# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/MafB19-deam.hmm.txt
# target sequence database: proteomes/Homo_sapiens.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: MafB19-deam [M=138]
Accession: PF14437.5
Description: MafB19-like deaminase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.4e-21 78.9 0.1 1.8e-21 78.6 0.1 1.1 1 sp|Q7Z6V5|ADAT2_HUMAN tRNA-specific adenosine deaminase 2
4.6e-14 54.6 0.0 5.1e-14 54.4 0.0 1.1 1 tr|D6RBJ9|D6RBJ9_HUMAN Deoxycytidylate deaminase (Fragment)
5.2e-14 54.4 0.0 6.1e-14 54.2 0.0 1.1 1 sp|P32321|DCTD_HUMAN Deoxycytidylate deaminase OS=Homo sa
6.2e-14 54.2 0.0 7.4e-14 53.9 0.0 1.1 1 sp|P32321-2|DCTD_HUMAN Isoform 2 of Deoxycytidylate deamina
2e-13 52.5 0.0 2.5e-13 52.2 0.0 1.2 1 sp|Q7Z6V5-2|ADAT2_HUMAN Isoform 2 of tRNA-specific adenosine
1.2e-11 46.7 0.6 0.00019 23.5 0.1 2.6 2 sp|Q9BWV3|CDAC1_HUMAN Cytidine and dCMP deaminase domain-c
2.3e-10 42.6 0.0 2.7e-10 42.4 0.0 1.1 1 tr|D6RBN2|D6RBN2_HUMAN Deoxycytidylate deaminase (Fragment)
1e-09 40.5 0.0 1.2e-09 40.3 0.0 1.1 1 tr|D6R9S0|D6R9S0_HUMAN Deoxycytidylate deaminase (Fragment)
5.6e-09 38.1 0.0 3.4e-07 32.3 0.0 2.1 2 sp|Q96EY9|ADAT3_HUMAN Probable inactive tRNA-specific aden
0.00013 24.0 0.0 0.00015 23.8 0.0 1.1 1 sp|Q9BWV3-4|CDAC1_HUMAN Isoform 4 of Cytidine and dCMP deami
0.00028 22.9 0.1 0.00041 22.3 0.1 1.3 1 tr|G8JLM2|G8JLM2_HUMAN Cytidine and dCMP deaminase domain-c
0.0022 20.0 0.4 0.0063 18.5 0.4 1.9 1 tr|F2Z2J8|F2Z2J8_HUMAN Cytidine and dCMP deaminase domain-c
0.0024 19.9 0.5 0.0079 18.2 0.3 1.9 1 sp|Q9BWV3-3|CDAC1_HUMAN Isoform 3 of Cytidine and dCMP deami
0.0094 18.0 0.0 0.012 17.6 0.0 1.1 1 tr|D6RC36|D6RC36_HUMAN Deoxycytidylate deaminase (Fragment)
------ inclusion threshold ------
0.036 16.1 0.1 0.066 15.2 0.0 1.4 1 sp|Q9Y235|ABEC2_HUMAN Probable C->U-editing enzyme APOBEC-
0.31 13.0 0.1 0.5 12.3 0.1 1.3 1 tr|B1AJY7|B1AJY7_HUMAN 26S proteasome non-ATPase regulatory
0.49 12.4 0.2 0.68 11.9 0.2 1.1 1 sp|Q6NTF7-4|ABC3H_HUMAN Isoform 4 of DNA dC->dU-editing enzy
0.53 12.3 0.1 0.92 11.5 0.1 1.3 1 sp|O75832|PSD10_HUMAN 26S proteasome non-ATPase regulatory
0.63 12.0 0.1 0.95 11.4 0.1 1.2 1 sp|Q6NTF7-2|ABC3H_HUMAN Isoform 2 of DNA dC->dU-editing enzy
0.63 12.0 0.1 0.96 11.4 0.1 1.2 1 sp|Q6NTF7-3|ABC3H_HUMAN Isoform 3 of DNA dC->dU-editing enzy
0.74 11.8 0.1 1.1 11.2 0.1 1.2 1 sp|Q6NTF7|ABC3H_HUMAN DNA dC->dU-editing enzyme APOBEC-3H
Domain annotation for each sequence (and alignments):
>> sp|Q7Z6V5|ADAT2_HUMAN tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 78.6 0.1 4.3e-25 1.8e-21 2 136 .. 21 173 .. 20 175 .. 0.87
Alignments for each domain:
== domain 1 score: 78.6 bits; conditional E-value: 4.3e-25
MafB19-deam 2 dkekafrkalaevekatkikedkigavivkdkkviargsnekelnakataHaEiaalqqAakklkskrl......ddatlyvtlepCd 83
+ ek++++a+ ++++a++ +e+++g++ v +++v+++g ne ++ ++at HaE+ a+ q + ++ + + ++lyvt+epC
