# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/MTS.hmm.txt # target sequence database: proteomes/Ciona_savignyi.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: MTS [M=169] Accession: PF05175.13 Description: Methyltransferase small domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 3.5e-13 48.8 0.0 8.7e-10 37.8 0.0 2.1 2 tr|H2YG33|H2YG33_CIOSA Uncharacterized protein OS=Ciona savi 9.6e-12 44.1 0.0 1.5e-11 43.6 0.0 1.4 1 tr|H2ZQD2|H2ZQD2_CIOSA Uncharacterized protein OS=Ciona savi 1.4e-07 30.6 0.0 1.9e-07 30.1 0.0 1.2 1 tr|H2ZNR6|H2ZNR6_CIOSA Uncharacterized protein OS=Ciona savi 1e-06 27.8 0.0 1.3e-06 27.4 0.0 1.3 1 tr|H2ZNR4|H2ZNR4_CIOSA Uncharacterized protein OS=Ciona savi 2e-06 26.8 0.0 2.5e-06 26.5 0.0 1.2 1 tr|H2Z439|H2Z439_CIOSA Uncharacterized protein OS=Ciona savi 3.1e-06 26.2 0.0 4.4e-06 25.7 0.0 1.2 1 tr|H2ZNR9|H2ZNR9_CIOSA Uncharacterized protein OS=Ciona savi 3.9e-06 25.9 0.1 7.2e-06 25.0 0.1 1.4 1 tr|H2YHG7|H2YHG7_CIOSA Uncharacterized protein OS=Ciona savi 4e-06 25.9 0.0 5.3e-06 25.5 0.0 1.2 1 tr|H2YX31|H2YX31_CIOSA Uncharacterized protein OS=Ciona savi 4.1e-06 25.8 0.1 9.8e-06 24.6 0.0 1.6 2 tr|H2YNF4|H2YNF4_CIOSA Protein-lysine N-methyltransferase OS 1.5e-05 24.0 0.0 4.9e-05 22.3 0.0 1.8 1 tr|H2YSN6|H2YSN6_CIOSA tRNA (guanine-N(7)-)-methyltransferas 1.7e-05 23.8 0.0 3.4e-05 22.8 0.0 1.4 1 tr|H2Z161|H2Z161_CIOSA Uncharacterized protein OS=Ciona savi 2.4e-05 23.4 0.1 4e-05 22.6 0.1 1.3 1 tr|H2YX78|H2YX78_CIOSA Ubiquinone biosynthesis O-methyltrans 3.7e-05 22.7 0.0 7.5e-05 21.7 0.0 1.5 1 tr|H2Y5Z0|H2Y5Z0_CIOSA Uncharacterized protein OS=Ciona savi 4.4e-05 22.5 0.0 0.044 12.7 0.0 2.6 2 tr|H2YI45|H2YI45_CIOSA Uncharacterized protein OS=Ciona savi 6.3e-05 22.0 0.1 0.00011 21.1 0.1 1.3 1 tr|H2YWU1|H2YWU1_CIOSA Uncharacterized protein OS=Ciona savi 7.5e-05 21.7 0.2 0.00043 19.3 0.0 2.0 2 tr|H2YUE6|H2YUE6_CIOSA Uncharacterized protein OS=Ciona savi 0.00013 21.0 0.0 0.00016 20.7 0.0 1.1 1 tr|H2YX16|H2YX16_CIOSA Uncharacterized protein OS=Ciona savi 0.00024 20.1 0.0 0.00041 19.3 0.0 1.3 1 tr|H2Z8Q4|H2Z8Q4_CIOSA Uncharacterized protein OS=Ciona savi 0.00032 19.7 0.0 0.00047 19.1 0.0 1.3 1 tr|H2YJS4|H2YJS4_CIOSA Uncharacterized protein OS=Ciona savi 0.00046 19.2 0.0 0.00084 18.3 0.0 1.4 1 tr|H2YTR8|H2YTR8_CIOSA Methyltransferase-like protein OS=Cio 0.00054 18.9 0.1 0.0014 17.6 0.1 1.7 1 tr|H2Z6S3|H2Z6S3_CIOSA Uncharacterized protein OS=Ciona savi 0.0006 18.8 0.0 0.00086 18.3 0.0 1.4 1 tr|H2YPG7|H2YPG7_CIOSA Uncharacterized protein OS=Ciona savi 0.0012 17.9 0.0 0.0024 16.8 0.0 1.5 1 tr|H2Y5Z4|H2Y5Z4_CIOSA tRNA (guanine(37)-N1)-methyltransfera 0.0012 17.8 0.0 0.0025 16.8 0.0 1.5 1 tr|H2Y8E5|H2Y8E5_CIOSA Uncharacterized protein OS=Ciona savi 0.0022 17.0 0.0 0.0032 16.4 0.0 1.3 1 tr|H2YX11|H2YX11_CIOSA Uncharacterized protein OS=Ciona savi 0.0028 16.6 0.0 0.0046 15.9 0.0 1.6 1 tr|H2Z0R4|H2Z0R4_CIOSA Uncharacterized protein OS=Ciona savi 0.0038 16.2 0.0 0.0083 15.1 0.0 1.6 1 tr|H2YGP5|H2YGP5_CIOSA Uncharacterized protein OS=Ciona savi ------ inclusion threshold ------ 0.011 14.6 0.2 0.051 12.5 0.1 2.0 2 tr|H2Z072|H2Z072_CIOSA Uncharacterized protein OS=Ciona savi 0.015 14.3 0.0 0.022 13.7 0.0 1.2 1 tr|H2YPM5|H2YPM5_CIOSA Uncharacterized protein OS=Ciona savi 0.015 14.2 0.2 0.17 10.8 0.0 2.3 2 tr|H2Z203|H2Z203_CIOSA Uncharacterized protein OS=Ciona savi 0.016 14.1 0.0 0.062 12.2 0.0 1.9 2 tr|H2ZKD2|H2ZKD2_CIOSA Protein arginine N-methyltransferase 0.065 12.2 0.1 0.11 11.4 0.1 1.5 1 tr|H2YL80|H2YL80_CIOSA Uncharacterized protein OS=Ciona savi 0.087 11.8 0.0 0.15 11.0 0.0 1.4 1 tr|H2ZL66|H2ZL66_CIOSA Uncharacterized protein OS=Ciona savi 0.091 11.7 0.0 0.14 11.1 0.0 1.2 1 tr|H2YJS6|H2YJS6_CIOSA Uncharacterized protein OS=Ciona savi Domain annotation for each sequence (and alignments): >> tr|H2YG33|H2YG33_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.8 0.0 2.5e-12 8.7e-10 20 108 .. 