# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database: proteomes/Mus_musculus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltr_RsmB-F [M=200]
Accession: PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.2e-84 280.9 0.0 9.3e-84 280.3 0.0 1.3 1 sp|Q922K7|NOP2_MOUSE Probable 28S rRNA (cytosine-C(5))-met
1.2e-45 155.9 0.0 2.4e-45 155.0 0.0 1.5 1 sp|Q7TS68|NSUN6_MOUSE Putative methyltransferase NSUN6 OS=M
1.4e-38 132.9 0.0 1.6e-37 129.4 0.0 2.2 1 sp|Q1HFZ0|NSUN2_MOUSE tRNA (cytosine(34)-C(5))-methyltransf
3.5e-30 105.4 0.0 5.6e-30 104.8 0.0 1.3 1 sp|Q8K4F6|NSUN5_MOUSE Probable 28S rRNA (cytosine-C(5))-met
5.8e-29 101.5 0.0 7.7e-29 101.1 0.0 1.2 1 sp|Q8CCT7|NSUN3_MOUSE tRNA (cytosine(34)-C(5))-methyltransf
3.8e-07 30.2 1.0 2.1e-06 27.9 1.0 2.1 1 sp|Q14AW5|NSUN7_MOUSE Putative methyltransferase NSUN7 OS=M
3.3e-06 27.2 0.0 5.9e-06 26.4 0.0 1.4 1 sp|Q9DCL4|MET15_MOUSE Probable methyltransferase-like prote
0.0016 18.5 0.0 0.0028 17.6 0.0 1.4 1 sp|Q921L7|HEMK1_MOUSE HemK methyltransferase family member
------ inclusion threshold ------
0.062 13.2 0.0 0.098 12.6 0.0 1.3 1 tr|Q8BML3|Q8BML3_MOUSE Glycosyltransferase 28 domain-contain
0.11 12.5 0.0 0.16 11.9 0.0 1.2 1 sp|Q8K1A0|METL5_MOUSE Methyltransferase-like protein 5 OS=M
0.11 12.4 0.0 0.19 11.7 0.0 1.4 1 sp|P35550|FBRL_MOUSE rRNA 2'-O-methyltransferase fibrillar
0.13 12.2 0.0 0.24 11.3 0.0 1.5 1 sp|Q80WS3|FBLL1_MOUSE rRNA/tRNA 2'-O-methyltransferase fibr
0.14 12.0 0.0 0.34 10.8 0.0 1.6 2 tr|Q8CBC7|Q8CBC7_MOUSE Putative tRNA (cytidine(32)/guanosine
0.2 11.6 0.0 20 5.1 0.0 2.2 2 sp|Q91WU5|AS3MT_MOUSE Arsenite methyltransferase OS=Mus mus
Domain annotation for each sequence (and alignments):
>> sp|Q922K7|NOP2_MOUSE Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nop2 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 280.3 0.0 5.9e-87 9.3e-84 1 200 [] 362 570 .. 362 570 .. 0.95
Alignments for each domain:
== domain 1 score: 280.3 bits; conditional E-value: 5.9e-87
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE-- CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPC 89
+++Lapqe+e+ilD+c+aPGgKT++ia+lmkn+g+++A+dan+ Rlk+v+ nl+rLgvtnti++++D+r+++kv+gg fDr+LlDaPC
sp|Q922K7|NOP2_MOUSE 362 VMALAPQEHERILDMCCAPGGKTSYIAQLMKNTGVILANDANADRLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG--FDRVLLDAPC 448
589*************************************************************************9..********** PP
CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTSTTSS CS
Methyltr_RsmB-F 90 sgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkglk 174
sgtgvi++dp+vk++++ekdi+++a+lqkell +aid++ k+gG+lvY+TCs++veEne+v+++aLkkr +v+lv+t l +++
sp|Q922K7|NOP2_MOUSE 449 SGTGVISKDPAVKTNKDEKDIQRCAHLQKELLLSAIDSVnaasKTGGYLVYCTCSITVEENEWVVDYALKKR-NVRLVPTGLDFGQEGF 536
***********************************************************************9.9******665544444 PP
ECEEC........T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 175 lgeea........gtlrllPhtenkdgffiaklk 200
+ +a +t+r++Pht+n+dgffiak+k
sp|Q922K7|NOP2_MOUSE 537 TRFQArrfhptlrSTRRFYPHTHNMDGFFIAKFK 570
44444899************************96 PP
>> sp|Q7TS68|NSUN6_MOUSE Putative methyltransferase NSUN6 OS=Mus musculus OX=10090 GN=Nsun6 PE=2 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 155.0 0.0 1.5e-48 2.4e-45 2 166 .. 228 400 .. 227 464 .. 0.88