sp|Q7Z6V5|ADAT2_HUMAN 21 ETEKWMEEAMHMAKEALENTEVPVGCLMVYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKspsevfEHTVLYVTVEPCI 108
679******************************************************999876655543222222789********** PP
MafB19-deam 84 mCagaivqaglkklvygagnpks......lnkLkvkekngrvelv......eddckeilkgffkk 136
mCa a+ +++ +vyg++n+ + ln + +n+ + ++ e+lk f k+
sp|Q7Z6V5|ADAT2_HUMAN 109 MCAAALRLMKIPLVVYGCQNERFggcgsvLNIASADLPNTGRPFQcipgyrAEEAVEMLKTFYKQ 173
**********************99**999999999999999876688888866666888888776 PP
>> tr|D6RBJ9|D6RBJ9_HUMAN Deoxycytidylate deaminase (Fragment) OS=Homo sapiens GN=DCTD PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.4 0.0 1.2e-17 5.1e-14 3 103 .. 15 131 .. 13 166 .. 0.83
Alignments for each domain:
== domain 1 score: 54.4 bits; conditional E-value: 1.2e-17
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalqqAakklkskr 69
+ ++f+ +++ +++k + ++ga iv ++k++++g+n + +++ HaE +a++ s+
tr|D6RBJ9|D6RBJ9_HUMAN 15 WPEYFMAVAFLSAQRSKDPNSQVGACIVnSENKIVGIGYNgmpngcsddvlpwrrtaenKLDTKYPYVCHAELNAIMNK----NSTD 97
6789999999999999999999999666599***********************999655555566789*******975....4555 PP
MafB19-deam 70 lddatlyvtlepCdmCagaivqaglkklvygagn 103
+++ +yv l pC+ Ca++i+qag+k++++ +++
tr|D6RBJ9|D6RBJ9_HUMAN 98 VKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131
89***************************98873 PP
>> sp|P32321|DCTD_HUMAN Deoxycytidylate deaminase OS=Homo sapiens GN=DCTD PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 54.2 0.0 1.4e-17 6.1e-14 3 103 .. 15 131 .. 13 166 .. 0.83
Alignments for each domain:
== domain 1 score: 54.2 bits; conditional E-value: 1.4e-17
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalqqAakklkskrld 71
+ ++f+ +++ +++k + ++ga iv ++k++++g+n + +++ HaE +a++ s+ +
sp|P32321|DCTD_HUMAN 15 WPEYFMAVAFLSAQRSKDPNSQVGACIVnSENKIVGIGYNgmpngcsddvlpwrrtaenKLDTKYPYVCHAELNAIMNK----NSTDVK 99
6789999999999999999999999666599***********************999655555566789*******975....455589 PP
MafB19-deam 72 datlyvtlepCdmCagaivqaglkklvygagn 103
++ +yv l pC+ Ca++i+qag+k++++ +++
sp|P32321|DCTD_HUMAN 100 GCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 131
***************************98873 PP
>> sp|P32321-2|DCTD_HUMAN Isoform 2 of Deoxycytidylate deaminase OS=Homo sapiens GN=DCTD
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 53.9 0.0 1.8e-17 7.4e-14 3 103 .. 26 142 .. 24 177 .. 0.83
Alignments for each domain:
== domain 1 score: 53.9 bits; conditional E-value: 1.8e-17
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalqqAakklkskr 69
+ ++f+ +++ +++k + ++ga iv ++k++++g+n + +++ HaE +a++ s+
sp|P32321-2|DCTD_HUMAN 26 WPEYFMAVAFLSAQRSKDPNSQVGACIVnSENKIVGIGYNgmpngcsddvlpwrrtaenKLDTKYPYVCHAELNAIMNK----NSTD 108
6789999999999999999999999666599***********************999655555566789*******975....4555 PP
MafB19-deam 70 lddatlyvtlepCdmCagaivqaglkklvygagn 103
+++ +yv l pC+ Ca++i+qag+k++++ +++
