# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/MT-A70.hmm.txt
# target sequence database: proteomes/Trichomonas_vaginalis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: MT-A70 [M=172]
Accession: PF05063.13
Description: MT-A70
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.3e-32 114.5 0.0 1.9e-32 114.0 0.0 1.2 1 tr|A2DLK7|A2DLK7_TRIVA MT-A70 family protein OS=Trichomonas
2.3e-31 110.4 0.0 3.9e-31 109.7 0.0 1.4 1 tr|A2DJA1|A2DJA1_TRIVA MT-A70 family protein OS=Trichomonas
2.8e-30 106.9 0.0 4.4e-30 106.3 0.0 1.3 1 tr|A2G7D5|A2G7D5_TRIVA MT-A70 family protein OS=Trichomonas
7.4e-15 56.7 0.0 1.3e-14 55.9 0.0 1.5 1 tr|A2E165|A2E165_TRIVA MT-A70 family protein OS=Trichomonas
------ inclusion threshold ------
0.47 11.8 0.7 1.1 10.6 0.7 1.6 1 tr|A2F5W5|A2F5W5_TRIVA Uncharacterized protein OS=Trichomona
Domain annotation for each sequence (and alignments):
>> tr|A2DLK7|A2DLK7_TRIVA MT-A70 family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_062450 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.0 0.0 1.9e-36 1.9e-32 1 172 [] 221 389 .. 221 389 .. 0.90
Alignments for each domain:
== domain 1 score: 114.0 bits; conditional E-value: 1.9e-36
ECEEEE---BHHCC..HTT..--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCB CS
MT-A70 1 fdviiidPpweeklvarkk..elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgep 85
fdvi +dPpw + + ++ ++y +l ++ ++++p++++++++ +flWv ++l+++ ++l+kWg+e ++ l w+ki+k g+
tr|A2DLK7|A2DLK7_TRIVA 221 FDVITMDPPWLIAQASITRgvAINYDQLGTDTITQIPLHKIQKNG-YIFLWVIASQLENG-IQILNKWGYEFLTYLNWVKISKYGRY 305
8*********87664444455*********************999.**********9999.*********************99998 PP
S-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEE.E-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEE CS
MT-A70 86 iatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliis.perehsrKPpelfellehllesarkLelFaRs..lrpgwltv 169
+ + g l++ kE +l+g kg +++ ++ dlii +s+KP e++el+e++ ++ Le+FaR lr+gw+++
tr|A2DLK7|A2DLK7_TRIVA 306 MP--SHGYYLQHNKETVLIGRKGRDPENMRA----EMFDDLIIQqRGLRQSHKPVEIYELIERVFPNSMYLEIFARPhnLREGWVSM 386
87..58999**************99877744....44456666648899***************************999******** PP
ETT CS
MT-A70 170 Gne 172
G e
tr|A2DLK7|A2DLK7_TRIVA 387 GLE 389
*75 PP
>> tr|A2DJA1|A2DJA1_TRIVA MT-A70 family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_136190 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.7 0.0 3.8e-35 3.9e-31 1 172 [] 226 394 .. 226 394 .. 0.91
Alignments for each domain:
== domain 1 score: 109.7 bits; conditional E-value: 3.8e-35
ECEEEE---BHHCC..HTT..--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCB CS
MT-A70 1 fdviiidPpweeklvarkk..elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgep 85
fdvi +dPpw + ++ ++y +l+++ + ++p++++++++ +f+Wv ++l+++ +ll++Wg+e ++ l w+ki+k g+
tr|A2DJA1|A2DJA1_TRIVA 226 FDVITMDPPWLIAQAGITRgvAINYDQLSTDIIGQIPLQKIQKNG-YIFVWVIASQLENG-IQLLQNWGYEFLTYLNWVKISKYGRY 310
8*********98774333355*********************999.**********9999.*********************99998 PP
S-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEE.E-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEE CS
MT-A70 86 iatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliis.perehsrKPpelfellehllesarkLelFaRs..lrpgwltv 169
+ + g l++ kE +l+g kg+ +++ + n+ dlii + +s+KP e++el+e++ ++ e+FaR lr gw++v
tr|A2DJA1|A2DJA1_TRIVA 311 MP--SHGYYLQHNKETVLIGHKGKDPENM----RPNKFNDLIIQqRSLRQSHKPIEIYELIERVFPNSMYCEIFARPhnLRQGWVSV 391
87..58999**************998777....3467788888868899***************************999******** PP
ETT CS
MT-A70 170 Gne 172
G e
tr|A2DJA1|A2DJA1_TRIVA 392 GLE 394
*76 PP
