# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/MTS.hmm.txt # target sequence database: proteomes/Ciona_intestinalis.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: MTS [M=169] Accession: PF05175.13 Description: Methyltransferase small domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 5.3e-12 45.5 0.0 7.2e-12 45.1 0.0 1.3 1 tr|F6WB92|F6WB92_CIOIN methyltransferase-like protein 5 isof 5.8e-08 32.4 0.1 1.1e-07 31.5 0.1 1.4 1 tr|F6UK82|F6UK82_CIOIN Uncharacterized protein OS=Ciona inte 8.8e-08 31.8 0.0 1.2e-07 31.4 0.0 1.2 1 tr|H2XWY6|H2XWY6_CIOIN Uncharacterized protein OS=Ciona inte 2.3e-06 27.1 0.0 1.1e-05 25.0 0.0 1.8 1 tr|H2XYT3|H2XYT3_CIOIN tRNA (guanine-N(7)-)-methyltransferas 3.9e-06 26.4 0.1 7.2e-06 25.5 0.1 1.3 1 tr|F6X5I5|F6X5I5_CIOIN Uncharacterized protein OS=Ciona inte 5.3e-06 26.0 0.0 8.4e-06 25.3 0.0 1.3 1 tr|F6TPM4|F6TPM4_CIOIN Uncharacterized protein OS=Ciona inte 1.2e-05 24.9 0.1 0.047 13.1 0.0 2.4 2 tr|H2Y2K2|H2Y2K2_CIOIN methyltransferase-like protein 13 OS= 1.2e-05 24.8 0.1 1.4e-05 24.7 0.1 1.1 1 tr|L7N0T2|L7N0T2_CIOIN Uncharacterized protein OS=Ciona inte 1.3e-05 24.7 0.0 1.9e-05 24.2 0.0 1.3 1 tr|F6YWW0|F6YWW0_CIOIN Uncharacterized protein OS=Ciona inte 2.4e-05 23.8 0.0 3.1e-05 23.5 0.0 1.2 1 tr|F6RNA2|F6RNA2_CIOIN Williams-Beuren syndrome chromosomal 2.6e-05 23.8 0.0 3.4e-05 23.4 0.0 1.3 1 tr|H2XUU0|H2XUU0_CIOIN Uncharacterized protein OS=Ciona inte 2.8e-05 23.6 0.0 5.9e-05 22.6 0.0 1.5 1 tr|F6UIG7|F6UIG7_CIOIN Uncharacterized protein OS=Ciona inte 3.4e-05 23.4 0.0 5.8e-05 22.6 0.0 1.3 1 tr|H2Y1L1|H2Y1L1_CIOIN Uncharacterized protein OS=Ciona inte 3.7e-05 23.2 0.0 5.6e-05 22.7 0.0 1.3 1 tr|F6ZLL7|F6ZLL7_CIOIN Protein-lysine N-methyltransferase OS 4.7e-05 22.9 0.0 6.5e-05 22.4 0.0 1.2 1 tr|H2XT31|H2XT31_CIOIN uncharacterized protein LOC101242218 8.1e-05 22.1 0.1 0.00016 21.1 0.1 1.5 1 tr|F6TIA8|F6TIA8_CIOIN Uncharacterized protein OS=Ciona inte 9.4e-05 21.9 0.0 0.00026 20.5 0.0 1.7 1 tr|H2XLP1|H2XLP1_CIOIN Uncharacterized protein OS=Ciona inte 0.0002 20.8 0.1 0.0002 20.8 0.1 2.4 3 tr|F6UUI8|F6UUI8_CIOIN Uncharacterized protein OS=Ciona inte 0.00021 20.8 0.1 0.00044 19.7 0.1 1.6 1 tr|F6XXQ7|F6XXQ7_CIOIN uncharacterized protein LOC100175264 0.0003 20.3 0.0 0.00049 19.6 0.0 1.3 1 tr|H2Y0C0|H2Y0C0_CIOIN Uncharacterized protein OS=Ciona inte 0.0005 19.5 0.0 0.00088 18.8 0.0 1.4 1 tr|H2XNZ2|H2XNZ2_CIOIN Uncharacterized protein OS=Ciona inte 0.00055 19.4 0.0 0.0017 17.8 0.0 1.8 1 tr|F6UKV2|F6UKV2_CIOIN Uncharacterized protein OS=Ciona inte 0.00056 19.4 0.0 0.00093 18.7 0.0 1.3 1 tr|H2XKE6|H2XKE6_CIOIN Uncharacterized protein OS=Ciona inte 0.00064 19.2 0.0 0.0012 18.3 0.0 1.5 1 tr|F6XYB7|F6XYB7_CIOIN Methyltransferase-like protein OS=Cio 0.00089 18.7 0.1 0.0018 17.7 0.1 1.4 1 tr|F6UIA2|F6UIA2_CIOIN Protein arginine N-methyltransferase 0.001 18.5 0.0 0.0015 18.0 0.0 1.2 1 tr|F6VYQ8|F6VYQ8_CIOIN uncharacterized protein LOC100177375 0.0013 18.2 0.0 0.0026 17.2 0.0 1.6 1 tr|F6SN53|F6SN53_CIOIN Uncharacterized protein OS=Ciona inte 0.0015 18.0 0.0 0.0035 16.8 0.0 1.6 1 tr|H2XS53|H2XS53_CIOIN Uncharacterized protein OS=Ciona inte 0.002 17.6 0.0 0.0041 16.6 0.0 1.4 1 tr|H2Y3J5|H2Y3J5_CIOIN Uncharacterized protein OS=Ciona inte 0.0023 17.4 0.0 0.01 15.3 0.0 1.9 1 tr|H2XY27|H2XY27_CIOIN 2-methoxy-6-polyprenyl-1,4-benzoquino 0.0029 17.1 0.0 0.0045 16.4 0.0 1.3 1 tr|F6RK63|F6RK63_CIOIN uncharacterized protein LOC100185027 0.0036 16.8 0.0 0.0065 15.9 0.0 1.4 1 tr|F6ZIX6|F6ZIX6_CIOIN Uncharacterized protein OS=Ciona inte 0.0043 16.5 0.0 0.0063 16.0 0.0 1.3 1 tr|F6Q929|F6Q929_CIOIN uncharacterized protein LOC100181888 0.0052 16.3 0.0 0.011 15.2 0.0 1.5 1 tr|H2XY59|H2XY59_CIOIN Uncharacterized protein OS=Ciona inte 0.0056 16.1 0.1 0.015 14.7 0.1 1.7 1 tr|F7B383|F7B383_CIOIN Ubiquinone biosynthesis O-methyltrans 0.0076 15.7 0.0 0.026 14.0 0.0 1.8 1 tr|F6YXT8|F6YXT8_CIOIN mRNA cap guanine-N7 methyltransferase 0.0091 15.5 0.1 0.015 14.7 0.1 1.3 1 tr|H2XK62|H2XK62_CIOIN Histone-lysine N-methyltransferase, H ------ inclusion threshold ------ 0.011 15.2 0.0 0.017 14.6 0.0 1.3 1 tr|F6TSS8|F6TSS8_CIOIN Uncharacterized protein OS=Ciona inte 0.013 15.0 0.0 0.024 14.1 0.0 1.4 1 tr|F6UFY6|F6UFY6_CIOIN Uncharacterized protein OS=Ciona inte 0.014 14.8 0.1 0.028 13.9 0.1 1.4 1 tr|H2Y2K6|H2Y2K6_CIOIN Uncharacterized protein OS=Ciona inte 0.022 14.2 0.0 0.03 13.8 0.0 1.3 1 tr|F6V0S1|F6V0S1_CIOIN uncharacterized protein LOC100175793 0.023 14.2 0.0 0.031 13.7 0.0 1.2 1 tr|F6U6H9|F6U6H9_CIOIN Uncharacterized protein OS=Ciona inte 0.027 13.9 0.0 0.081 12.4 0.0 1.7 2 tr|I6L7H7|I6L7H7_CIOIN tRNA (guanine(37)-N1)-methyltransfera 0.031 13.7 0.0 0.078 12.4 0.0 1.6 1 sp|F7A355|TRM5_CIOIN tRNA (guanine(37)-N1)-methyltransfera 0.034 13.6 0.0 0.12 11.8 0.0 1.8 1 tr|F6RBS2|F6RBS2_CIOIN Uncharacterized protein OS=Ciona inte 0.036 13.5 0.1 1 8.8 0.0 2.7 3 tr|F6QVW6|F6QVW6_CIOIN Uncharacterized protein OS=Ciona inte 0.042 13.3 0.0 0.059 12.8 0.0 1.2 1 tr|F6TU78|F6TU78_CIOIN Uncharacterized protein OS=Ciona inte 0.048 13.1 0.0 0.087 12.3 0.0 1.4 1 tr|H2XVH5|H2XVH5_CIOIN Uncharacterized protein OS=Ciona inte 0.05 13.1 0.0 0.12 11.8 0.0 1.7 1 tr|F7AMD9|F7AMD9_CIOIN Uncharacterized protein OS=Ciona inte 0.079 12.4 0.0 0.13 11.7 0.0 1.3 1 tr|F7AGV8|F7AGV8_CIOIN Uncharacterized protein OS=Ciona inte 0.092 12.2 0.0 0.19 11.2 0.0 1.5 1 tr|F6PZV6|F6PZV6_CIOIN Uncharacterized protein OS=Ciona inte 0.092 12.2 0.0 0.16 11.4 0.0 1.4 1 tr|F6SVN8|F6SVN8_CIOIN Uncharacterized protein OS=Ciona inte 0.11 11.9 0.0 0.22 11.0 0.0 1.4 1 tr|F6SN27|F6SN27_CIOIN rRNA adenine N(6)-methyltransferase O 0.15 11.5 0.2 0.64 9.4 0.2 1.9 1 tr|F6TKR9|F6TKR9_CIOIN uncharacterized protein LOC100180278 Domain annotation for each sequence (and alignments): >> tr|F6WB92|F6WB92_CIOIN methyltransferase-like protein 5 isoform X4 OS=Ciona intestinalis OX=7719 GN=LOC100184601 PE= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.1 0.0 2.3e-14 7.2e-12 30 125 .. 