sp|P32321-2|DCTD_HUMAN 109 VKGCSMYVALFPCNECAKLIIQAGIKEVIFMSDK 142
89***************************98873 PP
>> sp|Q7Z6V5-2|ADAT2_HUMAN Isoform 2 of tRNA-specific adenosine deaminase 2 OS=Homo sapiens GN=ADAT2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 52.2 0.0 5.9e-17 2.5e-13 30 136 .. 2 126 .. 1 128 [. 0.85
Alignments for each domain:
== domain 1 score: 52.2 bits; conditional E-value: 5.9e-17
MafB19-deam 30 vkdkkviargsnekelnakataHaEiaalqqAakklkskrl......ddatlyvtlepCdmCagaivqaglkklvygagnpks... 106
v +++v+++g ne ++ ++at HaE+ a+ q + ++ + + ++lyvt+epC mCa a+ +++ +vyg++n+ +
sp|Q7Z6V5-2|ADAT2_HUMAN 2 VYNNEVVGKGRNEVNQTKNATRHAEMVAIDQVLDWCRQSGKspsevfEHTVLYVTVEPCIMCAAALRLMKIPLVVYGCQNERFggc 87
5689*************************999876655543222222789********************************99** PP
MafB19-deam 107 ...lnkLkvkekngrvelv......eddckeilkgffkk 136
ln + +n+ + ++ e+lk f k+
sp|Q7Z6V5-2|ADAT2_HUMAN 88 gsvLNIASADLPNTGRPFQcipgyrAEEAVEMLKTFYKQ 126
999999999999999876688999866666999888876 PP
>> sp|Q9BWV3|CDAC1_HUMAN Cytidine and dCMP deaminase domain-containing protein 1 OS=Homo sapiens GN=CDADC1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.5 0.1 4.5e-08 0.00019 65 106 .. 118 158 .. 72 193 .. 0.78
2 ! 21.1 0.0 2.4e-07 0.001 49 101 .. 395 445 .. 322 469 .. 0.81
Alignments for each domain:
== domain 1 score: 23.5 bits; conditional E-value: 4.5e-08
MafB19-deam 65 lkskrlddatlyvtlepCdmCagaivqaglkklvygagnpks 106
++rl+++ ly ++pC+ C+++iv+ag+ ++ y ++p+
sp|Q9BWV3|CDAC1_HUMAN 118 H-GSRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPADPEI 158
3.4679***************************998887764 PP
== domain 2 score: 21.1 bits; conditional E-value: 2.4e-07
MafB19-deam 49 ataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvyga 101
HaE +al ++ +k ++ +++vt+ pCd C +i ag+k++ g
sp|Q9BWV3|CDAC1_HUMAN 395 YIIHAEQNALTFRCQEIKPE--ERSMIFVTKCPCDECVPLIKGAGIKQIYAGD 445
567**************999..9*************************98764 PP
>> tr|D6RBN2|D6RBN2_HUMAN Deoxycytidylate deaminase (Fragment) OS=Homo sapiens GN=DCTD PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 42.4 0.0 6.4e-14 2.7e-10 3 92 .. 15 120 .] 13 120 .] 0.87
Alignments for each domain:
== domain 1 score: 42.4 bits; conditional E-value: 6.4e-14
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalqqAakklkskr 69
+ ++f+ +++ +++k + ++ga iv ++k++++g+n + +++ HaE +a++ s+
tr|D6RBN2|D6RBN2_HUMAN 15 WPEYFMAVAFLSAQRSKDPNSQVGACIVnSENKIVGIGYNgmpngcsddvlpwrrtaenKLDTKYPYVCHAELNAIMNK----NSTD 97
6789999999999999999999999666599***********************999655555566789*******975....4555 PP
MafB19-deam 70 lddatlyvtlepCdmCagaivqa 92
+++ +yv l pC+ Ca++i+qa
tr|D6RBN2|D6RBN2_HUMAN 98 VKGCSMYVALFPCNECAKLIIQA 120
89********************8 PP
>> tr|D6R9S0|D6R9S0_HUMAN Deoxycytidylate deaminase (Fragment) OS=Homo sapiens GN=DCTD PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.3 0.0 2.9e-13 1.2e-09 3 91 .. 15 119 .] 13 119 .] 0.87
Alignments for each domain:
