# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/MafB19-deam.hmm.txt
# target sequence database: proteomes/Ornithorhynchus_anatinus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: MafB19-deam [M=138]
Accession: PF14437.5
Description: MafB19-like deaminase
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.5e-18 65.1 0.1 8.4e-18 64.7 0.1 1.2 1 tr|F7EUV1|F7EUV1_ORNAN Uncharacterized protein OS=Ornithorhy
3.1e-12 46.7 1.7 2.9e-05 24.1 0.3 2.6 2 tr|F6W5N8|F6W5N8_ORNAN Cytidine and dCMP deaminase domain co
1.3e-10 41.5 0.2 3.5e-07 30.3 0.0 2.3 2 tr|F7ASC0|F7ASC0_ORNAN Adenosine deaminase, tRNA specific 3
3.6e-10 40.0 0.1 4.1e-10 39.8 0.1 1.1 1 tr|F6V0Z2|F6V0Z2_ORNAN Uncharacterized protein OS=Ornithorhy
0.0016 18.5 0.1 0.0027 17.7 0.0 1.4 2 tr|F6PKH9|F6PKH9_ORNAN Apolipoprotein B mRNA editing enzyme
Domain annotation for each sequence (and alignments):
>> tr|F7EUV1|F7EUV1_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 64.7 0.1 1.9e-21 8.4e-18 13 107 .. 1 104 [. 1 118 [. 0.86
Alignments for each domain:
== domain 1 score: 64.7 bits; conditional E-value: 1.9e-21
MafB19-deam 13 evekatkikedkigavivkdkkviargsnekelnakataHaEiaalqqAak......klkskrlddatlyvtlepCdmCagaivqag 93
++++a++ +e+++g++ v ++k+++ g ne + ++at HaE+ a+ q + k+ + ++++lyvt+epC mCa a+ +
tr|F7EUV1|F7EUV1_ORNAN 1 QAQEALENGEVPVGCLMVYNNKIVGMGRNEVNETKNATRHAEMVAIDQVLNwclrrgKNPTEVFQRTVLYVTVEPCIMCAAALRIMR 87
5899***************************************9999987533333366677789********************** PP
MafB19-deam 94 lkklvygagnpks...l 107
++ +vyg++n+ +
tr|F7EUV1|F7EUV1_ORNAN 88 IPLVVYGCQNERFggcG 104
*********99876662 PP
>> tr|F6W5N8|F6W5N8_ORNAN Cytidine and dCMP deaminase domain containing 1 OS=Ornithorhynchus anatinus OX=9258 GN=CDADC1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.1 0.3 6.7e-09 2.9e-05 24 105 .. 87 157 .. 67 196 .. 0.72
2 ! 21.3 0.1 5e-08 0.00022 47 100 .. 396 447 .. 324 472 .. 0.79
Alignments for each domain:
== domain 1 score: 24.1 bits; conditional E-value: 6.7e-09
MafB19-deam 24 kigavivkdkkviargsnekelnakataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvygagnpk 105
k g v+vk+ k+++ ++ + + ia++++ +rl+++ ly ++pC+ C+++iv+ag+ ++ y ++p+
tr|F6W5N8|F6W5N8_ORNAN 87 KTGLVVVKNMKIVGLHCSSED-----LHAGQIAVIKRG------SRLKNCDLYFSRKPCSACLKMIVNAGVNRISYWPADPE 157
455566677777666665333.....222345555554......789***************************99877766 PP
== domain 2 score: 21.3 bits; conditional E-value: 5e-08
MafB19-deam 47 akataHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvyg 100
HaE +al ++ +k ++ +++vt+ pCd C +i ag+k++ g
tr|F6W5N8|F6W5N8_ORNAN 396 FRYIIHAEQNALTFRCQEIKPE--ERSMIFVTKCPCDECVPLIKGAGIKQIYAG 447
34567**************999..9*************************9876 PP
>> tr|F7ASC0|F7ASC0_ORNAN Adenosine deaminase, tRNA specific 3 OS=Ornithorhynchus anatinus OX=9258 GN=ADAT3 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 9.0 0.0 0.0003 1.3 3 54 .. 176 228 .. 174 253 .. 0.84