43 147 .. 32 186 .. 0.81 Alignments for each domain: == domain 1 score: 45.1 bits; conditional E-value: 2.3e-14 C....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STT......TTSTTS-EEEEEE- CS MTS 30 e....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvl......eeveekkfdlivsN 104 + ++v DlGcG G+l++ + + +d+d Ale+ + n+ea +l+ ve+++ d+ + + k+fd++++N tr|F6WB92|F6WB92_CIOIN 43 QfgdiCGKNVCDLGCGCGILSIGSSLLGAN-HCLGIDIDEDALEIFQSNCEAYELNnvVECIQADIArfspsrNMILAKRFDTVLMN 128 444446789*************99887776.7999********************9999999999972222213344799******* PP --STTTCHCHHHHHHHHHHHH CS MTS 105 PPfhagkatelavaeeliaeA 125 PPf ++++ + + +e++++A tr|F6WB92|F6WB92_CIOIN 129 PPFGTKSN--KGIDMEFLHAA 147 ***77666..77777777655 PP >> tr|F6UK82|F6UK82_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.5 0.1 3.5e-10 1.1e-07 31 103 .. 268 341 .. 236 343 .. 0.85 Alignments for each domain: == domain 1 score: 31.5 bits; conditional E-value: 3.5e-10 TCSEEEEET-TTSHHHHHHHHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEEEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeae..vtlvdvdarAlesakenleankle.vevvasdvleeveekkfdlivs 103 +++ vlD+GcG+G+l++ +ak+ ++ v++ ++ ++A+++ +en +nk+ ++ ++v+ v+ k+d+i+s tr|F6UK82|F6UK82_CIOIN 268 KDKIVLDVGCGTGILSMFAAKAGAKHVyaVDMSEIAFQAMDIVRENDFNNKITvIKGCIEEVTLPVA--KVDIIIS 341 45669****************988865569999******************9988888888888887..9999997 PP >> tr|H2XWY6|H2XWY6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.4 0.0 3.7e-10 1.2e-07 14 149 .. 55 192 .. 47 219 .. 0.77 Alignments for each domain: == domain 1 score: 31.4 bits; conditional E-value: 3.7e-10 TS--HHHHHHHHHCHCC....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS CS MTS 14 dklDkGsklLletlpke....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveek 96 +++ ++++ Ll+ ++ e + ++lDl++G+G g al + + +++++++ + + a + +l v+vv+ +e++ tr|H2XWY6|H2XWY6_CIOIN 55 KGISQATSTLLRFISLEertrSDFSILDLASGTGRCGKALRDSGFKCIIDALEANEAMNQKASKKGIYRNLTVHVVTPTTKLPIEDE 141 5677788888887776644443445****************************9987666666666666678*************** PP -EEEEEE---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHH...H CS MTS 97 kfdlivsNPPfhagkatelavaeeliaeAkeaLkegGeLliVanrklgyesl...l 149 ++d+iv+ f + +++ e i++ ++Lk+gG +++ +++ ++e+ + tr|H2XWY6|H2XWY6_CIOIN 142 SYDVIVCTGGFSR-----THIQSECIKDVVRVLKPGGLFWFCVRNTKQAENFnkeV 192 *******877755.....55799***************998777777666553343 PP >> tr|H2XYT3|H2XYT3_CIOIN tRNA (guanine-N(7)-)-methyltransferase OS=Ciona intestinalis OX=7719 GN=LOC100180383 PE=3 SV= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.0 0.0 3.4e-08 1.1e-05 31 157 .. 70 211 .. 60 220 .. 0.70 Alignments for each domain: == domain 1 score: 25.0 bits; conditional E-value: 3.4e-08 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC................EEEEE-STTTTSTTS-EEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle................vevvasdvleeveekkfdli 101 ++ +vlD+GcG+G l +al k p++ +t +++ + + +e ++a +++ + + + +++ + kk ++ tr|H2XYT3|H2XYT3_CIOIN 70 RKVEVLDIGCGYGGLLIALSKLLPDTLITGMEIRVKVSDYVQERIQALRMAhvgtkefqnvacirtnAMKYLPNFFSKGQLKKTFIL 156 5668********************998888777665555555555555444444444444124222222222344444444555556 PP EE---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--E CS MTS 102 vsNPPfhagkatelavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnve 157 P f+++k++ v +l+ae + +L +gG L+ ++ l++++ + ++f+++ tr|H2XYT3|H2XYT3_CIOIN 157 FPDPHFKKQKHKWRIVSSTLLAEYAYILCQGGLLYTIT-DVLEVHEWMVKHFSEHP 211 678999999999999999***********999998876.57999999999998765 PP >> tr|F6X5I5|F6X5I5_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.5 0.1 2.3e-08 7.2e-06 30 103 .. 55 128 .. 45 130 .. 0.84 Alignments for each domain: == domain 1 score: 25.5 bits; conditional E-value: 2.3e-08 CTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE CS MTS 30 elsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkfdlivs 103 +++ vlD+G+G+G+l++ +a++ + +v +++++ A + ak+ +e n+l+ + v+++ + +++ ++k+d+ivs tr|F6X5I5|F6X5I5_CIOIN 55 LKDKVVLDVGAGTGILSCFCAQAGAK-KVYAIEASNIA-KQAKKVVELNGLSdqIVVMQCLLEDAFLPEKVDVIVS 128 466789****************9888.89999999998.7789999***9997677777777778889******97 PP >> tr|F6TPM4|F6TPM4_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.3 0.0 2.7e-08 8.4e-06 27 82 .. 152 215 .. 141 237 .. 0.75 Alignments for each domain: == domain 1 score: 25.3 bits; conditional E-value: 2.7e-08 CHCC...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.....E CS MTS 27 lpke...lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.....v 82 l+k+ + +k++ lG+G+G+ g++l+k+ ++++ t++dv+ + l + k n++ n le + tr|F6TPM4|F6TPM4_CIOIN 152 LSKQdflRGKKIIELGSGIGFTGIVLLKAVEQLSYTFTDVHPNVLSVLKSNVAINSLEnenvaI 215 55556767889*********************************************99654331 PP >> tr|H2Y2K2|H2Y2K2_CIOIN methyltransferase-like protein 13 OS=Ciona intestinalis OX=7719 GN=LOC100183174 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.1 0.0 0.00015 0.047 31 160 .. 47 178 .. 38 184 .. 0.76 2 ! 9.3 0.0 0.0023 0.72 27 94 .. 460 536 .. 451 541 .. 0.70 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.00015 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTT.TSTTS-EEEEEE---STT...TCHC CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvle.eveekkfdlivsNPPfha...gkat 113 ++++l +GcG+ +l+ ++ ++ + ++ +d++ ++ + +++ e++ dv++ ++e++++ +++ + a + a tr|H2Y2K2|H2Y2K2_CIOIN 47 PKDDILVIGCGNSILSEQMYNAGFN-KIMNIDISQTVIKQMRLKNKDKT-EMDWKVMDVTNmDFENGQYSVVLDKGTLDAmmsDDAG 131 3667999************998777.899*********99997554433.444444555442677899**99988776551115577 PP HHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--EEEE CS MTS 114 elavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnvevva 160 e++++e+++ e ++L++gG+ ++ + ++ +++ + f++++ ++ tr|H2Y2K2|H2Y2K2_CIOIN 132 EETTVEKMFDEIDRVLRTGGRYICFSLAQDHIVRKVVRYFSDHQYLV 178 889******************99988888888787788887777665 PP == domain 2 score: 9.3 bits; conditional E-value: 0.0023 CHCC.....