Alignments for each domain:
== domain 1 score: 155.0 bits; conditional E-value: 1.5e-48
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC...........- CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg...........e 78
+L+pq++e+ilD+caaPGgKTth a+lm++kg+v+A+d+ ++++++++n + Lg++++ ++ Da+k k + e
sp|Q7TS68|NSUN6_MOUSE 228 HVLDPQPGEKILDMCAAPGGKTTHTAALMQDKGEVIALDKILTKVNKLKQNASLLGLHSIRAFCFDATKALKLDTTdgieggppflpE 315
68*****************************************************************997665444467889****** PP
-EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSB CS
Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvete 166
fDri+lDaPCsg+g ++p++ + + k++++++ lq++ll+ a++llk+gGvlvYsTC+++++Enee+++ aL++ + +l++ e
sp|Q7TS68|NSUN6_MOUSE 316 SFDRIILDAPCSGMG---QRPNMACTWTLKEVTSYQPLQRKLLHVAVQLLKPGGVLVYSTCTITLAENEEQVAWALRTFPCLQLQPQE 400
*************98...689999999999************************************************9999998875 PP
>> sp|Q1HFZ0|NSUN2_MOUSE tRNA (cytosine(34)-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nsun2 PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 129.4 0.0 1e-40 1.6e-37 2 199 .. 170 427 .. 169 428 .. 0.89
Alignments for each domain:
== domain 1 score: 129.4 bits; conditional E-value: 1e-40
HHH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC..... CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg..... 77
llL+ +++ +ilD+caaPG+KTt + e+++ ++g v+A+d++++R +++ krL+ ++v++ Da+ i++ + +
sp|Q1HFZ0|NSUN2_MOUSE 170 LLLNVEPHHKILDMCAAPGSKTTQLIEMLHadmsvpfPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLTVDvdgrk 257
58999**********************976222233347899************************************9998888899 PP
..--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-T.TEEE CS
Methyltr_RsmB-F 78 ..elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkre.dvel 162
++DriL D+PCsg g++r++ dv + + + ql+ lq ++ + +++l +gG +vYsTCs+++ E+e+vi+++L+k e el
sp|Q1HFZ0|NSUN2_MOUSE 258 eiLFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPVEDEAVIAALLEKSEgALEL 345
87789*********************6666888999*******************************************998724577 PP
ESSBSTTS.TTSSECEEC............................................T-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 163 vetelsep.kglklgeea............................................gtlrllPhtenkdgffiakl 199
+++++ p + g+ + lr+lPh++n+ gff+a l
sp|Q1HFZ0|NSUN2_MOUSE 346 ADVSAELPgLKWMPGVSQwkvmtrdgqwfadwhevpqgrhtqirptmfpptdleklqamhleRCLRILPHHQNTGGFFVAVL 427
77744432134445555599999*************************************9999***************987 PP
>> sp|Q8K4F6|NSUN5_MOUSE Probable 28S rRNA (cytosine-C(5))-methyltransferase OS=Mus musculus OX=10090 GN=Nsun5 PE=2 SV=
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 104.8 0.0 3.5e-33 5.6e-30 1 199 [. 219 422 .. 219 423 .. 0.81
Alignments for each domain:
== domain 1 score: 104.8 bits; conditional E-value: 3.5e-33
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDa 87
a+lL p ++ +++D+caaPG KT++ia+l+kn+g+++A d++++Rl ++a+ + r gv + e D ++ +++ iLlD
sp|Q8K4F6|NSUN5_MOUSE 219 AMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVARAGVSCCELAEKDFLTVSPSDQRySQVQYILLDP 306
