# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Met_10.hmm.txt
# target sequence database: proteomes/Trichoplax_adhaerens.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Met_10 [M=199]
Accession: PF02475.15
Description: Met-10+ like-protein
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
3.9e-67 225.2 0.0 5.9e-67 224.7 0.0 1.2 1 tr|B3SAB6|B3SAB6_TRIAD Uncharacterized protein (Fragment) OS
2.1e-30 105.3 0.0 2.9e-30 104.9 0.0 1.2 1 tr|B3RLP9|B3RLP9_TRIAD Uncharacterized protein (Fragment) OS
1.1e-08 34.4 0.0 2.1e-08 33.5 0.0 1.4 1 tr|B3RPX0|B3RPX0_TRIAD tRNA (guanine(26)-N(2))-dimethyltrans
2.6e-07 30.0 0.0 4.4e-07 29.2 0.0 1.4 1 tr|B3S2Q2|B3S2Q2_TRIAD Uncharacterized protein OS=Trichoplax
6.9e-06 25.3 0.0 1e-05 24.8 0.0 1.2 1 tr|B3RQF2|B3RQF2_TRIAD Uncharacterized protein OS=Trichoplax
1.8e-05 23.9 0.1 3.2e-05 23.1 0.1 1.3 1 tr|B3RZP1|B3RZP1_TRIAD Uncharacterized protein OS=Trichoplax
0.0012 18.0 0.1 0.0097 15.0 0.0 2.0 2 tr|B3S2L1|B3S2L1_TRIAD Uncharacterized protein (Fragment) OS
0.0049 16.0 0.1 0.013 14.6 0.0 1.6 2 tr|B3S4V8|B3S4V8_TRIAD rRNA adenine N(6)-methyltransferase O
0.007 15.5 0.1 0.011 14.9 0.1 1.2 1 tr|B3S8A4|B3S8A4_TRIAD Uncharacterized protein OS=Trichoplax
0.0075 15.4 0.0 0.012 14.7 0.0 1.2 1 tr|B3S6M9|B3S6M9_TRIAD Protein arginine N-methyltransferase
------ inclusion threshold ------
0.025 13.7 0.1 0.092 11.9 0.0 2.0 2 tr|B3RVA6|B3RVA6_TRIAD Protein arginine N-methyltransferase
Domain annotation for each sequence (and alignments):
>> tr|B3SAB6|B3SAB6_TRIAD Uncharacterized protein (Fragment) OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_2329 PE=3 S
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 224.7 0.0 5.6e-70 5.9e-67 1 194 [. 120 329 .. 120 350 .. 0.94
Alignments for each domain:
== domain 1 score: 224.7 bits; conditional E-value: 5.6e-70
SEEEEETTEEEEEB-TTSSHHHHHHHHHHHHHS.S-SCEEEE-S-SBTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS---GG CS
Met_10 1 tkfeiiGdvvilnlreelkeykkvigevildkt.kvktvlrkvsevegefRtfelevlaGsdstetihkEngcrfklDvskvyfssk 86
t+fe +G++++lnlr +++ykk+ig+vildk+ ++ktv++k+se++ +fR+++le+laG+d ++t +kEn c+f++D+skvy++s+
tr|B3SAB6|B3SAB6_TRIAD 120 TSFESVGQIAHLNLRPPMQNYKKLIGQVILDKNpHLKTVVNKTSEIDNQFRVAPLEILAGDDCMITTVKENECQFRFDYSKVYWNSR 206
58************************************************************************************* PP
GHHHHHHHHTT--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EE... CS
Met_10 87 leaErerlaklveegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqlad... 170
l++E++r++ l ++ +v+vdvfAG+Gpfaip+a+ k+ +v+a+dlnP+s+++l +n k Nk+ k +++ Dgr++i++ + d
tr|B3SAB6|B3SAB6_TRIAD 207 LHTEHRRIIDLLQPKQVIVDVFAGVGPFAIPAAR--KNCIVYANDLNPDSYHWLLHNSKTNKLGKQFYTFNLDGRDFIQQIVRDkii 291
**********************************..******************************************999999999 PP
..............EEEE--TTTGGGGHHHHHHHEEEE CS
Met_10 171 ..............rvvmnlpksaieFldkvlaalkdg 194
+++mnlp+saieFld k+
tr|B3SAB6|B3SAB6_TRIAD 292 negttesknllvinHIIMNLPASAIEFLDVFRGLYKNS 329
****************************9866666555 PP
>> tr|B3RLP9|B3RLP9_TRIAD Uncharacterized protein (Fragment) OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_18638 PE=4
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 104.9 0.0 2.7e-33 2.9e-30 35 177 .. 137 278 .. 100 303 .. 0.89
