# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/MafB19-deam.hmm.txt
# target sequence database: proteomes/Monosiga_brevicollis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: MafB19-deam [M=138]
Accession: PF14437.5
Description: MafB19-like deaminase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
4.8e-12 44.8 0.1 5.8e-12 44.6 0.1 1.1 1 tr|A9UWJ1|A9UWJ1_MONBE Predicted protein (Fragment) OS=Monos
1.1e-10 40.4 0.0 1.4e-10 40.2 0.0 1.1 1 tr|A9VDN1|A9VDN1_MONBE Predicted protein OS=Monosiga brevico
0.00049 18.9 0.0 0.00091 18.1 0.0 1.4 1 tr|A9V3W2|A9V3W2_MONBE Predicted protein OS=Monosiga brevico
0.0038 16.1 0.0 0.011 14.5 0.0 1.7 2 tr|A9V4N9|A9V4N9_MONBE Predicted protein OS=Monosiga brevico
0.0056 15.5 0.2 0.009 14.8 0.2 1.3 1 tr|A9UVH1|A9UVH1_MONBE Predicted protein (Fragment) OS=Monos
Domain annotation for each sequence (and alignments):
>> tr|A9UWJ1|A9UWJ1_MONBE Predicted protein (Fragment) OS=Monosiga brevicollis OX=81824 GN=3136 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 44.6 0.1 3.1e-15 5.8e-12 3 106 .. 8 125 .. 6 141 .. 0.83
Alignments for each domain:
== domain 1 score: 44.6 bits; conditional E-value: 3.1e-15
MafB19-deam 3 kekafrkalaevekatkikedkiga.vivkdkkviargsn...................ekelnakataHaEiaalqqAakklkskr 69
ke ++++ + ++ k++k + ++g+ +i d+ v+ g+n e++ HaE++a+ +
tr|A9UWJ1|A9UWJ1_MONBE 8 KECWYMSMAMLAAKRSKDPNTQVGCtIINPDGIVVSMGYNgfpigcsdqelpwqkhsanPLETKFPYVCHAEMNAILNT----NDES 90
677899999999999999999***9455588999***************999998886545555667889999999876....6666 PP
MafB19-deam 70 lddatlyvtlepCdmCagaivqaglkklvygagnpks 106
++tly tl pC+ Ca++i+qag+ ++vy ++ ks
tr|A9UWJ1|A9UWJ1_MONBE 91 VRGCTLYATLFPCNECAKMIIQAGIVEVVYLCD--KS 125
899***************************998..44 PP
>> tr|A9VDN1|A9VDN1_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=30328 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 40.2 0.0 7.4e-14 1.4e-10 17 109 .. 59 156 .. 43 192 .. 0.85
Alignments for each domain:
== domain 1 score: 40.2 bits; conditional E-value: 7.4e-14
MafB19-deam 17 atkikedkigaviv.kdkkviargsnekelnakataHaEiaalqqAakklkskrldd....atlyvtlepCdmCagaivqaglkklv 98
+++++ + gav+ d+++ia+g n+ + +++aHaE a + A + l++ rl++ +tl+ +pC C ga + ag+ +lv
tr|A9VDN1|A9VDN1_MONBE 59 VLHKTGGPFGAVVFgPDHRIIAVGVNRVVPQVSSLAHAENMAYMLAQQHLQTYRLNEknapVTLVSSAQPCCQCYGATIWAGIDRLV 145
456778899**9997899**********************************9998744446888899******************* PP
MafB19-deam 99 ygagnpkslnk 109
ga + ++
tr|A9VDN1|A9VDN1_MONBE 146 IGARASDVMEL 156
***97777544 PP
>> tr|A9V3W2|A9V3W2_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=33129 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.1 0.0 4.9e-07 0.00091 3 102 .. 28 143 .. 27 175 .. 0.80
Alignments for each domain:
== domain 1 score: 18.1 bits; conditional E-value: 4.9e-07
