# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/MTS.hmm.txt # target sequence database: proteomes/Caenorhabditis_elegans.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: MTS [M=169] Accession: PF05175.13 Description: Methyltransferase small domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.5e-15 57.3 0.0 2.2e-15 56.8 0.0 1.2 1 tr|Q18511|Q18511_CAEEL Uncharacterized protein OS=Caenorhabd 2.4e-14 53.4 0.0 5.2e-13 49.0 0.0 2.0 1 tr|O16582|O16582_CAEEL MethylTransferase modifying glutamine 4.4e-09 36.3 0.0 1.3e-08 34.8 0.0 1.7 1 sp|Q09357|MET16_CAEEL U6 small nuclear RNA (adenine-(43)-N( 5.3e-07 29.5 0.0 0.031 14.0 0.0 2.5 2 tr|Q17539|Q17539_CAEEL Uncharacterized protein OS=Caenorhabd 6.3e-07 29.2 0.0 1.1e-06 28.5 0.0 1.4 1 tr|O01593|O01593_CAEEL Uncharacterized protein OS=Caenorhabd 2.5e-06 27.3 0.0 4.7e-06 26.4 0.0 1.3 1 tr|P91387|P91387_CAEEL Uncharacterized protein OS=Caenorhabd 3.1e-06 27.0 0.0 0.00084 19.1 0.0 2.2 2 sp|Q9U2R0|BIN3D_CAEEL Probable RNA methyltransferase Y17G7B 4.1e-06 26.6 0.0 6.7e-06 25.9 0.0 1.3 1 tr|O01594|O01594_CAEEL Uncharacterized protein OS=Caenorhabd 4.6e-06 26.4 0.0 1.3e-05 24.9 0.0 1.7 1 sp|P34666|COQ5_CAEEL 2-methoxy-6-polyprenyl-1,4-benzoquino 4.7e-06 26.4 0.0 8.2e-06 25.6 0.0 1.3 1 tr|O01889|O01889_CAEEL Uncharacterized protein OS=Caenorhabd 9.6e-06 25.4 0.0 7.6e-05 22.5 0.1 2.3 2 sp|P30643|YNE4_CAEEL Uncharacterized protein R08D7.4 OS=Ca 2.1e-05 24.3 0.1 3.8e-05 23.4 0.1 1.4 1 sp|Q9U2X0|ANM1_CAEEL Protein arginine N-methyltransferase 2.2e-05 24.2 0.0 4.2e-05 23.3 0.0 1.4 1 tr|Q9N5L0|Q9N5L0_CAEEL TRna (tRNA) Methyltransferase homolog 2.3e-05 24.2 0.0 3e-05 23.8 0.0 1.1 1 tr|Q9GZF8|Q9GZF8_CAEEL PRotein arginine MethylTransferase OS 2.5e-05 24.0 0.1 4.6e-05 23.2 0.1 1.3 1 tr|O02325|O02325_CAEEL PRotein arginine MethylTransferase OS 2.8e-05 23.9 0.0 4.8e-05 23.1 0.0 1.3 1 tr|Q21503|Q21503_CAEEL Uncharacterized protein OS=Caenorhabd 4.1e-05 23.3 0.0 6.3e-05 22.7 0.0 1.2 1 sp|O01503|ETKMT_CAEEL Electron transfer flavoprotein beta s 0.00011 22.0 0.0 0.00022 21.0 0.0 1.5 1 sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransf 0.00016 21.4 0.0 0.00025 20.8 0.0 1.3 1 tr|O18235|O18235_CAEEL Ubiquinone biosynthesis O-methyltrans 0.00074 19.3 0.0 0.0013 18.5 0.0 1.4 1 tr|Q9GYH9|Q9GYH9_CAEEL Protein-lysine N-methyltransferase CE 0.0016 18.2 0.0 0.0028 17.4 0.0 1.4 1 tr|Q9NAP7|Q9NAP7_CAEEL Uncharacterized protein OS=Caenorhabd 0.0041 16.8 0.0 0.007 16.1 0.0 1.5 1 tr|O61833|O61833_CAEEL PRotein arginine MethylTransferase OS 0.0045 16.7 0.0 0.0092 15.7 0.0 1.5 1 tr|Q23383|Q23383_CAEEL Methyltransferase-like protein OS=Cae 0.0058 16.3 0.0 0.011 15.4 0.0 1.4 1 sp|A8WHT1|TRM5_CAEEL tRNA (guanine(37)-N1)-methyltransfera 0.0067 16.1 0.1 0.31 10.7 0.0 2.3 2 sp|O44410|RRP8_CAEEL Ribosomal RNA-processing protein 8 OS 0.0098 15.6 0.0 0.017 14.8 0.0 1.3 1 tr|Q2MDF2|Q2MDF2_CAEEL Methyltransferase-like protein OS=Cae ------ inclusion threshold ------ 0.011 15.4 0.0 0.026 14.3 0.0 1.5 1 tr|P91862|P91862_CAEEL Uncharacterized protein OS=Caenorhabd 0.018 14.8 0.0 0.058 13.1 0.0 1.8 1 sp|Q23126|TRMB_CAEEL tRNA (guanine-N(7)-)-methyltransferas 0.019 14.7 0.0 0.028 14.1 0.0 1.2 1 sp|A7IQW5|MT21_CAEEL Protein-lysine methyltransferase C42C 0.024 14.4 0.0 0.31 10.7 0.0 2.3 2 tr|Q20308|Q20308_CAEEL Amine N-MethylTransferase OS=Caenorha 0.028 14.1 0.0 0.05 13.3 0.0 1.3 1 tr|K8ERZ6|K8ERZ6_CAEEL Uncharacterized protein OS=Caenorhabd 0.028 14.1 0.0 0.058 13.1 0.0 1.5 1 sp|Q9XW42|ANM7_CAEEL Protein arginine N-methyltransferase 0.029 14.1 0.1 0.088 12.5 0.0 1.8 2 tr|O18030|O18030_CAEEL DeHydrogenases, Short chain OS=Caenor 0.033 13.9 0.1 0.068 12.9 0.1 1.5 1 tr|Q23195|Q23195_CAEEL Uncharacterized protein OS=Caenorhabd 0.034 13.9 0.0 0.072 12.8 0.0 1.5 1 tr|Q9N470|Q9N470_CAEEL Uncharacterized protein OS=Caenorhabd 0.037 13.7 0.5 0.059 13.1 0.5 1.4 1 sp|P41938|HCDH2_CAEEL Probable 3-hydroxyacyl-CoA dehydrogen 0.039 13.7 0.1 0.096 12.4 0.1 1.6 1 sp|Q23270|TRM1_CAEEL tRNA (guanine(26)-N(2))-dimethyltrans 0.043 13.5 0.0 0.14 11.8 0.0 1.8 2 sp|Q9TYP1|STRM1_CAEEL Sterol 4-C-methyltransferase strm-1 O 0.043 13.5 0.0 0.074 12.8 0.0 1.4 1 tr|B4E3X6|B4E3X6_CAEEL SPermiDine Synthase OS=Caenorhabditis 0.05 13.3 0.0 0.093 12.4 0.0 1.4 1 sp|Q09522|DIM1_CAEEL Probable dimethyladenosine transferas 0.086 12.5 0.0 0.14 11.9 0.0 1.3 1 tr|Q18257|Q18257_CAEEL Uncharacterized protein OS=Caenorhabd 0.11 12.2 0.0 0.14 11.8 0.0 1.2 1 tr|Q21069|Q21069_CAEEL Uncharacterized protein OS=Caenorhabd Domain annotation for each sequence (and alignments): >> tr|Q18511|Q18511_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=C38D4.9 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 56.8 0.0 4.6e-18 2.2e-15 23 138 .. 36 157 .. 27 168 .. 0.86 Alignments for each domain: == domain 1 score: 56.8 bits; conditional E-value: 4.6e-18 HHHHCHCC...