Alignments for each domain:
== domain 1 score: 104.9 bits; conditional E-value: 2.7e-33
-SCEEEE-S-SBTTTTB--EEEEEES-.SEEEEEETTEEEEEETTTS---GGGHHHHHHHHTT--TT-EEEETT-TTTCCHHHCCHH CS
Met_10 35 vktvlrkvsevegefRtfelevlaGsdstetihkEngcrfklDvskvyfsskleaErerlaklveegevVvdvfAGiGpfaipiaky 121
k + ++ ++ + Rt+++e+l G+ + + h +ng+++ +D++k +fs+++++E+ r+ + e++vd++AGiG+f +p +
tr|B3RLP9|B3RLP9_TRIAD 137 AKRLAKNSAILNDNHRTPNVEMLLGDC-SWVTHMDNGIKYTFDITKCMFSPGNITEKIRISNFDCSEEIIVDLYAGIGYFVLPYLIH 222
55555666666999***********99.9999******************************************************* PP
TTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEEE--T CS
Met_10 122 skakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvvmnlp 177
+kak+v a + nP++v+ l++ + lNkv ++ +++ +D+r+ +++ +adrv ++l
tr|B3RLP9|B3RLP9_TRIAD 223 AKAKFVHACEWNPHAVEALEKSLILNKVREKCTVYFGDNRQHAPKFIADRVNLGLL 278
**************************************************988876 PP
>> tr|B3RPX0|B3RPX0_TRIAD tRNA (guanine(26)-N(2))-dimethyltransferase OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_53
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 33.5 0.0 2e-11 2.1e-08 93 198 .. 55 167 .. 47 168 .. 0.74
Alignments for each domain:
== domain 1 score: 33.5 bits; conditional E-value: 2e-11
HHHTT--TT-EEEETT-TTTCCHHHCC.HHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---...TT-EE...EE CS
Met_10 93 rlaklveegevVvdvfAGiGpfaipia.kyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir...eqlad...rv 172
l + ve+g ++ + + G +i a + k k v+a+d nP+s+k +++ni+ Nk+ +vv+p +D+r ++ + +d +v
tr|B3RPX0|B3RPX0_TRIAD 55 NLSAAVEKGFTIFEGLSATGLRSIRYAlELPKIKAVIANDNNPSSFKCIERNIEYNKIGHVVQPHFGDARMMMYdnsN-SLDdqfQV 140
55566666666666666667777765524568899***********************************99976642.33344433 PP
E.E--TTTGGGGHHHHHHHEEEEEEEE CS
Met_10 173 v.mnlpksaieFldkvlaalkdggvih 198
v ++ s Fld++++ + dgg+ +
tr|B3RPX0|B3RPX0_TRIAD 141 VdIDPYGSPAIFLDAAVQSVSDGGLLC 167
314455677789999999999999887 PP
>> tr|B3S2Q2|B3S2Q2_TRIAD Uncharacterized protein OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_58107 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 29.2 0.0 4.2e-10 4.4e-07 102 184 .. 563 643 .. 546 714 .. 0.89
Alignments for each domain:
== domain 1 score: 29.2 bits; conditional E-value: 4.2e-10
-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEEE--TTTGGGGH CS
Met_10 102 evVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvvmnlpksaieFl 184
+++d f G+G i ak v+aid++P+ +k ++n k +ve++++ i +D +++++ +ad v + p +l
tr|B3S2Q2|B3S2Q2_TRIAD 563 SIIIDAFCGVGGNCIQFAK--TCDHVIAIDIDPNKIKCARHNAKIYNVEHKIEFIVGDFLQLAPSLKADVVFLSPPWGGPTYL 643
5799***************..77789*************************************99999987776665555555 PP
>> tr|B3RQF2|B3RQF2_TRIAD Uncharacterized protein OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_54966 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 24.8 0.0 9.5e-09 1e-05 100 180 .. 49 129 .. 41 151 .. 0.86
Alignments for each domain:
== domain 1 score: 24.8 bits; conditional E-value: 9.5e-09
TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTC..EEEEES-GGG---TT-EEEEEE--TTTG CS
Met_10 100 egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekv..vkpileDgrevireqladrvvmnlpksa 180
