# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database: proteomes/Pan_troglodytes.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltr_RsmB-F [M=200]
Accession: PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.7e-84 280.9 0.0 1.1e-83 280.2 0.0 1.3 1 tr|A0A2J8JEW0|A0A2J8JEW0_PANTR NOP2 isoform 16 OS=Pan troglodyt
3.4e-45 154.5 0.0 5.2e-45 153.9 0.0 1.4 1 tr|H2Q1P7|H2Q1P7_PANTR NOP2/Sun RNA methyltransferase f
1.3e-38 133.0 0.0 8.9e-35 120.5 0.0 2.3 2 tr|H2R3L8|H2R3L8_PANTR NOP2/Sun RNA methyltransferase f
1.2e-31 110.3 0.0 1.6e-31 109.9 0.0 1.2 1 tr|H2QMZ2|H2QMZ2_PANTR NOP2/Sun RNA methyltransferase f
1.7e-27 96.7 0.0 2.9e-27 96.0 0.0 1.4 1 tr|H2QUP2|H2QUP2_PANTR NOP2/Sun RNA methyltransferase f
2.2e-27 96.4 0.0 3.1e-27 95.9 0.0 1.2 1 tr|H2PYY8|H2PYY8_PANTR NOP2/Sun RNA methyltransferase f
4.3e-27 95.4 0.0 6.5e-27 94.8 0.0 1.3 1 tr|A0A2I3SHR4|A0A2I3SHR4_PANTR Uncharacterized protein OS=Pan t
9.1e-26 91.1 0.0 1.4e-25 90.5 0.0 1.3 1 tr|A0A2I3TKF9|A0A2I3TKF9_PANTR Uncharacterized protein OS=Pan t
4.3e-09 36.7 0.5 1.6e-08 34.8 0.5 1.9 1 tr|H2QPD5|H2QPD5_PANTR NOP2/Sun RNA methyltransferase f
5.4e-05 23.3 0.0 9.9e-05 22.4 0.0 1.4 1 tr|H2Q3C1|H2Q3C1_PANTR METTL15 isoform 3 OS=Pan troglod
0.0028 17.7 0.0 0.019 15.0 0.0 2.0 2 tr|A0A2I3T743|A0A2I3T743_PANTR Uncharacterized protein OS=Pan t
------ inclusion threshold ------
0.038 14.0 0.1 0.065 13.2 0.1 1.4 1 tr|H2PXZ7|H2PXZ7_PANTR DFFA isoform 1 OS=Pan troglodyte
0.083 12.9 0.0 0.13 12.2 0.0 1.2 1 tr|K7BSP4|K7BSP4_PANTR HEMK1 isoform 1 OS=Pan troglodyt
0.11 12.5 0.0 12 5.8 0.0 2.3 2 tr|H2Q437|H2Q437_PANTR AS3MT isoform 1 OS=Pan troglodyt
0.12 12.4 0.0 0.2 11.6 0.0 1.4 1 tr|A0A2I3RF95|A0A2I3RF95_PANTR Fibrillarin OS=Pan troglodytes O
0.15 12.0 0.0 0.26 11.2 0.0 1.4 1 tr|A0A2I3RWY8|A0A2I3RWY8_PANTR Fibrillarin like 1 OS=Pan troglo
0.23 11.4 0.0 0.81 9.6 0.0 1.7 2 tr|H2QLD2|H2QLD2_PANTR Uncharacterized protein OS=Pan t
0.24 11.4 0.0 0.93 9.4 0.0 1.8 2 tr|K7C690|K7C690_PANTR Putative tRNA (cytidine(32)/guan
Domain annotation for each sequence (and alignments):
>> tr|A0A2J8JEW0|A0A2J8JEW0_PANTR NOP2 isoform 16 OS=Pan troglodytes OX=9598 GN=NOP2 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 280.2 0.0 8.5e-87 1.1e-83 1 200 [] 410 618 .. 410 618 .. 0.95
Alignments for each domain:
== domain 1 score: 280.2 bits; conditional E-value: 8.5e-87
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC-- CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggel 79
+++Lapqe+e+ilD+c+aPGgKT+++a+lmkn+g+++A+dan+eRlk+v+ nl+rLgvtnti++++D+r+++kv+gg
tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 410 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG-- 486
589*************************************************************************9.. PP
EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHH CS
Methyltr_RsmB-F 80 fDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaL 154
fDr+LlDaPCsgtgvi++dp+vk++++ekdi ++a+lqkell +aid++ k+gG+lvY+TCs++veEne+v+++aL
tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 487 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLLSAIDSVnatsKTGGYLVYCTCSITVEENEWVVDYAL 565