689********************************************************99******8766433333478******** PP
--CCGGGTTT-TTHHHH.-C..CHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-T.TEEEESS..BS.TT CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrke..kdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkre.dvelvet..el.se 169
Csg g+++r+ + + + ++ + +++la q++ l a+ + lvYsTCs+ eEne v++eaL+++ +l ++ + +
sp|Q8K4F6|NSUN5_MOUSE 307 SCSGSGMLSRQLEEHGEGTPskERLQALAGFQQRALCHALRF-PSLQRLVYSTCSLCQEENEDVVQEALQHNSgTFRLAPVlpTWpHR 393
**********99988776552167899999888777666543.34457*********************9876256787752122122 PP
STTSSECEECT-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 170 pkglklgeeagtlrllPhtenkdgffiakl 199
+ + g e+ lr P+t + gffia +
sp|Q8K4F6|NSUN5_MOUSE 394 GLSTFPGSEH-CLRASPETTLTGGFFIAVF 422
2333345555.99**************987 PP
>> sp|Q8CCT7|NSUN3_MOUSE tRNA (cytosine(34)-C(5))-methyltransferase, mitochondrial OS=Mus musculus OX=10090 GN=Nsun3 PE
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 101.1 0.0 4.8e-32 7.7e-29 2 200 .] 125 332 .. 124 332 .. 0.80
Alignments for each domain:
== domain 1 score: 101.1 bits; conditional E-value: 4.8e-32
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--....SEEEEES-CCCCHHHHCC--EEEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt....ntivleaDarkidkvlggelfDriLl 85
l+L+++++e +lDlcaaPGgK +++ + g ++ ++ ++ R + + ++l+ + + ++v+e D+r++ + ++fD++L+
sp|Q8CCT7|NSUN3_MOUSE 125 LALELRDGEAVLDLCAAPGGKSVALLQC-AYPGYLLCNEYDRPRGRWLRQTLESFIPQplinVIKVSELDGREMGDAQP-ATFDKVLV 210
789************************9.999*******************9997544344367899*******77766.69****** PP
EE--CCGG.GTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTSTT CS
Methyltr_RsmB-F 86 DaPCsgtg.virrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkg 172
DaPCs + + k + ++ ++l lq el+ +ai+ l++gG lvYsTC++ +En+ vi e+L + ++ v++ s+
sp|Q8CCT7|NSUN3_MOUSE 211 DAPCSNDRsWLFSSDSQKAAYRIHQRKNLPVLQVELVRSAIKALRPGGLLVYSTCTLSKAENQDVISEVLTSDSNIVPVDI--SG-IA 295
*****86515666667778888888899******************************************99876554443..22.22 PP
SSECEEC........T-EEE-TTTTS..-SEEEEEEE CS
Methyltr_RsmB-F 173 lklgeea........gtlrllPhtenk.dgffiaklk 200
+++++ l ++P++ + +++iaklk
sp|Q8CCT7|NSUN3_MOUSE 296 RTFSQDFtfaptdqkCSLLVIPEKGKAwGPMYIAKLK 332
2222222233344447888899886542679999986 PP
>> sp|Q14AW5|NSUN7_MOUSE Putative methyltransferase NSUN7 OS=Mus musculus OX=10090 GN=Nsun7 PE=2 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 27.9 1.0 1.3e-09 2.1e-06 51 157 .. 342 462 .. 311 478 .. 0.67
Alignments for each domain:
== domain 1 score: 27.9 bits; conditional E-value: 1.3e-09
HHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCGGG.......TTT-TTHHHH.-......CCH.HCCHHHHHHHHHHH CS
Methyltr_RsmB-F 51 enlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgv.......irrdpdvklrrk......ekd.iaqlaklqkellsa 123
+ +r+g++n+ +l+ i++ + + iLl Cs++gv ++ ++d l+++ +kd + +l+++q e l+
sp|Q14AW5|NSUN7_MOUSE 342 KLFTRMGCQNIEILHETFLSIESKDHRlQNVKVILLLPRCSSLGVsnpvefiLNEHEDKSLLQDlsqgglPKDkLETLVQQQFEQLTH 429
4568999999999998877776555544778888888889999982222222334444444443222233333256677777788888 PP
HHHHEEEEEEEEEEES---CTCTHHHHHHHHHH- CS
Methyltr_RsmB-F 124 aidllkkgGvlvYsTCsvlveEneevieeaLkkr 157
a++ +k + +vY+TCsv eEne v+e+aL+ +
