# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database: proteomes/Monodelphis_domestica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltr_RsmB-F [M=200]
Accession: PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.9e-82 276.0 0.0 2.9e-82 275.4 0.0 1.3 1 tr|F7EVA4|F7EVA4_MONDO Uncharacterized protein OS=Monodelphi
9.4e-45 153.0 0.0 1.9e-44 152.0 0.0 1.6 1 tr|F7FNT7|F7FNT7_MONDO NOP2/Sun RNA methyltransferase family
2.9e-38 131.8 0.0 5.4e-37 127.6 0.0 2.4 1 tr|F6QCU8|F6QCU8_MONDO NOP2/Sun RNA methyltransferase family
3.3e-33 115.3 0.0 4.3e-33 114.9 0.0 1.1 1 tr|F6U5C4|F6U5C4_MONDO Uncharacterized protein OS=Monodelphi
6.3e-30 104.5 0.0 1.1e-29 103.8 0.0 1.4 1 tr|F6WS57|F6WS57_MONDO NOP2/Sun RNA methyltransferase family
3.4e-27 95.7 0.0 4.8e-27 95.2 0.0 1.2 1 tr|F6RHT5|F6RHT5_MONDO NOP2/Sun RNA methyltransferase family
9.7e-10 38.7 1.0 3.5e-09 36.8 1.0 1.8 1 tr|F7AYL7|F7AYL7_MONDO NOP2/Sun RNA methyltransferase family
2.3e-06 27.6 0.0 3.6e-06 27.0 0.0 1.3 1 tr|F6YIJ3|F6YIJ3_MONDO Uncharacterized protein OS=Monodelphi
6.1e-05 23.0 0.0 0.00012 22.0 0.0 1.5 1 tr|F7B9I4|F7B9I4_MONDO HemK methyltransferase family member
0.003 17.5 0.0 0.0053 16.7 0.0 1.4 1 tr|F7FNK2|F7FNK2_MONDO Methyltransferase like 15 OS=Monodelp
------ inclusion threshold ------
0.095 12.6 0.0 0.16 11.8 0.0 1.4 1 tr|F6YAE8|F6YAE8_MONDO Fibrillarin OS=Monodelphis domestica
Domain annotation for each sequence (and alignments):
>> tr|F7EVA4|F7EVA4_MONDO Uncharacterized protein OS=Monodelphis domestica OX=13616 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 275.4 0.0 1.5e-85 2.9e-82 1 200 [] 424 632 .. 424 632 .. 0.95
Alignments for each domain:
== domain 1 score: 275.4 bits; conditional E-value: 1.5e-85
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87
+++Lapqe+e+ilD+c+aPGgKT++ia+lmkn+g+++A+dan+eRlk+v+ nl+rLgvtnti+++ D+r+++kv+gg fDr+LlDa
tr|F7EVA4|F7EVA4_MONDO 424 VIALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHDDGRHFPKVVGG--FDRVLLDA 508
589*************************************************************************9..******** PP
--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTS CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsep 170
PCsgtgvi++dp+vk+++++kdi+++a+ qkell +aid++ k+gG++vY+TCs++veEne+v+e+aLkkr +v+lv+t l
tr|F7EVA4|F7EVA4_MONDO 509 PCSGTGVISKDPSVKTNKDDKDIKRCAHIQKELLLSAIDSVnaasKTGGYIVYCTCSITVEENEWVVEYALKKR-NVRLVPTGLD-- 592
*************************************************************************9.9******554.. PP
TTSSECEEC..............T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 171 kglklgeea..............gtlrllPhtenkdgffiaklk 200
+g+e +t+r++Pht+n+dgffiak+k
tr|F7EVA4|F7EVA4_MONDO 593 ----FGQEGfthfrerrfhptlrSTRRFYPHTHNMDGFFIAKFK 632
....4443334445578*************************96 PP
>> tr|F7FNT7|F7FNT7_MONDO NOP2/Sun RNA methyltransferase family member 6 OS=Monodelphis domestica OX=13616 GN=NSUN6 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 152.0 0.0 9.8e-48 1.9e-44 3 167 .. 229 399 .. 227 462 .. 0.85
Alignments for each domain:
== domain 1 score: 152.0 bits; conditional E-value: 9.8e-48
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.........--E CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.........elf 80
+L+pq++e+ilD+caaPGgKTthia+lm+++g+v+A+d+ ++++++++n L ++ + ++ ++k + + e f
tr|F7FNT7|F7FNT7_MONDO 229 VLNPQPGEKILDMCAAPGGKTTHIAALMRDQGEVIAMDKIPSKVEKIKQNAALLQLNCIRAFCCNGTKALGKIEDgqggppfspESF 315
8*************************************************99998886666666666554333334566******** PP
EEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBS CS