******************************************************************************* PP
HH-TTEEEESSBSTTSTTSSECEEC........T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 155 kkredvelvetelsepkglklgeea........gtlrllPhtenkdgffiaklk 200
kkr +v+lv+t l +++ + ++ +t+r++Pht+n+dgffiak+k
tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 566 KKR-NVRLVPTGLDFGQEGFTRFQErrfhpslrSTRRFYPHTHNMDGFFIAKFK 618
**9.9******6654444333333379*************************96 PP
>> tr|H2Q1P7|H2Q1P7_PANTR NOP2/Sun RNA methyltransferase family member 6 OS=Pan troglodytes OX=9598 GN=NSUN6 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 153.9 0.0 4e-48 5.2e-45 3 166 .. 224 395 .. 222 459 .. 0.89
Alignments for each domain:
== domain 1 score: 153.9 bits; conditional E-value: 4e-48
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHH.HHCC..........- CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidk.vlgg..........e 78
+L+pq++e+ilDlcaaPGgKTthia+lm+++g+v+A+d+ ++++++++n Lg++++ ++ D++k k ++ + e
tr|H2Q1P7|H2Q1P7_PANTR 224 VLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVKlDMVEdtegeppflpE 310
8****************************************************************9987541344467889****** PP
-EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESS CS
Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvet 165
fDriLlDaPCsg+g ++p++ + + k++a+++ lq++l++aa++llk++GvlvYsTC+++++Enee+++ aL k + +l++
tr|H2Q1P7|H2Q1P7_PANTR 311 SFDRILLDAPCSGMG---QRPNMASTWSLKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQ 394
*************98...6788888889999***********************************************999999887 PP
B CS
Methyltr_RsmB-F 166 e 166
e
tr|H2Q1P7|H2Q1P7_PANTR 395 E 395
4 PP
>> tr|H2R3L8|H2R3L8_PANTR NOP2/Sun RNA methyltransferase family member 2 OS=Pan troglodytes OX=9598 GN=NSUN2 PE=2 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 120.5 0.0 7e-38 8.9e-35 2 159 .. 170 341 .. 169 370 .. 0.88
2 ! 10.3 0.0 0.00041 0.52 156 199 .. 384 427 .. 378 428 .. 0.84
Alignments for each domain:
== domain 1 score: 120.5 bits; conditional E-value: 7e-38
HHH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.... CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.... 77
llL+ +++ +ilD+caaPG+KTt + e+++ ++g v+A+d++++R +++ krL+ ++v++ Da+ i++ +
tr|H2R3L8|H2R3L8_PANTR 170 LLLNVRPHHKILDMCAAPGSKTTQLIEMLHadmnvpfPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDvdgr 256
5899***********************976222233347889***********************************9988777789 PP
...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT CS
Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred 159
++DriL D+PCsg g++r++ dv + + + ql+ lq ++ + +++l +gG +vYsTCs+++ E+e+vi+++L+k e
tr|H2R3L8|H2R3L8_PANTR 257 keiLFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEG 341
987789*********************6666888999*******************************************99864 PP
== domain 2 score: 10.3 bits; conditional E-value: 0.00041
H-TTEEEESSBSTTSTTSSECEECT-EEE-TTTTS.-SEEEEEE CS
Methyltr_RsmB-F 156 kredvelvetelsepkglklgeeagtlrllPhtenkdgffiakl 199
++ +++ + ++ ++p++l+ + + lr+lPh++n+ gff+a l
tr|H2R3L8|H2R3L8_PANTR 384 RHTQIRPTMFPPKDPEKLQAMHLERCLRILPHHQNTGGFFVAVL 427
56667777778888999888888889****************87 PP
>> tr|H2QMZ2|H2QMZ2_PANTR NOP2/Sun RNA methyltransferase family member 3 OS=Pan troglodytes OX=9598 GN=NSUN3 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 109.9 0.0 1.3e-34 1.6e-31 2 199 .. 125 331 .. 124 332 .. 0.80