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHH..HHHHHHHHHHHTTGC..EEEEE-STTTTST CS MTS 27 lpke.....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdar..Alesakenleankle..vevvasdvleeve 94 l + + ++l +G G G +++ +++ ++ ++t+v+ da A++ l++ e ++++ +d+++ ve tr|H2Y2K2|H2Y2K2_CIOIN 460 LASIiqnpsDKFRILVIGLGGGTMSLFMLHCFKQCNITAVELDASvaAVAKQWFGLSNDTYEsrINITVEDGIQYVE 536 4443333344556999********************99997766510555555566666666778888888877766 PP >> tr|L7N0T2|L7N0T2_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.7 0.1 4.4e-08 1.4e-05 32 81 .. 24 71 .. 13 79 .. 0.76 Alignments for each domain: == domain 1 score: 24.7 bits; conditional E-value: 4.4e-08 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC CS MTS 32 sgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle 81 + vlD+GcG+Gvl++ +ak+ +v ++ + ++ ak+ +eankl+ tr|L7N0T2|L7N0T2_CIOIN 24 GKVVLDVGCGTGVLSMFAAKAGAA-KVIGIECSS-IVDYAKKIVEANKLD 71 5669************99997766.566666654.478999999999988 PP >> tr|F6YWW0|F6YWW0_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.2 0.0 6e-08 1.9e-05 19 104 .. 61 144 .. 55 208 .. 0.81 Alignments for each domain: == domain 1 score: 24.2 bits; conditional E-value: 6e-08 HHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE- CS MTS 19 GsklLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsN 104 ++ lL e+ +k ++lDlG+G+G+ g++l k+ + e+t++d a+ l++a + ++++ ++++s+ +++ fdli+s tr|F6YWW0|F6YWW0_CIOIN 61 AATLLTEKQKK--VFNILDLGSGTGLGGVSLRKFGFQGEITALDGAAKMLQLAMAKNIYSDCNEHILTSNQPLPYPDDTFDLIISV 144 55566665555..335*************************************9999999999*********************85 PP >> tr|F6RNA2|F6RNA2_CIOIN Williams-Beuren syndrome chromosomal region 27 protein-like OS=Ciona intestinalis OX=7719 GN= # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.5 0.0 1e-07 3.1e-05 19 103 .. 46 132 .. 40 183 .. 0.90 Alignments for each domain: == domain 1 score: 23.5 bits; conditional E-value: 1e-07 HHHHHHHHCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 19 GsklLletlpke..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivs 103 ++++L + +++ ++ +vlD+++G+G+++ +l + + + +++ +d +a+ le ake + +l e++ d ++ ++d++++ tr|F6RNA2|F6RNA2_CIOIN 46 ATDMLKQVMSNFedENLQVLDVAAGTGLVADNLRALNFQGKIDGIDGSAKMLEKAKEKGNYRNLVEEFILPDKPLPYDDSSYDVVIC 132 677777777765446667*********************************************99********************98 PP >> tr|H2XUU0|H2XUU0_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.4 0.0 1.1e-07 3.4e-05 27 104 .. 36 111 .. 22 179 .. 0.78 Alignments for each domain: == domain 1 score: 23.4 bits; conditional E-value: 1.1e-07 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE- CS MTS 27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsN 104 + ++ k+lDlG+G+G+ g++l k+ + e+ ++d a+ l++a+e ++++ ++++s +++ fdli+s tr|H2XUU0|H2XUU0_CIOIN 36 EK--KRFKILDLGSGTGLGGVSLRKFGFQGEIIALDGAAEMLKVAREKQIYSNCNEHILTSTQPLPYPDDTFDLIISV 111 33..4557*******************************************************************985 PP >> tr|F6UIG7|F6UIG7_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.6 0.0 1.9e-07 5.9e-05 23 105 .. 149 231 .. 140 262 .. 0.76 Alignments for each domain: == domain 1 score: 22.6 bits; conditional E-value: 1.9e-07 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE-- CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkfdlivsNP 105 +l++ + +++ vlD+G+G G+l+ + ++ + +v +v+++++A + k+ ++ ++ + + v+ + e + ++k+d+i+s P tr|F6UIG7|F6UIG7_CIOIN 149 MLQNYINFRDKVVLDVGAGSGILSFFAMQAGAR-KVYAVEASTMAEHT-KKLVSCSQYAgrIVVIPGKIEEITLPEKVDVIISEP 231 444444447788*************99998877.8**********655.55555555554588888888888889********98 PP >> tr|H2Y1L1|H2Y1L1_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.6 0.0 1.9e-07 5.8e-05 35 139 .. 44 139 .. 27 153 .. 0.86 Alignments for each domain: == domain 1 score: 22.6 bits; conditional E-value: 1.9e-07 EEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHHHHH CS MTS 35 vlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleeveekkfdlivsNPPfhagkatelavaee 120 +lD+GcGaG + + ++ v vd + + le aken+ ++ +e +a+d+ ++ e ++d++vs g+at+ +e+ tr|H2Y1L1|H2Y1L1_CIOIN 44 LLDVGCGAGQATKLFCPYFKT--VLGVDPSLKQLETAKENCCFDHVTfTEGIAEDLPAANE--SVDVVVS------GSATHWYNVEA 120 79*******866555554444..999*******************9989999999988777..*****97......888888999** PP HHHHHHHHEEEEEEEEEEE CS MTS 121 liaeAkeaLkegGeLliVa 139 +++e +++Lk+gG+L++ tr|H2Y1L1|H2Y1L1_CIOIN 121 FLKETERVLKPGGTLVVLD 139 ***************9865 PP >> tr|F6ZLL7|F6ZLL7_CIOIN Protein-lysine N-methyltransferase OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.7 0.0 1.8e-07 5.6e-05 31 92 .. 64 126 .. 48 149 .. 0.81 Alignments for each domain: == domain 1 score: 22.7 bits; conditional E-value: 1.8e-07 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTT CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvlee 92 ++ ++lD+GcG+G+l +alak+ + +++ +d Al++a + +++++l ++ ++ d++ tr|F6ZLL7|F6ZLL7_CIOIN 64 KHSTILDVGCGNGLLLLALAKQGYT-NLVGLDYCQSALDLASAVFKKEGLGhvGSWLQVDLTIG 126 4667****************97766.89****************99999876666666666544 PP >> tr|H2XT31|H2XT31_CIOIN uncharacterized protein LOC101242218 isoform X1 OS=Ciona intestinalis OX=7719 GN=LOC101242218 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.4 0.0 2.1e-07 6.5e-05 34 148 .. 73 185 .. 54 206 .. 0.81 Alignments for each domain: == domain 1 score: 22.4 bits; conditional E-value: 2.1e-07 E...EEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHH CS MTS 34 k...vlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPfhagkatelav 117 + vlD+++G+G + +l ++ + +++ ++ +a+ e ak+ +l+ve+v+ + + +++++d+ivs f + +++ tr|H2XT31|H2XT31_CIOIN 73 EkfcVLDIASGTGNCAQTLRNNGFKWTIDGIEGNAAMNEKAKAKNLYRNLKVEYVTPNERMTYDDDSYDVIVSIGGFSR-----THI 154 13559*************************************99999999**********************9766654.....557 PP HHHHHHHHHHHEEEEEEEEEEEETTSCHHHH CS MTS 118 aeeliaeAkeaLkegGeLliVanrklgyesl 148 e i+e ++Lk+gG +++ +++ +es tr|H2XT31|H2XT31_CIOIN 155 QPECIKEVLRILKPGGLFWFSVRKSDAAESY 185 899999999********99988777666665 PP >> tr|F6TIA8|F6TIA8_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.1 0.1 5.3e-07 0.00016 33 100 .. 