sp|Q14AW5|NSUN7_MOUSE 430 AMKFTKVQ-AIVYCTCSVSKEENEDVVEKALEYQ 462
88877876.79********************865 PP
>> sp|Q9DCL4|MET15_MOUSE Probable methyltransferase-like protein 15 OS=Mus musculus OX=10090 GN=Mettl15 PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 26.4 0.0 3.7e-09 5.9e-06 2 92 .. 82 175 .. 81 189 .. 0.92
Alignments for each domain:
== domain 1 score: 26.4 bits; conditional E-value: 3.7e-09
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.....--EEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.....elfDriL 84
+Lapq+++ +lD+ + Gg T i++ ++ v+A+d++ + ++ae l+rL t+++ l + ++ + l + ++D iL
sp|Q9DCL4|MET15_MOUSE 82 HCLAPQKGQVFLDMTFGSGGHTRAILQK-EPDVMVYALDRDPV-AYAIAEQLSRLYPTQIQALLGQFSQAEALLMKagvqpGTIDGIL 167
579************************8.9999*******987.679***********************9999888888889***** PP
EEE--CCG CS
Methyltr_RsmB-F 85 lDaPCsgt 92
+D Cs++
sp|Q9DCL4|MET15_MOUSE 168 MDLGCSSM 175
******86 PP
>> sp|Q921L7|HEMK1_MOUSE HemK methyltransferase family member 1 OS=Mus musculus OX=10090 GN=Hemk1 PE=2 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.6 0.0 1.7e-06 0.0028 5 69 .. 157 221 .. 153 228 .. 0.87
Alignments for each domain:
== domain 1 score: 17.6 bits; conditional E-value: 1.7e-06
---TT-EEEECS-TT-HHH.HHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CC CS
Methyltr_RsmB-F 5 apqeeetilDlcaaPGgKT.thiaelmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDar 69
q++ il++ ++ G+ T +++++l +k++vvAvd+++ ++ +en +rL ++ + +++ D++
sp|Q921L7|HEMK1_MOUSE 157 RAQDGPLILEVGCGSGAITlSLLSQL--PKSRVVAVDKEEAAVSLTHENAQRLQLQdRIRIIHLDIT 221
5688889**********995667777..999************************967889999986 PP
>> tr|Q8BML3|Q8BML3_MOUSE Glycosyltransferase 28 domain-containing 2 OS=Mus musculus OX=10090 GN=Glt28d2 PE=1 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.6 0.0 6.2e-05 0.098 125 144 .. 113 132 .. 98 138 .. 0.86
Alignments for each domain:
== domain 1 score: 12.6 bits; conditional E-value: 6.2e-05
HHHEEEEEEEEEEES---CT CS
Methyltr_RsmB-F 125 idllkkgGvlvYsTCsvlve 144
+++l+k+G l Y+TCs+l+e
tr|Q8BML3|Q8BML3_MOUSE 113 AKQLHKEGHLFYCTCSMLPE 132
577899***********997 PP
>> sp|Q8K1A0|METL5_MOUSE Methyltransferase-like protein 5 OS=Mus musculus OX=10090 GN=Mettl5 PE=2 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.9 0.0 9.7e-05 0.16 29 88 .. 70 128 .. 47 145 .. 0.83
Alignments for each domain:
== domain 1 score: 11.9 bits; conditional E-value: 9.7e-05
HTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE- CS
Methyltr_RsmB-F 29 lmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaP 88
m +g v d+++ l+ ++n++ + +tn+ +++ D+ ++ +++ lfD +++ P
sp|Q8K1A0|METL5_MOUSE 70 AMLGAGLCVGFDIDEDALEIFNKNVEEFELTNVDMIQCDVYSLSNRMSK-LFDTVIMNPP 128
45567888999************************************96.******9988 PP
>> sp|P35550|FBRL_MOUSE rRNA 2'-O-methyltransferase fibrillarin OS=Mus musculus OX=10090 GN=Fbl PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.7 0.0 0.00012 0.19 7 87 .. 164 243 .. 159 267 .. 0.81
Alignments for each domain:
== domain 1 score: 11.7 bits; conditional E-value: 0.00012
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDa 87
+++ ++l l aa G +h+++++ + g v+Av+ +++ + ++ nl + tn+i + Dar+++k+ +++D i D+
