# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database: proteomes/Nematostella_vectensis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltr_RsmB-F [M=200]
Accession: PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-76 257.3 0.0 1.9e-76 256.6 0.0 1.3 1 tr|A7S5Z9|A7S5Z9_NEMVE Predicted protein OS=Nematostella vec
2.7e-42 145.1 0.0 6.2e-42 144.0 0.0 1.7 1 tr|A7SEM2|A7SEM2_NEMVE Predicted protein OS=Nematostella vec
1.1e-37 130.1 0.0 4.2e-37 128.2 0.0 1.8 1 tr|A7SAM8|A7SAM8_NEMVE Predicted protein (Fragment) OS=Nemat
1.3e-31 110.2 0.0 1.5e-31 110.1 0.0 1.0 1 tr|A7S2N2|A7S2N2_NEMVE Predicted protein OS=Nematostella vec
4.8e-25 88.8 0.0 8.2e-25 88.1 0.0 1.4 1 tr|A7RT21|A7RT21_NEMVE Predicted protein OS=Nematostella vec
0.00027 21.1 0.0 0.00027 21.1 0.0 1.1 1 tr|A7TBF3|A7TBF3_NEMVE Predicted protein (Fragment) OS=Nemat
0.00034 20.7 0.0 0.0032 17.6 0.0 2.3 1 tr|A7SXC0|A7SXC0_NEMVE Predicted protein OS=Nematostella vec
0.0045 17.1 0.0 0.27 11.3 0.0 2.3 2 tr|A7RIE8|A7RIE8_NEMVE Predicted protein OS=Nematostella vec
0.0052 16.9 0.0 0.0094 16.0 0.0 1.4 1 tr|A7SXL3|A7SXL3_NEMVE Protein-L-isoaspartate O-methyltransf
0.0091 16.1 0.0 0.015 15.4 0.0 1.4 1 tr|A7RYK6|A7RYK6_NEMVE Predicted protein OS=Nematostella vec
------ inclusion threshold ------
0.01 15.9 0.0 0.018 15.1 0.0 1.4 1 tr|A7RWP0|A7RWP0_NEMVE Predicted protein OS=Nematostella vec
0.013 15.6 0.0 0.023 14.8 0.0 1.5 1 tr|A7T8E8|A7T8E8_NEMVE Predicted protein OS=Nematostella vec
0.019 15.0 0.0 0.3 11.1 0.0 2.1 2 tr|A7T9Z7|A7T9Z7_NEMVE Predicted protein OS=Nematostella vec
0.02 15.0 0.0 0.3 11.1 0.0 2.1 2 tr|A7SZN3|A7SZN3_NEMVE Predicted protein OS=Nematostella vec
0.028 14.5 0.0 0.042 13.9 0.0 1.1 1 tr|A7RHA8|A7RHA8_NEMVE Predicted protein OS=Nematostella vec
0.053 13.6 0.1 0.075 13.1 0.1 1.2 1 tr|A7RYX9|A7RYX9_NEMVE Predicted protein (Fragment) OS=Nemat
0.13 12.3 8.4 23 5.0 0.2 3.9 5 tr|A7T1V4|A7T1V4_NEMVE Predicted protein (Fragment) OS=Nemat
0.17 11.9 0.0 0.3 11.1 0.0 1.4 1 tr|A7S8G2|A7S8G2_NEMVE Predicted protein OS=Nematostella vec
0.23 11.5 0.0 0.57 10.2 0.0 1.6 2 tr|A7SVE3|A7SVE3_NEMVE Predicted protein OS=Nematostella vec
0.23 11.5 0.0 0.65 10.0 0.0 1.6 2 tr|A7SVE2|A7SVE2_NEMVE Predicted protein OS=Nematostella vec
0.25 11.4 0.0 0.66 10.0 0.0 1.6 2 tr|A7SY09|A7SY09_NEMVE Predicted protein OS=Nematostella vec
Domain annotation for each sequence (and alignments):
>> tr|A7S5Z9|A7S5Z9_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g166855 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 256.6 0.0 1.6e-79 1.9e-76 1 200 [] 195 403 .. 195 403 .. 0.94
Alignments for each domain:
== domain 1 score: 256.6 bits; conditional E-value: 1.6e-79
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87
+++Lapqe+e++lD+caaPGgKTt++a+lmkn+g vvA+da+keR+k++++n++rLgvtnt v+++D+r ++kv+gg fDr LlDa
tr|A7S5Z9|A7S5Z9_NEMVE 195 VMALAPQEKERVLDMCAAPGGKTTYLAALMKNTGIVVANDAKKERTKALVANIHRLGVTNTVVCNYDGRAFPKVMGG--FDRTLLDA 279
