFRKSKKILLMLRKFNKDAQLELRHQRTSDIFFDIFeqnKPNDVSKKGMEFvYKMIETLL 287 345555555555555555444332223334444333344334445555543255666655 PP >> tr|I7M767|I7M767_TETTS MIZ zinc finger protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_0056143 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.7 2.4 4.6e-05 0.14 53 137 .. 366 448 .. 355 460 .. 0.74 Alignments for each domain: == domain 1 score: 12.7 bits; conditional E-value: 4.6e-05 TCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCBS-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS CS MT-A70 53 rellelkrellkkWglelveeltwlkinklgepiatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrK 137 +++ +++++ l + ++ +lt+ +n ++ i++ + + + +k+ E++++ k+n+k+++d+i ++n +i +++++++ K tr|I7M767|I7M767_TETTS 366 SNKNQQQQNNLTEFSRNRFFKLTL-NLN-KNANIHQDQQNCTNQKTIEECVIINKKNSKSEIDQIEQNNSYNSTINAQKKNSIFK 448 445555566666666666666664.456.67888889*************************99666666677777776666655 PP >> tr|I7M8T2|I7M8T2_TETTS Uncharacterized protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_0058653 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.6 0.1 9.7e-05 0.29 42 72 .. 13 44 .. 2 63 .. 0.80 2 ? -1.3 0.0 0.93 2.8e+03 106 106 .. 114 114 .. 77 157 .. 0.56 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 9.7e-05 CEEEEEEEEETTCHHHH.HHHHHHHCT-EEEE CS MT-A70 42 krslvflWvtnrellel.krellkkWglelve 72 ++s++f +v n+ l+e+ +el++kWgl+ ++ tr|I7M8T2|I7M8T2_TETTS 13 QQSFIFNYVNNEILEEKkIKELFQKWGLNYLT 44 478***********999889********9875 PP == domain 2 score: -1.3 bits; conditional E-value: 0.93 E CS MT-A70 106 v 106 v tr|I7M8T2|I7M8T2_TETTS 114 V 114 2 PP >> tr|Q23A16|Q23A16_TETTS Uncharacterized protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_0088461 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.9 0.3 0.67 2e+03 22 63 .. 341 379 .. 319 442 .. 0.71 2 ? 12.8 2.0 4.3e-05 0.13 55 153 .. 522 621 .. 499 632 .. 0.84 Alignments for each domain: == domain 1 score: -0.9 bits; conditional E-value: 0.67 SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHH CS MT-A70 22 pyktlneeelkaLpipelldkrslvflWvtnrellelkrell 63 +++++++++ ++ ++++l + + + +tn+ l+ +++e + tr|Q23A16|Q23A16_TETTS 341 QNENCQNDQFNHFELEQLHNSD---DIRITNEDLIATHQEQM 379 5556666666666666666655...34455555555444433 PP == domain 2 score: 12.8 bits; conditional E-value: 4.3e-05 HHHHHHHHHHHCT-EEEEEEEE..EEE-TTSCBS-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE-CTTTSS-T CS MT-A70 55 llelkrellkkWglelveeltw..lkinklgepiatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliisperehsrKPp 139 +++++ e l++ +++lv++++ k+n l+++i + ++ +++ +++ ++++ ++i++n++ + i+ + +++ + P+ tr|Q23A16|Q23A16_TETTS 522 KQQQNGETLSNENIKLVHQISIenAKTNSLEDIIIQQNTS-CYQQPLQLGIISSSLTTMKDEIQSIEENKNLNSILKEANKQKQNPE 607 444458999999******9875338**********85555.89999988888887777776667999999***************** PP HHHHHHHHHCTCS- CS MT-A70 140 elfellehllesar 153 lfe++++l+++ r tr|Q23A16|Q23A16_TETTS 608 ALFEIVQKLVQQLR 621 *********97655 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (172 nodes) Target sequences: 26971 (16912921 residues searched) Passed MSV filter: 1853 (0.0687034); expected 539.4 (0.02) Passed bias filter: 512 (0.0189834); expected 539.4 (0.02) Passed Vit filter: 44 (0.00163138); expected 27.0 (0.001) Passed Fwd filter: 9 (0.000333692); expected 0.3 (1e-05) Initial search space (Z): 26971 [actual number of targets] Domain search space (domZ): 9 [number of targets reported over threshold] # CPU time: 0.27u 0.01s 00:00:00.28 Elapsed: 00:00:00.11 # Mc/sec: 26445.66 // [ok]