# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Met_10.hmm.txt
# target sequence database: proteomes/Dictyostelium_discoideum.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Met_10 [M=199]
Accession: PF02475.15
Description: Met-10+ like-protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
5.8e-64 215.0 1.1 1.2e-63 214.0 1.1 1.5 1 sp|Q54WD6|TRM5_DICDI tRNA (guanine(37)-N1)-methyltransfera
0.00026 20.3 0.2 0.00039 19.7 0.2 1.4 1 tr|Q552E3|Q552E3_DICDI Uncharacterized protein OS=Dictyostel
0.00038 19.8 0.0 0.00072 18.9 0.0 1.4 1 tr|Q54TL4|Q54TL4_DICDI Uncharacterized protein OS=Dictyostel
0.00056 19.2 0.0 0.00095 18.5 0.0 1.3 1 sp|Q54KI3|ANM5_DICDI Protein arginine N-methyltransferase
0.0014 17.9 0.0 0.002 17.4 0.0 1.3 1 tr|Q54PP5|Q54PP5_DICDI Uncharacterized protein OS=Dictyostel
0.0015 17.9 0.1 0.0018 17.6 0.1 1.3 1 tr|Q54UI8|Q54UI8_DICDI Uncharacterized protein OS=Dictyostel
0.0027 17.0 0.0 0.0058 15.9 0.0 1.5 1 tr|Q557I0|Q557I0_DICDI Uncharacterized protein OS=Dictyostel
0.0031 16.8 0.1 0.0053 16.1 0.1 1.3 1 sp|Q54EF2|ANM1_DICDI Protein arginine N-methyltransferase
0.0084 15.4 0.0 0.014 14.7 0.0 1.4 1 tr|Q54UI9|Q54UI9_DICDI Uncharacterized protein OS=Dictyostel
------ inclusion threshold ------
0.012 14.8 0.1 0.023 14.0 0.0 1.3 1 tr|Q54VE3|Q54VE3_DICDI Uncharacterized protein OS=Dictyostel
0.044 13.0 0.2 0.059 12.6 0.2 1.2 1 tr|Q54FL8|Q54FL8_DICDI Uncharacterized protein OS=Dictyostel
Domain annotation for each sequence (and alignments):
>> sp|Q54WD6|TRM5_DICDI tRNA (guanine(37)-N1)-methyltransferase OS=Dictyostelium discoideum OX=44689 GN=trmt5 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 214.0 1.1 1e-66 1.2e-63 2 189 .. 114 306 .. 113 313 .. 0.94
Alignments for each domain:
== domain 1 score: 214.0 bits; conditional E-value: 1e-66
EEEEETTEEEEEB-TTSSHHHHHHHHHHHHHS.S-SCEEEE-S-SBTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS---GGGHH CS
Met_10 2 kfeiiGdvvilnlreelkeykkvigevildkt.kvktvlrkvsevegefRtfelevlaGsdstetihkEngcrfklDvskvyfssklea 89
+fe+iG+++++nl++e ++k++ig++ildk+ +vktvl+kv+e++++fRtf++e+laG+ +++ + kEn c f++ + +vy++s+l+
sp|Q54WD6|TRM5_DICDI 114 SFERIGHIIHVNLKDEQLPFKYIIGQAILDKNiQVKTVLNKVGEIDTVFRTFKIEILAGEPDLVAEIKENECIFRFNFEEVYWNSRLQY 202
79*********************************************************999*************************** PP
HHHHHHTT--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EE.....EEE CS
Met_10 90 ErerlaklveegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqlad.....rvv 173
E++ l++++++ ++++d+fAG+Gpfa+p+ak k+ +v+a+dlnP+svky+ken k N++e++v+ + D+r+++++ + +vv
sp|Q54WD6|TRM5_DICDI 203 EHMELVNTFKKEDIICDMFAGVGPFALPAAK-IKKCKVYANDLNPSSVKYMKENAKTNRLESKVEISNLDARDFVKSLVEKsipftHVV 290
*******************************.67777**************************************84444356666*** PP
E--TTTGGGGHHHHHH CS
Met_10 174 mnlpksaieFldkvla 189
mnlp+++ieFld +
sp|Q54WD6|TRM5_DICDI 291 MNLPSTSIEFLDVFRD 306
***********97655 PP
>> tr|Q552E3|Q552E3_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0276237 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 19.7 0.2 3.4e-07 0.00039 100 169 .. 46 116 .. 9 217 .. 0.82
Alignments for each domain:
== domain 1 score: 19.7 bits; conditional E-value: 3.4e-07
TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---...TT-E CS
Met_10 100 egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir...eqla 169
+++vV+dv G G +++ +ak + akrv+ai+ + y + ++ Nk+++++k++ + +e++ ++++
tr|Q552E3|Q552E3_DICDI 46 QDKVVIDVGSGTGILSMFAAK-AGAKRVYAIEGSLMA-GYCSQLVQHNKLDSIIKVVHKRMEEITDeieDEKV 116