589*************************************************************************9..******** PP
--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTS CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsep 170
PCsgtgvi++dp+vk++++ekdi ++++ qkel+ aaid++ +gG++vYsTCs+ veE+e+v+++aL+kr +v+lv+t l
tr|A7S5Z9|A7S5Z9_NEMVE 280 PCSGTGVISKDPSVKTNKTEKDILRCSHVQKELILAAIDSVdaksPTGGYIVYSTCSIMVEEDEWVVDYALSKR-HVKLVPTGLD-- 363
*****************************************997778**************************9.9******543.. PP
TTSSECEEC..............T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 171 kglklgeea..............gtlrllPhtenkdgffiaklk 200
+g+e t+r++ h++n+dgff+aklk
tr|A7S5Z9|A7S5Z9_NEMVE 364 ----FGREGfskfrgrhfhpslkLTRRFYAHAHNMDGFFVAKLK 403
....33333333446889999999******************96 PP
>> tr|A7SEM2|A7SEM2_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g211081 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 144.0 0.0 5.3e-45 6.2e-42 3 165 .. 266 440 .. 264 488 .. 0.90
Alignments for each domain:
== domain 1 score: 144.0 bits; conditional E-value: 5.3e-45
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC............ CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg............ 77
+L pq +e +lD+caaPGgKT hia+lmknkg +vA d+++ +++++++n + v ++ Da+k ++ +
tr|A7SEM2|A7SEM2_NEMVE 266 ILGPQSGESVLDMCAAPGGKTCHIAALMKNKGLIVAFDKSQPKIQKIIANCEMQKVSIVKTHVIDASKALDTKAApssrdvsttspp 352
799***********************************************998888877777778887755555556789999**** PP
...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEE CS
Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredve 161
e fDriLlDaPCs++g +r ++v ++ k k+++++ klq++++s+a+ ll++gG+lvYsTC++++eEne++++ aL++ + +
tr|A7SEM2|A7SEM2_NEMVE 353 yppEAFDRILLDAPCSALG--QRPQSV-VHMKLKELQSFPKLQRKIFSSAVGLLRPGGTLVYSTCTITPEENEKQVAWALRSFPGLR 436
*****************99..577777.888999***********************************************999999 PP
EESS CS
Methyltr_RsmB-F 162 lvet 165
lv+
tr|A7SEM2|A7SEM2_NEMVE 437 LVPQ 440
9875 PP
>> tr|A7SAM8|A7SAM8_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g20689 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 128.2 0.0 3.6e-40 4.2e-37 3 199 .. 132 388 .. 130 389 .. 0.87
Alignments for each domain:
== domain 1 score: 128.2 bits; conditional E-value: 3.6e-40
HH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC..... CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg..... 77
l++ +++++ilD caaPG+KT+ i e+++ +g v+A++ +++R +++ krL + +++ Da+ +++ +
tr|A7SAM8|A7SAM8_NEMVE 132 LMDIKPGQKILDTCAAPGSKTSQIIEMLHgdketgiAEGLVIANELQNKRCYMLIHQSKRLRSPSCVITNHDASTYPTLHVKkengd 218
6788999********************7522222223578**********************************9998877778999 PP
...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-T.TE CS
Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkre.dv 160
lfDriL D+PCsg g++r++p + + +++ +l++ q ++l a+++l gG +vYsTC++ + Ene v++e+L++ +
tr|A7SAM8|A7SAM8_NEMVE 219 rtpLLFDRILCDVPCSGDGTMRKNPLIWNKWTPQLGVSLHRTQLRILARAMEMLEVGGRIVYSTCTMSPIENESVVAEMLRNSDgAL 305