+g++V+d+ G G +++ a +a+ +++id++ ++ ++ni+ ++e+v +k+ +D++ + +++d v+mn p +
tr|B3RQF2|B3RQF2_TRIAD 49 QGKLVCDLGCGCGVLSVGTAM-LDASLIVGIDIDDDALMIARRNIEEFELENVqlIKANISDTEFFG-GKIFDTVIMNPPFGT 129
699*****************7.89999*******************999997544999999998885.99********88655 PP
>> tr|B3RZP1|B3RZP1_TRIAD Uncharacterized protein OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_26585 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 23.1 0.1 3.1e-08 3.2e-05 95 184 .. 156 246 .. 151 264 .. 0.82
Alignments for each domain:
== domain 1 score: 23.1 bits; conditional E-value: 3.1e-08
HTT--TT-EEEETT-TTTCCH.HHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.TT-EEEEEE--TTT CS
Met_10 95 aklveegevVvdvfAGiGpfa.ipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.eqladrvvmnlpks 179
a ++++e V+d+ G + +a + + +++a+d+n e k l+ ni++ v +++ + e gr++ + +drv++++p s
tr|B3RZP1|B3RZP1_TRIAD 156 ALAAQPNEKVLDMCSAPGGKTtYIAALMKNTGMIVANDVNKERCKALTANIHRLGVVNTI-VCSENGRQFPKiVGGFDRVLLDAPCS 241
55689********97665544044455567889*********************999999.88999****999999******99987 PP
GGGGH CS
Met_10 180 aieFl 184
+ +
tr|B3RZP1|B3RZP1_TRIAD 242 GTGVI 246
66655 PP
>> tr|B3S2L1|B3S2L1_TRIAD Uncharacterized protein (Fragment) OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_1535 PE=3 S
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.0 0.0 9.3e-06 0.0097 100 183 .. 50 134 .. 34 151 .. 0.78
2 ? 0.4 0.0 0.28 3e+02 5 40 .. 295 332 .. 292 343 .. 0.67
Alignments for each domain:
== domain 1 score: 15.0 bits; conditional E-value: 9.3e-06
TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEE...E--TTTGGGG CS
Met_10 100 egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvv...mnlpksaieF 183
+++vV+dv AG G ++ + + + a++v+a++ +++ ++ i+ N+++ +++ +++ +e+ ++ +d ++ m+++ +
tr|B3S2L1|B3S2L1_TRIAD 50 QNKVVLDVGAGSGILSFFAVQ-AGARKVYAVEASSIAIH-AENLIHSNQLSPKIQIVKGRIEEIEIPEPIDMIIsepMGYMLFNERM 134
699**********99987776.88999*****9877776.46669*********999999999988888887775555555555555 PP
== domain 2 score: 0.4 bits; conditional E-value: 0.28
EETTEE..EEEB-.TTSSHHHHHHHHHHHHHSS-SCEEE CS
Met_10 5 iiGdvv..ilnlr.eelkeykkvigevildktkvktvlr 40
++Gdv+ ++ + + + y+ +i v l+ t vktv +
tr|B3S2L1|B3S2L1_TRIAD 295 RAGDVItgHISMVaNTRQSYDVEIMTV-LQSTGVKTVAE 332
566666333333303445699999987.99999**9976 PP
>> tr|B3S4V8|B3S4V8_TRIAD rRNA adenine N(6)-methyltransferase OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_29342 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.6 0.0 1.2e-05 0.013 98 178 .. 21 98 .. 13 111 .. 0.86
2 ? -1.8 0.1 1.4 1.4e+03 21 47 .. 229 255 .. 207 264 .. 0.54
Alignments for each domain:
== domain 1 score: 14.6 bits; conditional E-value: 1.2e-05
--TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEEE--TT CS
Met_10 98 veegevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvvmnlpk 178
++ ++V+++ G G +++ + + kak+v+a +++P+ l++ ++ v+ +++ i +D+ + +d v nlp+
tr|B3S4V8|B3S4V8_TRIAD 21 IRSTDTVLEIGPGTGNLTVKLLQ--KAKKVIACEVDPRLAAELQKRVQGSPVSTKLHIIVGDVLKTE-LPYFDVCVANLPY 98
56778999999********9998..*************************************98875.5567777777775 PP
== domain 2 score: -1.8 bits; conditional E-value: 1.4
HHHHHHHHHHHHSS-SCEEEE-S-SBT CS
Met_10 21 ykkvigevildktkvktvlrkvseveg 47