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTT...TSTTS-EEEE CS MTS 23 Lletlpke...lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvle...eveekkfdli 101 ++e ++++ + +k++D+GcG G+l +++a +++ +v vd+d +Al+++ +nle+ +++ +e+++ d+l+ +++ + fd+ tr|Q18511|Q18511_CAEEL 36 MMEMIDETigfEGKKLIDIGCGCGMLMTTAATMYELETVLGVDIDDEALKICSRNLETAEVQdrCELLQADILDpesDLPRGTFDVA 122 455556667767789**********************************************99*999999998622267789***** PP EE---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEE CS MTS 102 vsNPPfhagkatelavaeeliaeAkeaLkegGeLliV 138 v NPPf ++++ + +++++ ++ ++gG+ + tr|Q18511|Q18511_CAEEL 123 VINPPFGTKNN--AGIDMQFVQIGLQMVRPGGSVFSL 157 ******77766..8999***************98765 PP >> tr|O16582|O16582_CAEEL MethylTransferase modifying glutamine (Q) OS=Caenorhabditis elegans OX=6239 GN=mtq-2 PE=1 SV= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 49.0 0.0 1.1e-15 5.2e-13 22 159 .. 27 188 .. 20 193 .. 0.78 Alignments for each domain: == domain 1 score: 49.0 bits; conditional E-value: 1.1e-15 HHHHHCHCC......TCSE...EEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTT..S CS MTS 22 lLletlpke......lsgk...vlDlGcGaGvlgaalakesp.eaevtlvdvdarAlesakenleanklevevvasdvleevee..k 96 lL+++++k+ + + vl +GcG Gv+++ + ++ +++ +++d + +Al+++ e+++ n+++++vv +d+++ +e+ + tr|O16582|O16582_CAEEL 27 LLIDAIEKDikeirsR--DpklVLEIGCGSGVVSTFVNQALGgNVTSVATDLNPHALDVTLETAKLNDIKIDVVRTDLFAGLENllG 111 6777777775554321..2455**************9988761566999******************************99995448 PP -EEEEEE---ST..............TTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--EEE CS MTS 97 kfdlivsNPPfh..............agkatelavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnvevv 159 k+d+++ NPP+ ag t ++ ++l+ +e L++ G +++Va + ++++ll+e+ ++++v tr|O16582|O16582_CAEEL 112 KVDVLLFNPPYVptdeepksnieltyAGGRTGRSTLDRLLPRVPELLSPRGVFYLVALHSNDIPALLKEHSEQMTVS 188 **********9632222222222222455566778899999999999999999999999999999999998888765 PP >> sp|Q09357|MET16_CAEEL U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase OS=Caenorhabditis elegans OX=6239 G # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.8 0.0 2.7e-11 1.3e-08 26 121 .. 91 201 .. 86 208 .. 0.84 Alignments for each domain: == domain 1 score: 34.8 bits; conditional E-value: 2.7e-11 HCHCC..TCSE..EEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...........EEEEE-STTTTSTTS-E CS MTS 26 tlpke..lsgk..vlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...........vevvasdvleeveekkf 98 l k+ l+++ +D+G+G+ + a + +++ + + ++d d +++++a+en+++n+l+ v++v dv++++++ ++ sp|Q09357|MET16_CAEEL 91 DLLKAnkLTKNviGIDIGTGTSCIHALIGARQFNWKFIATDGDEKSVRVAHENVAKNGLSssicvvhvnpdVKTVLMDVVNTIPDTDY 178 444443544442258********************************************999999888888899999*********** PP EEEEE---STTTCHCHHHHHHHH CS MTS 99 dlivsNPPfhagkatelavaeel 121 + ++NPPf ++ + +++ e++ sp|Q09357|MET16_CAEEL 179 AFCMCNPPFFEKGNGDDKFCEDI 201 *********99988777776665 PP >> tr|Q17539|Q17539_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=C01B10.8 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.0 0.0 6.5e-05 0.031 31 145 .. 46 164 .. 34 189 .. 0.69 2 ! 12.8 0.0 0.00015 0.071 31 94 .. 456 521 .. 448 538 .. 0.76 Alignments for each domain: == domain 1 score: 14.0 bits; conditional E-value: 6.5e-05 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHH.HHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE-........--ST CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesa.kenleanklevevvasdvleeveekkfdlivsN........PPfh 108 +++ l lGcG+ l+++l ++ + ++ +dv+ ++ ++n e+ ++ ++ + d+ + ++ +iv PP tr|Q17539|Q17539_CAEEL 46 PKDTFLQLGCGNSELATQLYDNGFH-CIHSIDVEPSVIATQiRKNKERLGM--TFETGDAANLSMADEAHTIVIDkgtldallPPSA 129 4667999************997777.69*****998876531555555554..4444454444444444444433233333339977 PP TTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCH CS MTS 109 agkatelavaeeliaeAkeaLkegGeLliVanrklgy 145 ++++ +a+++++++e +++L++gG+ +iV+ + ++ tr|Q17539|Q17539_CAEEL 130 SESD--EALVTKMFEEVHRVLASGGRYIIVTLAQPHI 164 7666..99**********************8766555 PP == domain 2 score: 12.8 bits; conditional E-value: 0.00015 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTST CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeve 94 ++ k++ lG G G+l+a l ++ ++a+vt+v+ d + l++a+ ++ + + ++vv +d+l +++ tr|Q17539|Q17539_CAEEL 456 AQCKMAVLGLGGGLLTAYLVRHFKKAHVTAVELDPEVLKIANSHFSFPHSDarIDVVIQDALIHLQ 521 55678889*********************************9998877777667777777654443 PP >> tr|O01593|O01593_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_R08E5.3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.5 0.0 2.3e-09 1.1e-06 24 138 .. 169 282 .. 152 288 .. 