# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt # target sequence database: proteomes/Pan_troglodytes.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Methyltr_RsmB-F [M=200] Accession: PF01189.16 Description: 16S rRNA methyltransferase RsmB/F Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 6.7e-84 280.9 0.0 1.1e-83 280.2 0.0 1.3 1 tr|A0A2J8JEW0|A0A2J8JEW0_PANTR NOP2 isoform 16 OS=Pan troglodyt 3.4e-45 154.5 0.0 5.2e-45 153.9 0.0 1.4 1 tr|H2Q1P7|H2Q1P7_PANTR NOP2/Sun RNA methyltransferase f 1.3e-38 133.0 0.0 8.9e-35 120.5 0.0 2.3 2 tr|H2R3L8|H2R3L8_PANTR NOP2/Sun RNA methyltransferase f 1.2e-31 110.3 0.0 1.6e-31 109.9 0.0 1.2 1 tr|H2QMZ2|H2QMZ2_PANTR NOP2/Sun RNA methyltransferase f 1.7e-27 96.7 0.0 2.9e-27 96.0 0.0 1.4 1 tr|H2QUP2|H2QUP2_PANTR NOP2/Sun RNA methyltransferase f 2.2e-27 96.4 0.0 3.1e-27 95.9 0.0 1.2 1 tr|H2PYY8|H2PYY8_PANTR NOP2/Sun RNA methyltransferase f 4.3e-27 95.4 0.0 6.5e-27 94.8 0.0 1.3 1 tr|A0A2I3SHR4|A0A2I3SHR4_PANTR Uncharacterized protein OS=Pan t 9.1e-26 91.1 0.0 1.4e-25 90.5 0.0 1.3 1 tr|A0A2I3TKF9|A0A2I3TKF9_PANTR Uncharacterized protein OS=Pan t 4.3e-09 36.7 0.5 1.6e-08 34.8 0.5 1.9 1 tr|H2QPD5|H2QPD5_PANTR NOP2/Sun RNA methyltransferase f 5.4e-05 23.3 0.0 9.9e-05 22.4 0.0 1.4 1 tr|H2Q3C1|H2Q3C1_PANTR METTL15 isoform 3 OS=Pan troglod 0.0028 17.7 0.0 0.019 15.0 0.0 2.0 2 tr|A0A2I3T743|A0A2I3T743_PANTR Uncharacterized protein OS=Pan t ------ inclusion threshold ------ 0.038 14.0 0.1 0.065 13.2 0.1 1.4 1 tr|H2PXZ7|H2PXZ7_PANTR DFFA isoform 1 OS=Pan troglodyte 0.083 12.9 0.0 0.13 12.2 0.0 1.2 1 tr|K7BSP4|K7BSP4_PANTR HEMK1 isoform 1 OS=Pan troglodyt 0.11 12.5 0.0 12 5.8 0.0 2.3 2 tr|H2Q437|H2Q437_PANTR AS3MT isoform 1 OS=Pan troglodyt 0.12 12.4 0.0 0.2 11.6 0.0 1.4 1 tr|A0A2I3RF95|A0A2I3RF95_PANTR Fibrillarin OS=Pan troglodytes O 0.15 12.0 0.0 0.26 11.2 0.0 1.4 1 tr|A0A2I3RWY8|A0A2I3RWY8_PANTR Fibrillarin like 1 OS=Pan troglo 0.23 11.4 0.0 0.81 9.6 0.0 1.7 2 tr|H2QLD2|H2QLD2_PANTR Uncharacterized protein OS=Pan t 0.24 11.4 0.0 0.93 9.4 0.0 1.8 2 tr|K7C690|K7C690_PANTR Putative tRNA (cytidine(32)/guan Domain annotation for each sequence (and alignments): >> tr|A0A2J8JEW0|A0A2J8JEW0_PANTR NOP2 isoform 16 OS=Pan troglodytes OX=9598 GN=NOP2 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 280.2 0.0 8.5e-87 1.1e-83 1 200 [] 410 618 .. 410 618 .. 0.95 Alignments for each domain: == domain 1 score: 280.2 bits; conditional E-value: 8.5e-87 HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC-- CS Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggel 79 +++Lapqe+e+ilD+c+aPGgKT+++a+lmkn+g+++A+dan+eRlk+v+ nl+rLgvtnti++++D+r+++kv+gg tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 410 VMALAPQEHERILDMCCAPGGKTSYMAQLMKNTGVILANDANAERLKSVVGNLHRLGVTNTIISHYDGRQFPKVVGG-- 486 589*************************************************************************9.. PP EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE....EEEEEEEEEES---CTCTHHHHHHHH CS Methyltr_RsmB-F 80 fDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll....kkgGvlvYsTCsvlveEneevieeaL 154 fDr+LlDaPCsgtgvi++dp+vk++++ekdi ++a+lqkell +aid++ k+gG+lvY+TCs++veEne+v+++aL tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 487 FDRVLLDAPCSGTGVISKDPAVKTNKDEKDILRCAHLQKELLLSAIDSVnatsKTGGYLVYCTCSITVEENEWVVDYAL 565 ******************************************************************************* PP HH-TTEEEESSBSTTSTTSSECEEC........T-EEE-TTTTS.-SEEEEEEE CS Methyltr_RsmB-F 155 kkredvelvetelsepkglklgeea........gtlrllPhtenkdgffiaklk 200 kkr +v+lv+t l +++ + ++ +t+r++Pht+n+dgffiak+k tr|A0A2J8JEW0|A0A2J8JEW0_PANTR 566 KKR-NVRLVPTGLDFGQEGFTRFQErrfhpslrSTRRFYPHTHNMDGFFIAKFK 618 **9.9******6654444333333379*************************96 PP >> tr|H2Q1P7|H2Q1P7_PANTR NOP2/Sun RNA methyltransferase family member 6 OS=Pan troglodytes OX=9598 GN=NSUN6 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 153.9 0.0 4e-48 5.2e-45 3 166 .. 224 395 .. 222 459 .. 0.89 Alignments for each domain: == domain 1 score: 153.9 bits; conditional E-value: 4e-48 HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHH.HHCC..........- CS Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidk.vlgg..........e 78 +L+pq++e+ilDlcaaPGgKTthia+lm+++g+v+A+d+ ++++++++n Lg++++ ++ D++k k ++ + e tr|H2Q1P7|H2Q1P7_PANTR 224 VLNPQPGEKILDLCAAPGGKTTHIAALMHDQGEVIALDKIFNKVEKIKQNALLLGLNSIRAFCFDGTKAVKlDMVEdtegeppflpE 310 8****************************************************************9987541344467889****** PP -EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESS CS Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvet 165 fDriLlDaPCsg+g ++p++ + + k++a+++ lq++l++aa++llk++GvlvYsTC+++++Enee+++ aL k + +l++ tr|H2Q1P7|H2Q1P7_PANTR 311 SFDRILLDAPCSGMG---QRPNMASTWSLKEVASYQPLQRKLFTAAVQLLKPEGVLVYSTCTITLAENEEQVAWALTKFPCLQLQPQ 394 *************98...6788888889999***********************************************999999887 PP B CS Methyltr_RsmB-F 166 e 166 e tr|H2Q1P7|H2Q1P7_PANTR 395 E 395 4 PP >> tr|H2R3L8|H2R3L8_PANTR NOP2/Sun RNA methyltransferase family member 2 OS=Pan troglodytes OX=9598 GN=NSUN2 PE=2 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 120.5 0.0 7e-38 8.9e-35 2 159 .. 170 341 .. 169 370 .. 0.88 2 ! 10.3 0.0 0.00041 0.52 156 199 .. 384 427 .. 378 428 .. 0.84 Alignments for each domain: == domain 1 score: 120.5 bits; conditional E-value: 7e-38 HHH---TT-EEEECS-TT-HHHHHHHHHTT.......TTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.... CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmk.......nkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.... 77 llL+ +++ +ilD+caaPG+KTt + e+++ ++g v+A+d++++R +++ krL+ ++v++ Da+ i++ + tr|H2R3L8|H2R3L8_PANTR 170 LLLNVRPHHKILDMCAAPGSKTTQLIEMLHadmnvpfPEGFVIANDVDNKRCYLLVHQAKRLSSPCIMVVNHDASSIPRLQIDvdgr 256 5899***********************976222233347889***********************************9988777789 PP ...