MafB19-deam 3 kekafrkalaevekatkikedkigaviv.kdkkviargsn...................ekelnakataHaEiaalqqAakklkskr 69
++++f+ +++ k++k + +ig iv +k++++g+n +++ aE++a+ s
tr|A9V3W2|A9V3W2_MONBE 28 WDDYFMAVAFLSAKRSKDPNTQIGSCIVnAANKIVGIGYNgmprgcdddalpwaregpsVLDTKYPYVCNAEMNAI----LNKNSAS 110
7899*******************99666489*********998888777777776555423333334444555555....4445556 PP
MafB19-deam 70 lddatlyvtlepCdmCagaivqaglkklvygag 102
l ++ +y+ p + a++i+qag+ +++y ++
tr|A9V3W2|A9V3W2_MONBE 111 LRGCRMYTAFFPNSESAKLIIQAGITEVLYTVD 143
9****************************9887 PP
>> tr|A9V4N9|A9V4N9_MONBE Predicted protein OS=Monosiga brevicollis OX=81824 GN=37934 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -2.6 0.0 1.2 2.1e+03 39 61 .. 276 302 .. 264 304 .. 0.65
2 ! 14.5 0.0 6e-06 0.011 14 97 .. 363 461 .. 358 468 .. 0.80
Alignments for each domain:
== domain 1 score: -2.6 bits; conditional E-value: 1.2
MafB19-deam 39 gsnekelnakataHaEi....aalqqA 61
++++ + + H+E+ +a+q+A
tr|A9V4N9|A9V4N9_MONBE 276 DKMKQLVADYEDMHQEAsksfKAFQKA 302
455555566667788886666677766 PP
== domain 2 score: 14.5 bits; conditional E-value: 6e-06
MafB19-deam 14 vekatkikedkigavivkdkkviargsn..............ekelnakata.....HaEiaalqqAakklkskrlddatlyvtlep 81
v+ +++ +++ +ga v+d+ i g+n +k+ ++++t+ HaE +a+ + k ++l +a +y+ p
tr|A9V4N9|A9V4N9_MONBE 363 VSLRSEDSDRRVGAALVQDDVLISYGYNafrsqathfdlprtKKQSQQHTTKypyviHAECNAV----LFSKVTNLGEARIYTNYFP 445
5667788999****************************99994444444444222226776665....57799999*********** PP
MafB19-deam 82 CdmCagaivqaglkkl 97
C C +++ + +++++
tr|A9V4N9|A9V4N9_MONBE 446 CLSCFRILEYKKIRDI 461
*****99999888887 PP
>> tr|A9UVH1|A9UVH1_MONBE Predicted protein (Fragment) OS=Monosiga brevicollis OX=81824 GN=2378 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.8 0.2 4.9e-06 0.009 14 90 .. 12 86 .. 2 90 .. 0.77
Alignments for each domain:
== domain 1 score: 14.8 bits; conditional E-value: 4.9e-06
MafB19-deam 14 vekatkikedkigaviv..kdkkviargsnekelnakataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaiv 90
+++ ++++ +gav +++ +++ +++++ + + HaE aa+ a + +tl v pC+ C iv
tr|A9UVH1|A9UVH1_MONBE 12 ARA--PVSNFHVGAVMLtdHGHIFLGANQEFDHQAIGMSIHAEQAAISNIAHHPDAG--IPVTLAVNAAPCGHCRQFIV 86
444..45555566655533889999**********************9976655555..689************88887 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (138 nodes)
Target sequences: 9188 (5511963 residues searched)
Passed MSV filter: 305 (0.0331955); expected 183.8 (0.02)
Passed bias filter: 207 (0.0225294); expected 183.8 (0.02)
Passed Vit filter: 19 (0.00206791); expected 9.2 (0.001)
Passed Fwd filter: 5 (0.000544188); expected 0.1 (1e-05)
Initial search space (Z): 9188 [actual number of targets]
Domain search space (domZ): 5 [number of targets reported over threshold]
# CPU time: 0.07u 0.00s 00:00:00.07 Elapsed: 00:00:00.03
# Mc/sec: 25355.03
//
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