# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt # target sequence database: proteomes/Anolis_carolinensis.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Methyltr_RsmB-F [M=200] Accession: PF01189.16 Description: 16S rRNA methyltransferase RsmB/F Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 8.3e-81 270.5 0.0 1.5e-80 269.6 0.0 1.4 1 tr|H9GBE5|H9GBE5_ANOCA Uncharacterized protein OS=Anolis car 1.1e-39 136.3 0.0 2.3e-38 131.9 0.0 2.3 1 tr|G1K8Q2|G1K8Q2_ANOCA NOP2/Sun RNA methyltransferase family 5e-34 117.7 0.0 6.9e-34 117.3 0.0 1.2 1 tr|H9G3D0|H9G3D0_ANOCA Uncharacterized protein OS=Anolis car 2.4e-33 115.5 0.0 3.3e-33 115.1 0.0 1.3 1 tr|G1KY28|G1KY28_ANOCA NOP2/Sun RNA methyltransferase family 8.2e-31 107.2 0.0 1.2e-30 106.8 0.0 1.2 1 tr|G1KAB5|G1KAB5_ANOCA NOP2/Sun RNA methyltransferase family 9.9e-27 93.9 0.1 2e-26 93.0 0.0 1.5 2 tr|G1K8I3|G1K8I3_ANOCA NOP2/Sun RNA methyltransferase family 4.5e-09 36.3 1.5 6.2e-09 35.8 0.1 1.9 2 tr|G1KLL8|G1KLL8_ANOCA NOP2/Sun RNA methyltransferase family ------ inclusion threshold ------ 0.061 13.0 0.0 0.13 11.9 0.0 1.5 1 tr|H9GNL4|H9GNL4_ANOCA Uncharacterized protein OS=Anolis car 0.14 11.8 0.0 5.2 6.7 0.0 2.1 2 tr|R4G9E3|R4G9E3_ANOCA Arsenite methyltransferase OS=Anolis 0.16 11.7 0.0 0.25 11.0 0.0 1.3 1 tr|R4GBY7|R4GBY7_ANOCA tRNA (adenine(58)-N(1))-methyltransfe Domain annotation for each sequence (and alignments): >> tr|H9GBE5|H9GBE5_ANOCA Uncharacterized protein OS=Anolis carolinensis OX=28377 GN=nop2 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 269.6 0.0 8e-84 1.5e-80 1 200 [] 373 581 .. 373 581 .. 0.94 Alignments for each domain: == domain 1 score: 269.6 bits; conditional E-value: 8e-84 HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87 +++Lapqe+e+ilD+c+aPGgKT++ia+lmkn+g+++A+d n+ Rl++v+ nl+rLgvtnt v++ D+r+++kvlgg fDr+LlDa tr|H9GBE5|H9GBE5_ANOCA 373 VMALAPQENERILDMCCAPGGKTSYIAQLMKNTGVILANDSNADRLHSVVGNLHRLGVTNTVVSHCDGRQFPKVLGG--FDRVLLDA 457 589*************************************************************************9..******** PP --CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTS CS Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsep 170 PCsgtgvi++dp vk++++ekdi ++a+lqkel+ +aid++ +gG++vY+TCsv veEne+v+++aLkkr +v+lv+t l tr|H9GBE5|H9GBE5_ANOCA 458 PCSGTGVISKDPTVKTNKDEKDILRCAHLQKELILSAIDSVnaasETGGYIVYCTCSVMVEENEWVVDYALKKR-NVRLVPTGLDF- 542 *****************************************999999**************************9.9******6543. PP TTSSECEEC..............T-EEE-TTTTS.-SEEEEEEE CS Methyltr_RsmB-F 171 kglklgeea..............gtlrllPhtenkdgffiaklk 200 g+e +t+r++Pht+n+dgff+aklk tr|H9GBE5|H9GBE5_ANOCA 543 -----GKEGftrfkerrfhpslkSTRRFYPHTHNMDGFFVAKLK 581 .....3333333445689************************96 PP >> tr|G1K8Q2|G1K8Q2_ANOCA NOP2/Sun RNA methyltransferase family member 2 OS=Anolis carolinensis OX=28377 GN=NSUN2 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 131.9 0.0 1.2e-41 2.3e-38 2 199 .. 196 453 .. 195 454 .. 0.87 Alignments for each domain: == domain 1 score: 131.9 bits; conditional E-value: 1.2e-41 HHH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.... CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.... 77 llL+ q++ +ilD+caaPG+KT+ + e+++ ++g v+A+d++++R +++ krL+ ++ v + Da+ i++ tr|G1K8Q2|G1K8Q2_ANOCA 196 LLLNVQPHHKILDMCAAPGSKTAQLIEMLHadmnvpfPEGFVIANDVDNKRCYLLVHQAKRLNSPSILVANHDASSIPNLQITtngk 282 589***********************9976222233347889**********************************99876555678 PP ...