# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database: proteomes/Tetrahymena_thermophila.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltr_RsmB-F [M=200]
Accession: PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
1.2e-68 231.2 0.3 1.2e-68 231.2 0.3 2.7 4 tr|Q22HF4|Q22HF4_TETTS NOL1/NOP2/sun family RNA methylase, p
7.1e-40 137.4 0.1 5.8e-39 134.4 0.1 2.4 1 tr|Q22N15|Q22N15_TETTS NOL1/NOP2/sun family protein OS=Tetra
5.3e-35 121.5 0.0 1.2e-32 113.8 0.0 2.5 1 tr|I7MAM9|I7MAM9_TETTS NOL1/NOP2/sun family protein OS=Tetra
4e-30 105.5 4.4 2.2e-15 57.4 3.6 2.6 2 tr|I7M457|I7M457_TETTS NOL1/NOP2/sun family protein OS=Tetra
1.3e-27 97.4 0.0 2.9e-27 96.2 0.0 1.6 1 tr|I7M9J8|I7M9J8_TETTS NOL1/NOP2/Sun family protein OS=Tetra
1.9e-22 80.5 0.0 1.6e-10 41.5 0.0 2.5 2 tr|Q240Z2|Q240Z2_TETTS NOL1/NOP2/sun family protein OS=Tetra
------ inclusion threshold ------
0.028 14.6 0.1 0.08 13.2 0.1 1.8 1 tr|I7MGM4|I7MGM4_TETTS Putative tRNA (cytidine(32)/guanosine
0.031 14.5 2.6 0.24 11.6 0.0 2.8 3 tr|I7MGH3|I7MGH3_TETTS RNA cap guanine-N2 methyltransferase
0.074 13.3 0.0 0.26 11.5 0.0 1.9 2 tr|I7MFA3|I7MFA3_TETTS rRNA 2'-O-methyltransferase fibrillar
0.1 12.8 0.0 0.16 12.2 0.0 1.3 1 tr|Q24E29|Q24E29_TETTS UbiE/COQ5 family methyltransferase OS
Domain annotation for each sequence (and alignments):
>> tr|Q22HF4|Q22HF4_TETTS NOL1/NOP2/sun family RNA methylase, putative OS=Tetrahymena thermophila (strain SB210) OX=312
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 231.2 0.3 4.6e-72 1.2e-68 1 200 [] 267 471 .. 267 471 .. 0.94
2 ? -2.8 0.8 2.2 6e+03 162 162 .. 592 592 .. 549 633 .. 0.58
3 ? -5.5 4.3 10 2.7e+04 161 161 .. 644 644 .. 580 695 .. 0.59
4 ? -3.0 1.1 2.6 7e+03 145 155 .. 702 712 .. 660 750 .. 0.56
Alignments for each domain:
== domain 1 score: 231.2 bits; conditional E-value: 4.6e-72
HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS
Methyltr_RsmB-F 1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87
+++Lapq++e+ilD++aaPGgKTt+ia+lmkn+g+++A+d+++ R k+++ n++r+g++n iv+++D+rk +kv+ + Dr+LlDa
tr|Q22HF4|Q22HF4_TETTS 267 VIALAPQPNEKILDMAAAPGGKTTYIAQLMKNTGVLFANDVKADRNKALIFNVQRMGINNCIVTNYDGRKLNKVIHN--CDRVLLDA 351
589************************************************************************97..******** PP
--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTSTTSS CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkglk 174
PC+g+g+i rdp+vk +++ d+++ a+lq+el+ +aid kkgG++vYsTCsv+v+Ene v+++aLk+r v+lv++ ++ +++
tr|Q22HF4|Q22HF4_TETTS 352 PCTGLGIIARDPSVKATKQLIDVQKHAHLQRELILSAIDCCKKGGYVVYSTCSVTVQENESVVDYALKNR-FVKLVDMGIEVGEEGY 437
*********************************************************************9.8999999766544444 PP
ECEEC........T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 175 lgeea........gtlrllPhtenkdgffiaklk 200
++ + +t+r+lPh +n+dgf++aklk
tr|Q22HF4|Q22HF4_TETTS 438 TKYQDkrfdpqlkKTRRILPHVHNMDGFYVAKLK 471
4433367999*999******************96 PP
== domain 2 score: -2.8 bits; conditional E-value: 2.2
E CS
Methyltr_RsmB-F 162 l 162
+
tr|Q22HF4|Q22HF4_TETTS 592 S 592
1 PP
== domain 3 score: -5.5 bits; conditional E-value: 10
E CS
Methyltr_RsmB-F 161 e 161
+
tr|Q22HF4|Q22HF4_TETTS 644 A 644
1 PP
== domain 4 score: -3.0 bits; conditional E-value: 2.6
CTHHHHHHHHH CS
Methyltr_RsmB-F 145 EneevieeaLk 155
E++ev e+a k
tr|Q22HF4|Q22HF4_TETTS 702 EEVEVEEKAEK 712
33333333333 PP
>> tr|Q22N15|Q22N15_TETTS NOL1/NOP2/sun family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 134.4 0.1 2.2e-42 5.8e-39 3 200 .] 246 484 .. 244 484 .. 0.89
Alignments for each domain:
== domain 1 score: 134.4 bits; conditional E-value: 2.2e-42