Alignments for each domain:
== domain 1 score: 109.9 bits; conditional E-value: 1.3e-34
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--....SEEEEES-CCCCHHHHCC--EEEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt....ntivleaDarkidkvlggelfDriL 84
l+L+++++e++lDlcaaPGgK +++ ++ g + ++ ++ Rl+ + ++l+ + + ++v+e D+rk+ + e+fD++L
tr|H2QMZ2|H2QMZ2_PANTR 125 LALELRDGEKVLDLCAAPGGKSIALLQC-ACPGYLHCNEYDSLRLRWLRQTLESFIPQplinVIKVSELDGRKMGDAQP-EMFDKVL 209
789************************9.9**********************997544344367899*******88887.5****** PP
EEE--CCGG.GTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSB.... CS
Methyltr_RsmB-F 85 lDaPCsgtg.virrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvete.... 166
+DaPCs + + k + + ++ +l lq ell +ai+ l++gG+lvYsTC++ +En+ vi e+L+++ ++ ++++
tr|H2QMZ2|H2QMZ2_PANTR 210 VDAPCSNDRsWLFSSDSQKASCRISQRRNLPLLQIELLRSAIKALRPGGILVYSTCTLSKAENQDVISEILNSHGNIMPMDVKgiar 296
******875156666667777788888999********************************************8765444331111 PP
..STTSTTSSECEECT-EEE-TTTTS..-SEEEEEE CS
Methyltr_RsmB-F 167 ..lsepkglklgeeagtlrllPhten.kdgffiakl 199
++++ + +g+e l ++P++ + ++++akl
tr|H2QMZ2|H2QMZ2_PANTR 297 tcSHDFTFAPTGQEC-GLLVIPDKGKaWGPMYVAKL 331
113444444445444.66677766441567888887 PP
>> tr|H2QUP2|H2QUP2_PANTR NOP2/Sun RNA methyltransferase family member 5 OS=Pan troglodytes OX=9598 GN=NSUN5 PE=3 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 96.0 0.0 2.3e-30 2.9e-27 1 198 [. 219 421 .. 219 423 .. 0.80
Alignments for each domain:
== domain 1 score: 96.0 bits; conditional E-value: 2.3e-30
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCH.HHHCC--EEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkid.kvlggelfDriLlD 86
a+lL+p ++ +++D+caaPG KT+h+a+l+kn+g+++A d +++Rl ++a+ l r gv + e D ++ ++ + + iLlD
tr|H2QUP2|H2QUP2_PANTR 219 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSpSDPRYREVHYILLD 305
689********************************************************99999*998776414455589******* PP
E--CCGGGTTT-TTHHHH.-CC..HHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTE.EEESS.BSTT CS
Methyltr_RsmB-F 87 aPCsgtgvirrdpdvklrrkek..diaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredv.elvet.else 169
Csg g+ +r+ + +++ + +la q++ l a++ + lvYsTCs+ eEne v+ +aL++++ + +l + ++
tr|H2QUP2|H2QUP2_PANTR 306 PSCSGSGMPSRQLEEPGAGTPSpvRLHALAGFQQRALCHALTF-PSLQRLVYSTCSLCQEENEDVVRDALQQNPGAfRLAPAlPAWP 391
***********98877666655115678888777776665544.34447**********************9986426766422222 PP
STTSS..ECEECT-EEE-TTTTS.-SEEEEE CS
Methyltr_RsmB-F 170 pkglk..lgeeagtlrllPhtenkdgffiak 198
+gl+ g e+ lr P+t gff+a
tr|H2QUP2|H2QUP2_PANTR 392 HRGLStfPGAEH-CLRASPETTLSGGFFVAV 421
233321134444.899999999999999996 PP
>> tr|H2PYY8|H2PYY8_PANTR NOP2/Sun RNA methyltransferase family member 4 OS=Pan troglodytes OX=9598 GN=NSUN4 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 95.9 0.0 2.5e-30 3.1e-27 2 169 .. 167 340 .. 166 352 .. 0.84
Alignments for each domain:
== domain 1 score: 95.9 bits; conditional E-value: 2.5e-30
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--......SEEEEES-CCCCHHHHCC--EEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt......ntivleaDarkidkvlggelfDr 82