99999**********************66668888899*******************************************985234 PP
EEESSBSTTSTTSSECEEC...............................................T-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 161 elvetelsepkglklgeea...............................................gtlrllPhtenkdgffiakl 199
elv++ +e +lk + +r++Ph++++ gffia+l
tr|A7SAM8|A7SAM8_NEMVE 306 ELVDL-SNELPNLKRS--PglhswklmmkdgsevtgcdpgspaflggfrpsmlpppdneakamhleCCIRVYPHQQDTGGFFIAAL 388
66666.3333333333..2446799***************************************9999****************98 PP
>> tr|A7S2N2|A7S2N2_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g102215 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 110.1 0.0 1.3e-34 1.5e-31 2 178 .. 20 200 .. 19 228 .. 0.85
Alignments for each domain:
== domain 1 score: 110.1 bits; conditional E-value: 1.3e-34
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHT...T--SEEEEES-CCCCHHHHCC--EEEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrL...gvtntivleaDarkidkvlggelfDriLl 85
++L+ ++ t+lD+ca+PGgKT +++l++++g +vA++ ++R +++ + ++ g+tn+++ +D++k+ +DriL+
tr|A7S2N2|A7S2N2_NEMVE 20 ICLDVGPDSTVLDMCASPGGKTVAMMQLLSERGGLVANEPTQSRRRKLRKVIQEYipkGQTNITIRGMDGTKFGGLEP-CSYDRILV 105
67999999**********************************9988887777764344899************65544.68****** PP
EE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH..-TTEEEESSBSTTS CS
Methyltr_RsmB-F 86 DaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkk..redvelvetelsep 170
DaPCs+ r + +ek +++++lq++l+ +a+ +l ++G +vYsTC++ + En vi+ +L++ + +++ ++se
tr|A7S2N2|A7S2N2_NEMVE 106 DAPCSTDRHCLRSGFQTDSWSEKKSQKFSQLQNKLVMSALGSLTSDGRVVYSTCTMSPYENDGVIQGVLENfrHGGKNISIERISEE 192
******99999998888899999**********************************************852244455555556666 PP
TTSSECEE CS
Methyltr_RsmB-F 171 kglklgee 178
++++ ge
tr|A7S2N2|A7S2N2_NEMVE 193 QIAAWGEM 200
66666665 PP
>> tr|A7RT21|A7RT21_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g240471 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 88.1 0.0 7e-28 8.2e-25 7 200 .] 221 421 .. 215 421 .. 0.77
Alignments for each domain:
== domain 1 score: 88.1 bits; conditional E-value: 7e-28
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCG CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgt 92
++ +++D+caaPG K +h+a+ ++n+g+v+ d++++Rl +++ +k+ g t + + +d +++ + ++ i +D Csg
tr|A7RT21|A7RT21_NEMVE 221 PPGAHVIDACAAPGNKSSHLAAKLNNNGRVFSFDISASRLAVMQKQMKKAGATCVVTEHKSFLDVDPRSSQyRNVEYIVVDPSCSGS 307
567799**********************************************95555555555555555556789************ PP
GGTTT-TTHHHH.-CCHHCC....HHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-T.TEEEESS.BSTTSTTS CS
Methyltr_RsmB-F 93 gvirrdpdvklrrkekdiaq....laklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkre.dvelvet.elsepkgl 173
g+i+r + +e d++q la q +l+ a+ + + YsTCs++ +Ene v+++aLk + + el + e ++gl
tr|A7RT21|A7RT21_NEMVE 308 GIISRLDGLVSDEQEDDLQQrlesLADFQLSVLTHAFSF-PAVKKVAYSTCSIHSQENEDVVHKALKVSQgQFELAHAlESWPSRGL 393