Methyltr_RsmB-F 81 DriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetel 167
DriLlDaPCsg+g ++p++ ++ + k++++++ lq++l++ a++llk+gGvlvYsTC+++++Enee+++ aL + + +l++ e
tr|F7FNT7|F7FNT7_MONDO 316 DRILLDAPCSGMG---QRPNMTYTWTLKEVMSYQPLQRKLFTVAVQLLKPGGVLVYSTCTITLAENEEQVAWALTAFPCLQLQSQEP 399
***********98...78999999**************************************************9999888887654 PP
>> tr|F6QCU8|F6QCU8_MONDO NOP2/Sun RNA methyltransferase family member 2 OS=Monodelphis domestica OX=13616 GN=NSUN2 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 127.6 0.0 2.8e-40 5.4e-37 2 199 .. 176 433 .. 175 434 .. 0.88
Alignments for each domain:
== domain 1 score: 127.6 bits; conditional E-value: 2.8e-40
HHH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.... CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.... 77
llL+ q++ +ilD+caaPG+KT+ + e+++ ++g v+A+d++++R +++ krL+ ++v++ Da+ i++ +
tr|F6QCU8|F6QCU8_MONDO 176 LLLNVQPHHKILDMCAAPGSKTAQLIEMLHadmnvsfPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDmngk 262
589**********************99965222233346889**********************************99887766778 PP
...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT.E CS
Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred.v 160
++DriL D+PCsg g++r++ dv + + + ql+ lq ++ + +++l +gG +vYsTCs+++ E+e+vi+++L+k e
tr|F6QCU8|F6QCU8_MONDO 263 kevLFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGVEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEGaL 349
887789*********************6666888999*******************************************9987514 PP
EEESSBSTTSTTSSECEEC..............................................T-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 161 elvetelsepkglklgeea..............................................gtlrllPhtenkdgffiakl 199
el ++ se glk + lr+lPh++n+ gff+a l
tr|F6QCU8|F6QCU8_MONDO 350 ELADV-SSELPGLKWMPGItqwkvmtkdgqwfadwkdvpqsrhtqirptmfppkgqenlkkmnleRCLRILPHHQNTGGFFVAVL 433
66666.444445544333344899999************************************9999***************987 PP
>> tr|F6U5C4|F6U5C4_MONDO Uncharacterized protein OS=Monodelphis domestica OX=13616 GN=NSUN3 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 114.9 0.0 2.2e-36 4.3e-33 2 200 .] 126 333 .. 125 333 .. 0.82
Alignments for each domain:
== domain 1 score: 114.9 bits; conditional E-value: 2.2e-36
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--....SEEEEES-CCCCHHHHCC--EEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt....ntivleaDarkidkvlggelfDriL 84
l+L+ q++e++lD+caaPGgK +++ + g ++ ++ R k ++++l+ + + ++v+e D+r+i + e+fD++L
tr|F6U5C4|F6U5C4_MONDO 126 LALEIQNGERVLDMCAAPGGKSVALLQC-AYPGYFHCNEYDNLRSKWLKQTLESFIPQpmmnIIKVSELDGREIGDLQP-EMFDKVL 210
689************************9.999********************987433233256899*******87777.6****** PP
EEE--CCGGG.TTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTE......EEES CS
Methyltr_RsmB-F 85 lDaPCsgtgv.irrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredv......elve 164
+DaPCs + k + + ++ ++l q ell +ai+ l++gG lvYsTC++ +En+evi ++L+++ ++ e+ +
tr|F6U5C4|F6U5C4_MONDO 211 VDAPCSNDRSwLFSSDTQKASYRLNQRKELPLVQLELLRSAIKALRPGGSLVYSTCTLSKAENSEVISQVLNSHSNIfpvdmkEMAS 297
******97651555555677778888899*********************************************9852222224555 PP
SBSTTSTTSSECEECT-EEE-TTTTS..-SEEEEEEE CS
Methyltr_RsmB-F 165 telsepkglklgeeagtlrllPhten.kdgffiaklk 200
t ++++ + g+e+ l +lP++ + ++f+aklk
tr|F6U5C4|F6U5C4_MONDO 298 TASHDFTFAPSGQEY-GLLVLPDKGKaWGPMFVAKLK 333
566666666677777.677888875515789999996 PP