+++ i e i +kv t+l+ v+ +
tr|B3S4V8|B3S4V8_TRIAD 229 HNQAIEEDINIAEKVDTILKSVNANAR 255
555566665555566666666655333 PP
>> tr|B3S8A4|B3S8A4_TRIAD Uncharacterized protein OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_60467 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.9 0.1 1e-05 0.011 100 179 .. 27 104 .. 2 127 .. 0.77
Alignments for each domain:
== domain 1 score: 14.9 bits; conditional E-value: 1e-05
TT-EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEEE--TTT CS
Met_10 100 egevVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvvmnlpks 179
++vV+dv AG G ++ + + a++v+a++ + + k ++ N+ ++++++i+ ++++ ++++d +v + + +
tr|B3S8A4|B3S8A4_TRIAD 27 RNKVVLDVGAGTGILSHFCVE-AGARKVYAVEASAIAEQAKKVAL-ANNAQDKISVINDLVENIELPEKVDVIVSEWMGY 104
589**********99988876.78999*****9988877655554.5788999999999999998899999888665554 PP
>> tr|B3S6M9|B3S6M9_TRIAD Protein arginine N-methyltransferase OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_59862 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 14.7 0.0 1.2e-05 0.012 103 177 .. 340 417 .. 336 443 .. 0.77
Alignments for each domain:
== domain 1 score: 14.7 bits; conditional E-value: 1.2e-05
EEEETT-TTTCCHHHCCH..HT..TSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---TT-EEEEEE--T CS
Met_10 103 vVvdvfAGiGpfaipiak..ys..kakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevireqladrvvmnlp 177
vV+ + AG Gp+ + + ys + +v+ai++nP++v l +n+k + + v+++ +D re ++++ad +v +l
tr|B3S6M9|B3S6M9_TRIAD 340 VVMVLGAGRGPLVKATLRagYSlqTKLTVYAIEKNPNAVITL-QNLKAVEWGDQVTVVSTDMREWEPPCKADIIVSELL 417
5666667777764333221133214567***********888.599999999********************9987765 PP
>> tr|B3RVA6|B3RVA6_TRIAD Protein arginine N-methyltransferase OS=Trichoplax adhaerens OX=10228 GN=TRIADDRAFT_55586 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.9 0.0 8.8e-05 0.092 103 177 .. 70 148 .. 30 167 .. 0.85
2 ? -2.7 0.0 2.5 2.6e+03 137 156 .. 189 208 .. 181 219 .. 0.78
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 8.8e-05
EEEETT-TTTCCHHHCCHHTTSSEEEEEES-HHHHHHHHHHHHHTT-TTCEEEEES-GGG---.....TT-EEEEEE--T CS
Met_10 103 vVvdvfAGiGpfaipiakyskakrvlaidlnPesvkylkeniklNkvekvvkpileDgrevir.....eqladrvvmnlp 177
V+d+ G G +a+ +a+ + ak+++a + ++ ++ i+ N+ ++ +k i++ + ++ ++ad +vm++
tr|B3RVA6|B3RVA6_TRIAD 70 NVLDIGTGTGLLALMAAR-AGAKKIYACEAFQPMAQLAQKIITENRYQDNIKIIQKRSTSMTAdddmdGCKADLIVMEIF 148
699**************9.88899****987667799*****************99999998844333445668888765 PP
== domain 2 score: -2.7 bits; conditional E-value: 2.5
HHHHHHHHHHTT-TTCEEEE CS
Met_10 137 vkylkeniklNkvekvvkpi 156
k+l++ +lN v++ +++
tr|B3RVA6|B3RVA6_TRIAD 189 SKFLQKCCNLNPVKSQMSVR 208
589999*****999887654 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (199 nodes)
Target sequences: 11518 (5222075 residues searched)
Passed MSV filter: 435 (0.037767); expected 230.4 (0.02)
Passed bias filter: 293 (0.0254384); expected 230.4 (0.02)
Passed Vit filter: 41 (0.00355965); expected 11.5 (0.001)
Passed Fwd filter: 11 (0.000955027); expected 0.1 (1e-05)
Initial search space (Z): 11518 [actual number of targets]
Domain search space (domZ): 11 [number of targets reported over threshold]
# CPU time: 0.09u 0.01s 00:00:00.10 Elapsed: 00:00:00.04
# Mc/sec: 25979.82
//
[ok]