0.78 Alignments for each domain: == domain 1 score: 28.5 bits; conditional E-value: 2.3e-09 HHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-STTTTST..TS-EEEEEE-- CS MTS 24 letlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdvleeve..ekkfdlivsNP 105 +e+l++ +vlD+GcG G+ + la+++p+ + + +d+ A++ ak+ ++++++ +e++++d+ + e ++fdl++ tr|O01593|O01593_CAEEL 169 VEKLEA-GGVRVLDVGCGGGFHSSLLAEQYPKSHFVGLDIGEDAIRQAKQRKTKSGAAfnnLEFIECDAGKMPEiwTDSFDLVLIFD 254 566666.5567*************************************998888877777878888887655444469999999877 PP -STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEE CS MTS 106 PfhagkatelavaeeliaeAkeaLkegGeLliV 138 h+++ + ++e +++Lk++G + +V tr|O01593|O01593_CAEEL 255 ACHDQRR-----PDLCVQEIHRVLKPSGMFAMV 282 7777776.....233344445667777766666 PP >> tr|P91387|P91387_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_K12D9.1 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.4 0.0 9.8e-09 4.7e-06 34 89 .. 168 226 .. 157 242 .. 0.85 Alignments for each domain: == domain 1 score: 26.4 bits; conditional E-value: 9.8e-09 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-ST CS MTS 34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdv 89 +vlD+GcG G+ ++ la+++++ + + +d+ +A++sak n ++ + + +e+v d+ tr|P91387|P91387_CAEEL 168 RVLDVGCGEGFHSCLLAENYSKSQFVGLDICEKAIKSAKLNKKSDGSDfqnLEFVVGDA 226 69*****************************************9998866667776665 PP >> sp|Q9U2R0|BIN3D_CAEEL Probable RNA methyltransferase Y17G7B.18 OS=Caenorhabditis elegans OX=6239 GN=Y17G7B.18 PE=3 S # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.1 0.0 1.8e-06 0.00084 25 77 .. 140 194 .. 135 204 .. 0.89 2 ? 5.6 0.0 0.024 11 118 151 .. 278 313 .. 269 328 .. 0.80 Alignments for each domain: == domain 1 score: 19.1 bits; conditional E-value: 1.8e-06 HHCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHH CS MTS 25 etlpke..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenlea 77 + ++k+ +++++lD+Gc aG+l++++ak + ++ +d+d + + +a++n+++ sp|Q9U2R0|BIN3D_CAEEL 140 SVFQKDwfEHKQALDIGCNAGFLTLSIAKDFSPRRIIGIDIDEHLIGVARKNIRH 194 567777777788*****************99999******************875 PP == domain 2 score: 5.6 bits; conditional E-value: 0.024 HHHHHHHHHHHEEEEEEEEEEEETTSCHHHH..HHH CS MTS 118 aeeliaeAkeaLkegGeLliVanrklgyesl..lee 151 ++++++ A ++L++gG+L+i + + y++ ++e sp|Q9U2R0|BIN3D_CAEEL 278 MRRFFRRAYAQLHPGGRLIIEPQAFDSYKKRakMSE 313 689*****************9999988887655444 PP >> tr|O01594|O01594_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_R08E5.1 PE=4 SV=4 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.9 0.0 1.4e-08 6.7e-06 24 102 .. 173 255 .. 160 268 .. 0.83 Alignments for each domain: == domain 1 score: 25.9 bits; conditional E-value: 1.4e-08 HHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-STTTTST..TS-EEEEE CS MTS 24 letlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdvleeve..ekkfdliv 102 +e+l++ +vlD+GcG G + la+++p+a+ + +++ A++ ak+ ++++++ +e++++d+ + e ++fdl++ tr|O01594|O01594_CAEEL 173 VEKLET-GGMRVLDVGCGGGSHSSLLAEQYPKAHFVGLEIGEDAIRQAKQRKTKSGAAfnnLEFIQCDAGKMPEiwTDSFDLVL 255 566666.5668*************************************999888887777888888887654443368888876 PP >> sp|P34666|COQ5_CAEEL 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Caenorhabditis elegans OX=62 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.9 0.0 2.8e-08 1.3e-05 29 139 .. 93 203 .. 87 220 .. 0.82 Alignments for each domain: == domain 1 score: 24.9 bits; conditional E-value: 2.8e-08 CCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTT.GC...EEEEE-STTT.TSTTS-EEEEEE---STTTCH CS MTS 29 kelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleank.le...vevvasdvle.eveekkfdlivsNPPfhagka 112 + k lD++ G+G ++ ++++sp+a+vt+ d++ l++ k+ +e+++ ++ +e v ++ + +e + +dl + +++ ++ sp|P34666|COQ5_CAEEL 93 VPYNAKCLDMAGGTGDIAFRILRHSPTAKVTVSDINQPMLDVGKKRAEKERdIQpsrAEWVCANAEQmPFESNTYDLFTMSFGIRNCTH 181 5567899***********************************99999876514476777777776651456899*****9999999888 PP CHHHHHHHHHHHHHHHEEEEEEEEEEE CS MTS 113 telavaeeliaeAkeaLkegGeLliVa 139 e++++eA ++Lk+gG+L i sp|P34666|COQ5_CAEEL 182 -----PEKVVREAFRVLKPGGQLAILE 203 .....8999**************9975 PP >> tr|O01889|O01889_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_R08F11.4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.6 0.0 1.7e-08 8.2e-06 34 102 .. 168 241 .. 157 254 .. 0.83 Alignments for each domain: == domain 1 score: 25.6 bits; conditional E-value: 1.7e-08 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-STT...TTSTTS-EEEEE CS MTS 34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdvl...eeveekkfdliv 102 +vlD+GcG G+ + la+++p+ + + +d+ +A+++a+ ++ + + +e+v d+ + + ++fdl++ tr|O01889|O01889_CAEEL 168 RVLDVGCGGGFHSGLLAEHYPKSQFVGLDITEKAIKAARLKKKSDGTDfenLEFVVADAAimpSSW-TDSFDLVI 241 69****************************************999999888888887765221333.48888887 PP >> sp|P30643|YNE4_CAEEL Uncharacterized protein R08D7.4 OS=Caenorhabditis elegans OX=6239 GN=R08D7.4 PE=4 SV=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.5 0.1 1.6e-07 7.6e-05 27 90 .. 182 243 .. 172 254 .. 0.82 2 ? -0.7 0.0 2.1 1e+03 50 98 .. 292 342 .. 287 353 .. 