>> tr|F6WS57|F6WS57_MONDO NOP2/Sun RNA methyltransferase family member 5 OS=Monodelphis domestica OX=13616 GN=NSUN5 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 103.8 0.0 5.4e-33 1.1e-29 1 199 [. 218 421 .. 218 422 .. 0.83
Alignments for each domain:
== domain 1 score: 103.8 bits; conditional E-value: 5.4e-33
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlD 86
a+lLap ++ +++D+caaPG KT+h+a+l+kn+g+++A d ++ Rl ++a+ l+r gv + + D i+ + + iLlD
tr|F6WS57|F6WS57_MONDO 218 AMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAGRLAAMATLLTRAGVSCCEIANEDFLSISPSNPRySRVQYILLD 304
689****************************************************************9888655444489999**** PP
E--CCGGGTTT-TTH..HHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-.TTEEEESS.BSTT CS
Methyltr_RsmB-F 87 aPCsgtgvirrdpdv..klrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr.edvelvet.else 169
Csg g+++r+ + ++ +++ + +la q++ l a+ + lvYsTCsv eEne v++++L+++ +lv+ +l
tr|F6WS57|F6WS57_MONDO 305 PSCSGSGMVSRQLEEpgAVSPSQERLHALAGFQRRALRHALSF-PALQRLVYSTCSVCQEENEDVVQDILQQKlGPFRLVDAlPLWP 390
***********86541247888999************998865.45568*********************99833456655313333 PP
STTSS..ECEECT-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 170 pkglk..lgeeagtlrllPhtenkdgffiakl 199
++gl+ g e +r P++ + gff+a l
tr|F6WS57|F6WS57_MONDO 391 QRGLStfPGAE-HCIRASPEATLTGGFFVAVL 421
33333113444.48999999999999*99987 PP
>> tr|F6RHT5|F6RHT5_MONDO NOP2/Sun RNA methyltransferase family member 4 OS=Monodelphis domestica OX=13616 GN=NSUN4 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 95.2 0.0 2.5e-30 4.8e-27 2 171 .. 180 352 .. 179 369 .. 0.83
Alignments for each domain:
== domain 1 score: 95.2 bits; conditional E-value: 2.5e-30
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHT...T--SEEEEES-CCCCHHHHCC--EEEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrL...gvtntivleaDarkidkvlggelfDriLl 85
l+L q+++t+lDlca+PGgKT ++ l + ++ A+d++++R++r+++ l+ v ++ v++ D+rk + +++Dr+L+
tr|F6RHT5|F6RHT5_MONDO 180 LALGVQPGDTVLDLCAGPGGKTLALL-LTGCCRHLAANDISTSRTRRLKQVLHSYvpqDVSQVRVTSQDGRKWGDLER-STYDRVLV 264
678899****************8776.569********************99986222456899*********66555.79****** PP
EE--CC..GGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTS CS
Methyltr_RsmB-F 86 DaPCsg..tgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsep 170
D+PC++ v++ d+++ r ++ + + + lq +ll a + +k+gGv vYsTC++ ne v+ a+ ++ ++ +++e
tr|F6RHT5|F6RHT5_MONDO 265 DVPCTTdrHSVLEEDNNIFKRSRKVERQMMPMLQVQLLVAGLLATKPGGVAVYSTCTLSHLQNEYVVGGAIDILANQYQIDAQVEEL 351
*****8335899*****966666667778899**********************************998877776666666666665 PP
T CS
Methyltr_RsmB-F 171 k 171
+
tr|F6RHT5|F6RHT5_MONDO 352 S 352
5 PP
>> tr|F7AYL7|F7AYL7_MONDO NOP2/Sun RNA methyltransferase family member 7 OS=Monodelphis domestica OX=13616 GN=NSUN7 PE=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 36.8 1.0 1.8e-12 3.5e-09 24 155 .. 312 459 .. 295 472 .. 0.75
Alignments for each domain:
== domain 1 score: 36.8 bits; conditional E-value: 1.8e-12
HHHHHH.TTTTSEEEEEESS.CCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCGGG.......TTT-TT CS
Methyltr_RsmB-F 24 thiael.mknkgtvvAvdan.keRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgv.......irrdpd 100
+h++ l ++++++++ ++ + + ++++e + +g++n+ +l+ i++ +++ iLl Csg+gv ++ ++d
tr|F7AYL7|F7AYL7_MONDO 312 AHMSTLtNQSTSKIYVCGVKsQAKESEMKELFTNMGCKNIELLHENFIDIETKDQRlQKVKVILLLPRCSGLGVsnpiefiLNENED 398
78999977778888877765155778899999***********9766555444333356999999999*****84333333567777 PP
HHHH.-.......CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHH CS
