# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/MafB19-deam.hmm.txt
# target sequence database: proteomes/Ciona_savignyi.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: MafB19-deam [M=138]
Accession: PF14437.5
Description: MafB19-like deaminase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.8e-17 61.7 3.6 1.3e-15 56.7 3.6 2.0 1 tr|H2Y774|H2Y774_CIOSA Uncharacterized protein OS=Ciona savi
1.7e-16 59.6 0.2 2.1e-16 59.3 0.2 1.2 1 tr|H2Z9J2|H2Z9J2_CIOSA Uncharacterized protein OS=Ciona savi
8.7e-11 41.1 1.7 4.8e-10 38.7 0.9 2.5 1 tr|H2YHC7|H2YHC7_CIOSA Uncharacterized protein OS=Ciona savi
Domain annotation for each sequence (and alignments):
>> tr|H2Y774|H2Y774_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 56.7 3.6 3.5e-19 1.3e-15 5 111 .. 12 136 .. 8 143 .. 0.83
Alignments for each domain:
== domain 1 score: 56.7 bits; conditional E-value: 3.5e-19
MafB19-deam 5 kafrkalaevekatkikedkigaviv.kdkkviargsnekelnakataHaEiaalqqAakklkskr..l............ddatly 76
k+++ a + +e+a+ +e+++g+viv ++++ +a+g n+ + ++at HaE a+ A +k+ s+ ++++l+
tr|H2Y774|H2Y774_CIOSA 12 KWMEVAFNYAEHALTNGEVPVGCVIVfNNSEELAVGRNRVNELKNATRHAELVAIDEALEKINSQLwrNehpnitdssevfKNCVLF 98
79999999***************9999**********************************9886422122222222233378**** PP
MafB19-deam 77 vtlepCdmCagaivqaglkklvygagnpks...lnkLk 111
vt+epC mC a+ +++k+vyg++n+ + ++L+
tr|H2Y774|H2Y774_CIOSA 99 VTVEPCIMCCAALRAMKIPKVVYGCNNERFggcGSVLS 136
**********9**999**********998766644444 PP
>> tr|H2Z9J2|H2Z9J2_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 59.3 0.2 5.5e-20 2.1e-16 2 106 .. 26 145 .. 25 176 .. 0.85
Alignments for each domain:
== domain 1 score: 59.3 bits; conditional E-value: 5.5e-20
MafB19-deam 2 dkekafrkalaevekatkikedkigaviv.kdkkviargsn..................ekelnakataHaEiaalqqAakklkskr 69
++ ++f++ +++ +++k + ++ga iv ++k++++g+n +++ HaE++a++ +s
tr|H2Z9J2|H2Z9J2_CIOSA 26 EWRDYFMSVAFLSAQRSKDPSTQVGACIVnDENKIVGIGYNgmpnhcsdddlpwarkgnWLDTKYPYVCHAEMNAIMNK--NCSS-- 108
5889*********************97774779*********************998774455667789*******964..4444.. PP
MafB19-deam 70 lddatlyvtlepCdmCagaivqaglkklvygagnpks 106
+++t+yv l pC+ Ca++i+q+g+kk++y +++ k
tr|H2Z9J2|H2Z9J2_CIOSA 109 VSGCTIYVALFPCNECAKLIIQSGIKKVIYMSDKHKE 145
59*****************************998776 PP
>> tr|H2YHC7|H2YHC7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 38.7 0.9 1.2e-13 4.8e-10 70 127 .. 258 324 .. 162 326 .] 0.81
Alignments for each domain:
== domain 1 score: 38.7 bits; conditional E-value: 1.2e-13
MafB19-deam 70 lddatlyvtlepCdmCagaivqaglkklvygagnpks.....lnkLkvkekngrvelv....eddck 127
++tlyvt+epC mC a+ +++k++ yg++ + + ++ke n+r+e++ e++c+
tr|H2YHC7|H2YHC7_CIOSA 258 CTNLTLYVTREPCIMCCMALLHSRIKRVFYGTSFVGGgfgssYKLNTIKELNHRFEVFqgvlENECS 324
5689*****************************6655999975555799*********999999997 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (138 nodes)
Target sequences: 11592 (4231397 residues searched)
Passed MSV filter: 364 (0.031401); expected 231.8 (0.02)
Passed bias filter: 237 (0.0204451); expected 231.8 (0.02)
Passed Vit filter: 15 (0.001294); expected 11.6 (0.001)
Passed Fwd filter: 3 (0.000258799); expected 0.1 (1e-05)
Initial search space (Z): 11592 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.07u 0.00s 00:00:00.07 Elapsed: 00:00:00.03
# Mc/sec: 19464.43
//
[ok]