0.75 Alignments for each domain: == domain 1 score: 22.5 bits; conditional E-value: 1.6e-07 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STT CS MTS 27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvl 90 +p+ + +++l lG+G Gv g+a+ak+++ vtl+d d + l++ +en+++n+l+ ++ s++ sp|P30643|YNE4_CAEEL 182 IPS-EYNRILELGSGCGVSGIAIAKMNDC-CVTLTDYDDNVLNLLEENIAKNDLKSDTEDSSAN 243 455.4567*****************8877.7**********************99766655544 PP == domain 2 score: -0.7 bits; conditional E-value: 2.1 HHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-E CS MTS 50 akespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkf 98 +++s+ a v ++ + ++e+ ++ l+ kle ++ +++ ++ e+++ sp|P30643|YNE4_CAEEL 292 LRHSKAAIVACTRRNESSIECFEHHLKMAKLEivEKFEYENGAYTIGENSY 342 455666679999999999**9999999999997556666676666666655 PP >> sp|Q9U2X0|ANM1_CAEEL Protein arginine N-methyltransferase 1 OS=Caenorhabditis elegans OX=6239 GN=prmt-1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.4 0.1 8.1e-08 3.8e-05 32 103 .. 63 138 .. 54 139 .. 0.70 Alignments for each domain: == domain 1 score: 23.4 bits; conditional E-value: 8.1e-08 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.....EEEEE-STTTTST.TS-EEEEEE CS MTS 32 sgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.....vevvasdvleeve.ekkfdlivs 103 ++ v+D+G+G+G+l++ +ak+ + +v +++ + +Al+s k +++n+l+ +++ +dv e +k+d+i+s sp|Q9U2X0|ANM1_CAEEL 63 DKVVMDVGSGTGILSMFAAKAGAK-KVFAMEFSNMALTSRKI-IADNNLDhivevIQAKVEDVHELPGgIEKVDIIIS 138 5679***************98888.8***********98665.55556665833444444444443323467777765 PP >> tr|Q9N5L0|Q9N5L0_CAEEL TRna (tRNA) Methyltransferase homolog OS=Caenorhabditis elegans OX=6239 GN=trm-2a PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.3 0.0 8.8e-08 4.2e-05 34 94 .. 438 503 .. 430 509 .. 0.76 Alignments for each domain: == domain 1 score: 23.3 bits; conditional E-value: 8.8e-08 EEEEET-TTSHHHHHHHHHTTC.E.EEEE..ESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTST CS MTS 34 kvlDlGcGaGvlgaalakespeae.vtlv..dvdarAlesakenleankle..vevvasdvleeve 94 +lD++cG+G +g l+k+ ++ + v ++ + a+A+e ak+n+++nk+e ++++a + +++ tr|Q9N5L0|Q9N5L0_CAEEL 438 ILLDICCGTGTIGQCLLKNIQKSQkVCCIgiEMIAEAVEDAKQNAKQNKMEtcCKYIAGKAEDTFR 503 479**********999998777665766522556799*************9877777766666655 PP >> tr|Q9GZF8|Q9GZF8_CAEEL PRotein arginine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=prmt-4 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.8 0.0 6.2e-08 3e-05 29 98 .. 30 102 .. 21 107 .. 0.78 Alignments for each domain: == domain 1 score: 23.8 bits; conditional E-value: 6.2e-08 CC.....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-E CS MTS 29 ke.....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkf 98 k +++kvlD+GcG+G+ ++++++ + +v+ +d++ + +e +k nl+++ + ++++ +v++ ++kf tr|Q9GZF8|Q9GZF8_CAEEL 30 KLlkynlKDKKVLDIGCGNGLNSTTFLQWGAR-KVVGFDNSQEMIENCK-NLHKSSEQSSFHHLNVTDFQLDEKF 102 33333467789***************996666.9************997.5666666789999998887777776 PP >> tr|O02325|O02325_CAEEL PRotein arginine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=prmt-9 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.2 0.1 9.7e-08 4.6e-05 22 103 .. 158 238 .. 151 239 .. 0.80 Alignments for each domain: == domain 1 score: 23.2 bits; conditional E-value: 9.7e-08 HHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE CS MTS 22 lLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkfdlivs 103 L +t++++++ v D+G+G+G+l+a +a++++ vt++++++ ++ke l++n++e v+v+a++ + + +k d++vs tr|O02325|O02325_CAEEL 158 ALNDTIKSRIT-VVFDIGSGTGILSAIAARKTNL--VTALEENMCLTMISKEVLKRNGVEsrVNVHAKNSTYFETCEKADIVVS 238 44455555444.599*************998777..9***********************997777776655444469999986 PP >> tr|Q21503|Q21503_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_M04B2.2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.1 0.0 1e-07 4.8e-05 31 147 .. 232 356 .. 219 368 .. 0.83 Alignments for each domain: == domain 1 score: 23.1 bits; conditional E-value: 1e-07 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC....EEEEE-STTT.TSTTS-EEEEEE---STTTC. CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle....vevvasdvle.eveekkfdlivsNPPfhagk. 111 + ++D cG G + ++ a +++ d++ +A+ + +n++an + +++++ d+++ + ++++d++v+ Pf ++ tr|Q21503|Q21503_CAEEL 232 PGDIIVDAMCGGGSIPIEGAISWKNSLFLGGDNHEMAMSRCLQNWSANSSSsrsnCDFLTWDATNlPLRDNSIDALVTDLPFGKKIg 318 556699*******************99999******************9988888888888887736779************88763 PP .HCHHH.HHHHHHHHHHHHEEEEEEEEEEEETTSCHHH CS MTS 112 .atela.vaeeliaeAkeaLkegGeLliVanrklgyes 147 t+++ + +l+ae k++L++gG+L++ + k e+ tr|Q21503|Q21503_CAEEL 319 sTTDNRlLYPRLLAEWKRVLRKGGRLVLMTHDKRSLEN 356 2333332678*****************99988876665 PP >> sp|O01503|ETKMT_CAEEL Electron transfer flavoprotein beta subunit lysine methyltransferase homolog OS=Caenorhabditis # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.7 0.0 1.3e-07 6.3e-05 23 93 .. 68 140 .. 63 147 .. 