*********9*******9873222455566666655432.3444699*******************976526666654122223444 PP
SECEEC.T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 174 klgeea.gtlrllPhtenkdgffiaklk 200
+ ++a + lr P++++++gff+a ++
tr|A7RT21|A7RT21_NEMVE 394 PVFQGAeKCLRASPESDHTNGFFVALFQ 421
4433333589***************885 PP
>> tr|A7TBF3|A7TBF3_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g153500 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 21.1 0.0 2.4e-07 0.00027 134 157 .. 25 48 .. 2 63 .. 0.80
Alignments for each domain:
== domain 1 score: 21.1 bits; conditional E-value: 2.4e-07
EEEEES---CTCTHHHHHHHHHH- CS
Methyltr_RsmB-F 134 lvYsTCsvlveEneevieeaLkkr 157
+ YsTCs++ +Ene v+++aLk
tr|A7TBF3|A7TBF3_NEMVE 25 VAYSTCSIHSQENEDVVHKALKVS 48
78*******************965 PP
>> tr|A7SXC0|A7SXC0_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g194470 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 17.6 0.0 2.7e-06 0.0032 10 156 .. 197 356 .. 192 366 .. 0.68
Alignments for each domain:
== domain 1 score: 17.6 bits; conditional E-value: 2.7e-06
-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-C.CCCHHHHCC--EEEEEEEE--CCGGGT CS
Methyltr_RsmB-F 10 etilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDa.rkidkvlggelfDriLlDaPCsgtgvi 95
+ i+ G T++++ ++++ tv+ a ++++ +++Lg +n++ le i+++ +++ i + +PCs tg++
tr|A7SXC0|A7SXC0_NEMVE 197 DDIIQTHVESGNITAYLSSVIHPDRTVFTFGATPDTKGHLQNKMEKLGARNVTFLEEHFlDAIPNDERFRKVKIIVVNVPCSKTGIV 283
5566666667999*************************************99988764312333333334577799**********9 PP
TT-TTHHHH.-CCHHCCHHH...HHHHHHHHHHHHE..........EEEEEEEEEES---CTCTHHHHHHHHHH CS
Methyltr_RsmB-F 96 rrdpdvklrrkekdiaqlak...lqkellsaaidll..........kkgGvlvYsTCsvlveEneevieeaLkk 156
+ v + + i++la+ ++++ a+++l +G +vY T s++ En v+++a+++
tr|A7SXC0|A7SXC0_NEMVE 284 NPVDFVLQEGVSASIKELARgglDNSKIRGLAFQHLgvlkhamsfpLLQG-IVYITRSIHTWENIDVVKKAMEE 356
87666655555555555554221223333333333344432222223334.67888888888888888887765 PP
>> tr|A7RIE8|A7RIE8_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g159091 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 11.3 0.0 0.00023 0.27 3 48 .. 46 89 .. 44 140 .. 0.72
2 ? 3.6 0.0 0.054 63 119 169 .. 266 312 .. 251 335 .. 0.80
Alignments for each domain:
== domain 1 score: 11.3 bits; conditional E-value: 0.00023
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHH CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkr 48
+Lap+++e ++D+ + Gg T i++ k +v+Avd++ ++
tr|A7RIE8|A7RIE8_NEMVE 46 FLAPKDGEVFVDATFGAGGHTCAILNS--AKCKVFAVDRDPVAVEI 89
69********************99766..77889***998766554 PP
== domain 2 score: 3.6 bits; conditional E-value: 0.054
HHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTT CS
Methyltr_RsmB-F 119 ellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelse 169
+ l+aa +ll +gG lv s + +E++ ++++Lk+++ ++++t +s+
tr|A7RIE8|A7RIE8_NEMVE 266 KALKAAKKLLTPGGRLVV--ISFHSAEDS-IVKHFLKDEATRKSSKT-MSD 312
4589999*********95..699999986.78******999998888.444 PP
