# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database: proteomes/Anolis_carolinensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltr_RsmB-F [M=200]
Accession: PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.3e-81 270.5 0.0 1.5e-80 269.6 0.0 1.4 1 tr|H9GBE5|H9GBE5_ANOCA Uncharacterized protein OS=Anolis car
1.1e-39 136.3 0.0 2.3e-38 131.9 0.0 2.3 1 tr|G1K8Q2|G1K8Q2_ANOCA NOP2/Sun RNA methyltransferase family
5e-34 117.7 0.0 6.9e-34 117.3 0.0 1.2 1 tr|H9G3D0|H9G3D0_ANOCA Uncharacterized protein OS=Anolis car
2.4e-33 115.5 0.0 3.3e-33 115.1 0.0 1.3 1 tr|G1KY28|G1KY28_ANOCA NOP2/Sun RNA methyltransferase family
8.2e-31 107.2 0.0 1.2e-30 106.8 0.0 1.2 1 tr|G1KAB5|G1KAB5_ANOCA NOP2/Sun RNA methyltransferase family
9.9e-27 93.9 0.1 2e-26 93.0 0.0 1.5 2 tr|G1K8I3|G1K8I3_ANOCA NOP2/Sun RNA methyltransferase family
4.5e-09 36.3 1.5 6.2e-09 35.8 0.1 1.9 2 tr|G1KLL8|G1KLL8_ANOCA NOP2/Sun RNA methyltransferase family
------ inclusion threshold ------
0.061 13.0 0.0 0.13 11.9 0.0 1.5 1 tr|H9GNL4|H9GNL4_ANOCA Uncharacterized protein OS=Anolis car
0.14 11.8 0.0 5.2 6.7 0.0 2.1 2 tr|R4G9E3|R4G9E3_ANOCA Arsenite methyltransferase OS=Anolis
0.16 11.7 0.0 0.25 11.0 0.0 1.3 1 tr|R4GBY7|R4GBY7_ANOCA tRNA (adenine(58)-N(1))-methyltransfe
Domain annotation for each sequence (and alignments):
>> tr|H9GBE5|H9GBE5_ANOCA Uncharacterized protein OS=Anolis carolinensis OX=28377 GN=nop2 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 269.6 0.0 8e-84 1.5e-80 1 200 [] 373 581 .. 373 581 .. 0.94
Alignments for each domain:
== domain 1 score: 269.6 bits; conditional E-value: 8e-84
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87
+++Lapqe+e+ilD+c+aPGgKT++ia+lmkn+g+++A+d n+ Rl++v+ nl+rLgvtnt v++ D+r+++kvlgg fDr+LlDa
tr|H9GBE5|H9GBE5_ANOCA 373 VMALAPQENERILDMCCAPGGKTSYIAQLMKNTGVILANDSNADRLHSVVGNLHRLGVTNTVVSHCDGRQFPKVLGG--FDRVLLDA 457
589*************************************************************************9..******** PP
--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTS CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsep 170
PCsgtgvi++dp vk++++ekdi ++a+lqkel+ +aid++ +gG++vY+TCsv veEne+v+++aLkkr +v+lv+t l
tr|H9GBE5|H9GBE5_ANOCA 458 PCSGTGVISKDPTVKTNKDEKDILRCAHLQKELILSAIDSVnaasETGGYIVYCTCSVMVEENEWVVDYALKKR-NVRLVPTGLDF- 542
*****************************************999999**************************9.9******6543. PP
TTSSECEEC..............T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 171 kglklgeea..............gtlrllPhtenkdgffiaklk 200
g+e +t+r++Pht+n+dgff+aklk
tr|H9GBE5|H9GBE5_ANOCA 543 -----GKEGftrfkerrfhpslkSTRRFYPHTHNMDGFFVAKLK 581
.....3333333445689************************96 PP
>> tr|G1K8Q2|G1K8Q2_ANOCA NOP2/Sun RNA methyltransferase family member 2 OS=Anolis carolinensis OX=28377 GN=NSUN2 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 131.9 0.0 1.2e-41 2.3e-38 2 199 .. 196 453 .. 195 454 .. 0.87
Alignments for each domain:
== domain 1 score: 131.9 bits; conditional E-value: 1.2e-41
HHH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.... CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.... 77
llL+ q++ +ilD+caaPG+KT+ + e+++ ++g v+A+d++++R +++ krL+ ++ v + Da+ i++
tr|G1K8Q2|G1K8Q2_ANOCA 196 LLLNVQPHHKILDMCAAPGSKTAQLIEMLHadmnvpfPEGFVIANDVDNKRCYLLVHQAKRLNSPSILVANHDASSIPNLQITtngk 282
589***********************9976222233347889**********************************99876555678 PP
...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT.E CS
Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred.v 160