0.77 Alignments for each domain: == domain 1 score: 22.7 bits; conditional E-value: 1.3e-07 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-STTTTS CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdvleev 93 +l++ p + +++D+G+G G ++++ ++ + d+d +Al s+k n++ n+l+ +++ + l++ sp|O01503|ETKMT_CAEEL 68 ILDNKPLFQGSEIVDFGAGCGSASISASIC-GAKKILANDIDRYALLSTKLNFHLNNLRdskIQYSSINFLDDK 140 555555547789**********99987765.5559**********************99866666666666555 PP >> sp|Q27873|PIMT_CAEEL Protein-L-isoaspartate O-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=pcm-1 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.0 0.0 4.6e-07 0.00022 24 94 .. 69 148 .. 65 159 .. 0.80 Alignments for each domain: == domain 1 score: 21.0 bits; conditional E-value: 4.6e-07 HHHCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGC......EEEEE-STTTTST CS MTS 24 letlpke..lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankle......vevvasdvleeve 94 l++l+++ + k+lD+G+G G+l++ +a + ++ v+ ++ + +e++++n+++++ e v +++ d+ + ++ sp|Q27873|PIMT_CAEEL 69 LDYLQNHlvAGAKALDVGSGSGYLTVCMAMMVGRNGtVVGIEHMPQLVELSEKNIRKHHSEqlergnVIIIEGDGRQGFA 148 5677777767889****************99988766999****************998776666555566666666655 PP >> tr|O18235|O18235_CAEEL Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Caenorhabditis elegans OX=6239 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.8 0.0 5.3e-07 0.00025 33 82 .. 77 124 .. 64 161 .. 0.82 Alignments for each domain: == domain 1 score: 20.8 bits; conditional E-value: 5.3e-07 SEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCE CS MTS 33 gkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklev 82 +++D+G+G G+l++ la+ + vt +d+ ++A+e+a++ l+a+ l++ tr|O18235|O18235_CAEEL 77 PRLVDVGSGGGLLSIPLARSGFD--VTGIDATKQAVEAANQSLTAKPLQI 124 469****************7777..9*****************9998884 PP >> tr|Q9GYH9|Q9GYH9_CAEEL Protein-lysine N-methyltransferase CELE_F29B9.1 OS=Caenorhabditis elegans OX=6239 GN=CELE_F29 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.5 0.0 2.7e-06 0.0013 30 81 .. 60 112 .. 48 145 .. 0.68 Alignments for each domain: == domain 1 score: 18.5 bits; conditional E-value: 2.7e-06 C..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC CS MTS 30 e..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle 81 + ++ k+lDlGcG+G + +l ++ + +++ vd +A++++ + +a++ e tr|Q9GYH9|Q9GYH9_CAEEL 60 KtgKDAKILDLGCGNGSVLRKLRSKGFQ-SLKGVDYCQKAVDLSAAASKAEREE 112 2346789*********999988887666.7999999999999888777666544 PP >> tr|Q9NAP7|Q9NAP7_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_K09E4.3 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.4 0.0 6e-06 0.0028 32 103 .. 46 117 .. 22 118 .. 0.83 Alignments for each domain: == domain 1 score: 17.4 bits; conditional E-value: 6e-06 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEESB.HHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 32 sgkvlDlGcGaGvlgaalakespeaevtlvdvd.arAlesakenleanklevevvasdvleeveekkfdlivs 103 + vlD+GcG+G ++ +l ke+ + vd + +A sak + +e ++v ++ l+ ++e++fdl+++ tr|Q9NAP7|Q9NAP7_CAEEL 46 NPLVLDIGCGVGHIAPHLIKENVGK-IIQVDMSgGMAQSSAKCEDPEVIVERRTVDEETLDGFHENQFDLLLT 117 4569****************99985.55666662578888888888888889999999***********9876 PP >> tr|O61833|O61833_CAEEL PRotein arginine MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=prmt-6 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.1 0.0 1.5e-05 0.007 31 85 .. 36 91 .. 21 144 .. 0.81 Alignments for each domain: == domain 1 score: 16.1 bits; conditional E-value: 1.5e-05 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevv 85 ++vlD+GcG+G + +++ + +v vd++ + ++++k ++++ ++++ tr|O61833|O61833_CAEEL 36 VGKEVLDVGCGNGHYSFDFLRWGAH-KVFGVDNSEEMIQICKSSPDFENFNskIDFL 91 5678****************97666.9************999877666665445555 PP >> tr|Q23383|Q23383_CAEEL Methyltransferase-like protein OS=Caenorhabditis elegans OX=6239 GN=CELE_ZK1058.5 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.7 0.0 1.9e-05 0.0092 33 89 .. 81 137 .. 68 155 .. 0.83 Alignments for each domain: == domain 1 score: 15.7 bits; conditional E-value: 1.9e-05 SEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-ST CS MTS 33 gkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdv 89 + l GcG+G + l +e p++++ ++d + +A+++ +e +++ +l+v + d+ tr|Q23383|Q23383_CAEEL 81 ISYLEAGCGVGNMLFPLVAEIPNLKLFAFDFSDNAVKLLEERAKELELSVATSVVDL 137 456889**************************************9999966655554 PP >> sp|A8WHT1|TRM5_CAEEL tRNA (guanine(37)-N1)-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=C53A5.17 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.4 0.0 2.3e-05 0.011 33 100 .. 245 315 .. 234 318 .. 