l+L +q+++ +lDlcaaPGgKT +++ + ++ A+d + +R+ r+++ l+ + ++ v++ D+rk + g+ ++Dr
tr|H2PYY8|H2PYY8_PANTR 167 LALGLQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEeirdgnQVRVTSWDGRKWGELEGD-TYDR 251
67999**********************9.999*****************999976444344554689*********888885.**** PP
EEEEE--CCG..GGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBS CS
Methyltr_RsmB-F 83 iLlDaPCsgt..gvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetel 167
+L+D+PC++ + ++++ r ++k+ + l lq +ll a + +k+gG +vYsTCs+ ne v++ a++ ++ ++++++
tr|H2PYY8|H2PYY8_PANTR 252 VLVDVPCTTDrhSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQV 338
*******98621445556667444455566667889***********************************9999888887777776 PP
TT CS
Methyltr_RsmB-F 168 se 169
++
tr|H2PYY8|H2PYY8_PANTR 339 ED 340
65 PP
>> tr|A0A2I3SHR4|A0A2I3SHR4_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 94.8 0.0 5.1e-30 6.5e-27 1 198 [. 201 403 .. 201 405 .. 0.81
Alignments for each domain:
== domain 1 score: 94.8 bits; conditional E-value: 5.1e-30
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.- CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.e 78
a+lL+p ++ +++D+caaPG KT+h+a+l+kn+g+++A d +++Rl ++a+ l r gv + e D ++ +
tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 201 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPLDPRyR 279
689****************************************************************887754433348 PP
-EEEEEEEE--CCGGGTTT-TTHH..HH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHH CS
Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvk..lrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLk 155
+ +LlD Csg g+ +r+ + + +++ + +la q++ l a++ + lvYsTCs+ eEne ++ +aL+
tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 280 EVHYVLLDPSCSGSGMPSRQLEEPgtGTPSPARLHALAGFQQRALCHALTFP-SLQRLVYSTCSLCQEENEDMVRDALQ 357
8*****************9977641145678999999999888777666543.4457********************** PP
H-TTE.EEESS.BSTTSTTSS..ECEECT-EEE-TTTTS.-SEEEEE CS
Methyltr_RsmB-F 156 kredv.elvet.elsepkglk..lgeeagtlrllPhtenkdgffiak 198
+++ + +l + ++ +gl+ g e+ lr P+t gff+a
tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 358 QNPGAfRLAPAlPAWPHRGLStfPGAEH-CLRASPKTTLSGGFFVAV 403
9986426766422222233321134444.899999999999999996 PP
>> tr|A0A2I3TKF9|A0A2I3TKF9_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 90.5 0.0 1.1e-28 1.4e-25 1 198 [. 201 403 .. 201 405 .. 0.81
Alignments for each domain:
== domain 1 score: 90.5 bits; conditional E-value: 1.1e-28
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.- CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.e 78
a+lL+p ++ +++D+caaPG KT+h+a+l+kn+g+++A d +++Rl ++a+ l r gv + e D ++ +
tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 201 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPLDPRyR 279
689****************************************************************887754433348 PP
-EEEEEEEE--CCGGGTTT-TTHH..HH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHH CS
Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvk..lrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLk 155
+ +LlD Csg g+ +r+ + + +++ + +la q++ l a++ + lvYs Cs+ eEne ++ +aL+
tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 280 EVHYVLLDPSCSGSGMPSRQLEEPgaGTPSPARLHALAGFQQRALCHALTFP-SLQRLVYSMCSLCQEENEDMVRDALQ 357