333 399 .. 320 422 .. 0.88 Alignments for each domain: == domain 1 score: 21.1 bits; conditional E-value: 5.3e-07 SEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEE CS MTS 33 gkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleeveekkfdl 100 + ++D+++G G +g++la+ p ++ lv+++ ++le a + +++ +l+ + ++++++ + ++ kfd+ tr|F6TIA8|F6TIA8_CIOIN 333 DVLVDFCSGGGHVGIVLAHLLPLCKIILVENKEESLERAMQRIQELNLKnIMIYQCNLDQFMK--KFDI 399 4579********************************************989999998877666..7765 PP >> tr|H2XLP1|H2XLP1_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 GN=LOC108950095 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.5 0.0 8.4e-07 0.00026 20 163 .. 52 191 .. 45 196 .. 0.69 Alignments for each domain: == domain 1 score: 20.5 bits; conditional E-value: 8.4e-07 HHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE- CS MTS 20 sklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdlivsN 104 ++++ +++++ ++ +vlDlG G+G ++ +l ++ + e++++d++++ l e+ ++ l+ ++ ++v++ + ++++ +d++ s tr|H2XLP1|H2XLP1_CIOIN 52 TEMFSKHITDFKNCQVLDLGGGTGKVSFNLRNRFHfKGEIDILDANMNMLyEAYQKDLNFRNILRHFVTETGNLPLADEMYDVVASA 138 344445555558889***************987652667********99845668999999999*******************9987 PP --STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--EEEEEES CS MTS 105 PPfhagkatelavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnvevvaktk 163 f ++ + + + +i ++ k G Ll+V++r e ++ ++nve ++++k tr|H2XLP1|H2XLP1_CIOIN 139 GAFIPNHI-SVTSIFGII----NVIKR-GGLLLVTRRLKTTEGYGQQFVENVEKLCSEK 191 66655544.222222222....33333.3355556555555555666666666666555 PP >> tr|F6UUI8|F6UUI8_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 GN=LOC100182889 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.2 0.3 7.8 2.4e+03 56 75 .. 125 144 .. 89 162 .. 0.55 2 ? -2.4 0.1 9.3 2.9e+03 59 85 .. 312 338 .. 304 356 .. 0.61 3 ! 20.8 0.1 6.6e-07 0.0002 30 88 .. 425 482 .. 412 494 .. 0.81 Alignments for each domain: == domain 1 score: -2.2 bits; conditional E-value: 7.8 .EEEEEESBHHHHHHHHHHH CS MTS 56 aevtlvdvdarAlesakenl 75 ++ + vd ++ +e k + tr|F6UUI8|F6UUI8_CIOIN 125 NKRENVDSSTSDVENKKIKV 144 22233333333333333333 PP == domain 2 score: -2.4 bits; conditional E-value: 9.3 EEEESBHHHHHHHHHHHHHTTGCEEEE CS MTS 59 tlvdvdarAlesakenleanklevevv 85 tl + ++ ++++k+nl+++k+++e+ tr|F6UUI8|F6UUI8_CIOIN 312 TLENSSMVIITMCKQNLTDEKIQTELQ 338 445556666788888888888875543 PP == domain 3 score: 20.8 bits; conditional E-value: 6.6e-07 CTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-S CS MTS 30 elsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasd 88 +++ +lD++cG+G +g++l + ++ ++ vd+ +A+ a +n++ n++ +e++ tr|F6UUI8|F6UUI8_CIOIN 425 SKETALLDVCCGTGTIGLTLSSCVNR--LVGVDICEQAIIDAVKNATLNNITnAEFYVGK 482 366779***************98888..9******************9999877777654 PP >> tr|F6XXQ7|F6XXQ7_CIOIN uncharacterized protein LOC100175264 OS=Ciona intestinalis OX=7719 GN=LOC100175264 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.7 0.1 1.4e-06 0.00044 30 107 .. 61 141 .. 48 196 .. 0.76 Alignments for each domain: == domain 1 score: 19.7 bits; conditional E-value: 1.4e-06 C.TCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---S CS MTS 30 e.lsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdlivsNPPf 107 + ++ vlDlG G+G+ + +l ++ + e++++d++ + l e++++ ++ ++ +++v++++ + ++ +d+i+s f tr|F6XXQ7|F6XXQ7_CIOIN 61 DsENFAVLDLGGGTGIAASNLRNHAGfKGELDILDASIHMLyEASQKDINLRNIICHAVTENGNLPLRDEMYDVIISSGAF 141 335556**********99999987762566*******88774788999****************************96555 PP >> tr|H2Y0C0|H2Y0C0_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.6 0.0 1.6e-06 0.00049 25 90 .. 102 168 .. 81 181 .. 0.79 Alignments for each domain: == domain 1 score: 19.6 bits; conditional E-value: 1.6e-06 HHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STT CS MTS 25 etlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvl 90 +l+ + v+D+ +G+G+ ++ l+ +s+ v++++ + ++++ k+nl nk+e +++++ d tr|H2Y0C0|H2Y0C0_CIOIN 102 ANLNC-DGEIVIDMFAGIGYFTLPLLVHSKARFVHACEWNPDSVTALKANLLLNKVEskCKIYEGDNR 168 45555.45569********************99************************77777777655 PP >> tr|H2XNZ2|H2XNZ2_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.8 0.0 2.8e-06 0.00088 35 138 .. 45 139 .. 25 166 .. 0.86 Alignments for each domain: == domain 1 score: 18.8 bits; conditional E-value: 2.8e-06 EEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHHHHH CS MTS 35 vlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleeveekkfdlivsNPPfhagkatelavaee 120 +lD+ cGaG + + ++ v vd + le aken+ ++ e va+d+ + +++d++v ag at+ +e+ tr|H2XNZ2|H2XNZ2_CIOIN 45 LLDVSCGAGQATKLFSPYFKT--VLGVDPSLPQLETAKENCYFDNVTfKEGVAEDLPVAK--ESVDMVV------AGAATHWFNVEA 121 79*******866555444444..999******************9997788888886655..5*****9......699999999*** PP HHHHHHHHEEEEEEEEEE CS MTS 121 liaeAkeaLkegGeLliV 138 +++e +++Lk+gG+L++ tr|H2XNZ2|H2XNZ2_CIOIN 122 FFKETERVLKPGGTLVVL 139 ***************986 PP >> tr|F6UKV2|F6UKV2_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.8 0.0 5.4e-06 0.0017 24 88 .. 146 207 .. 135 218 .. 0.81 Alignments for each domain: == domain 1 score: 17.8 bits; conditional E-value: 5.4e-06 HHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-S CS MTS 24 letlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasd 88 +etlp + +vlD+G+G+G+l++++a+ + + +v +++ +++ ++++e ++ n+l+ ++ + + tr|F6UKV2|F6UKV2_CIOIN 146 METLPC--DVHVLDIGSGTGLLSMMAAQLK-SCTVYACEMSKAMHTISEECISLNQLSHQIKTIN 207 455555..456************9999865.559*********99***********997776655 PP >> tr|H2XKE6|H2XKE6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 GN=LOC100176401 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.7 0.0 3e-06 0.00093 24 103 .. 59 138 .. 54 161 .. 