0.83 Alignments for each domain: == domain 1 score: 15.4 bits; conditional E-value: 2.3e-05 SEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC...EEEEE-STTTTSTTS-EEE CS MTS 33 gkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle...vevvasdvleeveekkfdl 100 v D +cG+G+ + + + + +v++ d + ++++ k n+ nk++ +e+++ d+ ++e+ d sp|A8WHT1|TRM5_CAEEL 245 SLVYDACCGIGPFVLPATLKRKPKRVVANDLNPESVKWLKVNVGLNKIKeerIEIHNMDAKMFIKENVADD 315 4589*******99998877777779***********************99889999888877777666665 PP >> sp|O44410|RRP8_CAEEL Ribosomal RNA-processing protein 8 OS=Caenorhabditis elegans OX=6239 GN=T07A9.8 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 10.7 0.0 0.00065 0.31 27 85 .. 191 252 .. 185 261 .. 0.77 2 ? 3.1 0.0 0.14 68 120 148 .. 263 293 .. 258 317 .. 0.80 Alignments for each domain: == domain 1 score: 10.7 bits; conditional E-value: 0.00065 CHCC.TCSEEEEET-TTSHHHHHHHHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGCEEEE CS MTS 27 lpke.lsgkvlDlGcGaGvlgaalakespeae..vtlvdvdarAlesakenleanklevevv 85 l+++ +++v DlGcG ++ a+ ++++ + +++v+ ++ +++k +e++ +++ ++ sp|O44410|RRP8_CAEEL 191 LQSKpDQQSVFDLGCGEAKIAEAVGEKHKIRSfdLVAVNDRVESCDMSKLPAEDSSADIVIY 252 666656788***************99988776336666677788999998888888876655 PP == domain 2 score: 3.1 bits; conditional E-value: 0.14 HHHHHHHHHEEEEEEEEE..EEETTSCHHHH CS MTS 120 eliaeAkeaLkegGeLli..Vanrklgyesl 148 ++i+eA+++Lk gG L i V++r++ +++ sp|O44410|RRP8_CAEEL 263 DFIREARRVLKIGGILKIaeVTSRFVSIKQF 293 79************99875577777776665 PP >> tr|Q2MDF2|Q2MDF2_CAEEL Methyltransferase-like protein OS=Caenorhabditis elegans OX=6239 GN=metl-2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.8 0.0 3.6e-05 0.017 26 136 .. 113 227 .. 108 231 .. 0.74 Alignments for each domain: == domain 1 score: 14.8 bits; conditional E-value: 3.6e-05 HCHCCTCSEEEEET-TTSHHHHHHHHHTTC.E...EEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTT.....S-EEEEEE- CS MTS 26 tlpkelsgkvlDlGcGaGvlgaalakespeae...vtlvdvdarAlesakenleanklevevvasdvleevee.....kkfdlivsN 104 +l+k ++ ++l +GcG+G + l++ +++ + ++ +d +A+++ k + +++++ d+++ +++ +++d+iv+ tr|Q2MDF2|Q2MDF2_CAEEL 113 NLQK-EKIEILEVGCGVGNTTFPLLQVNNSSSrlmLHSCDYAPNAIRVLKSQDAYDPEKMNAFVWDITQPASQeapnvGSLDYIVC- 197 5666.5567************99888776554444999*********999887777666777777776655431111268899998. PP --STTTCHCHHHHHHHHHHHHHHHEEEEEEEE CS MTS 105 PPfhagkatelavaeeliaeAkeaLkegGeLl 136 + +a++ + +++ +++ + Lk+gG+Ll tr|Q2MDF2|Q2MDF2_CAEEL 198 --IYVLSAIHPDNIKNALKNLVRLLKPGGSLL 227 ..777777778888888888888888888886 PP >> tr|P91862|P91862_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_F32A7.4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.3 0.0 5.4e-05 0.026 31 80 .. 204 254 .. 190 270 .. 0.84 Alignments for each domain: == domain 1 score: 14.3 bits; conditional E-value: 5.4e-05 TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTG CS MTS 31 lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankl 80 + ++vlD+G+GaG+ a+++++p+++ +t+vd + + ++++ l++++ tr|P91862|P91862_CAEEL 204 QPETVLDFGSGAGAGFWAIQNKWPDVKeITMVDLSDAMMKFSMDSLRNEQS 254 5678**********99999******999*******9999999988887765 PP >> sp|Q23126|TRMB_CAEEL tRNA (guanine-N(7)-)-methyltransferase OS=Caenorhabditis elegans OX=6239 GN=W02B12.10 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.1 0.0 0.00012 0.058 34 140 .. 69 191 .. 61 211 .. 0.65 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.00012 EEEEET-TTSHHHHHHHHHTTC........EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTT.......S-EEEEEE--- CS MTS 34 kvlDlGcGaGvlgaalakespea.......evtlvdvdarAlesakenleankle..vevvasdvleevee.......kkfdlivsNPP 106 + +D+GcG+G l + l ++p++ +v++ d + +++ ++ ++ ++ v v+ s++++ +++ k+ ++ P sp|Q23126|TRMB_CAEEL 69 DFADIGCGYGGLLMRLSPKYPDNlmigmeiRVKVSDYVNEKIQALRKHHAEAGHYrnVAVLRSNAMKYMPNyfhkgqlSKMFFLFPDPH 157 579****************9986222221145555554445554444444433335666666666655542221211145667778888 PP STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEE CS MTS 107 fhagkatelavaeeliaeAkeaLkegGeLliVan 140 f+++k++ ++ +l+ e + +L+egG ++ ++ sp|Q23126|TRMB_CAEEL 158 FKNKKHKWRIITPTLLSEYAYVLREGGIIYTITD 191 8888888888888999999999999988887765 PP >> sp|A7IQW5|MT21_CAEEL Protein-lysine methyltransferase C42C1.13 OS=Caenorhabditis elegans OX=6239 GN=C42C1.13 PE=3 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.1 0.0 5.9e-05 0.028 31 102 .. 53 125 .. 37 126 .. 0.74 Alignments for each domain: == domain 1 score: 14.1 bits; conditional E-value: 5.9e-05 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC....EEEEE-STTTTSTTS-EEEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle....vevvasdvleeveekkfdliv 102 + +kvl lG+G+Gv g+ala+ ++ ++d r l++ ++n+ean+ ++v d +++ ++ +d+++ sp|A7IQW5|MT21_CAEEL 53 EGKKVLELGSGTGVGGIALAALGADV--IITDLPER-LALIEKNVEANRKLtgnrIKVQVLDWTKDRIPEGLDMVL 125 5689******************9995..55555443.666677777665433445777777877777777787775 PP >> tr|Q20308|Q20308_CAEEL Amine N-MethylTransferase OS=Caenorhabditis elegans OX=6239 GN=anmt-2 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 10.7 0.0 0.00065 0.31 20 73 .. 59 111 .. 38 130 .. 0.85 2 ? 1.0 0.0 0.63 3e+02 77 135 .. 155 213 .. 138 220 .. 