--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT CS Methyltr_RsmB-F 78 ...elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred 159 ++DriL D+PCsg g++r++ dv + + + ql+ lq ++ + +++l +gG +vYsTCs+++ E+e+vi+++L+k e tr|H2R3L8|H2R3L8_PANTR 257 keiLFYDRILCDVPCSGDGTMRKNIDVWKKWTTLNSLQLHGLQLRIATRGAEQLAEGGRMVYSTCSLNPIEDEAVIASLLEKSEG 341 987789*********************6666888999*******************************************99864 PP == domain 2 score: 10.3 bits; conditional E-value: 0.00041 H-TTEEEESSBSTTSTTSSECEECT-EEE-TTTTS.-SEEEEEE CS Methyltr_RsmB-F 156 kredvelvetelsepkglklgeeagtlrllPhtenkdgffiakl 199 ++ +++ + ++ ++p++l+ + + lr+lPh++n+ gff+a l tr|H2R3L8|H2R3L8_PANTR 384 RHTQIRPTMFPPKDPEKLQAMHLERCLRILPHHQNTGGFFVAVL 427 56667777778888999888888889****************87 PP >> tr|H2QMZ2|H2QMZ2_PANTR NOP2/Sun RNA methyltransferase family member 3 OS=Pan troglodytes OX=9598 GN=NSUN3 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 109.9 0.0 1.3e-34 1.6e-31 2 199 .. 125 331 .. 124 332 .. 0.80 Alignments for each domain: == domain 1 score: 109.9 bits; conditional E-value: 1.3e-34 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--....SEEEEES-CCCCHHHHCC--EEEEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt....ntivleaDarkidkvlggelfDriL 84 l+L+++++e++lDlcaaPGgK +++ ++ g + ++ ++ Rl+ + ++l+ + + ++v+e D+rk+ + e+fD++L tr|H2QMZ2|H2QMZ2_PANTR 125 LALELRDGEKVLDLCAAPGGKSIALLQC-ACPGYLHCNEYDSLRLRWLRQTLESFIPQplinVIKVSELDGRKMGDAQP-EMFDKVL 209 789************************9.9**********************997544344367899*******88887.5****** PP EEE--CCGG.GTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSB.... CS Methyltr_RsmB-F 85 lDaPCsgtg.virrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvete.... 166 +DaPCs + + k + + ++ +l lq ell +ai+ l++gG+lvYsTC++ +En+ vi e+L+++ ++ ++++ tr|H2QMZ2|H2QMZ2_PANTR 210 VDAPCSNDRsWLFSSDSQKASCRISQRRNLPLLQIELLRSAIKALRPGGILVYSTCTLSKAENQDVISEILNSHGNIMPMDVKgiar 296 ******875156666667777788888999********************************************8765444331111 PP ..STTSTTSSECEECT-EEE-TTTTS..-SEEEEEE CS Methyltr_RsmB-F 167 ..lsepkglklgeeagtlrllPhten.kdgffiakl 199 ++++ + +g+e l ++P++ + ++++akl tr|H2QMZ2|H2QMZ2_PANTR 297 tcSHDFTFAPTGQEC-GLLVIPDKGKaWGPMYVAKL 331 113444444445444.66677766441567888887 PP >> tr|H2QUP2|H2QUP2_PANTR NOP2/Sun RNA methyltransferase family member 5 OS=Pan troglodytes OX=9598 GN=NSUN5 PE=3 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 96.0 0.0 2.3e-30 2.9e-27 1 198 [. 219 421 .. 219 423 .. 0.80 Alignments for each domain: == domain 1 score: 96.0 bits; conditional E-value: 2.3e-30 HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCH.HHHCC--EEEEEEE CS Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkid.kvlggelfDriLlD 86 a+lL+p ++ +++D+caaPG KT+h+a+l+kn+g+++A d +++Rl ++a+ l r gv + e D ++ ++ + + iLlD tr|H2QUP2|H2QUP2_PANTR 219 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSpSDPRYREVHYILLD 305 689********************************************************99999*998776414455589******* PP E--CCGGGTTT-TTHHHH.