0.83 Alignments for each domain: == domain 1 score: 18.7 bits; conditional E-value: 3e-06 HHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 24 letlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivs 103 le ++++++ k lD++cG+G+++ +l k + ++ +d +a le+ak ++l+ ++ + +e++ + +v+ tr|H2XKE6|H2XKE6_CIOIN 59 LELIQDQKNSKFLDIACGTGLVAQELRKSGFKGGIDGIDGSAGMLELAKPKNLYSQLKEAFIYPGIDMPFENNAYMGVVC 138 67788889999**************************************9888888887777777777777777776666 PP >> tr|F6XYB7|F6XYB7_CIOIN Methyltransferase-like protein OS=Ciona intestinalis OX=7719 GN=LOC100181090 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.3 0.0 3.9e-06 0.0012 27 92 .. 79 144 .. 75 191 .. 0.82 Alignments for each domain: == domain 1 score: 18.3 bits; conditional E-value: 3.9e-06 CHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTT CS MTS 27 lpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvlee 92 ++++++ +l GcG+G l ++ +++ v ++d + rA+e+ k n + ++ +++++++d+ + tr|F6XYB7|F6XYB7_CIOIN 79 IHNNQQTVLLEAGCGVGNAIFPLMAQAKDLFVYACDFSPRAVELVKDNPSYSETKCKAFQCDLGTD 144 566677778999*******************************************99999997543 PP >> tr|F6UIA2|F6UIA2_CIOIN Protein arginine N-methyltransferase OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.7 0.1 5.9e-06 0.0018 22 88 .. 61 128 .. 57 147 .. 0.81 Alignments for each domain: == domain 1 score: 17.7 bits; conditional E-value: 5.9e-06 HHHHHCHCC.TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-S CS MTS 22 lLletlpke.lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasd 88 l ++ ++k+ + kvlD+G+G+G+l++++a + e +t+++v ++a+ ++n++e ++++++ tr|F6UIA2|F6UIA2_CIOIN 61 LAVSEMHKRgKVAKVLDIGTGTGLLSMMAATAGAE-IITAIEVFSPMAKVAEMVTKENGFEkIQIINKH 128 56777888877789***************999988.599999988888999999999999987766554 PP >> tr|F6VYQ8|F6VYQ8_CIOIN uncharacterized protein LOC100177375 OS=Ciona intestinalis OX=7719 GN=LOC100177375 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.0 0.0 4.8e-06 0.0015 31 103 .. 79 151 .. 57 153 .. 0.74 Alignments for each domain: == domain 1 score: 18.0 bits; conditional E-value: 4.8e-06 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivs 103 +s +vlD+G+G+G +++al k + ++++d + l+ a+ +l ++++++ + + ++++v+ tr|F6VYQ8|F6VYQ8_CIOIN 79 KSFTVLDIGAGTGQMAIALSKIQYAGLIDALDGNSLMLKKAQSKNLYRNLTRHLLTTESPLPHDSNAYNVVVC 151 5667********************999***********99987655555555555555555555567777776 PP >> tr|F6SN53|F6SN53_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.2 0.0 8.4e-06 0.0026 18 64 .. 83 130 .. 73 179 .. 0.83 Alignments for each domain: == domain 1 score: 17.2 bits; conditional E-value: 8.4e-06 HHHHHHHHHCHCC...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESB CS MTS 18 kGsklLletlpke...lsgkvlDlGcGaGvlgaalakespeaevtlvdvd 64 ++ +L+++l ++ + ++v+ lG+G+G++g+a+a + vt++d + tr|F6SN53|F6SN53_CIOIN 83 EAATVLADYLADNydfRGRNVIELGAGTGLVGMAVAYLGGN--VTVTDLQ 130 578899****9999988999*****************9999..5666654 PP >> tr|H2XS53|H2XS53_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 0.0 1.1e-05 0.0035 29 137 .. 69 184 .. 63 203 .. 0.84 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 1.1e-05 CCTCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGC...........EEEEE-STTTTSTTS-EEEEEE CS MTS 29 kelsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankle...........vevvasdvleeveekkfdlivs 103 ++ + k+lDlG+G G alak e vt vd + l++a++ + ++ + ++++ + + +e+ ++d+++s tr|H2XS53|H2XS53_CIOIN 69 NNPTPKLLDLGSGSGRDCYALAKLVGEDGfVTGVDMTDEQLAVANKYIDYHQQSfgyskpntkfvKGFIEKLGEAGIEDTSMDIVIS 155 5667789****************9999878999999999999999888887777667777755644455666778899********* PP ---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEE CS MTS 104 NPPfhagkatelavaeeliaeAkeaLkegGeLli 137 N + k+ e++++eA ++Lk gGeL++ tr|H2XS53|H2XS53_CIOIN 156 NCVINLVKD-----KEAVLKEAYRVLKYGGELYF 184 **9999998.....7899*************985 PP >> tr|H2Y3J5|H2Y3J5_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.6 0.0 1.3e-05 0.0041 34 137 .. 42 143 .. 31 153 .. 0.75 Alignments for each domain: == domain 1 score: 16.6 bits; conditional E-value: 1.3e-05 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE-..--STTTCHCHHHHH CS MTS 34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsN..PPfhagkatelava 118 +lD+GcGaG + ++a s + v ++d + + l+ a+ + + + +a+++ v+++++d+i + ag+ ++ v tr|H2Y3J5|H2Y3J5_CIOIN 42 YLLDVGCGAGRSANVFAPYSHD--VLAIDPSENELKEARFLKQVHVTYKTGIAEEL--PVDDASVDVITAAsvDVITAGTSVHWFVR 124 589********99888887776..88888888888888765554443322222222..24467888886441156899********* PP HHHHHHHHHHEEEEEEEEE CS MTS 119 eeliaeAkeaLkegGeLli 137 e++++e ++Lk+gG+L++ tr|H2Y3J5|H2Y3J5_CIOIN 125 EKFFKEVDRVLKPGGRLVL 143 ****************986 PP >> tr|H2XY27|H2XY27_CIOIN 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial OS=Ciona intestinalis OX=7719 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.3 0.0 3.3e-05 0.01 23 139 .. 79 197 .. 76 216 .. 0.77 Alignments for each domain: == domain 1 score: 15.3 bits; conditional E-value: 3.3e-05 HHHHCHCCTCSEEEEET-TTSHHH......HHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTST.TS-EEEEE CS MTS 23 LletlpkelsgkvlDlGcGaGvlg......aalakespeaevtlvdvdarAlesakenleanklevevvasdvleeve.ekkfdliv 102 L++ l+ + k+lD + G+G ++ ++l++ +pe +vt++d++ + le+ k+ +e+++l+++ v +++ + ++f++ tr|H2XY27|H2XY27_CIOIN 79 LITVLNPCDKTKLLDCAGGTGDISfrfikrVKLQHDCPEPNVTVCDINPNMLEVGKRRAETQNLHLKWVCCSADDLCFpGASFNAYT 165 677788888899***********933322234556689999************************7777766666544256888888 PP E---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEE CS MTS 103 sNPPfhagkatelavaeeliaeAkeaLkegGeLliVa 139 +++ ++ ++++++eA ++L++gG++l+ tr|H2XY27|H2XY27_CIOIN 166 IAFGIRNCTH-----IDKVLKEAYRVLEPGGRFLCLE 197 7777777777.....8889999999999999988765 PP >> tr|F6RK63|F6RK63_CIOIN uncharacterized protein LOC100185027 OS=Ciona intestinalis OX=7719 GN=LOC100185027 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.4 0.0 1.5e-05 0.0045 29 103 .. 