0.73 Alignments for each domain: == domain 1 score: 10.7 bits; conditional E-value: 0.00065 HHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHH CS MTS 20 sklLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesake 73 ++l+l+t+ ++++++lD+G+G v +a + + + +v+l d r l++ ++ tr|Q20308|Q20308_CAEEL 59 AQLMLQTMRPSERETLLDIGAGPTVYSALCFRDVAK-RVHLSDFVDRNLDVLRK 111 6899*****99999*************999998877.68888877777776666 PP == domain 2 score: 1.0 bits; conditional E-value: 0.63 HTTGC.EEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHHHHHHHHHHHHHEEEEEEE CS MTS 77 ankle.vevvasdvleeveekkfdlivsNPPfhagkatelavaeeliaeAkeaLkegGeL 135 + +++ ++v++ dv+ e++ kk+d++vs + + +++ + +++ ++L++gG++ tr|Q20308|Q20308_CAEEL 155 SGGIHfADVHQMDVVPELAGKKVDILVSIFTLESACR-NYEEYCKCVTNMMRHLRSGGRF 213 5555668899999999999999999998655555555.6666667777777778877776 PP >> tr|K8ERZ6|K8ERZ6_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_F13D12.9 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.3 0.0 0.0001 0.05 23 84 .. 228 288 .. 224 308 .. 0.77 Alignments for each domain: == domain 1 score: 13.3 bits; conditional E-value: 0.0001 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEE CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevev 84 L+++l+ +++++vl +GcG+G+ ++ + ++s + t + ++++ le ++ + + +le+++ tr|K8ERZ6|K8ERZ6_CAEEL 228 LIDQLELKADDHVLEIGCGWGAAAIRAVQRSGC-KWTGITISKEQLEWGQKKVVEAGLEGRI 288 88999999999*************999998776.7888889999999888888888888444 PP >> sp|Q9XW42|ANM7_CAEEL Protein arginine N-methyltransferase 7 OS=Caenorhabditis elegans OX=6239 GN=prmt-7 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.1 0.0 0.00012 0.058 32 63 .. 65 95 .. 49 139 .. 0.81 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.00012 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEES CS MTS 32 sgkvlDlGcGaGvlgaalakespeaevtlvdv 63 + +vlD+G+G+G+l++++a+e + +vt+++v sp|Q9XW42|ANM7_CAEEL 65 KVHVLDIGTGTGLLSLMAAREGAD-KVTALEV 95 4469***************99888.6777765 PP >> tr|O18030|O18030_CAEEL DeHydrogenases, Short chain OS=Caenorhabditis elegans OX=6239 GN=dhs-4 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.5 0.0 0.00019 0.088 28 94 .. 34 103 .. 28 134 .. 0.82 2 ? -1.7 0.0 4.3 2.1e+03 24 55 .. 160 191 .. 154 236 .. 0.64 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.00019 HCC..TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTST CS MTS 28 pke..lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleanklevevvasdvleeve 94 pk+ ++kvl G+G+G+ + ++k+ + + + l d++ ++++ k+ ++ n+ e++ ++ ++ + + tr|O18030|O18030_CAEEL 34 PKKdlYRKKVLITGAGNGLGKLLAQKFAARGAtLILWDINLQSVDELKNEIRGNQGEAHSYEVNLCDPGK 103 5555567889999*****766666666555444999*********************9999999887655 PP == domain 2 score: -1.7 bits; conditional E-value: 4.3 HHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC CS MTS 24 letlpkelsgkvlDlGcGaGvlgaalakespe 55 l ++ k+ +g+++ +++ aG +g + ++ +++ tr|O18030|O18030_CAEEL 160 LPAMLKDNNGHIVTIASAAGKMGSSGLADYSS 191 55555667888888888888888765544433 PP >> tr|Q23195|Q23195_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_W06B4.2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.9 0.1 0.00014 0.068 22 82 .. 22 95 .. 16 117 .. 0.69 Alignments for each domain: == domain 1 score: 12.9 bits; conditional E-value: 0.00014 HHHHHCHCCTCSEEEEET-TT.SHHHHHHHHHTTC.EEEEEESB..HHHHHHHHHHHHHTTGC...........E CS MTS 22 lLletlpkelsgkvlDlGcGa.Gvlgaalakespeaevtlvdvd..arAlesakenleankle...........v 82 +L ++ + +++ vl +G+Ga Gv g++ ak +v ++d +Ale ++n+ean+++ tr|Q23195|Q23195_CAEEL 22 FLCSNQELIEDKLVLEIGAGAtGVCGLTTAKLGAA-NVWMTDHPklEAALETLQRNIEANGVAekcivtgldweS 95 55555555567779******65******9997766.899999862268*************99554443333333 PP >> tr|Q9N470|Q9N470_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_Y34B4A.7 PE=1 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.8 0.0 0.00015 0.072 31 95 .. 175 240 .. 161 245 .. 0.79 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 0.00015 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTT CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleevee 95 + +l +G G G l + l + +p++++t+v+ d + +a++ ++ + + ++++ d+l+ ++e tr|Q9N470|Q9N470_CAEEL 175 DGKAILEIGLGGGSLDMFLHQLNPKLNITVVELDPVVVGIARKWFNVVNDNtRRTITADGLKFIKE 240 56679***********************************99977765544466777777766665 PP >> sp|P41938|HCDH2_CAEEL Probable 3-hydroxyacyl-CoA dehydrogenase B0272.3 OS=Caenorhabditis elegans OX=6239 GN=B0272.3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.1 0.5 0.00012 0.059 41 90 .. 29 82 .. 16 118 .. 0.81 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.00012 TTSHHHHHHHHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STT CS MTS 41 GaGvlgaalakespeae..vtlvdvdarAlesakenleankle..vevvasdvl 90 GaG++g +a+ s +a+ vt+vd + Ale a++ ++++ + + +a d+ sp|P41938|HCDH2_CAEEL 29 GAGLMGSGIAQVSANAKlnVTVVDSNQSALEKAQQGIANSLKRvaKKKHADDAA 82 88999998888877766559***************9987655443444444444 PP >> sp|Q23270|TRM1_CAEEL tRNA (guanine(26)-N(2))-dimethyltransferase OS=Caenorhabditis elegans OX=6239 GN=trm-1 PE=1 SV= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.4 0.1 0.0002 0.096 32 96 .. 