== domain 1 score: 40.3 bits; conditional E-value: 2.9e-13
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalqqAakklkskr 69
+ ++f+ +++ +++k + ++ga iv ++k++++g+n + +++ HaE +a++ s+
tr|D6R9S0|D6R9S0_HUMAN 15 WPEYFMAVAFLSAQRSKDPNSQVGACIVnSENKIVGIGYNgmpngcsddvlpwrrtaenKLDTKYPYVCHAELNAIMNK----NSTD 97
6789999999999999999999999666599***********************999655555566789*******975....4555 PP
MafB19-deam 70 lddatlyvtlepCdmCagaivq 91
+++ +yv l pC+ Ca++i+q
tr|D6R9S0|D6R9S0_HUMAN 98 VKGCSMYVALFPCNECAKLIIQ 119
89*******************8 PP
>> sp|Q96EY9|ADAT3_HUMAN Probable inactive tRNA-specific adenosine deaminase-like protein 3 OS=Homo sapiens GN=ADAT3 PE
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 3.7 0.0 0.057 2.4e+02 4 52 .. 174 223 .. 171 240 .. 0.80
2 ! 32.3 0.0 8.1e-11 3.4e-07 75 126 .. 284 344 .. 262 347 .. 0.84
Alignments for each domain:
== domain 1 score: 3.7 bits; conditional E-value: 0.057
MafB19-deam 4 ekafrkalaevekatkikedkigaviv..kdkkviargsnekelnakataH 52
+ ++ a+ ++ a+ + + +gav+v ++v+a+g+ + +++ H
sp|Q96EY9|ADAT3_HUMAN 174 QSHMERAVWAARRAAARGLRAVGAVVVdpASDRVLATGHD-CSCADNPLLH 223
55677778888999999999****99966789******98.4445555555 PP
== domain 2 score: 32.3 bits; conditional E-value: 8.1e-11
MafB19-deam 75 lyvtlepCdmCagaivqaglkklvygagnpks..lnkLkvke...kngrvelv....eddc 126
lyvt+epC mCa a+v a++ ++ yga p++ ++ +++ n+r++++ e++c
sp|Q96EY9|ADAT3_HUMAN 284 LYVTREPCAMCAMALVHARILRVFYGAPSPDGalGTRFRIHArpdLNHRFQVFrgvlEEQC 344
9******************************987567777652225888888877777766 PP
>> sp|Q9BWV3-4|CDAC1_HUMAN Isoform 4 of Cytidine and dCMP deaminase domain-containing protein 1 OS=Homo sapiens GN=CDAD
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.8 0.0 3.6e-08 0.00015 51 101 .. 17 65 .. 4 92 .. 0.84
Alignments for each domain:
== domain 1 score: 23.8 bits; conditional E-value: 3.6e-08
MafB19-deam 51 aHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvyga 101
HaE +al ++ +k ++ +++vt+ pCd C +i ag+k++ g
sp|Q9BWV3-4|CDAC1_HUMAN 17 IHAEQNALTFRCQEIKPE--ERSMIFVTKCPCDECVPLIKGAGIKQIYAGD 65
6**************999..9*************************98774 PP
>> tr|G8JLM2|G8JLM2_HUMAN Cytidine and dCMP deaminase domain-containing protein 1 OS=Homo sapiens GN=CDADC1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 22.3 0.1 9.8e-08 0.00041 48 101 .. 196 247 .. 122 272 .. 0.80
Alignments for each domain:
== domain 1 score: 22.3 bits; conditional E-value: 9.8e-08
MafB19-deam 48 kataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvyga 101
HaE +al ++ +k ++ +++vt+ pCd C +i ag+k++ g
tr|G8JLM2|G8JLM2_HUMAN 196 RYIIHAEQNALTFRCQEIKPE--ERSMIFVTKCPCDECVPLIKGAGIKQIYAGD 247
4567**************999..9*************************98764 PP
>> tr|F2Z2J8|F2Z2J8_HUMAN Cytidine and dCMP deaminase domain-containing protein 1 OS=Homo sapiens GN=CDADC1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.5 0.4 1.5e-06 0.0063 64 95 .. 117 147 .. 51 151 .. 0.79