-CC..HHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTE.EEESS.BSTT CS Methyltr_RsmB-F 87 aPCsgtgvirrdpdvklrrkek..diaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredv.elvet.else 169 Csg g+ +r+ + +++ + +la q++ l a++ + lvYsTCs+ eEne v+ +aL++++ + +l + ++ tr|H2QUP2|H2QUP2_PANTR 306 PSCSGSGMPSRQLEEPGAGTPSpvRLHALAGFQQRALCHALTF-PSLQRLVYSTCSLCQEENEDVVRDALQQNPGAfRLAPAlPAWP 391 ***********98877666655115678888777776665544.34447**********************9986426766422222 PP STTSS..ECEECT-EEE-TTTTS.-SEEEEE CS Methyltr_RsmB-F 170 pkglk..lgeeagtlrllPhtenkdgffiak 198 +gl+ g e+ lr P+t gff+a tr|H2QUP2|H2QUP2_PANTR 392 HRGLStfPGAEH-CLRASPETTLSGGFFVAV 421 233321134444.899999999999999996 PP >> tr|H2PYY8|H2PYY8_PANTR NOP2/Sun RNA methyltransferase family member 4 OS=Pan troglodytes OX=9598 GN=NSUN4 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 95.9 0.0 2.5e-30 3.1e-27 2 169 .. 167 340 .. 166 352 .. 0.84 Alignments for each domain: == domain 1 score: 95.9 bits; conditional E-value: 2.5e-30 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--......SEEEEES-CCCCHHHHCC--EEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt......ntivleaDarkidkvlggelfDr 82 l+L +q+++ +lDlcaaPGgKT +++ + ++ A+d + +R+ r+++ l+ + ++ v++ D+rk + g+ ++Dr tr|H2PYY8|H2PYY8_PANTR 167 LALGLQPGDIVLDLCAAPGGKTLALLQT-GCCRNLAANDLSPSRIARLQKILHSYVPEeirdgnQVRVTSWDGRKWGELEGD-TYDR 251 67999**********************9.999*****************999976444344554689*********888885.**** PP EEEEE--CCG..GGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBS CS Methyltr_RsmB-F 83 iLlDaPCsgt..gvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetel 167 +L+D+PC++ + ++++ r ++k+ + l lq +ll a + +k+gG +vYsTCs+ ne v++ a++ ++ ++++++ tr|H2PYY8|H2PYY8_PANTR 252 VLVDVPCTTDrhSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLANQYSIQVQV 338 *******98621445556667444455566667889***********************************9999888887777776 PP TT CS Methyltr_RsmB-F 168 se 169 ++ tr|H2PYY8|H2PYY8_PANTR 339 ED 340 65 PP >> tr|A0A2I3SHR4|A0A2I3SHR4_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 94.8 0.0 5.1e-30 6.5e-27 1 198 [. 201 403 .. 201 405 .. 0.81 Alignments for each domain: == domain 1 score: 94.8 bits; conditional E-value: 5.1e-30 HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.