33 132 .. 19 143 .. 0.84 2 ! 9.2 0.0 0.0016 0.54 114 158 .. 154 197 .. 148 205 .. 0.80 Alignments for each domain: == domain 1 score: 37.8 bits; conditional E-value: 2.5e-12 HHHHHHHCHCC.......TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTST...T CS MTS 20 sklLletlpke.......lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleanklevevvasdvleeve...e 95 + lLl++l+ke + +l +GcG Gv++a la + + ++d + A ++ e+ +an++ ++ v +d+ + e tr|H2YG33|H2YG33_CIOSA 33 TFLLLDALEKEqdylkalRPTIALEVGCGSGVVSAFLATILGDSTaYFCTDRNQSAASCCVETSAANHVTINPVLTDLSTSFLprfE 119 557888888876665543333489***************9999886899*********************99999998877643447 PP S-EEEEEE---ST CS MTS 96 kkfdlivsNPPfh 108 +++d+++ NPP+ tr|H2YG33|H2YG33_CIOSA 120 HSVDVLIFNPPYV 132 9**********86 PP == domain 2 score: 9.2 bits; conditional E-value: 0.0016 HHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--EE CS MTS 114 elavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnvev 158 +v+++++++ ++ L++ G L++V+ r+ + + ++e+f+++ tr|H2YG33|H2YG33_CIOSA 154 GRQVMNRFFKQVPNLLSNRGVLYLVVIRENKP-DEIREIFNEMGF 197 56899********************9998764.445888877655 PP >> tr|H2ZQD2|H2ZQD2_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 43.6 0.0 4.3e-14 1.5e-11 31 128 .. 48 150 .. 18 160 .. 0.81 Alignments for each domain: == domain 1 score: 43.6 bits; conditional E-value: 4.3e-14 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTT......TSTTS-EEEEEE---STT CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvle......eveekkfdlivsNPPfha 109 + v DlGcG G+l++ + vd+d++Al + n+e+ +le v++v+sdv++ + +k+fd++++NPPf + tr|H2ZQD2|H2ZQD2_CIOSA 48 VGKAVCDLGCGCGILSIGSSILGAS-YCLGVDIDKEALGIFLSNCEDYELEstVDCVHSDVVKlascrnVLRKKQFDTVIMNPPFGT 133 56789************99887777.5889*********************999******97622222134589***********77 PP TCHCHHHHHHHHHHHHHHH CS MTS 110 gkatelavaeeliaeAkea 128 +++ + + ++++++A + tr|H2ZQD2|H2ZQD2_CIOSA 134 KSN--KGIDMDFLKAASQL 150 666..88888888888764 PP >> tr|H2ZNR6|H2ZNR6_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.1 0.0 5.7e-10 1.9e-07 16 107 .. 48 141 .. 42 196 .. 0.79 Alignments for each domain: == domain 1 score: 30.1 bits; conditional E-value: 5.7e-10 --HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEE CS MTS 16 lDkGsklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdl 100 ++++++l+++++++s k+lD+G G+G+ + + ++ + + e++++d++ l +++++ ++ ++ ++v +++ v ++++d+ tr|H2ZNR6|H2ZNR6_CIOSA 48 CQMATNMFLKHVKDKTSSKILDFGGGTGISSFLIRNQLQfQGEIDIMDANIDMLyKASQKKIAFRNIIRHFVGKSGDLPVRDASYDV 134 5679************************999888766552566*******998846778899999999******************* PP EEE---S CS MTS 101 ivsNPPf 107 iv+ f tr|H2ZNR6|H2ZNR6_CIOSA 135 IVTTGAF 141 **96555 PP >> tr|H2ZNR4|H2ZNR4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.4 0.0 4e-09 1.3e-06 16 107 .. 48 141 .. 42 197 .. 0.77 Alignments for each domain: == domain 1 score: 27.4 bits; conditional E-value: 4e-09 --HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEE CS MTS 16 lDkGsklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdl 100 ++++++l+++++++s k+lD+G G+G+ + + ++ + + e++++d++ l +++++ + ++ ++v +++ v ++++d+ tr|H2ZNR4|H2ZNR4_CIOSA 48 CQMATNMFLKHVKDKTSSKLLDFGGGTGISSFLIRNQLQfQGEIDIMDANIDMLyKASQKKIGFRNIIRHFVGKSGDLPVRDESYDV 134 5679************************999888766552566*******998845678889999999******************* PP EEE---S CS MTS 101 ivsNPPf 107 iv+ f tr|H2ZNR4|H2ZNR4_CIOSA 135 IVTTGAF 141 **96555 PP >> tr|H2Z439|H2Z439_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.5 0.0 7.4e-09 2.5e-06 20 104 .. 16 102 .. 11 157 .. 