>> tr|A7SXL3|A7SXL3_NEMVE Protein-L-isoaspartate O-methyltransferase OS=Nematostella vectensis OX=45351 GN=v1g136839 PE
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 16.0 0.0 8.1e-06 0.0094 6 73 .. 76 148 .. 70 161 .. 0.84
Alignments for each domain:
== domain 1 score: 16.0 bits; conditional E-value: 8.1e-06
--TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEES.....SCCCHHHHHHHHHHTT--SEEEEES-CCCCHH CS
Methyltr_RsmB-F 6 pqeeetilDlcaaPGgKTthiaelmknkgtvvAvda.....nkeRlkrvaenlkrLgvtntivleaDarkidk 73
+e+ ++lD+ ++ G T+ +a ++ ++g+vv +d+ + +R + ++ n + L + +i++++D+rk +
tr|A7SXL3|A7SXL3_NEMVE 76 IREGAKVLDVGSGSGYLTAVMAIMVGKTGKVVGIDHiqelvDMSRKNVLKGNANLLEENRLILVTGDGRKGYS 148
578889*****************************6333336789************************9744 PP
>> tr|A7RYK6|A7RYK6_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g241579 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.4 0.0 1.3e-05 0.015 29 89 .. 93 153 .. 68 232 .. 0.78
Alignments for each domain:
== domain 1 score: 15.4 bits; conditional E-value: 1.3e-05
HTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHHCC--EEEEEEEE-- CS
Methyltr_RsmB-F 29 lmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvlggelfDriLlDaPC 89
l ++++v A+d+n ++ vaen + gv+ +++ ++aD+ d+ g +fD i P
tr|A7RYK6|A7RYK6_NEMVE 93 LQVPQAEVWATDINPAAVDDVAENARLHGVEtSVTAIQADVFDCDDLKG-MKFDMIFFRPPA 153
55699*******************99999986788899****9988777.7*****988774 PP
>> tr|A7RWP0|A7RWP0_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g203274 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 15.1 0.0 1.6e-05 0.018 6 85 .. 76 158 .. 69 164 .. 0.84
Alignments for each domain:
== domain 1 score: 15.1 bits; conditional E-value: 1.6e-05
--TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHH.....TT--SEEEEES-CCCCHHHHCC--EEEEEE CS
Methyltr_RsmB-F 6 pqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkr.....LgvtntivleaDarkidkvlggelfDriLl 85
++e+ t lD+ ++ G T+ +a ++ +kg+v+ +d+ ++ + + ++n+k+ L+++++ ++ +D+rk + g fD i +
tr|A7RWP0|A7RWP0_NEMVE 76 LKEGATALDVGSGSGYLTACMAYMVGEKGKVYGIDHIDQLVTEAKNNIKKgnpelLSQKKVELIVGDGRKGHAAGG--PFDAIHV 158
678899******************************999999999999865555588889999*****99855444..5888765 PP
>> tr|A7T8E8|A7T8E8_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g223766 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 14.8 0.0 2e-05 0.023 29 88 .. 93 152 .. 68 200 .. 0.82
Alignments for each domain:
== domain 1 score: 14.8 bits; conditional E-value: 2e-05
HTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHHCC--EEEEEEEE- CS
Methyltr_RsmB-F 29 lmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvlggelfDriLlDaP 88
l ++++v A+d+n ++ vaen + gv+ +++ ++aD+ d+ g +fD i P
tr|A7T8E8|A7T8E8_NEMVE 93 LQVPQAEVWATDINPAAVDDVAENARLHGVEtSVTAIQADVFDCDDLKG-MKFDMIFFRPP 152
55699*******************999999867888999***9988777.7****998777 PP
>> tr|A7T9Z7|A7T9Z7_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g248861 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.1 0.0 0.00026 0.3 9 53 .. 36 80 .. 30 106 .. 0.83