- CS Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.e 78 a+lL+p ++ +++D+caaPG KT+h+a+l+kn+g+++A d +++Rl ++a+ l r gv + e D ++ + tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 201 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPLDPRyR 279 689****************************************************************887754433348 PP -EEEEEEEE--CCGGGTTT-TTHH..HH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHH CS Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvk..lrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLk 155 + +LlD Csg g+ +r+ + + +++ + +la q++ l a++ + lvYsTCs+ eEne ++ +aL+ tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 280 EVHYVLLDPSCSGSGMPSRQLEEPgtGTPSPARLHALAGFQQRALCHALTFP-SLQRLVYSTCSLCQEENEDMVRDALQ 357 8*****************9977641145678999999999888777666543.4457********************** PP H-TTE.EEESS.BSTTSTTSS..ECEECT-EEE-TTTTS.-SEEEEE CS Methyltr_RsmB-F 156 kredv.elvet.elsepkglk..lgeeagtlrllPhtenkdgffiak 198 +++ + +l + ++ +gl+ g e+ lr P+t gff+a tr|A0A2I3SHR4|A0A2I3SHR4_PANTR 358 QNPGAfRLAPAlPAWPHRGLStfPGAEH-CLRASPKTTLSGGFFVAV 403 9986426766422222233321134444.899999999999999996 PP >> tr|A0A2I3TKF9|A0A2I3TKF9_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 90.5 0.0 1.1e-28 1.4e-25 1 198 [. 201 403 .. 201 405 .. 0.81 Alignments for each domain: == domain 1 score: 90.5 bits; conditional E-value: 1.1e-28 HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.- CS Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.e 78 a+lL+p ++ +++D+caaPG KT+h+a+l+kn+g+++A d +++Rl ++a+ l r gv + e D ++ + tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 201 AMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPLDPRyR 279 689****************************************************************887754433348 PP -EEEEEEEE--CCGGGTTT-TTHH..HH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHH CS Methyltr_RsmB-F 79 lfDriLlDaPCsgtgvirrdpdvk..lrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLk 155 + +LlD Csg g+ +r+ + + +++ + +la q++ l a++ + lvYs Cs+ eEne ++ +aL+ tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 280 EVHYVLLDPSCSGSGMPSRQLEEPgaGTPSPARLHALAGFQQRALCHALTFP-SLQRLVYSMCSLCQEENEDMVRDALQ 357 8*****************9876541145678999999999888777666543.4457********************** PP H-TTE.EEESS.BSTTSTTSS..ECEECT-EEE-TTTTS.-SEEEEE CS Methyltr_RsmB-F 156 kredv.elvet.elsepkglk..lgeeagtlrllPhtenkdgffiak 198 +++ + +l + ++ +gl+ g e+ lr P+t gff+a tr|A0A2I3TKF9|A0A2I3TKF9_PANTR 358 QNPGAfRLAPAlPAWPHRGLStfPGAEH-CLRASPKTTLSGGFFVAV 403 9986426766422222233321134444.899999999999999996 PP >> tr|H2QPD5|H2QPD5_PANTR NOP2/Sun RNA methyltransferase family member 7 OS=Pan troglodytes OX=9598 GN=NSUN7 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.8 0.5 1.3e-11 1.6e-08 24 156 .. 308 456 .. 290 465 .. 0.77 Alignments for each domain: == domain 1 score: 34.8 bits; conditional E-value: 1.3e-11 HHHHHH.TTTTSEEEEEESSCC.CHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEEEEE--CCGGG.......TTT-TT CS Methyltr_RsmB-F 24 thiael.mknkgtvvAvdanke.RlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriLlDaPCsgtgv.......irrdpd 100 +h++ l ++n+++v+ ++++ + +++ +++g++n+ +l+ +id+ +++ iLl Csg+gv ++ ++d tr|H2QPD5|H2QPD5_PANTR 308 AHMSILtNNNTSKVFVCGVQSQaKDPDLKTLFTKIGCKNIEILHETFINIDSKDHRlQKVKVILLLPRCSGLGVsnpvefiLNEHED 394 67777755667777766655541566899999************999999877666688999999999*****74444443678899 PP HHHH.