0.88 Alignments for each domain: == domain 1 score: 26.5 bits; conditional E-value: 7.4e-09 HHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE- CS MTS 20 sklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdlivsN 104 ++++l++++++++ kvlDlG G+G ++ l ++ + + e++++d+++ l +++k+ + +++ ++ + ++ + ++ +d+iv+ tr|H2Z439|H2Z439_CIOSA 16 TDMFLKHVKDRTNTKVLDLGGGTGSVSQLLRNQLQfKGEIDILDANMDMLyKASKKEVGFSNILCHWIGDSGDLPLRDATYDVIVCA 102 7899***********************999876652667********99846778999999999*********************95 PP >> tr|H2ZNR9|H2ZNR9_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.7 0.0 1.3e-08 4.4e-06 18 157 .. 51 186 .. 44 198 .. 0.77 Alignments for each domain: == domain 1 score: 25.7 bits; conditional E-value: 1.3e-08 HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEE CS MTS 18 kGsklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdliv 102 ++++++ ++++++++ vlDlG G+G ++ + ++ + + e++++d++ + l +++++ + ++ ++v +++ v ++++d+i+ tr|H2ZNR9|H2ZNR9_CIOSA 51 AATNMFSKHVKDKINSVVLDLGGGTGTSSLFIRNQLQfQGEIDILDANIEMLyKASQKKIGFRNIIRHFVGKSGELPVRDESYDVII 137 6899999************************9887662567*******998846678889999999********************* PP E---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--E CS MTS 103 sNPPfhagkatelavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnve 157 s f ++ ++++ +i ++L++gG L+i ++r g + ee ++n+e tr|H2ZNR9|H2ZNR9_CIOSA 138 STGAFVPNHI-PASAIQGMI----KVLRPGG-LIIFTRRLEGLGDYGEEFVQNIE 186 9888876654.555666666....4677776.44555555555555555555555 PP >> tr|H2YHG7|H2YHG7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.0 0.1 2.1e-08 7.2e-06 31 103 .. 73 145 .. 62 147 .. 0.84 Alignments for each domain: == domain 1 score: 25.0 bits; conditional E-value: 2.1e-08 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkfdlivs 103 +++ vlD+G+G+G+l++ +a++ + +v +++++ A e ak+ +e+n+l+ v v+++ + +++ ++k+d+ivs tr|H2YHG7|H2YHG7_CIOSA 73 KDKVVLDVGAGTGILSCFCAQAGAR-KVYAIEASNIA-EQAKKVVETNGLSerVVVMQCILEDAFLPEKVDIIVS 145 56779****************9888.89999999998.889999******97666777777777889******97 PP >> tr|H2YX31|H2YX31_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.5 0.0 1.6e-08 5.3e-06 18 124 .. 51 158 .. 43 198 .. 0.77 Alignments for each domain: == domain 1 score: 25.5 bits; conditional E-value: 1.6e-08 HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEE CS MTS 18 kGsklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdliv 102 ++++++ ++++++++ vlDlG G+G ++ + ++ + + e++++d++ + l +++++ + ++ ++v +++ v ++++d+i+ tr|H2YX31|H2YX31_CIOSA 51 AATNMFSKHVKDKINSVVLDLGGGTGTSSLFIRNQLQfQGEIDILDANIEMLyKASQKKIGFRNIIRHFVGKSGELPVRDESYDVII 137 6899999************************9887662567*******998845678889999999********************* PP E---STTTCHCHHHHHHHHHHH CS MTS 103 sNPPfhagkatelavaeeliae 124 s f ++ ++++ +i++ tr|H2YX31|H2YX31_CIOSA 138 STGAFVPNHI-PASAIQGMIKA 158 9888876654.55666666654 PP >> tr|H2YNF4|H2YNF4_CIOSA Protein-lysine N-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.6 0.0 2.9e-08 9.8e-06 31 92 .. 59 121 .. 42 129 .. 0.84 2 ? -2.3 0.0 5.5 1.9e+03 95 106 .. 153 164 .. 139 187 .. 0.67 Alignments for each domain: == domain 1 score: 24.6 bits; conditional E-value: 2.9e-08 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTT CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvlee 92 ++ ++lD+GcG+G++ +alak + +++ +d Al++a + ++++++e ++ ++ d++++ tr|H2YNF4|H2YNF4_CIOSA 59 EDSRILDVGCGNGLMLLALAKLGYK-NLVGIDYCQSALDLASAVFRKENFEnvCNWIQMDLTSQ 121 5678*****************9888.79**********************98888888888776 PP == domain 2 score: -2.3 bits; conditional E-value: 5.5 TS-EEEEEE--- CS MTS 95 ekkfdlivsNPP 106 ++ +d+i NP tr|H2YNF4|H2YNF4_CIOSA 153 KGTYDAISLNPE 164 457888888884 PP >> tr|H2YSN6|H2YSN6_CIOSA tRNA (guanine-N(7)-)-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.3 0.0 1.4e-07 4.9e-05 30 147 .. 65 197 .. 58 214 .. 