2 ? 1.5 0.0 0.22 2.6e+02 120 138 .. 120 140 .. 110 147 .. 0.75
Alignments for each domain:
== domain 1 score: 11.1 bits; conditional E-value: 0.00026
T-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHH CS
Methyltr_RsmB-F 9 eetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenl 53
+++lDl ++ G T +a+ +n + ++ +d +k R++ ++n
tr|A7T9Z7|A7T9Z7_NEMVE 36 AKFVLDLGCGTGDVTGAMAANFSNDASIIGIDPDKYRVELAKSNH 80
5689**********************************9988884 PP
== domain 2 score: 1.5 bits; conditional E-value: 0.22
HHHHHHHHEEEEEEE..EEEE CS
Methyltr_RsmB-F 120 llsaaidllkkgGvl..vYsT 138
+ + d+lk+gG+l vY+T
tr|A7T9Z7|A7T9Z7_NEMVE 120 AFRDIYDSLKPGGMLvmVYAT 140
5667899******87235887 PP
>> tr|A7SZN3|A7SZN3_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g248239 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.1 0.0 0.00026 0.3 9 53 .. 36 80 .. 30 106 .. 0.83
2 ? 1.5 0.0 0.23 2.7e+02 120 138 .. 120 140 .. 110 146 .. 0.74
Alignments for each domain:
== domain 1 score: 11.1 bits; conditional E-value: 0.00026
T-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHH CS
Methyltr_RsmB-F 9 eetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenl 53
+++lDl ++ G T +a+ +n + ++ +d +k R++ ++n
tr|A7SZN3|A7SZN3_NEMVE 36 AKFVLDLGCGTGDVTGAMAANFSNDASIIGIDPDKYRVELAKSNH 80
5689**********************************9988884 PP
== domain 2 score: 1.5 bits; conditional E-value: 0.23
HHHHHHHHEEEEEEE..EEEE CS
Methyltr_RsmB-F 120 llsaaidllkkgGvl..vYsT 138
+ + d+lk+gG+l vY+T
tr|A7SZN3|A7SZN3_NEMVE 120 AFRDIYDSLKPGGMLvmVYAT 140
5667899******87235887 PP
>> tr|A7RHA8|A7RHA8_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g197133 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.9 0.0 3.6e-05 0.042 12 84 .. 76 147 .. 66 152 .. 0.82
Alignments for each domain:
== domain 1 score: 13.9 bits; conditional E-value: 3.6e-05
EEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHHCC--EEEEE CS
Methyltr_RsmB-F 12 ilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvlggelfDriL 84
+l++ ++ g T+ +a+l ++k +v A+d+n + +k+ aen k gv ++ ++D+ k + g+ +fD i
tr|A7RHA8|A7RHA8_NEMVE 76 LLEIGCGT-GLTSIMAALYSKKCQVWATDVNPSAVKNTAENAKLHGVDnQVRTATGDVFKAPGLAGK-TFDIIF 147
55555554.57*******************************9999994577889999999888875.999775 PP
>> tr|A7RYX9|A7RYX9_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g98246 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.1 0.1 6.4e-05 0.075 8 92 .. 16 94 .. 12 118 .. 0.81
Alignments for each domain:
== domain 1 score: 13.1 bits; conditional E-value: 6.4e-05
TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE--CCG CS
Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPCsgt 92
++ +l ++a gK t +a ++ ++v+A+d+n+e+lk++++ + ++ + v +D i+k+ ++ +Dr+ + C+g+
tr|A7RYX9|A7RYX9_NEMVE 16 NKVVVLSAAAQGIGKATALACA-REGAKVIATDINAEKLKELHS-VPGIETR--VVDVTDYEAIKKFASE--VDRVDVLFNCAGL 94
55567777777779***99987.999**************9975.4555555..6667899999999998..9**9888888886 PP