65 138 .. 48 162 .. 0.81 Alignments for each domain: == domain 1 score: 16.4 bits; conditional E-value: 1.5e-05 CCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 29 kelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivs 103 k ++ k+lDlG+G+G+ gaal ++ ++ ++d +a l++a e ++ ++++s+ ++++fd++vs tr|F6RK63|F6RK63_CIOIN 65 K-ENFKLLDLGAGTGLAGAALRRAGFLGNISALDGSAGMLKVAMEKGIYSDSTEHILTSSNPLPYSDHSFDMVVS 138 2.45579*******************99*************9988777777777777777777777799999997 PP >> tr|F6ZIX6|F6ZIX6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 GN=LOC100181209 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.9 0.0 2.1e-05 0.0065 31 104 .. 71 154 .. 60 183 .. 0.71 Alignments for each domain: == domain 1 score: 15.9 bits; conditional E-value: 2.1e-05 TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGC.......EEEEE-ST..TTTSTTS-EEEEEE- CS MTS 31 lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankle.......vevvasdv..leeveekkfdlivsN 104 + k+lDlGcG G ++ + e vt vd ++ l++a++ + +++ + v++v+ v ++e+e+ ++d+ +sN tr|F6ZIX6|F6ZIX6_CIOIN 71 EGVKILDLGCGSGRDCYVMSQLVGEDGyVTGVDMTKEQLDIARKYVDHHREKfgfkksnVKFVEGFVedMKEIEDSSIDIAISN 154 5668************999999988777****************9999988844444443333221122355667777777777 PP >> tr|F6Q929|F6Q929_CIOIN uncharacterized protein LOC100181888 OS=Ciona intestinalis OX=7719 GN=LOC100181888 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.0 0.0 2e-05 0.0063 29 104 .. 64 138 .. 48 177 .. 0.81 Alignments for each domain: == domain 1 score: 16.0 bits; conditional E-value: 2e-05 CCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE- CS MTS 29 kelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsN 104 k ++ k+lDlG+G+G+ gaal + ++ ++d +a+ l++a+e ++ ++++s+ ++++f+++vs tr|F6Q929|F6Q929_CIOIN 64 K-ENFKLLDLGAGTGLSGAALRRSGFLGNISALDGSAEMLKVATEKGIYSDSTEHILTSSNPLPYPDHSFEMVVSV 138 2.45579****************999999*************9988777777777777777777777999999875 PP >> tr|H2XY59|H2XY59_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 GN=LOC100178073 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.2 0.0 3.5e-05 0.011 31 146 .. 66 176 .. 54 193 .. 0.86 Alignments for each domain: == domain 1 score: 15.2 bits; conditional E-value: 3.5e-05 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---STTTCHCHHHH CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPfhagkatelav 117 ++ k+lDlG+G+G+ g+a+ ++ ++ ++d + l++a e +++ ++++s+ ++++fd++ f g t +++ tr|H2XY59|H2XY59_CIOIN 66 KNFKLLDLGAGTGLSGVAFRSAGFLGNMSALDGSEGMLKVAMEKGIYSDVTEHILTSSNPLPYPDQSFDMV-----FNVGAFTIHNI 147 45579****************999999***************99999999999999999999999*****9.....7899999999* PP HHHHHHHHHHHEEEEEEEEEEEETTSCHH CS MTS 118 aeeliaeAkeaLkegGeLliVanrklgye 146 + i++A ++Lk++ L+ ++ + ++ tr|H2XY59|H2XY59_CIOIN 148 EPDCIEDALRVLKPNSYLVTTVRMHCYMQ 176 **************999988777776555 PP >> tr|F7B383|F7B383_CIOIN Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Ciona intestinalis OX=7719 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.7 0.1 4.9e-05 0.015 34 137 .. 109 209 .. 101 229 .. 0.68 Alignments for each domain: == domain 1 score: 14.7 bits; conditional E-value: 4.9e-05 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTST..TS-EEEEEE---STTTCHCHHH CS MTS 34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeve..ekkfdlivsNPPfhagkatela 116 k+l +GcGaGvl la+ + v +d++ + le+ak n ++++ d+ + v +f ++v + ++ + tr|F7B383|F7B383_CIOIN 109 KILEVGCGAGVLCEPLARLGAS--VLGIDASDNVLEVAKIHRDGNTELsdLQYIDADLEDIVGagTLRFHAVVAS-----EVVEHVE 188 79****************9888..899999999999999877766533356666666655554112455555543.....2223333 PP HHHHHHHHHHHHEEEEEEEEE CS MTS 117 vaeeliaeAkeaLkegGeLli 137 +++i++ + L ++G+L++ tr|F7B383|F7B383_CIOIN 189 DKTKFINNCCSLLMPNGSLFL 209 456677777777777777665 PP >> tr|F6YXT8|F6YXT8_CIOIN mRNA cap guanine-N7 methyltransferase OS=Ciona intestinalis OX=7719 GN=LOC100184027 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.0 0.0 8.5e-05 0.026 34 136 .. 94 209 .. 75 225 .. 0.72 Alignments for each domain: == domain 1 score: 14.0 bits; conditional E-value: 8.5e-05 EEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.............EEEEE-STTTTSTTS-EEEEEE---S CS MTS 34 kvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.............vevvasdvleeveekkfdlivsNPPf 107 vlDlGcG G ++ k+ p+ +++++d ++ +ke ++ k + ++ ++++ e++e+ ++ + ++ f tr|F6YXT8|F6YXT8_CIOIN 94 VVLDLGCGKGGDVLKWDKARPR-HLVCTDLAETSVSQCKERYALLKRRnrnrqffsaefivADSSTENLKEKLEDTNLMFDITSCQF 179 59*********99********9.7***********9999876543332233456664343333444556666666666566666666 PP TTTC.HCHHHHHHHHHHHHHHHEEEEEEEE CS MTS 108 hagk.atelavaeeliaeAkeaLkegGeLl 136 + ++++ ae+++++A + LkegG ++ tr|F6YXT8|F6YXT8_CIOIN 180 VVHYtFESEDKAETMVKNACNNLKEGGYFF 209 665523467788999999999999999775 PP >> tr|H2XK62|H2XK62_CIOIN Histone-lysine N-methyltransferase, H3 lysine-79 specific OS=Ciona intestinalis OX=7719 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.7 0.1 5e-05 0.015 8 54 .. 137 182 .. 135 191 .. 0.87 Alignments for each domain: == domain 1 score: 14.7 bits; conditional E-value: 5e-05 TTSTTTTS--HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT CS MTS 8 pgvFskdklDkGsklLletlpkelsgkvlDlGcGaGvlgaalakesp 54 p v+ ++++D s++L e l+ + ++ lDlG+G+G + +++a++sp tr|H2XK62|H2XK62_CIOIN 137 PEVYGETSFDLISQMLCE-LKLKDDDVFLDLGSGVGQVVLQVAAASP 182 789***********9997.555567789***************9988 PP >> tr|F6TSS8|F6TSS8_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.6 0.0 5.4e-05 0.017 30 137 .. 59 169 .. 37 182 .. 0.78 Alignments for each domain: == domain 1 score: 14.6 bits; conditional E-value: 5.4e-05 C.....TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTST..TS-EEEEEE---STT CS MTS 30 e.....lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeve..ekkfdlivsNPPfha 109 + +++lD G+G+G ++ +l+ + +v+l + + + le a++ l + +v + + +l++++ ek++dli + tr|F6TSS8|F6TSS8_CIOIN 59 GpgarvKPNRALDCGAGIGRVAKHLLLPIFK-TVDLAELNSNFLEQARTYLGDASSRVGNYYCCGLQDLKlkEKSYDLIWVQ--WVT 142 43444455679**************997777.6**********************9977777777777655599*****986..455 PP TCHCHHHHHHHHHHHHHHHEEEEEEEEE CS MTS 110 gkatelavaeeliaeAkeaLkegGeLli 137 g+ ++a ++++e k+aL++gG ++i tr|F6TSS8|F6TSS8_CIOIN 143 GHL-TDAHFVTFLNECKSALRKGGLIII 169 555.667778899999999999996655 PP >> tr|F6UFY6|F6UFY6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 14.1 0.0 7.9e-05 0.024 48 105 .. 