-CCH.......HCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH CS Methyltr_RsmB-F 101 vklrrkekd.......iaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkk 156 ++++ ++ + la++q e l+ a++ +k++ +vY+TCsv +eEne+v+++aL+ tr|H2QPD5|H2QPD5_PANTR 395 TEFLKDHSQggisvdkLHVLAQQQYEQLTHAMKFTKAQ-AVVYCTCSVFPEENEAVVKKALEF 456 98888765322221125667888999999999999987.689******************975 PP >> tr|H2Q3C1|H2Q3C1_PANTR METTL15 isoform 3 OS=Pan troglodytes OX=9598 GN=METTL15 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.4 0.0 7.8e-08 9.9e-05 2 92 .. 82 175 .. 81 189 .. 0.91 Alignments for each domain: == domain 1 score: 22.4 bits; conditional E-value: 7.8e-08 HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.....--EEEE CS Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.....elfDri 83 +L pq+++ +lD+ + Gg T i++ ++ +++A+d++ + + ++ae l+ L +++ + + ++ + l + +fD + tr|H2Q3C1|H2Q3C1_PANTR 82 HCLSPQKGQIFLDMTFGSGGHTKAILQK-ESDIVLYALDRDPT-AYALAEHLSELYPKQIRAMLGQFSQAEALLMKagvqpGTFDGV 166 579***********************98.888999*****998.6789**********************9999888898889**** PP EEEE--CCG CS Methyltr_RsmB-F 84 LlDaPCsgt 92 L+D Cs++ tr|H2Q3C1|H2Q3C1_PANTR 167 LMDLGCSSM 175 *******86 PP >> tr|A0A2I3T743|A0A2I3T743_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.0 0.0 1.4e-05 0.019 12 92 .. 86 169 .. 78 206 .. 0.91 2 ? 0.0 0.0 0.55 7.1e+02 121 162 .. 267 306 .. 258 314 .. 0.86 Alignments for each domain: == domain 1 score: 15.0 bits; conditional E-value: 1.4e-05 EEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.....--EEEEEE CS Methyltr_RsmB-F 12 ilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.....elfDriLl 85 +lD+ + Gg T i++ ++ +++A+d+n + + ++ae l+ L +++ + + ++ + l + +fD +L+ tr|A0A2I3T743|A0A2I3T743_PANTR 86 FLDMTFGSGGHTKAILQK-ESDIVLYALDTNPT-AYALAEHLSELYPKQIRAMLGQFSQAEALLMKagvqpGTFDGVLM 162 79**************98.888999*****998.6789**********************9999888898889****** PP EE--CCG CS Methyltr_RsmB-F 86 DaPCsgt 92 D Cs++ tr|A0A2I3T743|A0A2I3T743_PANTR 163 DLGCSSM 169 *****86 PP == domain 2 score: 0.0 bits; conditional E-value: 0.55 HHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEE CS Methyltr_RsmB-F 121 lsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvel 162 l++a + l++gG lv T s + ++ ++ + L+ d+e tr|A0A2I3T743|A0A2I3T743_PANTR 267 LKTAQKFLRPGGHLV--TLSFHSLQDCIQVMKTLQLSSDHEN 306 67788899******8..999999999***9999998888875 PP >> tr|H2PXZ7|H2PXZ7_PANTR DFFA isoform 1 OS=Pan troglodytes OX=9598 GN=DFFA PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.2 0.1 5.1e-05 0.065 82 135 .. 147 206 .. 120 234 .. 