0.63 Alignments for each domain: == domain 1 score: 22.3 bits; conditional E-value: 1.4e-07 CTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC................EEEEE-STTTTSTTS-EEE CS MTS 30 elsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle................vevvasdvleeveekkfdl 100 ++ +vlD+GcG+G l +al k pe+ + +++ + e +e ++a + + + + + +++ + kk+ + tr|H2YSN6|H2YSN6_CIOSA 65 IRKVEVLDIGCGYGGLLIALSKLLPETLILGLEIRVKVSEYVQERIQALRKAdtenknfqnvacirtnAMKYLPNFFSKGQLKKMFI 151 45678********************97655555444333333332222111111122223422422222222234445555566777 PP EEE---STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHH CS MTS 101 ivsNPPfhagkatelavaeeliaeAkeaLkegGeLliVanrklgyes 147 + P f+++k++ v +l+ae + +L +gG+L+ ++ l++++ tr|H2YSN6|H2YSN6_CIOSA 152 LFPDPHFKKQKHKWRIVSPTLLAEYAYILCQGGSLYTITD-VLEVHE 197 7789999999999999999****************99864.455555 PP >> tr|H2Z161|H2Z161_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.0 1e-07 3.4e-05 23 105 .. 146 228 .. 139 259 .. 0.76 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 1e-07 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-STTTTSTTS-EEEEEE-- CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasdvleeveekkfdlivsNP 105 +l++ + +++ vlD+G+G G+l+ + ++ + +v +v+++++A + k ++ ++ + ++v+ + + + ++k+d+i+s P tr|H2Z161|H2Z161_CIOSA 146 MLQNYINFRDKVVLDVGAGSGILSFFAMQAGAR-KVYAVEASTMAEHTKK-LVSCSQYAgrISVIPGKIEDITLPEKVDVIISEP 228 444444447788*************99998877.8**********66555.555555544699999*99999999********99 PP >> tr|H2YX78|H2YX78_CIOSA Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Ciona savignyi OX=51511 PE=3 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.6 0.1 1.2e-07 4e-05 32 142 .. 113 220 .. 101 237 .. 0.75 Alignments for each domain: == domain 1 score: 22.6 bits; conditional E-value: 1.2e-07 CSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHH.TTGC.EEEEE-STTTTSTTS-EEEEEE---STTTCHCHH CS MTS 32 sgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenlea.nkle.vevvasdvleeveekkfdlivsNPPfhagkatel 115 k+l +GcGaGvl la+ ++ ++ d +A ++ + +++ ++l+ ++++ +d++ + + +fd++v + ++ tr|H2YX78|H2YX78_CIOSA 113 GVKILEVGCGAGVLCEPLARLGASVLgIDTSDGALAAAKMHRGDAADlSELQyIDATLEDIVGAGT-LRFDVVVAS-----EVVEHV 193 5589****************9998555666666666666666555441455589999999999888.9*****974.....555566 PP HHHHHHHHHHHHHEEEEEEEEEEEETT CS MTS 116 avaeeliaeAkeaLkegGeLliVanrk 142 + e++++ ++Lk++G+L++ + + tr|H2YX78|H2YX78_CIOSA 194 DNKAEFVTQCCDVLKPNGSLFLSTINR 220 7789****************9854433 PP >> tr|H2Y5Z0|H2Y5Z0_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.7 0.0 2.2e-07 7.5e-05 31 88 .. 130 189 .. 107 204 .. 0.83 Alignments for each domain: == domain 1 score: 21.7 bits; conditional E-value: 2.2e-07 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC..EEEEE-S CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle..vevvasd 88 + + v+Dl +G+G+ ++ l+ + + v++++ + A+++ ++n+++nk++ ++++ d tr|H2Y5Z0|H2Y5Z0_CIOSA 130 AGEVVVDLFAGIGYFTLPLLVHAKAEFVHACEWNPDAVDALTRNIHDNKVHlkCKIYFGD 189 46679****************999988**********************99666666555 PP >> tr|H2YI45|H2YI45_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.7 0.0 0.00013 0.044 25 149 .. 43 166 .. 38 181 .. 0.79 2 ! 6.8 0.0 0.0082 2.8 32 73 .. 483 524 .. 465 553 .. 0.76 Alignments for each domain: == domain 1 score: 12.7 bits; conditional E-value: 0.00013 HHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTT.TSTTS-EEEEEE---STTT CS MTS 25 etlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvle.eveekkfdlivsNPPfhag 110 +++++ ++++l +GcG+ l+ ++ ++ + ++t +d+++ ++ + n +a k e++ ++ dv++ ++++++ +++ + a tr|H2YI45|H2YI45_CIOSA 43 RYMKE--KDDILVIGCGNSDLSSQIYSAGFK-KLTNIDISKTVIKQMT-NRHADKQEMKWMEMDVTKmGFDDGHYSVVLDKGTLDAM 125 45555..66799*************998887.8********9999875.556666689******9983567999*****99999987 PP C..HCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHH CS MTS 111 k..atelavaeeliaeAkeaLkegGeLliVanrklgyesll 