# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Met_10.hmm.txt
# target sequence database: proteomes/Natronomonas_moolapensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Met_10 [M=199]
Accession: PF02475.15
Description: Met-10+ like-protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
9.6e-56 186.0 0.0 1.4e-55 185.5 0.0 1.2 1 tr|M1Y3X8|M1Y3X8_NATM8 tRNA (Guanine(37)-N(1))-methyltransfe
1.6e-48 162.5 0.0 2e-48 162.1 0.0 1.1 1 tr|M1XN99|M1XN99_NATM8 tRNA(Phe) (4-demethylwyosine(37)-C(7)
0.0023 15.0 0.0 0.0037 14.4 0.0 1.3 1 tr|M1XS10|M1XS10_NATM8 Probable rRNA methyltransferase OS=Na
0.0029 14.7 0.0 0.0044 14.1 0.0 1.2 1 tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransfer
------ inclusion threshold ------
0.014 12.4 0.0 0.023 11.8 0.0 1.3 1 tr|M1Y5Q2|M1Y5Q2_NATM8 Probable cobalt-precorrin-6B C(15)-me
0.024 11.7 0.0 0.05 10.7 0.0 1.5 1 tr|M1XP07|M1XP07_NATM8 Probable S-adenosylmethionine-depende
Domain annotation for each sequence (and alignments):
>> tr|M1Y3X8|M1Y3X8_NATM8 tRNA (Guanine(37)-N(1))-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 185.5 0.0 3e-58 1.4e-55 2 199 .] 81 275 .. 80 275 .. 0.97
Alignments for each domain:
== domain 1 score: 185.5 bits; conditional E-value: 3e-58
EEEEETTEEEEEB-TTSSHHHHHHHHHHHHHS.S-SCEEEE-S-SBTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS---GGG CS
Met_10 2 kfeiiGdvvilnlreelkeykkvigevildkt.kvktvlrkvsevegefRtfelevlaGsdstetihkEngcrfklDvskvyfsskl 87
++e+ Gd++i++ +++ + ++ i+e++l+ + +tv+++ s +ege+R+++ vl G++ tet+h+E+gc+f+lD++++yfs++l
tr|M1Y3X8|M1Y3X8_NATM8 81 SYERLGDIAIVDEDDDER--ARRIAEAVLESDlPARTVVNRASPIEGELRVRQWDVLGGDG-TETVHREHGCEFELDIAEMYFSPRL 164
699*******98776655..599************************************99.************************* PP
HHHHHHHHTT--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.TT-EEEEE CS
Met_10 88 eaErerlaklveegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.eqladrvv 173
++Er+r++ ve +e+V d+fAG+Gpf +p+ak ++ + +++dln ++v+yl++n ++N v+++v +i++D+r+v+ ++ adr+v
tr|M1Y3X8|M1Y3X8_NATM8 165 ATERHRVVGGVERDERVFDMFAGVGPFIVPAAK--RGAECVGVDLNEAAVEYLRRNAERNGVSDRVIAINADVRDVTGyDDWADRIV 249
*********************************..99999*************************************999******* PP
E--TTTGGGGHHHHHHHEEEEEEEEE CS
Met_10 174 mnlpksaieFldkvlaalkdggvihy 199
mnlp+sa Fld++++ + + + hy
tr|M1Y3X8|M1Y3X8_NATM8 250 MNLPHSADGFLDTAVELAGEDCLLHY 275
****************9999999998 PP
>> tr|M1XN99|M1XN99_NATM8 tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase OS=Natronomonas moolapen
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 162.1 0.0 4.5e-51 2e-48 2 198 .. 91 288 .. 90 289 .. 0.92
Alignments for each domain:
== domain 1 score: 162.1 bits; conditional E-value: 4.5e-51
EEEEETTEEEEEB......-TTSSHHHHHHHHHHHHHS.S-SCEEEE-S-SBTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS CS
Met_10 2 kfeiiGdvvilnl......reelkeykkvigevildkt.kvktvlrkvsevegefRtfelevlaGsdstetihkEngcrfklDvskv 81
++++iGdvv+++ r+ + +++ige++l+++ + tvl + + +g+ R + v+aGs++tet+h+E+g+++ lD+s+
tr|M1XN99|M1XN99_NATM8 91 SWAVIGDVVLVDFgdvsaaRTLDRGSRETIGEALLEVHgDADTVLARGGI-SGTRRDPAGAVVAGSGDTETVHTEHGIEYALDLSET 176
799*******986222211333445899**********999**9998776.************************************ PP
---GGGHHHHHHHHTT--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT- CS
Met_10 82 yfsskleaErerlaklveegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireql 168
+fs++++aEr+r+ +v+ ge+V d+fAGiG+f++p+a+ + v a +++P++ + l en ++N v+ +v+++l+D+r v e++
tr|M1XN99|M1XN99_NATM8 177 MFSPGNKAERARMGDVVSAGERVFDMFAGIGYFSLPMAR--AEASVTAAEIDPTAHRRLVENARRNGVAARVEAVLGDCRSV--ETA 259