sp|P35550|FBRL_MOUSE 164 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKK-RTNIIPVIEDARHPHKYRMLiAMVDVIFADV 243
567789999*************************9866555554.44443.3457788899999999866547788777775 PP
>> sp|Q80WS3|FBLL1_MOUSE rRNA/tRNA 2'-O-methyltransferase fibrillarin-like protein 1 OS=Mus musculus OX=10090 GN=Fbll1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.3 0.0 0.00015 0.24 7 86 .. 152 230 .. 147 242 .. 0.75
Alignments for each domain:
== domain 1 score: 11.3 bits; conditional E-value: 0.00015
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEE CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlD 86
+++ ++l l aa G +h+++++ + g v+Av+ ++ R+ r n+ + tn+i + Dar++ k+ ++D i D
sp|Q80WS3|FBLL1_MOUSE 152 KPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSH-RAGRDLVNVAKKR-TNIIPVLEDARHPLKYRMLiGMVDVIFAD 230
56778999**************************975.5555445555433.45778888999887664332456666555 PP
>> tr|Q8CBC7|Q8CBC7_MOUSE Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Mus musculus OX=10090 GN
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.8 0.0 0.00021 0.34 11 44 .. 44 79 .. 39 120 .. 0.75
2 ? -2.4 0.0 2.5 3.9e+03 109 134 .. 126 153 .. 108 154 .. 0.64
Alignments for each domain:
== domain 1 score: 10.8 bits; conditional E-value: 0.00021
EEEECS-TT-HHHHHHHHH..TTTTSEEEEEESSCC CS
Methyltr_RsmB-F 11 tilDlcaaPGgKTthiael..mknkgtvvAvdanke 44
+ +DlcaaPG+ +++ + +g+vvAvd ++
tr|Q8CBC7|Q8CBC7_MOUSE 44 RAVDLCAAPGSWSQVLSQKvgGQGSGQVVAVDLQAM 79
568*************99834466789*****8764 PP
== domain 2 score: -2.4 bits; conditional E-value: 2.5
HHCCHHHHHHHH..HHHHHHHEEEEEEE CS
Methyltr_RsmB-F 109 diaqlaklqkel..lsaaidllkkgGvl 134
d+ ++++ q l l++a ++lk gG
tr|Q8CBC7|Q8CBC7_MOUSE 126 DVDEYMQAQLLLaaLNIATHVLKLGGCF 153
4444444443322266777778999876 PP
>> sp|Q91WU5|AS3MT_MOUSE Arsenite methyltransferase OS=Mus musculus OX=10090 GN=As3mt PE=1 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.3 0.0 0.021 34 8 47 .. 71 110 .. 65 153 .. 0.83
2 ? 5.1 0.0 0.012 20 110 145 .. 158 195 .. 151 202 .. 0.79
Alignments for each domain:
== domain 1 score: 4.3 bits; conditional E-value: 0.021
TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHH CS
Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlk 47
e+ +ilDl ++ G +++l+ +kg+v+ +d+ + ++
sp|Q91WU5|AS3MT_MOUSE 71 ENCRILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTEVQVE 110
5678*****************************9887665 PP
== domain 2 score: 5.1 bits; conditional E-value: 0.012
HCCHHHHHHHHHHHHHHHEEEEEEEEEEE..S---CTC CS
Methyltr_RsmB-F 110 iaqlaklqkellsaaidllkkgGvlvYsT..CsvlveE 145
+++l+ ++++l+ + +lk+gG l +s s++v E
sp|Q91WU5|AS3MT_MOUSE 158 VINLVPDKQQVLQEVYRVLKHGGELYFSDvyASLEVPE 195
67788899*****************9885223555555 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (200 nodes)
Target sequences: 22289 (11757923 residues searched)
Passed MSV filter: 765 (0.0343219); expected 445.8 (0.02)
Passed bias filter: 516 (0.0231504); expected 445.8 (0.02)
Passed Vit filter: 50 (0.00224326); expected 22.3 (0.001)
Passed Fwd filter: 14 (0.000628113); expected 0.2 (1e-05)
Initial search space (Z): 22289 [actual number of targets]
Domain search space (domZ): 14 [number of targets reported over threshold]
# CPU time: 0.22u 0.01s 00:00:00.23 Elapsed: 00:00:00.08
# Mc/sec: 29394.81
//
[ok]