8*****************9876541145678999999999888777666543.4457********************** PP
H-TTE.EEESS.BSTTSTTSS..ECEECT-EEE-TTTTS.-SEEEEE CS
Methyltr_RsmB-F 156 kredv.elvet.elsepkglk..lgeeagtlrllPhtenkdgffiak 198
+++ + +l + ++ +gl+ g e+ lr P+t gff+a
tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 358 QNPGAfRLAPAlPAWPHRGLStfPGAEH-CLRASPKTTLSGGFFVAV 403
9986426766422222233321134444.899999999999999996 PP
>> tr|H2QPD5|H2QPD5_PANTR NOP2/Sun RNA methyltransferase family member 7 OS=Pan troglodytes OX=9598 GN=NSUN7 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 34.8 0.5 1.3e-11 1.6e-08 24 156 .. 308 456 .. 290 465 .. 0.77
Alignments for each domain:
== domain 1 score: 34.8 bits; conditional E-value: 1.3e-11
HHHHHH.TTTTSEEEEEESSCC.CHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCGGG.......TTT-TT CS
Methyltr_RsmB-F 24 thiael.mknkgtvvAvdanke.RlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgv.......irrdpd 100
+h++ l ++n+++v+ ++++ + +++ +++g++n+ +l+ +id+ +++ iLl Csg+gv ++ ++d
tr|H2QPD5|H2QPD5_PANTR 308 AHMSILtNNNTSKVFVCGVQSQaKDPDLKTLFTKIGCKNIEILHETFINIDSKDHRlQKVKVILLLPRCSGLGVsnpvefiLNEHED 394
67777755667777766655541566899999************999999877666688999999999*****74444443678899 PP
HHHH.-CCH.......HCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH CS
Methyltr_RsmB-F 101 vklrrkekd.......iaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkk 156
++++ ++ + la++q e l+ a++ +k++ +vY+TCsv +eEne+v+++aL+
tr|H2QPD5|H2QPD5_PANTR 395 TEFLKDHSQggisvdkLHVLAQQQYEQLTHAMKFTKAQ-AVVYCTCSVFPEENEAVVKKALEF 456
98888765322221125667888999999999999987.689******************975 PP
>> tr|H2Q3C1|H2Q3C1_PANTR METTL15 isoform 3 OS=Pan troglodytes OX=9598 GN=METTL15 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 22.4 0.0 7.8e-08 9.9e-05 2 92 .. 82 175 .. 81 189 .. 0.91
Alignments for each domain:
== domain 1 score: 22.4 bits; conditional E-value: 7.8e-08
HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.....--EEEE CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.....elfDri 83
+L pq+++ +lD+ + Gg T i++ ++ +++A+d++ + + ++ae l+ L +++ + + ++ + l + +fD +
tr|H2Q3C1|H2Q3C1_PANTR 82 HCLSPQKGQIFLDMTFGSGGHTKAILQK-ESDIVLYALDRDPT-AYALAEHLSELYPKQIRAMLGQFSQAEALLMKagvqpGTFDGV 166
579***********************98.888999*****998.6789**********************9999888898889**** PP
EEEE--CCG CS
Methyltr_RsmB-F 84 LlDaPCsgt 92
L+D Cs++
tr|H2Q3C1|H2Q3C1_PANTR 167 LMDLGCSSM 175
*******86 PP
>> tr|A0A2I3T743|A0A2I3T743_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 15.0 0.0 1.4e-05 0.019 12 92 .. 86 169 .. 78 206 .. 0.91
2 ? 0.0 0.0 0.55 7.1e+02 121 162 .. 267 306 .. 258 314 .. 0.86
Alignments for each domain:
== domain 1 score: 15.0 bits; conditional E-value: 1.4e-05
EEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.....--EEEEEE CS
Methyltr_RsmB-F 12 ilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.....elfDriLl 85
+lD+ + Gg T i++ ++ +++A+d+n + + ++ae l+ L +++ + + ++ + l + +fD +L+
tr|A0A2I3T743|A0A2I3T743_PANTR 86 FLDMTFGSGGHTKAILQK-ESDIVLYALDTNPT-AYALAEHLSELYPKQIRAMLGQFSQAEALLMKagvqpGTFDGVLM 162
79**************98.888999*****998.6789**********************9999888898889****** PP
EE--CCG CS
Methyltr_RsmB-F 86 DaPCsgt 92
D Cs++