>> tr|A7T1V4|A7T1V4_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis OX=45351 GN=v1g5201 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.9 0.2 0.021 25 116 141 .. 10 35 .. 3 39 .. 0.78
2 ? 3.8 0.6 0.044 51 117 141 .. 25 49 .. 19 52 .. 0.75
3 ? 5.0 0.2 0.019 23 117 142 .. 39 64 .. 35 71 .. 0.83
4 ? 4.8 0.2 0.023 27 117 141 .. 53 77 .. 48 85 .. 0.80
5 ? 4.3 0.2 0.033 38 117 141 .. 81 105 .. 76 107 .] 0.77
Alignments for each domain:
== domain 1 score: 4.9 bits; conditional E-value: 0.021
HHHHHHHHHHHHEEEEEEEEEEES-- CS
Methyltr_RsmB-F 116 lqkellsaaidllkkgGvlvYsTCsv 141
+ +l+ l+ + G l+Y Cs+
tr|A7T1V4|A7T1V4_NEMVE 10 TRGQLIYMNCSLIATRGQLIYMNCSL 35
45678888888889999999999997 PP
== domain 2 score: 3.8 bits; conditional E-value: 0.044
HHHHHHHHHHHEEEEEEEEEEES-- CS
Methyltr_RsmB-F 117 qkellsaaidllkkgGvlvYsTCsv 141
+ +l+ l+ + G l+Y Cs+
tr|A7T1V4|A7T1V4_NEMVE 25 RGQLIYMNCSLIATRGQLIYINCSL 49
5577777888888888899988886 PP
== domain 3 score: 5.0 bits; conditional E-value: 0.019
HHHHHHHHHHHEEEEEEEEEEES--- CS
Methyltr_RsmB-F 117 qkellsaaidllkkgGvlvYsTCsvl 142
+ +l+ + l+ + G l+Y Cs+
tr|A7T1V4|A7T1V4_NEMVE 39 RGQLIYINCSLIATRGQLIYMNCSLI 64
568888999999999********975 PP
== domain 4 score: 4.8 bits; conditional E-value: 0.023
HHHHHHHHHHHEEEEEEEEEEES-- CS
Methyltr_RsmB-F 117 qkellsaaidllkkgGvlvYsTCsv 141
+ +l+ l+ + G l+Y Cs+
tr|A7T1V4|A7T1V4_NEMVE 53 RGQLIYMNCSLIATRGQLIYMNCSL 77
5678888888899999999999997 PP
== domain 5 score: 4.3 bits; conditional E-value: 0.033
HHHHHHHHHHHEEEEEEEEEEES-- CS
Methyltr_RsmB-F 117 qkellsaaidllkkgGvlvYsTCsv 141
+ +l+ l+ + G l+Y Cs+
tr|A7T1V4|A7T1V4_NEMVE 81 RGQLIYMNCSLIATRGQLIYMNCSL 105
5577888888888999999999986 PP
>> tr|A7S8G2|A7S8G2_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g186929 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.1 0.0 0.00026 0.3 10 86 .. 139 214 .. 133 234 .. 0.75
Alignments for each domain:
== domain 1 score: 11.1 bits; conditional E-value: 0.00026
-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHH.HHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEE CS
Methyltr_RsmB-F 10 etilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrva.enlkrLgvtntivleaDarkidkvlgg.elfDriLlD 86
++l l aa G +h+++++ ++g v+Av+ +++ + ++ kr + + + Dar+++k+ ++D i D
tr|A7S8G2|A7S8G2_NEMVE 139 SKVLYLGAASGTTVSHVSDIVGPEGLVYAVEFSHRSGRDLInVAKKRTN---IVPIIEDARHPHKYRMLvGMVDCIFAD 214
6789999************************987655544404444544...445667888888764432467776666 PP
>> tr|A7SVE3|A7SVE3_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g218064 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.2 0.0 0.00049 0.57 28 88 .. 92 152 .. 65 162 .. 0.83
2 ? -2.5 0.0 4 4.6e+03 82 109 .. 195 222 .. 188 235 .. 0.68
Alignments for each domain:
== domain 1 score: 10.2 bits; conditional E-value: 0.00049
HHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHHCC--EEEEEEEE- CS
Methyltr_RsmB-F 28 elmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvlggelfDriLlDaP 88