149 + + +++ ++ae ++L++gG+ ++++ + ++ +++ tr|H2YI45|H2YI45_CIOSA 126 MsdDSCDVTIDSMFAEIDRVLRTGGRYICITLAQDHVIRKI 166 732334567899**************999987666555554 PP == domain 2 score: 6.8 bits; conditional E-value: 0.0082 CSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHH CS MTS 32 sgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesake 73 + +vl +G G G l++ l++ p+ +vt+v+ d + ++a+e tr|H2YI45|H2YI45_CIOSA 483 EFRVLIIGLGGGTLSLYLLHCFPHCHVTAVELDPEIATVAQE 524 4469999************************99877666665 PP >> tr|H2YWU1|H2YWU1_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.1 0.1 3.3e-07 0.00011 31 99 .. 380 447 .. 369 466 .. 0.86 Alignments for each domain: == domain 1 score: 21.1 bits; conditional E-value: 3.3e-07 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTTSTTS-EE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.vevvasdvleeveekkfd 99 +++ ++D+++G G +g++la p+ +v lv+++ ++l+ a + +++ kl+ + ++++++ + + +fd tr|H2YWU1|H2YWU1_CIOSA 380 KDDVIVDFCSGGGHVGIVLAYLLPSCKVILVENKEESLDRAYQRIQTLKLKnIMLYQCNLDQFSK--DFD 447 45669*********************************************978888887765444..454 PP >> tr|H2YUE6|H2YUE6_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.3 0.0 1.3e-06 0.00043 19 92 .. 81 154 .. 69 162 .. 0.73 2 ? -0.0 0.0 1.1 3.6e+02 132 166 .. 198 238 .. 194 241 .. 0.80 Alignments for each domain: == domain 1 score: 19.3 bits; conditional E-value: 1.3e-06 HHHHHHHHCHCC...TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTT CS MTS 19 GsklLletlpke...lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvlee 92 ++++L++ + ++ + +kvl lG+G+G++g+++a + + vtl+d d+ l + +en+e n +++ ++++ + tr|H2YUE6|H2YUE6_CIOSA 81 AADVLANFMVEKydfHGKKVLELGSGTGLVGMVAAYMGAH--VTLTDLDKF-LPILEENIELNMNLIKTGSKNGTVK 154 4455555555555558999****************99988..778887764.6777777777776666666666555 PP == domain 2 score: -0.0 bits; conditional E-value: 1.1 EEEEEEEEETTSCHHHH......HHHHHS--EEEEEESSEE CS MTS 132 gGeLliVanrklgyesl......leelfgnvevvaktkkfk 166 gG i+ +kl+y+++ l+++f++v++v + +k + tr|H2YUE6|H2YUE6_CIOSA 198 GGGSKIILGSKLRYDRVevfilkLNQKFRTVKEVMRCEKTQ 238 5666678888999998888888899******9999877755 PP >> tr|H2YX16|H2YX16_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.7 0.0 4.5e-07 0.00016 25 103 .. 4 84 .. 1 97 [. 0.86 Alignments for each domain: == domain 1 score: 20.7 bits; conditional E-value: 4.5e-07 HHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 25 etlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdlivs 103 ++++++++ vlDlG G+G ++ + ++ + + e++++d++ + l +++++ + ++ ++v +++ v ++++d+i+s tr|H2YX16|H2YX16_CIOSA 4 KHVKDKINSVVLDLGGGTGTSSLFIRNQLQfQGEIDILDANIEMLyKASQKKIGFRNIIRHFVGKSGELPVRDESYDVIIS 84 6788889999**************9887662567*******9988456788899999999********************8 PP >> tr|H2Z8Q4|H2Z8Q4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.3 0.0 1.2e-06 0.00041 31 83 .. 66 116 .. 58 137 .. 0.71 Alignments for each domain: == domain 1 score: 19.3 bits; conditional E-value: 1.2e-06 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankleve 83 +++ vlD+GcG+Gvl++ +ak+ +v ++ + ++ ak+ + ankl+ + tr|H2Z8Q4|H2Z8Q4_CIOSA 66 RNKVVLDVGCGTGVLSMFAAKAGAA-KVIGIECSS-IVDYAKKIVVANKLDHS 116 45679*************9997765.555555543.36777777777777655 PP >> tr|H2YJS4|H2YJS4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.1 0.0 1.4e-06 0.00047 31 103 .. 79 151 .. 59 202 .. 0.89 Alignments for each domain: == domain 1 score: 19.1 bits; conditional E-value: 1.4e-06 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivs 103 +s ++lD+G+G+G +++al++ + e ++++d + l+ a+ l +++++d e +k+d++v+ tr|H2YJS4|H2YJS4_CIOSA 79 KSFTALDIGAGTGQMAIALKNIQYEGLIDALDGNSLMLKKAEGKGLYRTLTRHLLTTDSPLPYESNKYDAVVC 151 45569******************************************************************98 PP >> tr|H2YTR8|H2YTR8_CIOSA Methyltransferase-like protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.3 0.0 2.5e-06 0.00084 28 133 .. 