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT.E CS Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred.v 160 ++DriL D+PCsg g++r++ dv + + ++ ql+ lq ++ + +++l +gG +vYsTCs+++ Ene+vi+++L+k e tr|G1K8Q2|G1K8Q2_ANOCA 283 keiLFYDRILCDVPCSGDGTMRKNIDVWKKWTTQNSLQLHGLQLRIATRGVEQLAEGGRMVYSTCSLNPIENEAVIASLLEKSEGaL 369 987789*********************777789999********************************************9987414 PP EEESSBSTTSTTSSECEEC..............................................T-EEE-TTTTS.-SEEEEEE CS Methyltr_RsmB-F 161 elvetelsepkglklgeea..............................................gtlrllPhtenkdgffiakl 199 el ++ se glk + lr+lPh++n+ gff+a l tr|G1K8Q2|G1K8Q2_ANOCA 370 ELADV-SSELPGLKRMPGItkwkvmtkdgqwfedwkevpsnrqtqirptmfplkdeeklkalnleRCLRILPHHQNTGGFFVAVL 453 66665.333333333222245889999************************************9999***************987 PP >> tr|H9G3D0|H9G3D0_ANOCA Uncharacterized protein OS=Anolis carolinensis OX=28377 GN=nsun5 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 117.3 0.0 3.7e-37 6.9e-34 2 199 .. 220 421 .. 219 422 .. 0.86 Alignments for each domain: == domain 1 score: 117.3 bits; conditional E-value: 3.7e-37 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDa 87 lL+p ++ ++lD+caaPG KT+h+a++m nkg+++A d +++Rl + + l r gvt + + D +d + ++++ iLlD tr|H9G3D0|H9G3D0_ANOCA 220 FLLNPTPGSHVLDACAAPGNKTSHLAAIMGNKGRIFAFDLDAKRLATMSTMLARAGVTCHNLAHQDFLATDPGDPKySHVEYILLDP 306 68****************************************************************9888654443589******** PP --CCGGGTTT-TTHHHH.-CC.HHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-.TTEEEESS.BSTTST CS Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkek.diaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr.edvelvet.elsepk 171 Csg g++ r p +r ++ +++la q+++l a++ + lvYsTCs++ eEneev+ ++L+++ d +lve + p+ tr|H9G3D0|H9G3D0_ANOCA 307 SCSGSGIVGRLPYEEEERMDAqRLQALAGFQRRMLGHALKF-PALRRLVYSTCSLHQEENEEVVRDVLEQHgRDFRLVEAlPSWTPR 392 ************98888876516889999******998764.34457*********************9995588998752556677 PP TSSECEEC.T-EEE-TTTTS.-SEEEEEE CS Methyltr_RsmB-F 172 glklgeea.gtlrllPhtenkdgffiakl 199 gl + ea lr P++ ++gff+a + tr|H9G3D0|H9G3D0_ANOCA 393 GLGVFAEAkCCLRASPKETLTNGFFVAVM 421 776654443899**************975 PP >> tr|G1KY28|G1KY28_ANOCA NOP2/Sun RNA methyltransferase family member 6 OS=Anolis carolinensis OX=28377 GN=NSUN6 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 115.1 0.0 1.8e-36 3.3e-33 2 153 .. 202 364 .. 201 442 .. 0.89 Alignments for each domain: == domain 1 score: 115.1 bits; conditional E-value: 1.8e-36 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC........... CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg........... 77 ++L+pq++e+ilD+caaPGgKTth+a lm+++g+v+A+d+ + ++k++++n + L ++ ++ +++D++k +++ tr|G1KY28|G1KY28_ANOCA 202 YVLNPQPGERILDMCAAPGGKTTHLATLMHDEGEVIALDKIADKVKKIKQNASSLKLNCIKTFCYDGTKALEISKRadgqegppfvp 288 68******************************************************************9977766677899****** PP --EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEE...S---CTCTHHHHHHH CS Methyltr_RsmB-F 78 elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsT...CsvlveEneevieea 153 e fDriLlDaPCsg+g ++p++ ++ + k++++++ lq++l+s ++l + +++Ys C ++ +E + ++ + tr|G1KY28|G1KY28_ANOCA 289 ESFDRILLDAPCSGMG---QRPNMAFSWSLKEVTSYQPLQRRLFSVNKQTLETSTIMIYSAvfsCVLESAEPKYLLDWI 364 **************98...68999999999*****************************95444888877776666654 PP >> tr|G1KAB5|G1KAB5_ANOCA NOP2/Sun RNA methyltransferase family member 4 OS=Anolis carolinensis OX=28377 GN=NSUN4 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 106.8 0.0 6.3e-34 1.2e-30 2 174 .. 