Methyltr_RsmB-F 101 vklrrk.......ekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLk 155
+ l+++ e + l+++q e l+ a++ +k++ +vY+TCsv +eEne+v+++aL+
tr|F7AYL7|F7AYL7_MONDO 399 ADLLKDhsqgsiaEDKLHILVEQQYEQLKHAMKFTKAQ-AIVYCTCSVYPEENEAVVKKALE 459
77776522122213345557788888888888888877.79*******************96 PP
>> tr|F6YIJ3|F6YIJ3_MONDO Uncharacterized protein OS=Monodelphis domestica OX=13616 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.0 0.0 1.9e-09 3.6e-06 2 29 .. 125 152 .. 124 166 .. 0.90
Alignments for each domain:
== domain 1 score: 27.0 bits; conditional E-value: 1.9e-09
HHH---TT-EEEECS-TT-HHHHHHHHH CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiael 29
l+L++q++e++lD+caaPGgK +++
tr|F6YIJ3|F6YIJ3_MONDO 125 LALELQNGERVLDMCAAPGGKSVALLQC 152
78*******************9988875 PP
>> tr|F7B9I4|F7B9I4_MONDO HemK methyltransferase family member 1 OS=Monodelphis domestica OX=13616 GN=HEMK1 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 22.0 0.0 6.2e-08 0.00012 4 69 .. 164 231 .. 161 238 .. 0.86
Alignments for each domain:
== domain 1 score: 22.0 bits; conditional E-value: 6.2e-08
H---TT-E..EEECS-TT-HHH.HHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CC CS
Methyltr_RsmB-F 4 Lapqeeet..ilDlcaaPGgKT.thiaelmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDar 69
La q + + ilD+c++ G+ +++++l ++++vvAvd+ +e ++ en +rL ++ +++++ D++
tr|F7B9I4|F7B9I4_MONDO 164 LAHQSHSWplILDVCCGSGAIAlSLLSKL--TQSRVVAVDKGEEAVQLTRENAQRLHLEdRIQIVRHDIT 231
6777777777*********9763677777..899************************977999999986 PP
>> tr|F7FNK2|F7FNK2_MONDO Methyltransferase like 15 OS=Monodelphis domestica OX=13616 GN=METTL15 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.7 0.0 2.8e-06 0.0053 3 92 .. 83 175 .. 81 189 .. 0.89
Alignments for each domain:
== domain 1 score: 16.7 bits; conditional E-value: 2.8e-06
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.....--EEEEE CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.....elfDriL 84
+Lap++++ ilD+ + Gg i++ + t++ +d++ + + ++a+ l+ L +++ l ++ + +l + ++D +L
tr|F7FNK2|F7FNK2_MONDO 83 CLAPRQGQNILDMTFGSGGHSRAILQK-ELDVTLYVLDRDPT-AYAIAQQLSELYPKQIRALLSQFSQAEAMLMKagvqpGTVDGVL 167
79**********************997.77889999999987.67899******9999999999999999999888888889***** PP
EEE--CCG CS
Methyltr_RsmB-F 85 lDaPCsgt 92
lD Cs++
tr|F7FNK2|F7FNK2_MONDO 168 LDLGCSSM 175
******86 PP
>> tr|F6YAE8|F6YAE8_MONDO Fibrillarin OS=Monodelphis domestica OX=13616 GN=FBL PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.8 0.0 8.5e-05 0.16 8 86 .. 158 235 .. 153 250 .. 0.77
Alignments for each domain:
== domain 1 score: 11.8 bits; conditional E-value: 8.5e-05
TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEE CS
Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlD 86
++ ++l l aa G +h+++++ ++g v+Av+ +++ + +++ k+ tn+i + Dar+++k+ ++D i D
tr|F6YAE8|F6YAE8_MONDO 158 PGAKVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLINVAKK--RTNIIPVIEDARHPHKYRMLiGMVDVIFAD 235
56789999*************************987665555544433..345677888999998875433466766666 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (200 nodes)
Target sequences: 21272 (11266248 residues searched)
Passed MSV filter: 629 (0.0295694); expected 425.4 (0.02)
Passed bias filter: 426 (0.0200263); expected 425.4 (0.02)
Passed Vit filter: 45 (0.00211546); expected 21.3 (0.001)
Passed Fwd filter: 11 (0.000517112); expected 0.2 (1e-05)
Initial search space (Z): 21272 [actual number of targets]
Domain search space (domZ): 11 [number of targets reported over threshold]
# CPU time: 0.20u 0.01s 00:00:00.21 Elapsed: 00:00:00.08
# Mc/sec: 28165.62
//
[ok]