++DriL D+PCsg g++r++ dv + + ++ ql+ lq ++ + +++l +gG +vYsTCs+++ Ene+vi+++L+k e
tr|G1K8Q2|G1K8Q2_ANOCA 283 keiLFYDRILCDVPCSGDGTMRKNIDVWKKWTTQNSLQLHGLQLRIATRGVEQLAEGGRMVYSTCSLNPIENEAVIASLLEKSEGaL 369
987789*********************777789999********************************************9987414 PP
EEESSBSTTSTTSSECEEC..............................................T-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 161 elvetelsepkglklgeea..............................................gtlrllPhtenkdgffiakl 199
el ++ se glk + lr+lPh++n+ gff+a l
tr|G1K8Q2|G1K8Q2_ANOCA 370 ELADV-SSELPGLKRMPGItkwkvmtkdgqwfedwkevpsnrqtqirptmfplkdeeklkalnleRCLRILPHHQNTGGFFVAVL 453
66665.333333333222245889999************************************9999***************987 PP
>> tr|H9G3D0|H9G3D0_ANOCA Uncharacterized protein OS=Anolis carolinensis OX=28377 GN=nsun5 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 117.3 0.0 3.7e-37 6.9e-34 2 199 .. 220 421 .. 219 422 .. 0.86
Alignments for each domain:
== domain 1 score: 117.3 bits; conditional E-value: 3.7e-37
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDa 87
lL+p ++ ++lD+caaPG KT+h+a++m nkg+++A d +++Rl + + l r gvt + + D +d + ++++ iLlD
tr|H9G3D0|H9G3D0_ANOCA 220 FLLNPTPGSHVLDACAAPGNKTSHLAAIMGNKGRIFAFDLDAKRLATMSTMLARAGVTCHNLAHQDFLATDPGDPKySHVEYILLDP 306
68****************************************************************9888654443589******** PP
--CCGGGTTT-TTHHHH.-CC.HHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-.TTEEEESS.BSTTST CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkek.diaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr.edvelvet.elsepk 171
Csg g++ r p +r ++ +++la q+++l a++ + lvYsTCs++ eEneev+ ++L+++ d +lve + p+
tr|H9G3D0|H9G3D0_ANOCA 307 SCSGSGIVGRLPYEEEERMDAqRLQALAGFQRRMLGHALKF-PALRRLVYSTCSLHQEENEEVVRDVLEQHgRDFRLVEAlPSWTPR 392
************98888876516889999******998764.34457*********************9995588998752556677 PP
TSSECEEC.T-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 172 glklgeea.gtlrllPhtenkdgffiakl 199
gl + ea lr P++ ++gff+a +
tr|H9G3D0|H9G3D0_ANOCA 393 GLGVFAEAkCCLRASPKETLTNGFFVAVM 421
776654443899**************975 PP
>> tr|G1KY28|G1KY28_ANOCA NOP2/Sun RNA methyltransferase family member 6 OS=Anolis carolinensis OX=28377 GN=NSUN6 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 115.1 0.0 1.8e-36 3.3e-33 2 153 .. 202 364 .. 201 442 .. 0.89
Alignments for each domain:
== domain 1 score: 115.1 bits; conditional E-value: 1.8e-36
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC........... CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg........... 77
++L+pq++e+ilD+caaPGgKTth+a lm+++g+v+A+d+ + ++k++++n + L ++ ++ +++D++k +++
tr|G1KY28|G1KY28_ANOCA 202 YVLNPQPGERILDMCAAPGGKTTHLATLMHDEGEVIALDKIADKVKKIKQNASSLKLNCIKTFCYDGTKALEISKRadgqegppfvp 288
68******************************************************************9977766677899****** PP
--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEE...S---CTCTHHHHHHH CS
Methyltr_RsmB-F 78 elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsT...CsvlveEneevieea 153
e fDriLlDaPCsg+g ++p++ ++ + k++++++ lq++l+s ++l + +++Ys C ++ +E + ++ +
tr|G1KY28|G1KY28_ANOCA 289 ESFDRILLDAPCSGMG---QRPNMAFSWSLKEVTSYQPLQRRLFSVNKQTLETSTIMIYSAvfsCVLESAEPKYLLDWI 364
**************98...68999999999*****************************95444888877776666654 PP
>> tr|G1KAB5|G1KAB5_ANOCA NOP2/Sun RNA methyltransferase family member 4 OS=Anolis carolinensis OX=28377 GN=NSUN4 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 106.8 0.0 6.3e-34 1.2e-30 2 174 .. 166 342 .. 165 377 .. 0.83