0.80 Alignments for each domain: == domain 1 score: 13.2 bits; conditional E-value: 5.1e-05 EEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHH......HHHHHHHHHHEEEEEEEE CS Methyltr_RsmB-F 82 riLlDaPCsgtgvirrdpdvklrrkekdiaqlaklq......kellsaaidllkkgGvlv 135 ++L+DaPCs + r+ + ++r +++++q+ ++ k+ll+ ++ l k+G l+ tr|H2PXZ7|H2PXZ7_PANTR 147 QVLVDAPCSDLAQELRQSCATVQRLQHTLQQVLDQReevrqsKQLLQLYLQALEKEGSLL 206 79***********99999999999999999886543122222788999999998888886 PP >> tr|K7BSP4|K7BSP4_PANTR HEMK1 isoform 1 OS=Pan troglodytes OX=9598 GN=HEMK1 PE=2 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.2 0.0 0.00011 0.13 12 75 .. 163 226 .. 158 237 .. 0.84 Alignments for each domain: == domain 1 score: 12.2 bits; conditional E-value: 0.00011 EEECS-TT-HHH.HHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCCHHHH CS Methyltr_RsmB-F 12 ilDlcaaPGgKT.thiaelmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarkidkvl 75 il++ ++ G+ +++++l ++++v+Avd+ + ++ +en +rL ++ + +++ D++ +++ tr|K7BSP4|K7BSP4_PANTR 163 ILEVGCGSGAISlSLLSQL--PQSRVIAVDKGEAAISLTHENAQRLRLQdRIWIIHLDMTSERSWT 226 6777777777542677788..999************************9668899****9887775 PP >> tr|H2Q437|H2Q437_PANTR AS3MT isoform 1 OS=Pan troglodytes OX=9598 GN=AS3MT PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.3 0.0 0.028 35 8 46 .. 70 108 .. 64 125 .. 0.88 2 ? 5.8 0.0 0.0097 12 109 138 .. 156 185 .. 140 199 .. 0.77 Alignments for each domain: == domain 1 score: 4.3 bits; conditional E-value: 0.028 TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCH CS Methyltr_RsmB-F 8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRl 46 e+ +ilDl ++ G +++l+ +kg+v+ +d+ k + tr|H2Q437|H2Q437_PANTR 70 ENCWILDLGSGSGRDCYVLSQLVGEKGHVTGIDMTKGQV 108 6778*****************************988665 PP == domain 2 score: 5.8 bits; conditional E-value: 0.0097 HHCCHHHHHHHHHHHHHHHEEEEEEEEEEE CS Methyltr_RsmB-F 109 diaqlaklqkellsaaidllkkgGvlvYsT 138 +++l+ ++++l+ a +lk+gG l +s tr|H2Q437|H2Q437_PANTR 156 CVINLVPDKQQVLQEAYRVLKHGGELYFSD 185 577889999*****************9885 PP >> tr|A0A2I3RF95|A0A2I3RF95_PANTR Fibrillarin OS=Pan troglodytes OX=9598 GN=FBL PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.6 0.0 0.00016 0.2 7 87 .. 173 252 .. 168 275 .. 0.80 Alignments for each domain: == domain 1 score: 11.6 bits; conditional E-value: 0.00016 -TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEE CS Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriL 84 +++ ++l l aa G +h+++++ + g v+Av+ +++ + ++ nl + tn+i + Dar+++k+ +++D i tr|A0A2I3RF95|A0A2I3RF95_PANTR 173 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLI-NLAKK-RTNIIPVIEDARHPHKYRMLiAMVDVIF 249 567789999*************************9866555554.44443.3457788899999999866547788777 PP EEE CS Methyltr_RsmB-F 85 lDa 87 D+ tr|A0A2I3RF95|A0A2I3RF95_PANTR 250 ADV 252 775 PP >> tr|A0A2I3RWY8|A0A2I3RWY8_PANTR Fibrillarin like 1 OS=Pan troglodytes OX=9598 GN=FBLL1 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.2 0.0 0.0002 0.26 7 86 .. 166 244 .. 161 260 .. 