166 342 .. 165 377 .. 0.83 Alignments for each domain: == domain 1 score: 106.8 bits; conditional E-value: 6.3e-34 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHH.TT--...SEEEEES-CCCCHHHHCC--EEEEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkr.Lgvt...ntivleaDarkidkvlggelfDriL 84 l+L+ q+++ +lDlcaaPGgKT +++ + + A+d +++R++r+++ l+r L+++ + v++ D+rk + + ++fDr+L tr|G1KAB5|G1KAB5_ANOCA 166 LALNIQPDDLVLDLCAAPGGKTLALLQT-GCCRGLAANDLSTSRTRRLNDILHRyLPQElqkVVRVTSWDGRKWGELET-STFDRVL 250 789************************9.888889******************96666533345677889999987777.69***** PP EEE--CCGG..GTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTT CS Methyltr_RsmB-F 85 lDaPCsgtg..virrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelse 169 +D+PC+ + d+++ +r ++ + ++l +lq ell a i k+gG +vYsTCs+ ne vie+a + + +e+++++ tr|G1KAB5|G1KAB5_ANOCA 251 VDVPCTNDRhsLREEDNNIFMRMRKGERQNLPRLQLELLVAGILAAKPGGEVVYSTCSLSQLQNEYVIERAVELMAIQYQIEVQVED 337 ******9751145556778889999999******************************************99877666666666666 PP STTSS CS Methyltr_RsmB-F 170 pkglk 174 + + tr|G1KAB5|G1KAB5_ANOCA 338 LSYFR 342 54444 PP >> tr|G1K8I3|G1K8I3_ANOCA NOP2/Sun RNA methyltransferase family member 3 OS=Anolis carolinensis OX=28377 GN=NSUN3 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -3.5 0.1 3.7 6.9e+03 149 165 .. 23 39 .. 15 56 .. 0.54 2 ! 93.0 0.0 1.1e-29 2e-26 2 160 .. 143 304 .. 142 325 .. 0.83 Alignments for each domain: == domain 1 score: -3.5 bits; conditional E-value: 3.7 HHHHHHHH-TTEEEESS CS Methyltr_RsmB-F 149 vieeaLkkredvelvet 165 ++++ L+++++++l++ tr|G1K8I3|G1K8I3_ANOCA 23 AVKKKLESKPETKLQKQ 39 45555555555555443 PP == domain 2 score: 93.0 bits; conditional E-value: 1.1e-29 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--....SEEEEES-CCCCHHHHCC--EEEEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt....ntivleaDarkidkvlggelfDriL 84 l+L+ +++e++lD+caaPGgK ++ + g + ++ ++ R ++++l+ + + + ++ D+++i + e fD++L tr|G1K8I3|G1K8I3_ANOCA 143 LALEVENGEKVLDMCAAPGGKSIATLQC-AWPGLLHCNEYDHLRSLWLKQTLESFIPEsvmhAVAFSQLDGQQIGNLQP-EYFDKVL 227 689******************9777776.889*******************9998654222256677888888876666.6****** PP EEE--CCGGGTTT-TTHHHH..-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTE CS Methyltr_RsmB-F 85 lDaPCsgtgvirrdpdvklrr.kekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredv 160 +DaPCs d++ + ++ + l+ q +ll +a++ l++gG+lvYsTC++ +En+ vi ++L++ +v tr|G1K8I3|G1K8I3_ANOCA 228 VDAPCSNDRSWLFSSDIQQAAlRLAQRKLLSAVQIQLLRSAVKALRPGGYLVYSTCTLSKAENSDVITHILNSCSNV 304 *******99998888886543144555668889**************************************998776 PP >> tr|G1KLL8|G1KLL8_ANOCA NOP2/Sun RNA methyltransferase family member 7 OS=Anolis carolinensis OX=28377 GN=NSUN7 PE=3 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.8 0.1 3.3e-12 6.2e-09 24 157 .. 312 461 .. 298 485 .. 0.81 2 ? -3.7 0.1 4.2 7.9e+03 94 112 .. 637 655 .. 633 659 .. 0.79 Alignments for each domain: == domain 1 score: 35.8 bits; conditional E-value: 3.3e-12 HHHHHH.TTTTSEEEEEES.SCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCGGG.......TTT-TT CS Methyltr_RsmB-F 24 thiael.mknkgtvvAvda.nkeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgv.......irrdpd 100 +h+++l ++++++v+ + ++ + +++ ++ ++n+ +++ D +i+ + + +++ iLl Csg+gv ++ ++d tr|G1KLL8|G1KLL8_ANOCA 312 AHMSALtNQQTSKVFVCGVkSTAKEAELKGLFAQMECKNIELIREDFANIEPTDNKlQKVKVILLLPRCSGLGVsnpiefiLNEHED 398 7999996667777776665155677899999*****************99887777688999999999*****74444444679999 PP HHHH.