tr|A0A2I3T743|A0A2I3T743_PANTR 163 DLGCSSM 169
*****86 PP
== domain 2 score: 0.0 bits; conditional E-value: 0.55
HHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEE CS
Methyltr_RsmB-F 121 lsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvel 162
l++a + l++gG lv T s + ++ ++ + L+ d+e
tr|A0A2I3T743|A0A2I3T743_PANTR 267 LKTAQKFLRPGGHLV--TLSFHSLQDCIQVMKTLQLSSDHEN 306
67788899******8..999999999***9999998888875 PP
>> tr|H2PXZ7|H2PXZ7_PANTR DFFA isoform 1 OS=Pan troglodytes OX=9598 GN=DFFA PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.2 0.1 5.1e-05 0.065 82 135 .. 147 206 .. 120 234 .. 0.80
Alignments for each domain:
== domain 1 score: 13.2 bits; conditional E-value: 5.1e-05
EEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHH......HHHHHHHHHHEEEEEEEE CS
Methyltr_RsmB-F 82 riLlDaPCsgtgvirrdpdvklrrkekdiaqlaklq......kellsaaidllkkgGvlv 135
++L+DaPCs + r+ + ++r +++++q+ ++ k+ll+ ++ l k+G l+
tr|H2PXZ7|H2PXZ7_PANTR 147 QVLVDAPCSDLAQELRQSCATVQRLQHTLQQVLDQReevrqsKQLLQLYLQALEKEGSLL 206
79***********99999999999999999886543122222788999999998888886 PP
>> tr|K7BSP4|K7BSP4_PANTR HEMK1 isoform 1 OS=Pan troglodytes OX=9598 GN=HEMK1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.2 0.0 0.00011 0.13 12 75 .. 163 226 .. 158 237 .. 0.84
Alignments for each domain:
== domain 1 score: 12.2 bits; conditional E-value: 0.00011
EEECS-TT-HHH.HHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHH CS
Methyltr_RsmB-F 12 ilDlcaaPGgKT.thiaelmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvl 75
il++ ++ G+ +++++l ++++v+Avd+ + ++ +en +rL ++ + +++ D++ +++
tr|K7BSP4|K7BSP4_PANTR 163 ILEVGCGSGAISlSLLSQL--PQSRVIAVDKGEAAISLTHENAQRLRLQdRIWIIHLDMTSERSWT 226
6777777777542677788..999************************9668899****9887775 PP
>> tr|H2Q437|H2Q437_PANTR AS3MT isoform 1 OS=Pan troglodytes OX=9598 GN=AS3MT PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.3 0.0 0.028 35 8 46 .. 70 108 .. 64 125 .. 0.88
2 ? 5.8 0.0 0.0097 12 109 138 .. 156 185 .. 140 199 .. 0.77
Alignments for each domain:
== domain 1 score: 4.3 bits; conditional E-value: 0.028
TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCH CS
Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRl 46
e+ +ilDl ++ G +++l+ +kg+v+ +d+ k +
tr|H2Q437|H2Q437_PANTR 70 ENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQV 108
6778*****************************988665 PP
== domain 2 score: 5.8 bits; conditional E-value: 0.0097
HHCCHHHHHHHHHHHHHHHEEEEEEEEEEE CS
Methyltr_RsmB-F 109 diaqlaklqkellsaaidllkkgGvlvYsT 138
+++l+ ++++l+ a +lk+gG l +s
tr|H2Q437|H2Q437_PANTR 156 CVINLVPDKQQVLQEAYRVLKHGGELYFSD 185
577889999*****************9885 PP
>> tr|A0A2I3RF95|A0A2I3RF95_PANTR Fibrillarin OS=Pan troglodytes OX=9598 GN=FBL PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.6 0.0 0.00016 0.2 7 87 .. 173 252 .. 168 275 .. 0.80
Alignments for each domain:
== domain 1 score: 11.6 bits; conditional E-value: 0.00016
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEE CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriL 84
+++ ++l l aa G +h+++++ + g v+Av+ +++ + ++ nl + tn+i + Dar+++k+ +++D i
tr|A0A2I3RF95|A0A2I3RF95_PANTR 173 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKK-RTNIIPVIEDARHPHKYRMLiAMVDVIF 249