75 182 .. 69 186 .. 0.73 Alignments for each domain: == domain 1 score: 18.3 bits; conditional E-value: 2.5e-06 HCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC.....EEEEE-STTTTSTTS-EEEEEE---STT CS MTS 28 pkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleankle.....vevvasdvleeveekkfdlivsNPPfha 109 +++++ +l GcG+G l ++++++ v ++d + rA++ k n +k + +++ ++++ ++++e+++dl+ + tr|H2YTR8|H2YTR8_CIOSA 75 KSNEHTVLLEAGCGVGNAIFPLMDKYSNLFVYACDFSPRAVQHVKDNPGFSKKNcnafqCDISTQSLCDNIQENSVDLVTL---IFV 158 55556668999**********************************996544444223447888888889999999999865...444 PP TCHCHHHHHHHHHHHHHHHEEEEE CS MTS 110 gkatelavaeeliaeAkeaLkegG 133 +a++ + e ++++ +++Lk+gG tr|H2YTR8|H2YTR8_CIOSA 159 LSAIHPNKFEFVFENIHKVLKPGG 182 445555555555555555555555 PP >> tr|H2Z6S3|H2Z6S3_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.6 0.1 4e-06 0.0014 20 102 .. 34 113 .. 27 177 .. 0.83 Alignments for each domain: == domain 1 score: 17.6 bits; conditional E-value: 4e-06 HHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTT.TSTTS-EEEEE CS MTS 20 sklLletlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvle.eveekkfdliv 102 ++L ++++k ++k+l lGcG+ + ++ l k + +vt vd ++ +e k+ +++ e++ + d+++ ++e fd+++ tr|H2Z6S3|H2Z6S3_CIOSA 34 KNVLKDHMDK--NDKILILGCGNSPFSLDLYKDGYK-NVTNVDYSTVCIENMKQKYQNLS-EMSWYVMDITNlQFEASTFDVVI 113 5788888988..667****************98777.7***************9987654.68888888876356677899988 PP >> tr|H2YPG7|H2YPG7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.3 0.0 2.5e-06 0.00086 25 104 .. 58 139 .. 53 198 .. 0.78 Alignments for each domain: == domain 1 score: 18.3 bits; conditional E-value: 2.5e-06 HHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHH.HHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE- CS MTS 25 etlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAl.esakenleanklevevvasdvleeveekkfdlivsN 104 ++++++++ kvlDlG G+G+++ l ++ + + e++++++++ l +++k+ + + + + v ++ + ++ +d+iv+ tr|H2YPG7|H2YPG7_CIOSA 58 KHVEDRINTKVLDLGGGTGLVSQFLRSQLQfKGEIDILNANMDMLyKASKKEVGYSTILRHWVGDSGDLPFRDATYDVIVCS 139 78888999***************99877652667*******99983566777777777788899999999999999999996 PP >> tr|H2Y5Z4|H2Y5Z4_CIOSA tRNA (guanine(37)-N1)-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 0.0 7.1e-06 0.0024 31 112 .. 253 332 .. 233 351 .. 0.87 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 7.1e-06 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE---STTTCH CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNPPfhagka 112 ++ +v D+ +G+G+ ++ +ak+ v + d + + + +n++ nk eve++++d+ + + ++ ++i++ fh+ + tr|H2Y5Z4|H2Y5Z4_CIOSA 253 RDATVFDVFAGVGPFAIPIAKKGCL--VYANDLNPDSYKWLVHNVKLNKTEVECFNCDGRDFIRDNLRNYILTSKTFHQVHV 332 45679****************8766..9*********************************************999999775 PP >> tr|H2Y8E5|H2Y8E5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.8 0.0 7.4e-06 0.0025 33 136 .. 72 182 .. 63 199 .. 0.81 Alignments for each domain: == domain 1 score: 16.8 bits; conditional E-value: 7.4e-06 SEEEEET-TTSHHHHHHHHHT.TC.EEEEEESBHHHHHHHHHHHHHTTGC...........EEEEE-STTTTSTTS-EEEEEE---S CS MTS 33 gkvlDlGcGaGvlgaalakes.peaevtlvdvdarAlesakenleankle...........vevvasdvleeveekkfdlivsNPPf 107 k+lDlG+G G alak p+ vt vd + l++a++ +e ++ ++++ + + ++++++d+i+sN + tr|H2Y8E5|H2Y8E5_CIOSA 72 MKLLDLGSGSGRDCFALAKLVgPDGFVTGVDMTDEQLAVANKHVEYHQKVfgfskpnvkfvKGYIEKLGDAGIADESVDIIISNCVI 158 579*********99999997626666999999999999999999888765566677733422233455678899***********99 PP TTTCHCHHHHHHHHHHHHHHHEEEEEEEE CS MTS 108 hagkatelavaeeliaeAkeaLkegGeLl 136 k+ e++++eA ++Lk gGeL+ tr|H2Y8E5|H2Y8E5_CIOSA 159 NLVKD-----KEAVLKEAYRVLKYGGELY 182 99998.....7899*************98 PP >> tr|H2YX11|H2YX11_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.4 0.0 9.3e-06 0.0032 18 71 .. 