578*****************9.88999*****87655.7*******************999999853323333 PP
>> tr|Q54TL4|Q54TL4_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0204605 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.9 0.0 6.2e-07 0.00072 98 178 .. 356 437 .. 350 461 .. 0.81
Alignments for each domain:
== domain 1 score: 18.9 bits; conditional E-value: 6.2e-07
--TT-EEEETT-TTTCCHHHCC.HHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.TT-EEEEEE--TT CS
Met_10 98 veegevVvdvfAGiGpfaipia.kyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.eqladrvvmnlpk 178
+++e+V+d+ A G + ia + + +++a+d+n + +k l ni++ v++ + + + Dgr++ + +drv+ ++p
tr|Q54TL4|Q54TL4_DICDI 356 PQPNERVLDMCASPGGKTTYIAaMMKNTGTLVANDVNKDRIKSLVANIHRLGVKNCM-VSNLDGRQYPSvLSGFDRVLVDAPC 437
589*********9876655554044567899*************************9.7899****98866778999888775 PP
>> sp|Q54KI3|ANM5_DICDI Protein arginine N-methyltransferase 5 OS=Dictyostelium discoideum OX=44689 GN=prmt5 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 18.5 0.0 8.2e-07 0.00095 108 176 .. 363 435 .. 347 461 .. 0.81
Alignments for each domain:
== domain 1 score: 18.5 bits; conditional E-value: 8.2e-07
T-TTTCC...HHHCCHH.TTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEEE-- CS
Met_10 108 fAGiGpf...aipiaky.skakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvvmnl 176
AG Gp+ +i ++ k ++v+a+++nP+++ l++ i + e++v++i +D r+ +e ad +v +l
sp|Q54KI3|ANM5_DICDI 363 GAGRGPLvnsSIQASIEaNKFVKVFAVEKNPNAIVTLRNRIIMEGWEEIVTVIDSDMRDWNTEYRADIMVSEL 435
45666653334554433146789*************************************9999999887665 PP
>> tr|Q54PP5|Q54PP5_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0284401 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.4 0.0 1.8e-06 0.002 102 164 .. 52 113 .. 38 179 .. 0.80
Alignments for each domain:
== domain 1 score: 17.4 bits; conditional E-value: 1.8e-06
-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG-- CS
Met_10 102 evVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevi 164
+++dv AG Gp+++ a k+++ ++ d P+ ++ + + +k N++++ +++ +Dg+++
tr|Q54PP5|Q54PP5_DICDI 52 MTILDVAAGTGPLSLYGAEVYKNSKFITTDFSPKMIEIVDRLVKDNNIKN-IETHVMDGQNLE 113
5799************999999999***********************87.568889988764 PP
>> tr|Q54UI8|Q54UI8_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0203978 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.6 0.1 1.6e-06 0.0018 99 166 .. 48 118 .. 41 227 .. 0.87
Alignments for each domain:
== domain 1 score: 17.6 bits; conditional E-value: 1.6e-06
-TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-T.TCEEEEES-GGG---..T CS
Met_10 99 eegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkve.kvvkpileDgrevir..e 166
+e +++d+ AG+G ++ip+++ +++++a d + l+ i+ Nk + k vk++ Dg+++++ +
tr|Q54UI8|Q54UI8_DICDI 48 NEKIRILDIAAGVGNLTIPASRQFPNSEIVATDYSKCMIDSLNLIIEQNKNNiKNVKTLIVDGQNMVEieS 118
5555799****************************************9998757899******99986433 PP
>> tr|Q557I0|Q557I0_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0168191 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.9 0.0 5e-06 0.0058 13 152 .. 132 279 .. 125 307 .. 0.79
Alignments for each domain:
== domain 1 score: 15.9 bits; conditional E-value: 5e-06
EB-TTSSHHHHHHHHHHHHHSS-SCEEEE-S-SBTTTTB--EE...EEEES-.SEEEEEETTEEEEEET...TTS---GGGHHHHHH CS
Met_10 13 nlreelkeykkvigevildktkvktvlrkvsevegefRtfele...vlaGsdstetihkEngcrfklDv...skvyfsskleaErer 93
l+++ +++ + i+e +l+ t k+++ k s+ + ++ + l l ++t+ i +Eng++ +D+ + f + + r+
tr|Q557I0|Q557I0_DICDI 132 TLSDHWHPHVRYISEYLLNETGKKGIYWKISTKDQQMSKLYLGkgyELDEANQTTLIIEENGMKSYIDLldlKSTGFYLEHRDNRQI 218