Alignments for each domain:
== domain 1 score: 106.8 bits; conditional E-value: 6.3e-34
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHH.TT--...SEEEEES-CCCCHHHHCC--EEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkr.Lgvt...ntivleaDarkidkvlggelfDriL 84
l+L+ q+++ +lDlcaaPGgKT +++ + + A+d +++R++r+++ l+r L+++ + v++ D+rk + + ++fDr+L
tr|G1KAB5|G1KAB5_ANOCA 166 LALNIQPDDLVLDLCAAPGGKTLALLQT-GCCRGLAANDLSTSRTRRLNDILHRyLPQElqkVVRVTSWDGRKWGELET-STFDRVL 250
789************************9.888889******************96666533345677889999987777.69***** PP
EEE--CCGG..GTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTT CS
Methyltr_RsmB-F 85 lDaPCsgtg..virrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelse 169
+D+PC+ + d+++ +r ++ + ++l +lq ell a i k+gG +vYsTCs+ ne vie+a + + +e+++++
tr|G1KAB5|G1KAB5_ANOCA 251 VDVPCTNDRhsLREEDNNIFMRMRKGERQNLPRLQLELLVAGILAAKPGGEVVYSTCSLSQLQNEYVIERAVELMAIQYQIEVQVED 337
******9751145556778889999999******************************************99877666666666666 PP
STTSS CS
Methyltr_RsmB-F 170 pkglk 174
+ +
tr|G1KAB5|G1KAB5_ANOCA 338 LSYFR 342
54444 PP
>> tr|G1K8I3|G1K8I3_ANOCA NOP2/Sun RNA methyltransferase family member 3 OS=Anolis carolinensis OX=28377 GN=NSUN3 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.5 0.1 3.7 6.9e+03 149 165 .. 23 39 .. 15 56 .. 0.54
2 ! 93.0 0.0 1.1e-29 2e-26 2 160 .. 143 304 .. 142 325 .. 0.83
Alignments for each domain:
== domain 1 score: -3.5 bits; conditional E-value: 3.7
HHHHHHHH-TTEEEESS CS
Methyltr_RsmB-F 149 vieeaLkkredvelvet 165
++++ L+++++++l++
tr|G1K8I3|G1K8I3_ANOCA 23 AVKKKLESKPETKLQKQ 39
45555555555555443 PP
== domain 2 score: 93.0 bits; conditional E-value: 1.1e-29
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--....SEEEEES-CCCCHHHHCC--EEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt....ntivleaDarkidkvlggelfDriL 84
l+L+ +++e++lD+caaPGgK ++ + g + ++ ++ R ++++l+ + + + ++ D+++i + e fD++L
tr|G1K8I3|G1K8I3_ANOCA 143 LALEVENGEKVLDMCAAPGGKSIATLQC-AWPGLLHCNEYDHLRSLWLKQTLESFIPEsvmhAVAFSQLDGQQIGNLQP-EYFDKVL 227
689******************9777776.889*******************9998654222256677888888876666.6****** PP
EEE--CCGGGTTT-TTHHHH..-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTE CS
Methyltr_RsmB-F 85 lDaPCsgtgvirrdpdvklrr.kekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredv 160
+DaPCs d++ + ++ + l+ q +ll +a++ l++gG+lvYsTC++ +En+ vi ++L++ +v
tr|G1K8I3|G1K8I3_ANOCA 228 VDAPCSNDRSWLFSSDIQQAAlRLAQRKLLSAVQIQLLRSAVKALRPGGYLVYSTCTLSKAENSDVITHILNSCSNV 304
*******99998888886543144555668889**************************************998776 PP
>> tr|G1KLL8|G1KLL8_ANOCA NOP2/Sun RNA methyltransferase family member 7 OS=Anolis carolinensis OX=28377 GN=NSUN7 PE=3
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 35.8 0.1 3.3e-12 6.2e-09 24 157 .. 312 461 .. 298 485 .. 0.81
2 ? -3.7 0.1 4.2 7.9e+03 94 112 .. 637 655 .. 633 659 .. 0.79
Alignments for each domain:
== domain 1 score: 35.8 bits; conditional E-value: 3.3e-12
HHHHHH.TTTTSEEEEEES.SCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCGGG.......TTT-TT CS
Methyltr_RsmB-F 24 thiael.mknkgtvvAvda.nkeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgv.......irrdpd 100
+h+++l ++++++v+ + ++ + +++ ++ ++n+ +++ D +i+ + + +++ iLl Csg+gv ++ ++d
tr|G1KLL8|G1KLL8_ANOCA 312 AHMSALtNQQTSKVFVCGVkSTAKEAELKGLFAQMECKNIELIREDFANIEPTDNKlQKVKVILLLPRCSGLGVsnpiefiLNEHED 398
7999996667777776665155677899999*****************99887777688999999999*****74444444679999 PP
HHHH.-.......CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH- CS