51 105 .. 43 131 .. 0.84 Alignments for each domain: == domain 1 score: 16.4 bits; conditional E-value: 9.3e-06 HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTT.C.EEEEEESBHHHHHHH CS MTS 18 kGsklLletlpkelsgkvlDlGcGaGvlgaalakesp.eaevtlvdvdarAlesa 71 ++++++ ++++++++ vlDlG G+G ++ + ++ + + e++++d++ + l a tr|H2YX11|H2YX11_CIOSA 51 AATNMFSKHVKDKINSVVLDLGGGTGTSSLFIRNQLQfQGELDILDANIEMLYKA 105 6899999***********************99887662556*****998877554 PP >> tr|H2Z0R4|H2Z0R4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.9 0.0 1.4e-05 0.0046 26 100 .. 54 127 .. 45 194 .. 0.82 Alignments for each domain: == domain 1 score: 15.9 bits; conditional E-value: 1.4e-05 HCHCCTCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEE CS MTS 26 tlpkelsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdl 100 ++++ + +vlD+++G+G++g l +++ + ++ +d +a+ le a+e +l e+v d ++++ +d+ tr|H2Z0R4|H2Z0R4_CIOSA 54 NFSD-DHLQVLDIAAGTGLMGELLRSANFKGVIDGIDGSANMLEKAREKGIYRNLIEEFVLPDKALPLKDQMYDV 127 3333.4446*************************************99877777777777777777777777776 PP >> tr|H2YGP5|H2YGP5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.1 0.0 2.4e-05 0.0083 31 89 .. 30 89 .. 12 141 .. 0.77 Alignments for each domain: == domain 1 score: 15.1 bits; conditional E-value: 2.4e-05 TCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGCEEEEE-ST CS MTS 31 lsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleanklevevvasdv 89 + kv+DlGcG G a+a+ e+ v vd ++ l++a++ e ++++ + +s+v tr|H2YGP5|H2YGP5_CIOSA 30 EGLKVVDLGCGSGRDCYAIAQLVGENGeVIGVDMTKEQLDIARKYEEYHRVKFGFKESNV 89 5568************999999887755*****************999999977766665 PP >> tr|H2Z072|H2Z072_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.5 0.1 0.00015 0.051 35 86 .. 254 305 .. 242 319 .. 0.87 2 ? -0.7 0.0 1.7 5.9e+02 119 147 .. 314 344 .. 307 353 .. 0.79 Alignments for each domain: == domain 1 score: 12.5 bits; conditional E-value: 0.00015 EEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE CS MTS 35 vlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevva 86 ++D+GcG +l+ +++++ + ++++v+ ++ak l+++ +++ v+ tr|H2Z072|H2Z072_CIOSA 254 IADFGCGEAMLASSVKNKVHSFDLVAVNDRVTVADIAKVPLADSSVDIVVFC 305 89**************************999999*******99999977664 PP == domain 2 score: -0.7 bits; conditional E-value: 1.7 HHHHHHHHHHEEEEEEEEE..EEETTSCHHH CS MTS 119 eeliaeAkeaLkegGeLli..Vanrklgyes 147 e++ eA+++Lk G L i Va+r+ g ++ tr|H2Z072|H2Z072_CIOSA 314 VEFLVEANRVLKLRGVLKIaeVASRFSGLKQ 344 578999*********9987667777777665 PP >> tr|H2YPM5|H2YPM5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.7 0.0 6.5e-05 0.022 33 102 .. 66 135 .. 54 146 .. 0.91 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 6.5e-05 SEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEE CS MTS 33 gkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenleanklevevvasdvleeveekkfdliv 102 k+lDl +G+G+ g+al + ++ ++d +++ l+ ak+ +++ ++v+++ ++++fdli+ tr|H2YPM5|H2YPM5_CIOSA 66 FKILDLSAGTGLGGVALRHVGFLGDIYALDGSKEMLKYAKNKHVYSEVTESIVTTSTPLPYNDNSFDLII 135 47***************99999999************************99999999999999*****98 PP >> tr|H2Z203|H2Z203_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.7 0.1 0.63 2.2e+02 135 164 .. 36 65 .. 27 67 .. 0.85 2 ? 10.8 0.0 0.0005 0.17 17 92 .. 201 278 .. 192 300 .. 