Alignments for each domain:
== domain 1 score: 18.5 bits; conditional E-value: 1.5e-06
MafB19-deam 64 klkskrlddatlyvtlepCdmCagaivqaglk 95
k ++rl+++ ly ++pC+ C+++iv++ l
tr|F2Z2J8|F2Z2J8_HUMAN 117 KH-GSRLKNCDLYFSRKPCSACLKMIVNGLLE 147
33.4679*********************9875 PP
>> sp|Q9BWV3-3|CDAC1_HUMAN Isoform 3 of Cytidine and dCMP deaminase domain-containing protein 1 OS=Homo sapiens GN=CDAD
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.2 0.3 1.9e-06 0.0079 65 95 .. 118 147 .. 72 151 .. 0.78
Alignments for each domain:
== domain 1 score: 18.2 bits; conditional E-value: 1.9e-06
MafB19-deam 65 lkskrlddatlyvtlepCdmCagaivqaglk 95
++rl+++ ly ++pC+ C+++iv++ l
sp|Q9BWV3-3|CDAC1_HUMAN 118 H-GSRLKNCDLYFSRKPCSACLKMIVNGLLG 147
3.4679*********************9775 PP
>> tr|D6RC36|D6RC36_HUMAN Deoxycytidylate deaminase (Fragment) OS=Homo sapiens GN=DCTD PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.6 0.0 2.8e-06 0.012 3 59 .. 15 91 .. 13 95 .. 0.86
Alignments for each domain:
== domain 1 score: 17.6 bits; conditional E-value: 2.8e-06
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalq 59
+ ++f+ +++ +++k + ++ga iv ++k++++g+n + +++ HaE +a++
tr|D6RC36|D6RC36_HUMAN 15 WPEYFMAVAFLSAQRSKDPNSQVGACIVnSENKIVGIGYNgmpngcsddvlpwrrtaenKLDTKYPYVCHAELNAIM 91
6789999999999999999999999666599***********************999655555566789*******9 PP
>> sp|Q9Y235|ABEC2_HUMAN Probable C->U-editing enzyme APOBEC-2 OS=Homo sapiens GN=APOBEC2 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 15.2 0.0 1.6e-05 0.066 42 91 .. 91 137 .. 61 150 .. 0.85
Alignments for each domain:
== domain 1 score: 15.2 bits; conditional E-value: 1.6e-05
MafB19-deam 42 ekelnakataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivq 91
e +++a aHaE a ++ ++ ++t yv pC Ca i++
sp|Q9Y235|ABEC2_HUMAN 91 E---DEHAAAHAEEAFFNTILPAFDPALRYNVTWYVSSSPCAACADRIIK 137
3...45899*****9999999999999999***************99997 PP
>> tr|B1AJY7|B1AJY7_HUMAN 26S proteasome non-ATPase regulatory subunit 10 OS=Homo sapiens GN=PSMD10 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.3 0.1 0.00012 0.5 14 68 .. 44 120 .. 34 130 .. 0.86
Alignments for each domain:
== domain 1 score: 12.3 bits; conditional E-value: 0.00012
MafB19-deam 14 vekatkikedkiga.vivkdkkviargsn.....................ekelnakataHaEiaalqqAakklksk 68
+++a++++ d i++ + k+ +v a+++n e n +a +H E+ a+ +Aa k+ k
tr|B1AJY7|B1AJY7_HUMAN 44 LHIAASAGRDEIVKaLLGKGAQVNAVNQNgctplhyaasknrheiavmllEGGANPDAKDHYEATAMHRAAAKGNLK 120
56788899999988455599*****************************9888999**************9998655 PP
>> sp|Q6NTF7-4|ABC3H_HUMAN Isoform 4 of DNA dC->dU-editing enzyme APOBEC-3H OS=Homo sapiens GN=APOBEC3H
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.9 0.2 0.00016 0.68 46 89 .. 48 92 .. 34 97 .. 0.79
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 0.00016
MafB19-deam 46 nakataHaEiaalqqAakkl.kskrlddatlyvtlepCdmCagai 89
++k HaEi ++ + +++ ++t y t pC+ Ca +