316 376 .. 309 383 .. 0.86 Alignments for each domain: == domain 1 score: 14.1 bits; conditional E-value: 7.9e-05 HHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTST..TS-EEEEEE-- CS MTS 48 alakespeaevtlvdvdarAlesakenleankle.vevvasdvleeve..ekkfdlivsNP 105 ++ +++p+ +v+lvd+++ +++ a+en+++ ++ ++++a ++++ + +d+i NP tr|F6UFY6|F6UFY6_CIOIN 316 SMHRFQPRFHVVLVDNSHDSVQRAEENFKTFVFDeTKFTAVTAYQNHRvkHVCLDAIFINP 376 578899***************************9999999999988662155579999999 PP >> tr|H2Y2K6|H2Y2K6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 GN=LOC100177275 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.9 0.1 9e-05 0.028 32 81 .. 170 220 .. 160 241 .. 0.84 Alignments for each domain: == domain 1 score: 13.9 bits; conditional E-value: 9e-05 CSEEEEET-T.TSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC CS MTS 32 sgkvlDlGcG.aGvlgaalakespeaevtlvdvdarAlesakenleankle 81 ++vl +GcG +G+l +ak++ ++vt+vd+d le+ak+ +a ++ tr|H2Y2K6|H2Y2K6_CIOIN 170 GHHVLIFGCGpIGILCGLVAKHYGATQVTIVDIDQDRLEVAKKLGAADVVH 220 567999****88*****************************9876666655 PP >> tr|F6V0S1|F6V0S1_CIOIN uncharacterized protein LOC100175793 OS=Ciona intestinalis OX=7719 GN=LOC100175793 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.8 0.0 9.6e-05 0.03 31 103 .. 66 138 .. 26 168 .. 0.85 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 9.6e-05 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivs 103 ++ k+lDlG+G+G+ g+al ++ ++ ++d + l++a e +++ ++++s+ +++ fd++v tr|F6V0S1|F6V0S1_CIOIN 66 EHFKLLDLGAGTGLSGVALRRAGFPGKISALDGSPGMLKLAMEKSIYSDATEHLLTSSNPLPYPDQAFDMVVN 138 34479*****************9999*************9998888888887777777777777799999985 PP >> tr|F6U6H9|F6U6H9_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.7 0.0 0.0001 0.031 31 107 .. 30 106 .. 10 125 .. 0.80 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 0.0001 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---S CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPf 107 ++ k+lDlG+G+G+ g+al ++ ++ ++d + l++a e + ++ ++++s+ ++++fd++vs f tr|F6U6H9|F6U6H9_CIOIN 30 EHFKLLDLGTGTGISGVALRRAGFLGDISALDGSPGMLKLAMEKGTYSDETEHLLTSSNPLPYPDQSFDMVVSVSSF 106 34479*****************99999************99888877777777777777777888******986555 PP >> tr|I6L7H7|I6L7H7_CIOIN tRNA (guanine(37)-N1)-methyltransferase OS=Ciona intestinalis OX=7719 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.3 0.0 8.3 2.6e+03 130 150 .. 204 224 .. 181 238 .. 0.58 2 ? 12.4 0.0 0.00026 0.081 31 107 .. 274 348 .. 255 374 .. 0.85 Alignments for each domain: == domain 1 score: -2.3 bits; conditional E-value: 8.3 EEEEEEEEEEETTSCHHHHHH CS MTS 130 kegGeLliVanrklgyeslle 150 ++ + + V+n++++++++ + tr|I6L7H7|I6L7H7_CIOIN 204 DKIQTARTVVNKHQNIDNKFR 224 444445567777766666543 PP == domain 2 score: 12.4 bits; conditional E-value: 0.00026 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---S CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPf 107 +s+ v D+ +G+G+ ++ +ak+ v + d + ++ + +n++ nk ++++++sd+ e ++ + +++++ P tr|I6L7H7|I6L7H7_CIOIN 274 ESDVVFDVFAGVGPFAIPIAKKGCV--VYANDLNPESYRWLLHNVALNKTKAKCFNSDGREFIQTELRNYLLTRSPH 348 466799***************8777..9*******************************999997777777776665 PP >> sp|F7A355|TRM5_CIOIN tRNA (guanine(37)-N1)-methyltransferase OS=Ciona intestinalis OX=7719 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.4 0.0 0.00025 0.078 31 107 .. 255 329 .. 236 355 .. 0.85 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.00025 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---S CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPf 107 +s+ v D+ +G+G+ ++ +ak+ v + d + ++ + +n++ nk ++++++sd+ e ++ + +++++ P sp|F7A355|TRM5_CIOIN 255 ESDVVFDVFAGVGPFAIPIAKKGCV--VYANDLNPESYRWLLHNVALNKTKAKCFNSDGREFIQTELRNYLLTRSPH 329 466799***************8777..9*******************************999997777777776665 PP >> tr|F6RBS2|F6RBS2_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 0.00039 0.12 23 135 .. 30 136 .. 26 142 .. 0.72 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.00039 HHHHCHCC...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EEEEEE-- CS MTS 23 Lletlpke...lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleeveekkfdlivsNP 105 ++++ ++ s + +D+GcG G + +a ++ v ++d + + le a+ + +++ e +a+++ +ve+ ++dl+v tr|F6RBS2|F6RBS2_CIOIN 30 VVNKMRSKnktDSSEKVDVGCGSGQATNIFAPYFKK--VLATDPSVNQLEHARMQNKFDNVSyEEGTAENI--KVEDCSLDLLVA-- 110 5666665555566779*********99999998888..99************9988888887444444444..345567888774.. PP -STTTCHCHHHHHHHHHHHHHHHEEEEEEE CS MTS 106 PfhagkatelavaeeliaeAkeaLkegGeL 135 g a + ++++eA ++Lk+gG + tr|F6RBS2|F6RBS2_CIOIN 111 ----GCALPYFDHPKFLQEADRVLKPGGYM 136 ....44555555566777777777777766 PP >> tr|F6QVW6|F6QVW6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 8.8 0.0 0.0033 1 23 73 .. 9 59 .. 4 72 .. 0.88 2 ? -0.9 0.0 3.2 9.8e+02 78 102 .. 128 152 .. 123 192 .. 0.78 3 ? 0.8 0.0 0.93 2.9e+02 122 156 .. 229 262 .. 219 269 .. 0.77 Alignments for each domain: == domain 1 score: 8.8 bits; conditional E-value: 0.0033 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHH CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesake 73 L++ l+ ++ + ++D+ GaG + + +++++ +v ++d d +A e+a+ tr|F6QVW6|F6QVW6_CIOIN 9 LVSGLNIKRGDVIIDMTFGAGGHTKFIMENYKHCKVIALDRDEKAFEIAQD 59 677788878889***********************************9986 PP == domain 2 score: -0.9 bits; conditional E-value: 3.2 TTGCEEEEE-STTTTSTTS-EEEEE CS MTS 78 nklevevvasdvleeveekkfdliv 102 n+ e++++a dv+++++e+++ i+ tr|F6QVW6|F6QVW6_CIOIN 128 NRSEGQITAADVVNNLDEEELTEII 152 6667788888888888877776665 PP == domain 3 score: 0.8 bits; conditional E-value: 0.93 HHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS-- CS MTS 122 iaeAkeaLkegGeLliVanrklgyeslleelfgnv 156 i++++++L +gG++ +++ + l+ ++++++++++ tr|F6QVW6|F6QVW6_CIOIN 229 IKTSEKYLMNGGKMGVITFHSLED-RVVKRMLKQI 262 78999*********9999888764.4456666555 PP >> tr|F6TU78|F6TU78_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.8 0.0 0.00019 0.059 76 137 .. 