5677788899999999999999999998888755555554443111344456688999*****987765111667788999999999 PP
HHTT--..TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTC CS
Met_10 94 laklve..egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekv 152
+ +l++ +g ++++fA f+i+ + +++ + + id + +k+ +n klN ++
tr|Q557I0|Q557I0_DICDI 219 ISNLFKgrNGGSILNLFAHTCSFSIAPCVNGHKIQTYNIDESIKNFKFADRNFKLNGLDTN 279
99997644799*****************99**************************98765 PP
>> sp|Q54EF2|ANM1_DICDI Protein arginine N-methyltransferase 1 OS=Dictyostelium discoideum OX=44689 GN=prmt1 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.1 0.1 4.5e-06 0.0053 98 175 .. 56 135 .. 40 162 .. 0.80
Alignments for each domain:
== domain 1 score: 16.1 bits; conditional E-value: 4.5e-06
--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.TT-EEEEE...E- CS
Met_10 98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.eqladrvv...mn 175
eg+vV+dv G G + + +a+ + ak+v+++d n e ++ i+ N+ +k+++ i++ +ev+ +++d ++ m+
sp|Q54EF2|ANM1_DICDI 56 LFEGKVVLDVGCGTGILCMFAAQ-AGAKMVIGVD-NSEMLPIAQKIITANNFDKTITLIKGKMEEVVLpVDKVDIIIsewMG 135
669*******************8.89999****9.8899999***********************98767777877633344 PP
>> tr|Q54UI9|Q54UI9_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0281053 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.7 0.0 1.2e-05 0.014 98 165 .. 46 112 .. 38 173 .. 0.88
Alignments for each domain:
== domain 1 score: 14.7 bits; conditional E-value: 1.2e-05
--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG--- CS
Met_10 98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir 165
++e+ ++dv AG G ++i ++ +++++a d+ + l+ i+ N++++v + +Dg+ + +
tr|Q54UI9|Q54UI9_DICDI 46 INENIKILDVGAGFGVLSIYASTNYPNSEIIATDISKCMIDSLNYSIQGNQIKNVT-AKVMDGQSMPE 112
7888899***************9999999***********************9977.88899998864 PP
>> tr|Q54VE3|Q54VE3_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB0205190 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.0 0.0 2e-05 0.023 97 157 .. 43 102 .. 32 115 .. 0.84
Alignments for each domain:
== domain 1 score: 14.0 bits; conditional E-value: 2e-05
T--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEE CS
Met_10 97 lveegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpil 157
++ ++vV+d+ G G i +ak+ + r ++ d+nPe +k +en k v++ v
tr|Q54VE3|Q54VE3_DICDI 43 SIDSDDVVLDLGCGDGRIVIYAAKHY-GIRGIGLDINPELIKSANENAKKEGVDHLVLFKV 102
467899*****************965.555789********************99994433 PP
>> tr|Q54FL8|Q54FL8_DICDI Uncharacterized protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0290773 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.6 0.2 5.1e-05 0.059 110 148 .. 37 74 .. 23 84 .. 0.89
Alignments for each domain:
== domain 1 score: 12.6 bits; conditional E-value: 5.1e-05
TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT CS
Met_10 110 GiGpfaipiakyskakrvlaidlnPesvkylkeniklNk 148
G G +++++k++ka v ++d+nP++v+ n k N+
tr|Q54FL8|Q54FL8_DICDI 37 GSGLISLSVSKFAKAT-VTGVDINPNAVNITFPNFKNNN 74
77899********998.***********99988888876 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (199 nodes)
Target sequences: 12739 (6856946 residues searched)
Passed MSV filter: 623 (0.0489049); expected 254.8 (0.02)
Passed bias filter: 233 (0.0182903); expected 254.8 (0.02)
Passed Vit filter: 30 (0.00235497); expected 12.7 (0.001)
Passed Fwd filter: 11 (0.00086349); expected 0.1 (1e-05)
Initial search space (Z): 12739 [actual number of targets]
Domain search space (domZ): 11 [number of targets reported over threshold]
# CPU time: 0.12u 0.01s 00:00:00.13 Elapsed: 00:00:00.05
# Mc/sec: 27290.65
//
[ok]