2 ! 30.3 0.0 8e-11 3.5e-07 75 126 .. 293 353 .. 287 359 .. 0.79
Alignments for each domain:
== domain 1 score: 9.0 bits; conditional E-value: 0.0003
MafB19-deam 3 kekafrkalaevekatkikedkigaviv..kdkkviargsnekelnakataHaE 54
+ +++ka+ ++++++++ + +gav+v + v+a+g+ + +++ Ha
tr|F7ASC0|F7ASC0_ORNAN 176 MQTYMEKAIHTARQGAEKGMKAVGAVVVdpATEDVLAVGHDCSS-ASNPLLHAT 228
589**********************999556789*****99444.667777775 PP
== domain 2 score: 30.3 bits; conditional E-value: 8e-11
MafB19-deam 75 lyvtlepCdmCagaivqaglkklvygagnpks.....lnkLkvkekngrvelv....eddc 126
lyvt epC mCa a+ ++++++ yga+ p++ + + + n+++e++ e +c
tr|F7ASC0|F7ASC0_ORNAN 293 LYVTSEPCVMCAMALLHSRIQRVFYGASSPDGalgtrYKIHSKEDLNHHFEVFrgilETEC 353
8******************************998554333334456888888866666555 PP
>> tr|F6V0Z2|F6V0Z2_ORNAN Uncharacterized protein OS=Ornithorhynchus anatinus OX=9258 GN=DCTD PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 39.8 0.1 9.5e-14 4.1e-10 51 103 .. 31 79 .. 17 116 .. 0.79
Alignments for each domain:
== domain 1 score: 39.8 bits; conditional E-value: 9.5e-14
MafB19-deam 51 aHaEiaalqqAakklkskrlddatlyvtlepCdmCagaivqaglkklvygagn 103
HaE +a++ s+ +++ +yv l pC+ Ca++i+qag+k++++ +++
tr|F6V0Z2|F6V0Z2_ORNAN 31 CHAELNAIMNK----NSTDVKGCSIYVALFPCNECAKLIIQAGIKDVIFMSDK 79
6*******975....455589***************************98873 PP
>> tr|F6PKH9|F6PKH9_ORNAN Apolipoprotein B mRNA editing enzyme catalytic subunit 2 OS=Ornithorhynchus anatinus OX=9258
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.7 0.0 6.1e-07 0.0027 34 90 .. 48 101 .. 18 110 .. 0.76
2 ? -3.3 0.0 2 8.7e+03 90 99 .. 127 136 .. 126 148 .. 0.64
Alignments for each domain:
== domain 1 score: 17.7 bits; conditional E-value: 6.1e-07
MafB19-deam 34 kviargsnekelnakataHaEi...aalqqAakklkskrlddatlyvtlepCdmCagaiv 90
+ arg+ e+e +a aHaE +++ A++ + + ++t yv pC Ca i+
tr|F6PKH9|F6PKH9_ORNAN 48 NQTARGYLEDE---HAAAHAEEaffNSILPACD---QALKYNVTWYVSSSPCAACADRIA 101
45677888666...8999**9944455555655...555569*************98775 PP
== domain 2 score: -3.3 bits; conditional E-value: 2
MafB19-deam 90 vqaglkklvy 99
+qa+lkkl
tr|F6PKH9|F6PKH9_ORNAN 127 IQAALKKLKA 136
5666666644 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (138 nodes)
Target sequences: 21677 (8259262 residues searched)
Passed MSV filter: 534 (0.0246344); expected 433.5 (0.02)
Passed bias filter: 366 (0.0168843); expected 433.5 (0.02)
Passed Vit filter: 27 (0.00124556); expected 21.7 (0.001)
Passed Fwd filter: 6 (0.000276791); expected 0.2 (1e-05)
Initial search space (Z): 21677 [actual number of targets]
Domain search space (domZ): 5 [number of targets reported over threshold]
# CPU time: 0.11u 0.01s 00:00:00.12 Elapsed: 00:00:00.06
# Mc/sec: 18996.30
//
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