0.82 Alignments for each domain: == domain 1 score: 0.7 bits; conditional E-value: 0.63 EEEEEETTSCHHHHHHHHHS--EEEEEESS CS MTS 135 LliVanrklgyeslleelfgnvevvaktkk 164 L + + l+y+ +lee++++++++++ k+ tr|H2Z203|H2Z203_CIOSA 36 LAALVMETLKYKVILEEILEQTKLLKQSKG 65 66667789***************9998775 PP == domain 2 score: 10.8 bits; conditional E-value: 0.0005 -HHHHHHHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.E.EEEEESBHHHHHHHHHHHHHTTGC.EEEEE-STTTT CS MTS 17 DkGsklLletlpkelsgkvlDlGcGaGvlgaalakespeae.vtlvdvdarAlesakenleankle.vevvasdvlee 92 Dk+s l + l+ + + +v+D ++ G + +la+ +++ + +vd d +++ ++ l++ +++ +e+++sd ++ tr|H2Z203|H2Z203_CIOSA 201 DKASCLSAFVLDPAPHTHVIDACAAPGNKTSHLAAIMNNTGkLFAVDRDRDRVKIMERQLQKANVQnCEIINSDFMKL 278 777777777888888899*********999999887666544********************99999*******9863 PP >> tr|H2ZKD2|H2ZKD2_CIOSA Protein arginine N-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.2 0.0 0.00018 0.062 31 64 .. 65 97 .. 52 112 .. 0.83 2 ? -1.9 0.0 4 1.4e+03 46 105 .. 408 471 .. 405 476 .. 0.70 Alignments for each domain: == domain 1 score: 12.2 bits; conditional E-value: 0.00018 TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESB CS MTS 31 lsgkvlDlGcGaGvlgaalakespeaevtlvdvd 64 + kvlD+G+G G+l++++a + e+ +t+++v+ tr|H2ZKD2|H2ZKD2_CIOSA 65 KVAKVLDIGTGSGLLSMMAATAGAEV-ITAIEVN 97 5568***************9998885.7888776 PP == domain 2 score: -1.9 bits; conditional E-value: 4 HHHHHHHTTC.EEEEEESBHHHHHHHHHHHHHTTGC....EEEEE-STTTTSTTS-EEEEEE-- CS MTS 46 gaalakespeaevtlvdvdarAlesakenleankle....vevvasdvleeveekkfdlivsNP 105 +++a+ +p++ v+++++++ A + e ++n+++ v++ +d+ + +e +++ l v P tr|H2ZKD2|H2ZKD2_CIOSA 408 PLVVAQCHPRLGVVALEKSTIAQRGLVELKRSNNIDnlevVRYDPEDISKSLESGDISLFVAEP 471 5788999999999999999998666666666666655334666677788888877777777766 PP >> tr|H2YL80|H2YL80_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.4 0.1 0.00033 0.11 26 77 .. 75 127 .. 64 200 .. 0.71 Alignments for each domain: == domain 1 score: 11.4 bits; conditional E-value: 0.00033 HCHCC..TCSEEEEET-TTSHHHHHHHHHTTC.EEEEEESBHHHHHHHHHHHHH CS MTS 26 tlpke..lsgkvlDlGcGaGvlgaalakespeaevtlvdvdarAlesakenlea 77 +l+k+ + vlDlGcG G ++ k+ p+ ++ ++d ++ +k ++ tr|H2YL80|H2YL80_CIOSA 75 ALNKRgvNHPVVLDLGCGKGGDILKWDKARPN-HLICTDLAETSVSQCKDRYAL 127 555555444569********999999999999.799999999999988876543 PP >> tr|H2ZL66|H2ZL66_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.0 0.0 0.00045 0.15 32 52 .. 72 92 .. 47 108 .. 0.80 Alignments for each domain: == domain 1 score: 11.0 bits; conditional E-value: 0.00045 CSEEEEET-TTSHHHHHHHHH CS MTS 32 sgkvlDlGcGaGvlgaalake 52 s +lDlGcG G+++ +l ++ tr|H2ZL66|H2ZL66_CIOSA 72 SPLALDLGCGRGYISQELSEF 92 3448***********998765 PP >> tr|H2YJS6|H2YJS6_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.1 0.0 0.00042 0.14 23 158 .. 100 235 .. 97 244 .. 0.78 Alignments for each domain: == domain 1 score: 11.1 bits; conditional E-value: 0.00042 HHHHCHCCTCSEEEEET-TTSHHHHHHHHHTTC.E..EEEEESBHHHHHHHHHHHHHTTGCEEEEE-STTTTSTTS-EEEEEE--.- CS MTS 23 LletlpkelsgkvlDlGcGaGvlgaalakespeae..vtlvdvdarAlesakenleanklevevvasdvleeveekkfdlivsNP.P 106 Ll + +++ gkvl +G G+ + + +++ + + + +++ d ++ l+ + + + ++ ++++v+ ++ ++fd i+ P tr|H2YJS6|H2YJS6_CIOSA 100 LLASIASSKGGKVLEIGFGMAIAASKIQTRDISEHwiIECNDGVFNRLQTWAKEQPHVVVPLKGMWEEVVPVLPSQHFDGILYDTyP 186 66777778999*********99998887765444444999999999999999999999999*********************98637 PP STTTCHCHHHHHHHHHHHHHHHEEEEEEEEEEEETTSCHHHHHHHHHS--EE CS MTS 107 fhagkatelavaeeliaeAkeaLkegGeLliVanrklgyeslleelfgnvev 158 + ++ +++ + + ++A++ Lk+gG L+ + +l++++++++e tr|H2YJS6|H2YJS6_CIOSA 187 LSESDW-HTHQFQFIKNHANRLLKPGGVLTYCN--LTSWGQLMKDKYEDIEK 235 766655.78888889999*********998653..33445555555555544 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (169 nodes) Target sequences: 11592 (4231397 residues searched) Passed MSV filter: 334 (0.028813); expected 231.8 (0.02) Passed bias filter: 292 (0.0251898); expected 231.8 (0.02) Passed Vit filter: 64 (0.00552105); expected 11.6 (0.001) Passed Fwd filter: 34 (0.00293306); expected 0.1 (1e-05) Initial search space (Z): 11592 [actual number of targets] Domain search space (domZ): 34 [number of targets reported over threshold] # CPU time: 0.11u 0.01s 00:00:00.12 Elapsed: 00:00:00.03 # Mc/sec: 23836.87 // [ok]