56 119 .. 36 138 .. 0.81 Alignments for each domain: == domain 1 score: 12.8 bits; conditional E-value: 0.00019 HHTTGCEEEEE-STTTTSTTS-EEEEEE---STTTC...HCHHHHHHHHHHHHHHHEEEEEEEEE CS MTS 76 eanklevevvasdvleeveekkfdlivsNPPfhagk...atelavaeeliaeAkeaLkegGeLli 137 n+++++ +++++ e ++ kkf+ i+ N P k ++ ++ ++++ +Ake+L++ G++ + tr|F6TU78|F6TU78_CIOIN 56 VLNGVDATKLHQNLSEFLP-KKFEKIIFNFPHTGRKasiRKNRELLRNFFLSAKEVLDQWGKIEV 119 5688888889999988888.***********754442224678899***************9876 PP >> tr|H2XVH5|H2XVH5_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.3 0.0 0.00028 0.087 35 137 .. 8 101 .. 1 108 [. 0.73 Alignments for each domain: == domain 1 score: 12.3 bits; conditional E-value: 0.00028 EEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTST..TS-EEEEEE---STTTCHCHHHHHH CS MTS 35 vlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeve..ekkfdlivsNPPfhagkatelavae 119 +lD+GcG G +a + + ev ++d + + ++ a+ + ++ + e+++ + ++d+i+ +h + tr|H2XVH5|H2XVH5_CIOIN 8 LLDVGCGGGQSVNIFAP-YFH-EVLAIDPSENQIKEARSQNKFAHVTY---KAGFAEKLPcdDVSVDVIIAGASVHWFDR------Q 83 79*****9974444444.444.4999*****99999988766666653...33333333322567*****8777777666......9 PP HHHHHHHHHEEEEEEEEE CS MTS 120 eliaeAkeaLkegGeLli 137 ++ +eA ++Lk+gG+L++ tr|H2XVH5|H2XVH5_CIOIN 84 KFYEEADRVLKPGGRLVM 101 ****************97 PP >> tr|F7AMD9|F7AMD9_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 0.00039 0.12 21 102 .. 31 109 .. 23 165 .. 0.85 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.00039 HHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTT.TSTTS-EEEEE CS MTS 21 klLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvle.eveekkfdliv 102 ++L +++++ ++++l lGcG+ + + +l k + +++ +d ++ +e ++ +++ + e++ + d+++ ++ +++fdl++ tr|F7AMD9|F7AMD9_CIOIN 31 SVLKNHMNT--QDRILMLGCGNSPFSEHLYKDGYR-NIVNIDYSHICIEKMEAKCKDLA-EMKWLVMDIMDlKFGDASFDLVI 109 566666666..677***************998777.68889999999999998888766.57888888776356699999998 PP >> tr|F7AGV8|F7AGV8_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.7 0.0 0.00043 0.13 26 85 .. 142 202 .. 128 221 .. 0.79 Alignments for each domain: == domain 1 score: 11.7 bits; conditional E-value: 0.00043 HCHCCTCSEEEEET-TTSHHHHHHHHH.TTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEE CS MTS 26 tlpkelsgkvlDlGcGaGvlgaalake.speaevtlvdvdarAlesakenleanklevevv 85 +l+ ++v+ lG G l+a++ ++ sp+++v ++d + + +++ + +++n+++v+ tr|F7AGV8|F7AGV8_CIOIN 142 NLDLFCGKSVIELGGGSSSLAAMCIAFnSPSTRVLITDGNGKCVNMLNDAIHTNQMNVSNG 202 555556788************998665167888**********************985433 PP >> tr|F6PZV6|F6PZV6_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.2 0.0 0.00062 0.19 23 73 .. 149 198 .. 137 213 .. 0.70 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.00062 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHH CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesake 73 + + ++k + +v+D+G+G G l+ +la + ++ v +vd+ +++a++ tr|F6PZV6|F6PZV6_CIOIN 149 ISKSFSKGKCTRVIDIGSGQGHLSRVLALQ-HTLPVSAVDNVQSHIKAAEK 198 555666667778************988864.44467777776666666654 PP >> tr|F6SVN8|F6SVN8_CIOIN Uncharacterized protein OS=Ciona intestinalis OX=7719 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.4 0.0 0.00051 0.16 22 55 .. 92 125 .. 84 155 .. 0.83 Alignments for each domain: == domain 1 score: 11.4 bits; conditional E-value: 0.00051 HHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC CS MTS 22 lLletlpkelsgkvlDlGcGaGvlgaalakespe 55 L ++l+ +++ ++lD+G+G G+l+a +a++ + tr|F6SVN8|F6SVN8_CIOIN 92 ALHDQLTRSENPTALDVGSGSGYLTACFARMMGD 125 5667777778889**************9998765 PP >> tr|F6SN27|F6SN27_CIOIN rRNA adenine N(6)-methyltransferase OS=Ciona intestinalis OX=7719 GN=LOC100181797 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.0 0.0 0.0007 0.22 31 91 .. 70 129 .. 51 136 .. 0.89 Alignments for each domain: == domain 1 score: 11.0 bits; conditional E-value: 0.0007 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTT CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvle 91 + ++v +G G G+++ ++++++pe ++t+v++d+r l + k + ++ ++++v+ d+l+ tr|F6SN27|F6SN27_CIOIN 70 AGHHVCEVGPGPGPITRSILQRKPE-RLTVVEKDHRFLPMLKYVADVSNDRMTIVHGDILK 129 567899*******************.8***************9999999999999999875 PP >> tr|F6TKR9|F6TKR9_CIOIN uncharacterized protein LOC100180278 OS=Ciona intestinalis OX=7719 GN=LOC100180278 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.4 0.2 0.0021 0.64 25 90 .. 168 233 .. 165 306 .. 0.79 Alignments for each domain: == domain 1 score: 9.4 bits; conditional E-value: 0.0021 HHCHCCTCSEEEEET-T.TSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STT CS MTS 25 etlpkelsgkvlDlGcG.aGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvl 90 e+l+ + ++v+ +GcG +G+l++ +ak+ +ev +vd+ le++k ++ ++ ++ sd++ tr|F6TKR9|F6TKR9_CIOIN 168 EQLQV-AGERVVVIGCGpVGLLAVGCAKAMGATEVIAVDILDTRLEMSKMLGADYVVNSIIRGSDAV 233 55666.6678999****78********************9999999988776666666666666655 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (169 nodes) Target sequences: 16678 (5370518 residues searched) Passed MSV filter: 499 (0.0299197); expected 333.6 (0.02) Passed bias filter: 422 (0.0253028); expected 333.6 (0.02) Passed Vit filter: 85 (0.00509653); expected 16.7 (0.001) Passed Fwd filter: 54 (0.0032378); expected 0.2 (1e-05) Initial search space (Z): 16678 [actual number of targets] Domain search space (domZ): 54 [number of targets reported over threshold] # CPU time: 0.16u 0.01s 00:00:00.17 Elapsed: 00:00:00.06 # Mc/sec: 15126.96 // [ok]