>> tr|A2G7D5|A2G7D5_TRIVA MT-A70 family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_002370 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 106.3 0.0 4.4e-34 4.4e-30 1 172 [] 241 409 .. 241 409 .. 0.91
Alignments for each domain:
== domain 1 score: 106.3 bits; conditional E-value: 4.4e-34
ECEEEE---BHHCC..HTT..--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCB CS
MT-A70 1 fdviiidPpweeklvarkk..elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgep 85
fdvi++dPpw+++ + ++ el y+ + e e+ ++ip +++++ f+Wv + l + +l+ Wg+++++ + w+k++k g+
tr|A2G7D5|A2G7D5_TRIVA 241 FDVILMDPPWNIQPAQTTRgvELGYELMLESEIASMKIPLVQTNG-YCFMWVVASFLPVG-VSMLQGWGYKVIDFINWIKTSKYGRY 325
9************96666699********************9999.9********99999.9********************88886 PP
S-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEE.E-CTTTSS-THHHHHHHHHCTCS-EEEET--G..--TTEEEE CS
MT-A70 86 iatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliis.perehsrKPpelfellehllesarkLelFaRs..lrpgwltv 169
++ g l++ kE +lvg+kg++ d ++ dlii +s+KPp l++++e++ +++ Le+FaR r+gw+++
tr|A2G7D5|A2G7D5_TRIVA 326 R--PSNGYFLQHDKETCLVGIKGKPLDGED----VDIFNDLIIDeRGARQSHKPPSLYDIIERMFPGRLYLEIFARAhnEREGWVSL 406
5..57999*****************74443....3556899999677899**************************9999******* PP
ETT CS
MT-A70 170 Gne 172
G e
tr|A2G7D5|A2G7D5_TRIVA 407 GLE 409
*75 PP
>> tr|A2E165|A2E165_TRIVA MT-A70 family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_389630 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 55.9 0.0 1.3e-18 1.3e-14 1 131 [. 206 330 .. 206 351 .. 0.85
Alignments for each domain:
== domain 1 score: 55.9 bits; conditional E-value: 1.3e-18
ECEEEE---BHHCC..HTT..--SS--B-HHHHHTS-GGGCECCEEEEEEEEETTCHHHHHHHHHHHCT-EEEEEEEEEEE-TTSCB CS
MT-A70 1 fdviiidPpweeklvarkk..elpyktlneeelkaLpipelldkrslvflWvtnrellelkrellkkWglelveeltwlkinklgep 85
fdvii+dPpw ++ + ++ +l y+ l+ ++++p++ ++d++ +Wv + l + +++k Wg+ +v+ w+ki+k+g+
tr|A2E165|A2E165_TRIVA 206 FDVIIMDPPWMIQPGQVTRgvSLDYNLLEAARIEKMPLKLVQDNG-YCLMWVVASMLSTG-IKMMKTWGYSIVSFGNWVKISKFGRY 290
9**********99644444559****************9999988.999****9998888.*********************99997 PP
S-BS-TTSSSBB-EEEEEEEEES---TTT.TTB-TTSSBSEEEEE- CS
MT-A70 86 iatlesgavlkkskEhllvgvkgnvkrstdkiinknvdtdliispe 131
+ g l++ kE ++gvkg++ + n + +d+i+s++
tr|A2E165|A2E165_TRIVA 291 SP--SNGYFLQHCKETFIIGVKGKPID---G-ANLDAYSDIILSER 330
65..6899***************9963...3.34445566666654 PP
>> tr|A2F5W5|A2F5W5_TRIVA Uncharacterized protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_468600 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.6 0.7 0.00011 1.1 84 156 .. 409 482 .. 401 486 .. 0.87
Alignments for each domain:
== domain 1 score: 10.6 bits; conditional E-value: 0.00011
CBS-BS-TTSSSBB-EEEEEEEEES---TTT.T.TB-TTSSBSEEEEE-CTTTSS-THHHHHHHHHCTCS-EEE CS
MT-A70 84 epiatlesgavlkkskEhllvgvkgnvkrstdk.iinknvdtdliisperehsrKPpelfellehllesarkLe 156
e i +e ++ k Eh +++ + ++++ + ++n +d+ ++ p + hs P +f+l e + e+ +k+e
tr|A2F5W5|A2F5W5_TRIVA 409 ERILSPEKNKQTPKKQEHSSIALSPKKEEKVAErSLNLSTDESEVVLPDTMHSAGPLDMFDLEEEVDERVKKIE 482
4455567788888899**9999999998888888*******************************999988887 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (172 nodes)
Target sequences: 50190 (17055200 residues searched)
Passed MSV filter: 1170 (0.0233114); expected 1003.8 (0.02)
Passed bias filter: 599 (0.0119346); expected 1003.8 (0.02)
Passed Vit filter: 37 (0.000737199); expected 50.2 (0.001)
Passed Fwd filter: 5 (9.96214e-05); expected 0.5 (1e-05)
Initial search space (Z): 50190 [actual number of targets]
Domain search space (domZ): 5 [number of targets reported over threshold]
# CPU time: 0.21u 0.01s 00:00:00.22 Elapsed: 00:00:00.11
# Mc/sec: 26668.13
//
[ok]