91 158 .. 83 201 .. 0.75 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.0002 CSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS CS MTS 32 sgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankle..vevvasdvleeveek 96 + ++lD + G+ ++ + ke p++ + + d + +A++s +en++ n++e ve++ d++ ++ e+ sp|Q23270|TRM1_CAEEL 91 KIRILDALSASGLRALRFSKEVPNVGfIMANDFSDNAVASIQENVKLNGVEdiVEAHFGDAVMTMMEH 158 45688988999999***********989999********************99999999988877743 PP >> sp|Q9TYP1|STRM1_CAEEL Sterol 4-C-methyltransferase strm-1 OS=Caenorhabditis elegans OX=6239 GN=strm-1 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 0.0003 0.14 26 91 .. 86 155 .. 62 168 .. 0.65 2 ? -1.4 0.0 3.4 1.6e+03 120 137 .. 180 197 .. 171 220 .. 0.79 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.0003 HCHCC....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTT CS MTS 26 tlpke....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvle 91 ++ ++ ++ + lD+GcG+G + + +a++ ++ t v + + e+ +e +++ +++ +++va d+ + sp|Q9TYP1|STRM1_CAEEL 86 HIAEKlelsENVHCLDIGCGIGGVMLDIADFGAKL--TGVTIAPNEAEIGNEKFANMGISdrCKIVAADCQK 155 55555443366779**************9999885..55555555555666666666666566777766655 PP == domain 2 score: -1.4 bits; conditional E-value: 3.4 HHHHHHHHHEEEEEEEEE CS MTS 120 eliaeAkeaLkegGeLli 137 ++++e +++Lk+gG++++ sp|Q9TYP1|STRM1_CAEEL 180 KVMKEIQRVLKPGGKFIV 197 566777888999998765 PP >> tr|B4E3X6|B4E3X6_CAEEL SPermiDine Synthase OS=Caenorhabditis elegans OX=6239 GN=spds-1 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.8 0.0 0.00015 0.074 25 103 .. 99 187 .. 78 217 .. 0.81 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 0.00015 HHCHCC...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.....EEEEE-STTTTST..TS-EEEE CS MTS 25 etlpke...lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.....vevvasdvleeve..ekkfdli 101 +lp ++vl +G G G + +++k+++ +vt++++d + +++ak+ l + ++++ d++e ++ +++fd+i tr|B4E3X6|B4E3X6_CAEEL 99 AHLPMFahpDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGfshpkLDLFCGDGFEFLKnhKNEFDVI 185 5555544445678999**************99999****************988766554445568888888877666334678888 PP EE CS MTS 102 vs 103 ++ tr|B4E3X6|B4E3X6_CAEEL 186 IT 187 86 PP >> sp|Q09522|DIM1_CAEEL Probable dimethyladenosine transferase OS=Caenorhabditis elegans OX=6239 GN=E02H1.1 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.4 0.0 0.0002 0.093 31 108 .. 50 126 .. 27 138 .. 0.85 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.0002 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE---ST CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkfdlivsNPPfh 108 ++++vl +G G+G l++++++ ++ v ++++d r ++ k+ + + l+ ++v dv++ fd+ v N P++ sp|Q09522|DIM1_CAEEL 50 ATDTVLEVGPGTGNLTVKMLEVAKT--VIACEIDPRMIAEVKKRVMGTPLQnkLQVNGGDVMKMEW-PFFDVCVANLPYQ 126 5678*****************8887..99**************99999988789999999987666.7899999998876 PP >> tr|Q18257|Q18257_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=C27F2.4 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.9 0.0 0.00029 0.14 26 75 .. 48 95 .. 38 122 .. 0.80 Alignments for each domain: == domain 1 score: 11.9 bits; conditional E-value: 0.00029 HCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHH CS MTS 26 tlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenl 75 +lp+ +sg +lD+GcG+G+ + +++++ + vdv+ le+a++ tr|Q18257|Q18257_CAEEL 48 ALPEGKSGFLLDIGCGTGMSSEVILDAGHM--FVGVDVSRPMLEIARQDE 95 677778999*********999999886665..899999999999998764 PP >> tr|Q21069|Q21069_CAEEL Uncharacterized protein OS=Caenorhabditis elegans OX=6239 GN=CELE_K01A11.2 PE=1 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 0.0003 0.14 29 104 .. 69 153 .. 55 184 .. 0.76 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.0003 CC....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHH.HHHHTTGC.....EEEEE-STTTTSTTS-EEEEEE- CS MTS 29 ke....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesake.nleankle.....vevvasdvleeveekkfdlivsN 104 ++ + ++vl lGcGa + ++ a + + ev + d +a +e+ + n+e+n ++ + +++v + ++ +kfd+i+s tr|Q21069|Q21069_CAEEL 69 ENqtlfAGKSVLELGCGAALPSILTAVHGAK-EVFAQDFNASVIEFFTLpNFEENPHSavvqgEAMGWEEVPNRLSGRKFDFILSS 153 5445555678********8887777776555.9***********98764377888777665544567999999999999***9985 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (169 nodes) Target sequences: 20008 (8229220 residues searched) Passed MSV filter: 564 (0.0281887); expected 400.2 (0.02) Passed bias filter: 480 (0.0239904); expected 400.2 (0.02) Passed Vit filter: 80 (0.0039984); expected 20.0 (0.001) Passed Fwd filter: 42 (0.00209916); expected 0.2 (1e-05) Initial search space (Z): 20008 [actual number of targets] Domain search space (domZ): 42 [number of targets reported over threshold] # CPU time: 0.17u 0.01s 00:00:00.18 Elapsed: 00:00:00.06 # Mc/sec: 23178.97 // [ok]