sp|Q6NTF7-4|ABC3H_HUMAN 48 ENKKKCHAEICFINEIKSMGlDETQCYQVTCYLTWSPCSSCAWEL 92
567889****9999886554145667899************9655 PP
>> sp|O75832|PSD10_HUMAN 26S proteasome non-ATPase regulatory subunit 10 OS=Homo sapiens GN=PSMD10 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.5 0.1 0.00022 0.92 15 68 .. 78 153 .. 72 163 .. 0.86
Alignments for each domain:
== domain 1 score: 11.5 bits; conditional E-value: 0.00022
MafB19-deam 15 ekatkikedkiga.vivkdkkviargsn.....................ekelnakataHaEiaalqqAakklksk 68
++a++++ d i++ + k+ +v a+++n e n +a +H E+ a+ +Aa k+ k
sp|O75832|PSD10_HUMAN 78 HIAASAGRDEIVKaLLGKGAQVNAVNQNgctplhyaasknrheiavmllEGGANPDAKDHYEATAMHRAAAKGNLK 153
56788888888884555999****************************9888999**************9998655 PP
>> sp|Q6NTF7-2|ABC3H_HUMAN Isoform 2 of DNA dC->dU-editing enzyme APOBEC-3H OS=Homo sapiens GN=APOBEC3H
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.4 0.1 0.00023 0.95 46 89 .. 48 92 .. 34 96 .. 0.79
Alignments for each domain:
== domain 1 score: 11.4 bits; conditional E-value: 0.00023
MafB19-deam 46 nakataHaEiaalqqAakkl.kskrlddatlyvtlepCdmCagai 89
++k HaEi ++ + +++ ++t y t pC+ Ca +
sp|Q6NTF7-2|ABC3H_HUMAN 48 ENKKKCHAEICFINEIKSMGlDETQCYQVTCYLTWSPCSSCAWEL 92
567889****9999886554145667899************9655 PP
>> sp|Q6NTF7-3|ABC3H_HUMAN Isoform 3 of DNA dC->dU-editing enzyme APOBEC-3H OS=Homo sapiens GN=APOBEC3H
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.4 0.1 0.00023 0.96 46 89 .. 48 92 .. 34 96 .. 0.79
Alignments for each domain:
== domain 1 score: 11.4 bits; conditional E-value: 0.00023
MafB19-deam 46 nakataHaEiaalqqAakkl.kskrlddatlyvtlepCdmCagai 89
++k HaEi ++ + +++ ++t y t pC+ Ca +
sp|Q6NTF7-3|ABC3H_HUMAN 48 ENKKKCHAEICFINEIKSMGlDETQCYQVTCYLTWSPCSSCAWEL 92
567889****9999886554145667899************9655 PP
>> sp|Q6NTF7|ABC3H_HUMAN DNA dC->dU-editing enzyme APOBEC-3H OS=Homo sapiens GN=APOBEC3H PE=1 SV=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.2 0.1 0.00027 1.1 46 89 .. 48 92 .. 34 96 .. 0.79
Alignments for each domain:
== domain 1 score: 11.2 bits; conditional E-value: 0.00027
MafB19-deam 46 nakataHaEiaalqqAakkl.kskrlddatlyvtlepCdmCagai 89
++k HaEi ++ + +++ ++t y t pC+ Ca +
sp|Q6NTF7|ABC3H_HUMAN 48 ENKKKCHAEICFINEIKSMGlDETQCYQVTCYLTWSPCSSCAWEL 92
567888****9999886554145667899************9655 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (138 nodes)
Target sequences: 88473 (35070517 residues searched)
Passed MSV filter: 2404 (0.0271721); expected 1769.5 (0.02)
Passed bias filter: 1599 (0.0180733); expected 1769.5 (0.02)
Passed Vit filter: 134 (0.00151459); expected 88.5 (0.001)
Passed Fwd filter: 21 (0.000237361); expected 0.9 (1e-05)
Initial search space (Z): 88473 [actual number of targets]
Domain search space (domZ): 21 [number of targets reported over threshold]
# CPU time: 0.41u 0.02s 00:00:00.43 Elapsed: 00:00:00.21
# Mc/sec: 23046.34
//
[ok]