-.......CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH- CS Methyltr_RsmB-F 101 vklrrk.......ekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr 157 + l+r+ e ++ la++q e l+ a++ k + +vY+TCsv +eEne v+++aL + tr|G1KLL8|G1KLL8_ANOCA 399 AELLRDlsqgsvaEDKLNMLAQQQFEELTHAMQFAKVQ-AVVYCTCSVYPEENEVVVNKALTSG 461 99998544344436678889999999999999999987.689******************9865 PP == domain 2 score: -3.7 bits; conditional E-value: 4.2 GTTT-TTHHHH.-CCHHCC CS Methyltr_RsmB-F 94 virrdpdvklrrkekdiaq 112 + +r+++++ +++e+ ++ tr|G1KLL8|G1KLL8_ANOCA 637 AFERQRNIRKSKQEERVMI 655 5689999999999998765 PP >> tr|H9GNL4|H9GNL4_ANOCA Uncharacterized protein OS=Anolis carolinensis OX=28377 GN=fbl PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.9 0.0 7.2e-05 0.13 7 86 .. 148 226 .. 144 230 .. 0.74 Alignments for each domain: == domain 1 score: 11.9 bits; conditional E-value: 7.2e-05 -TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEE CS Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlD 86 +++ ++l l aa G +h+++++ ++g v+Av+ +++ + +++ k+ tn+i + Dar+++k+ ++D i D tr|H9GNL4|H9GNL4_ANOCA 148 KPGAKVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLINVAKK--RTNIIPVIEDARHPHKYRMLiGMVDVIFAD 226 566789999*************************987665555544433..345677888999998875433466666655 PP >> tr|R4G9E3|R4G9E3_ANOCA Arsenite methyltransferase OS=Anolis carolinensis OX=28377 GN=AS3MT PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 6.7 0.0 0.0028 5.2 8 50 .. 67 109 .. 61 136 .. 0.86 2 ? 2.8 0.0 0.043 79 110 139 .. 154 187 .. 150 196 .. 0.82 Alignments for each domain: == domain 1 score: 6.7 bits; conditional E-value: 0.0028 TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHH CS Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrva 50 e+ +ilDl ++ G +++l+ ++g+++ +d+ + ++ + tr|R4G9E3|R4G9E3_ANOCA 67 EDCWILDLGCGSGRDCYMLSQLVGENGHITGIDMTEAQVEVAK 109 5668*****************************9998776554 PP == domain 2 score: 2.8 bits; conditional E-value: 0.043 HCCHHHHHHHHHHHHHHHEEEEEEE....EEEES CS Methyltr_RsmB-F 110 iaqlaklqkellsaaidllkkgGvl....vYsTC 139 +++l+ ++++l+ a ++lk+gG + vY+ C tr|R4G9E3|R4G9E3_ANOCA 154 VINLSPDKRAVLHEAYQMLKAGGEMyfsdVYANC 187 67788999***************99555566666 PP >> tr|R4GBY7|R4GBY7_ANOCA tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Anolis carolinensis OX # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.0 0.0 0.00014 0.25 2 89 .. 97 184 .. 96 201 .. 0.84 Alignments for each domain: == domain 1 score: 11.0 bits; conditional E-value: 0.00014 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--S.EEEEES-CCCCHHHHCC--EEEEEEEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtn.tivleaDarkidkvlggelfDriLlDa 87 ++L+++++ + + ++ G+ i ++++g+++ v+ +++R+++ +e + v + ++v + D+ k ++ ++ D + lD tr|R4GBY7|R4GBY7_ANOCA 97 MMLELKPGSIVCESGTGSGSLSHAIIRTIAPTGHLYTVEFHQQRAEKAIEEFREHKVDHlVTVKNQDVCKNGFGVT-DVADAVFLDI 182 67888888888888899999999999999**********************9999998626789999999977777.599******9 PP -- CS Methyltr_RsmB-F 88 PC 89 P tr|R4GBY7|R4GBY7_ANOCA 183 PS 184 96 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (200 nodes) Target sequences: 18528 (9796552 residues searched) Passed MSV filter: 688 (0.037133); expected 370.6 (0.02) Passed bias filter: 462 (0.0249352); expected 370.6 (0.02) Passed Vit filter: 29 (0.0015652); expected 18.5 (0.001) Passed Fwd filter: 10 (0.000539724); expected 0.2 (1e-05) Initial search space (Z): 18528 [actual number of targets] Domain search space (domZ): 10 [number of targets reported over threshold] # CPU time: 0.18u 0.01s 00:00:00.19 Elapsed: 00:00:00.07 # Mc/sec: 27990.15 // [ok]