**************************************9..6667*************************************..69* PP
EEEEEE--TTTGGGGHHHHHHHEEEEEEEE CS
Met_10 169 adrvvmnlpksaieFldkvlaalkdggvih 198
adrv+m++ a+e+ld++l+a+ ggv+h
tr|M1XN99|M1XN99_NATM8 260 ADRVLMGYY-DAHEYLDSALEAVVSGGVVH 288
********8.8*****************99 PP
>> tr|M1XS10|M1XS10_NATM8 Probable rRNA methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.4 0.0 8.2e-06 0.0037 100 177 .. 54 131 .. 43 141 .. 0.87
Alignments for each domain:
== domain 1 score: 14.4 bits; conditional E-value: 8.2e-06
TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.TT-EEEEEE--T CS
Met_10 100 egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.eqladrvvmnlp 177
eg +V+d+ G G +a+ +a ++ v+++d++P+ +en ++ v+ + +D+ ++ + v+mn p
tr|M1XS10|M1XS10_NATM8 54 EGRTVLDLGCGTGMLALGAAL-RGPELVVGVDIDPAPLSTARENERRVGAMTDVSWVRGDVTDLPLvPGGDATVLMNPP 131
7899****************6.77899*********************9999*********999874444446667765 PP
>> tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.1 0.0 9.8e-06 0.0044 96 152 .. 91 148 .. 83 192 .. 0.82
Alignments for each domain:
== domain 1 score: 14.1 bits; conditional E-value: 9.8e-06
TT--TT-EEEETT-TTTCCH.HHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTC CS
Met_10 96 klveegevVvdvfAGiGpfa.ipiakyskakrvlaidlnPesvkylkeniklNkvekv 152
+ + ge V+d+ G G+ +++ ++ rv+++d+ Pe +k + n N e+v
tr|M1XL08|M1XL08_NATM8 91 ASLNAGEAVLDLGSGAGFDCfLAAQEVGETGRVIGVDMTPEMIKKARANASQNGAENV 148
55789************855156667899************************98875 PP
>> tr|M1Y5Q2|M1Y5Q2_NATM8 Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) OS=Natronomonas moolap
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.8 0.0 5.2e-05 0.023 110 177 .. 41 127 .. 29 150 .. 0.82
Alignments for each domain:
== domain 1 score: 11.8 bits; conditional E-value: 5.2e-05
TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EE.......................EEE CS
Met_10 110 GiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqlad.......................rvv 173
G +i +a+ a rv ai+ Pe + ++n++ N +e v+ i++++ e + ++ ad rvv
tr|M1Y5Q2|M1Y5Q2_NATM8 41 CTGAVTIEAAR--LAGRVTAIERKPERLEATRKNLAANGIEG-VELIEGEAPEAL-PDDADalflggsrnyadvldhaaetgvdRVV 123
55777888888..8899***********************98.579999999998.6667768888888888899999999999999 PP
E--T CS
Met_10 174 mnlp 177
mn+
tr|M1Y5Q2|M1Y5Q2_NATM8 124 MNVS 127
9875 PP
>> tr|M1XP07|M1XP07_NATM8 Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltrans
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.7 0.0 0.00011 0.05 88 138 .. 25 76 .. 19 88 .. 0.90
Alignments for each domain:
== domain 1 score: 10.7 bits; conditional E-value: 0.00011
HHHHHHHHTT.--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHH CS
Met_10 88 eaErerlakl.veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvk 138
++ ++ la++ ve ge+V+d+ G G+ ++ ++a rv++ d Pe v+
tr|M1XP07|M1XP07_NATM8 25 HTAKHALARMpVEAGETVLDLGCGSGYAGRALREATDAARVYGLDGAPEMVR 76
56677899999***********************9************99775 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (199 nodes)
Target sequences: 2723 (809592 residues searched)
Passed MSV filter: 63 (0.0231362); expected 54.5 (0.02)
Passed bias filter: 54 (0.0198311); expected 54.5 (0.02)
Passed Vit filter: 14 (0.00514139); expected 2.7 (0.001)
Passed Fwd filter: 6 (0.00220345); expected 0.0 (1e-05)
Initial search space (Z): 2723 [actual number of targets]
Domain search space (domZ): 6 [number of targets reported over threshold]
# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01
# Mc/sec: 16110.88
//
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