0.76 Alignments for each domain: == domain 1 score: 11.2 bits; conditional E-value: 0.0002 -TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC.--EEEEE CS Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg.elfDriL 84 +++ ++l l aa G +h+++++ + g v+Av+ ++ R+ r n+ + tn+i + Dar++ k+ ++D i tr|A0A2I3RWY8|A0A2I3RWY8_PANTR 166 KPKSKVLYLGAASGTTVSHVSDIIGPDGLVYAVEFSH-RAGRDLVNVAKKR-TNIIPVLEDARHPLKYRMLiGMVDVIF 242 56778999**************************975.5555445555433.457788889998876644324566666 PP EE CS Methyltr_RsmB-F 85 lD 86 D tr|A0A2I3RWY8|A0A2I3RWY8_PANTR 243 AD 244 55 PP >> tr|H2QLD2|H2QLD2_PANTR Uncharacterized protein OS=Pan troglodytes OX=9598 PE=4 SV=2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.6 0.0 0.00063 0.81 84 123 .. 9 48 .. 5 78 .. 0.84 2 ? -1.3 0.0 1.4 1.8e+03 143 174 .. 132 163 .. 130 173 .. 0.80 Alignments for each domain: == domain 1 score: 9.6 bits; conditional E-value: 0.00063 EEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHH CS Methyltr_RsmB-F 84 LlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsa 123 Ll aPC + + ++++d++++ + d+ + ++ ke +++ tr|H2QLD2|H2QLD2_PANTR 9 LLSAPCRAVYIFSKKHDIQFNFQFVDLLKGHHHSKEYIDI 48 899*****************************99999886 PP == domain 2 score: -1.3 bits; conditional E-value: 1.4 CTCTHHHHHHHHHH-TTEEEESSBSTTSTTSS CS Methyltr_RsmB-F 143 veEneevieeaLkkredvelvetelsepkglk 174 ve n ++i++aL+ ed l ++++ +++++ tr|H2QLD2|H2QLD2_PANTR 132 VERNRTAIDQALQWLEDKFLGDRPFLAGQQVT 163 78999999999999999888888777766655 PP >> tr|K7C690|K7C690_PANTR Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Pan troglodytes OX=9598 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 9.4 0.0 0.00073 0.93 12 43 .. 45 78 .. 39 116 .. 0.78 2 ? -0.7 0.0 0.95 1.2e+03 109 135 .. 126 154 .. 107 155 .. 0.67 Alignments for each domain: == domain 1 score: 9.4 bits; conditional E-value: 0.00073 EEECS-TT-HHHHHHHHH..TTTTSEEEEEESSC CS Methyltr_RsmB-F 12 ilDlcaaPGgKTthiael..mknkgtvvAvdank 43 +DlcaaPG+ +++ + +g+vvAvd ++ tr|K7C690|K7C690_PANTR 45 AVDLCAAPGSWSQVLSQKigGQGSGHVVAVDLQA 78 68*************99834456689****9876 PP == domain 2 score: -0.7 bits; conditional E-value: 0.95 HHCCHHHHHHHH..HHHHHHHEEEEEEEE CS Methyltr_RsmB-F 109 diaqlaklqkel..lsaaidllkkgGvlv 135 d+ ++++ q l l++a ++lk+gG v tr|K7C690|K7C690_PANTR 126 DVDEYMQAQLLLaaLNIATHVLKPGGCFV 154 4555544443332277788888***9876 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (200 nodes) Target sequences: 23008 (11942255 residues searched) Passed MSV filter: 763 (0.0331624); expected 460.2 (0.02) Passed bias filter: 536 (0.0232962); expected 460.2 (0.02) Passed Vit filter: 55 (0.00239047); expected 23.0 (0.001) Passed Fwd filter: 18 (0.000782337); expected 0.2 (1e-05) Initial search space (Z): 23008 [actual number of targets] Domain search space (domZ): 18 [number of targets reported over threshold] # CPU time: 0.21u 0.01s 00:00:00.22 Elapsed: 00:00:00.09 # Mc/sec: 26538.34 // [ok]