+l ++++v A+d+n ++ vaen gv+ +++ ++aD+ d g +fD i P
tr|A7SVE3|A7SVE3_NEMVE 92 ALQVPQAEVWATDINPAAVEDVAENACLHGVEnSVTAIQADVFDCDGLKG-MKFDMIFFRQP 152
455699*******************9999999557899*****9987777.79**9987655 PP
== domain 2 score: -2.5 bits; conditional E-value: 4
EEEEEE--CCGGGTTT-TTHHHH.-CCH CS
Methyltr_RsmB-F 82 riLlDaPCsgtgvirrdpdvklrrkekd 109
++Ll P sg g + + + k+r +
tr|A7SVE3|A7SVE3_NEMVE 195 KLLLTTPVSGWGLDEEKLEEKVREASWE 222
6788888888887776666666655444 PP
>> tr|A7SVE2|A7SVE2_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g218063 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.0 0.0 0.00056 0.65 29 88 .. 93 152 .. 68 156 .. 0.82
2 ? -1.7 0.0 2.1 2.5e+03 82 106 .. 195 219 .. 158 237 .. 0.68
Alignments for each domain:
== domain 1 score: 10.0 bits; conditional E-value: 0.00056
HTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHHCC--EEEEEEEE- CS
Methyltr_RsmB-F 29 lmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvlggelfDriLlDaP 88
l ++++v A+d+n ++ vaen gv+ +++ ++aD+ d g +fD i P
tr|A7SVE2|A7SVE2_NEMVE 93 LQVPQAEVWATDINPAAVEDVAENACLHGVEnSVTAIQADVFDCDGLKG-MKFDMIFFRQP 152
55699*******************9999999557899*****9987777.79**9987555 PP
== domain 2 score: -1.7 bits; conditional E-value: 2.1
EEEEEE--CCGGGTTT-TTHHHH.- CS
Methyltr_RsmB-F 82 riLlDaPCsgtgvirrdpdvklrrk 106
++Ll P sg g + + + k+r
tr|A7SVE2|A7SVE2_NEMVE 195 KLLLTTPVSGWGLDEEKLEEKVREA 219
6788888888887766655555443 PP
>> tr|A7SY09|A7SY09_NEMVE Predicted protein OS=Nematostella vectensis OX=45351 GN=v1g248028 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 10.0 0.0 0.00057 0.66 29 88 .. 93 152 .. 67 157 .. 0.83
2 ? -1.7 0.0 2.3 2.6e+03 82 111 .. 195 224 .. 160 233 .. 0.71
Alignments for each domain:
== domain 1 score: 10.0 bits; conditional E-value: 0.00057
HTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHHCC--EEEEEEEE- CS
Methyltr_RsmB-F 29 lmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvlggelfDriLlDaP 88
l ++++v A+d+n ++ vaen gv+ +++ ++aD+ d g +fD i P
tr|A7SY09|A7SY09_NEMVE 93 LQVPQAEVWATDINPAAVEDVAENACLHGVEnSVTAIQADVFDCDGLKG-MKFDMIFFRQP 152
55699*******************9999999557899*****9987777.79**9987655 PP
== domain 2 score: -1.7 bits; conditional E-value: 2.3
EEEEEE--CCGGGTTT-TTHHHH.-CCHHC CS
Methyltr_RsmB-F 82 riLlDaPCsgtgvirrdpdvklrrkekdia 111
++Ll P sg g + + + k+r +++
tr|A7SY09|A7SY09_NEMVE 195 KLLLTTPVSGWGLDEEKLEEKVREASWELK 224
778888888888877777777666655555 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (200 nodes)
Target sequences: 24428 (8257945 residues searched)
Passed MSV filter: 719 (0.0294334); expected 488.6 (0.02)
Passed bias filter: 517 (0.0211642); expected 488.6 (0.02)
Passed Vit filter: 53 (0.00216964); expected 24.4 (0.001)
Passed Fwd filter: 21 (0.000859669); expected 0.2 (1e-05)
Initial search space (Z): 24428 [actual number of targets]
Domain search space (domZ): 21 [number of targets reported over threshold]
# CPU time: 0.18u 0.01s 00:00:00.19 Elapsed: 00:00:00.07
# Mc/sec: 23594.13
//
[ok]