567789999*************************9866555554.44443.3457788899999999866547788777 PP
EEE CS
Methyltr_RsmB-F 85 lDa 87
D+
tr|A0A2I3RF95|A0A2I3RF95_PANTR 250 ADV 252
775 PP
>> tr|A0A2I3RWY8|A0A2I3RWY8_PANTR Fibrillarin like 1 OS=Pan troglodytes OX=9598 GN=FBLL1 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 11.2 0.0 0.0002 0.26 7 86 .. 166 244 .. 161 260 .. 0.76
Alignments for each domain:
== domain 1 score: 11.2 bits; conditional E-value: 0.0002
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEE CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriL 84
+++ ++l l aa G +h+++++ + g v+Av+ ++ R+ r n+ + tn+i + Dar++ k+ ++D i
tr|A0A2I3RWY8|A0A2I3RWY8_PANTR 166 KPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSH-RAGRDLVNVAKKR-TNIIPVLEDARHPLKYRMLiGMVDVIF 242
56778999**************************975.5555445555433.457788889998876644324566666 PP
EE CS
Methyltr_RsmB-F 85 lD 86
D
tr|A0A2I3RWY8|A0A2I3RWY8_PANTR 243 AD 244
55 PP
>> tr|H2QLD2|H2QLD2_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=4 SV=2
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 9.6 0.0 0.00063 0.81 84 123 .. 9 48 .. 5 78 .. 0.84
2 ? -1.3 0.0 1.4 1.8e+03 143 174 .. 132 163 .. 130 173 .. 0.80
Alignments for each domain:
== domain 1 score: 9.6 bits; conditional E-value: 0.00063
EEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHH CS
Methyltr_RsmB-F 84 LlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsa 123
Ll aPC + + ++++d++++ + d+ + ++ ke +++
tr|H2QLD2|H2QLD2_PANTR 9 LLSAPCRAVYIFSKKHDIQFNFQFVDLLKGHHHSKEYIDI 48
899*****************************99999886 PP
== domain 2 score: -1.3 bits; conditional E-value: 1.4
CTCTHHHHHHHHHH-TTEEEESSBSTTSTTSS CS
Methyltr_RsmB-F 143 veEneevieeaLkkredvelvetelsepkglk 174
ve n ++i++aL+ ed l ++++ +++++
tr|H2QLD2|H2QLD2_PANTR 132 VERNRTAIDQALQWLEDKFLGDRPFLAGQQVT 163
78999999999999999888888777766655 PP
>> tr|K7C690|K7C690_PANTR Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Pan troglodytes OX=9598
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 9.4 0.0 0.00073 0.93 12 43 .. 45 78 .. 39 116 .. 0.78
2 ? -0.7 0.0 0.95 1.2e+03 109 135 .. 126 154 .. 107 155 .. 0.67
Alignments for each domain:
== domain 1 score: 9.4 bits; conditional E-value: 0.00073
EEECS-TT-HHHHHHHHH..TTTTSEEEEEESSC CS
Methyltr_RsmB-F 12 ilDlcaaPGgKTthiael..mknkgtvvAvdank 43
+DlcaaPG+ +++ + +g+vvAvd ++
tr|K7C690|K7C690_PANTR 45 AVDLCAAPGSWSQVLSQKigGQGSGHVVAVDLQA 78
68*************99834456689****9876 PP
== domain 2 score: -0.7 bits; conditional E-value: 0.95
HHCCHHHHHHHH..HHHHHHHEEEEEEEE CS
Methyltr_RsmB-F 109 diaqlaklqkel..lsaaidllkkgGvlv 135
d+ ++++ q l l++a ++lk+gG v
tr|K7C690|K7C690_PANTR 126 DVDEYMQAQLLLaaLNIATHVLKPGGCFV 154
4555544443332277788888***9876 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (200 nodes)
Target sequences: 23008 (11942255 residues searched)
Passed MSV filter: 763 (0.0331624); expected 460.2 (0.02)
Passed bias filter: 536 (0.0232962); expected 460.2 (0.02)
Passed Vit filter: 55 (0.00239047); expected 23.0 (0.001)
Passed Fwd filter: 18 (0.000782337); expected 0.2 (1e-05)
Initial search space (Z): 23008 [actual number of targets]
Domain search space (domZ): 18 [number of targets reported over threshold]
# CPU time: 0.21u 0.01s 00:00:00.22 Elapsed: 00:00:00.09
# Mc/sec: 26538.34
//
[ok]