Methyltr_RsmB-F 101 vklrrk.......ekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr 157
+ l+r+ e ++ la++q e l+ a++ k + +vY+TCsv +eEne v+++aL +
tr|G1KLL8|G1KLL8_ANOCA 399 AELLRDlsqgsvaEDKLNMLAQQQFEELTHAMQFAKVQ-AVVYCTCSVYPEENEVVVNKALTSG 461
99998544344436678889999999999999999987.689******************9865 PP
== domain 2 score: -3.7 bits; conditional E-value: 4.2
GTTT-TTHHHH.-CCHHCC CS
Methyltr_RsmB-F 94 virrdpdvklrrkekdiaq 112
+ +r+++++ +++e+ ++
tr|G1KLL8|G1KLL8_ANOCA 637 AFERQRNIRKSKQEERVMI 655
5689999999999998765 PP
>> tr|H9GNL4|H9GNL4_ANOCA Uncharacterized protein OS=Anolis carolinensis OX=28377 GN=fbl PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.9 0.0 7.2e-05 0.13 7 86 .. 148 226 .. 144 230 .. 0.74
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 7.2e-05
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEE CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlD 86
+++ ++l l aa G +h+++++ ++g v+Av+ +++ + +++ k+ tn+i + Dar+++k+ ++D i D
tr|H9GNL4|H9GNL4_ANOCA 148 KPGAKVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLINVAKK--RTNIIPVIEDARHPHKYRMLiGMVDVIFAD 226
566789999*************************987665555544433..345677888999998875433466666655 PP
>> tr|R4G9E3|R4G9E3_ANOCA Arsenite methyltransferase OS=Anolis carolinensis OX=28377 GN=AS3MT PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 6.7 0.0 0.0028 5.2 8 50 .. 67 109 .. 61 136 .. 0.86
2 ? 2.8 0.0 0.043 79 110 139 .. 154 187 .. 150 196 .. 0.82
Alignments for each domain:
== domain 1 score: 6.7 bits; conditional E-value: 0.0028
TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHH CS
Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrva 50
e+ +ilDl ++ G +++l+ ++g+++ +d+ + ++ +
tr|R4G9E3|R4G9E3_ANOCA 67 EDCWILDLGCGSGRDCYMLSQLVGENGHITGIDMTEAQVEVAK 109
5668*****************************9998776554 PP
== domain 2 score: 2.8 bits; conditional E-value: 0.043
HCCHHHHHHHHHHHHHHHEEEEEEE....EEEES CS
Methyltr_RsmB-F 110 iaqlaklqkellsaaidllkkgGvl....vYsTC 139
+++l+ ++++l+ a ++lk+gG + vY+ C
tr|R4G9E3|R4G9E3_ANOCA 154 VINLSPDKRAVLHEAYQMLKAGGEMyfsdVYANC 187
67788999***************99555566666 PP
>> tr|R4GBY7|R4GBY7_ANOCA tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Anolis carolinensis OX
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.0 0.0 0.00014 0.25 2 89 .. 97 184 .. 96 201 .. 0.84
Alignments for each domain:
== domain 1 score: 11.0 bits; conditional E-value: 0.00014
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--S.EEEEES-CCCCHHHHCC--EEEEEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtn.tivleaDarkidkvlggelfDriLlDa 87
++L+++++ + + ++ G+ i ++++g+++ v+ +++R+++ +e + v + ++v + D+ k ++ ++ D + lD
tr|R4GBY7|R4GBY7_ANOCA 97 MMLELKPGSIVCESGTGSGSLSHAIIRTIAPTGHLYTVEFHQQRAEKAIEEFREHKVDHlVTVKNQDVCKNGFGVT-DVADAVFLDI 182
67888888888888899999999999999**********************9999998626789999999977777.599******9 PP
-- CS
Methyltr_RsmB-F 88 PC 89
P
tr|R4GBY7|R4GBY7_ANOCA 183 PS 184
96 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (200 nodes)
Target sequences: 18528 (9796552 residues searched)
Passed MSV filter: 688 (0.037133); expected 370.6 (0.02)
Passed bias filter: 462 (0.0249352); expected 370.6 (0.02)
Passed Vit filter: 29 (0.0015652); expected 18.5 (0.001)
Passed Fwd filter: 10 (0.000539724); expected 0.2 (1e-05)
Initial search space (Z): 18528 [actual number of targets]
Domain search space (domZ): 10 [number of targets reported over threshold]
# CPU time: 0.18u 0.01s 00:00:00.19 Elapsed: 00:00:00.07
# Mc/sec: 27990.15
//
[ok]