HH---TT-EEEECS-TT-HHHHHHHHH.T.TTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiael.m.knkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87
l++ q++e+ilD+caaPG+KT ++e m n++ ++A+d++k+R+ +a + +L+ t + +++ D +k++kv fD++L D+
tr|Q22N15|Q22N15_TETTS 246 LIDAQPNEKILDMCAAPGSKTKQMLESmMkGNESLLFANDISKKRAFMLAFHVLKLNATCAVLTSNDCTKYPKVEQ---FDKVLCDV 329
67899*****************99985241578889***********************************98865...******** PP
--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH.-TTEEEESSBSTTSTTS CS
Methyltr_RsmB-F 88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkk.redvelvetelsepkgl 173
PCsg g+ir+++ + r + k ++l+ lq ll a+ l+kkgG +vYsTCs+++ Ene v+ +aL+ ++ v+++++ ++ g
tr|Q22N15|Q22N15_TETTS 330 PCSGDGTIRKQKLILKRWSSKLGKNLHCLQLSLLLRALYLVKKGGSVVYSTCSLNPMENESVVSAALRIlKPYVKIIDV-KDKFPGF 415
**************77777777899******************************************963667777777.4445566 PP
SECEEC..........................................T-EEE-TTTTS.-SEEEEEEE CS
Methyltr_RsmB-F 174 klgeea..........................................gtlrllPhtenkdgffiaklk 200
k++ + g lr+ Ph +++ gff+a l+
tr|Q22N15|Q22N15_TETTS 416 KFSPTLskwpvvqkkitnaywsyesiddvyglkgkkifdtmfpqedvqGCLRITPHMNDTGGFFVAYLQ 484
666555788999999********************************999***************9885 PP
>> tr|I7MAM9|I7MAM9_TETTS NOL1/NOP2/sun family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 113.8 0.0 4.4e-36 1.2e-32 2 197 .. 251 527 .. 250 530 .. 0.77
Alignments for each domain:
== domain 1 score: 113.8 bits; conditional E-value: 4.4e-36
HHH---TT-EEEECS-TT-HHHHHHHHHT......TTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC..... CS
Methyltr_RsmB-F 2 llLapqeeetilDlcaaPGgKTthiaelm......knkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg..... 77
llL+ ++++ i+D+caaPG+KT+ ++elm ++kg vvA+d++++R+ +++ + r++ + v++ a+ +++
tr|I7MAM9|I7MAM9_TETTS 251 LLLDVKPDDIIFDMCAAPGSKTAQLLELMytqggiNTKGAVVANDVDQKRAYLLTHQVCRINPSGLVVINHPAQFFPTLQDPtsnqa 337
58999***********************9333333346789***********************99999988877665443344567 PP
....--EEEEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTE CS
Methyltr_RsmB-F 78 ....elfDriLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkredv 160
fD++ D+PCsg g+ r+ p + + +d + l+ lq ++l+ a++l k gG+++YsTCs+++ E+e+vi ea ++ +
tr|I7MAM9|I7MAM9_TETTS 338 ydqkFYFDKVQADVPCSGDGATRKIPTQWRNWNTRDGQVLHPLQLAILQRALTLCKVGGYVLYSTCSINPIEDEAVITEAFRRASQG 424
776678********************98667788999********************************************998765 PP
EEESSBSTTSTTSSECEEC..................................................................T- CS
Methyltr_RsmB-F 161 elvetelsepkglklgeea..................................................................gt 181
++ ++++ g+ +t
tr|I7MAM9|I7MAM9_TETTS 425 SIELIDIHTKFPELKGRRGlskwtvcsstkkhpghdqekketvadwlkiydnfesiekndklaqfvrdsmfpepedkmtneikiqNT 511
544444433221111221134466777777777777777777777777777777777777777777777777777777777777667 PP
EEE-TTTTS.-SEEEE CS
Methyltr_RsmB-F 182 lrllPhtenkdgffia 197
+r+lPh +++ gf++a
tr|I7MAM9|I7MAM9_TETTS 512 MRILPHDQDTGGFYLA 527
7777777777777766 PP
>> tr|I7M457|I7M457_TETTS NOL1/NOP2/sun family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 57.4 3.6 8.1e-19 2.2e-15 3 130 .. 127 252 .. 125 324 .. 0.79
2 ! 46.3 0.0 2.1e-15 5.7e-12 109 199 .. 376 470 .. 369 471 .. 0.81
Alignments for each domain:
== domain 1 score: 57.4 bits; conditional E-value: 8.1e-19
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEE.EEES-CCCCHHHHCC--EEEEEEEE- CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtnti.vleaDarkidkvlggelfDriLlDaP 88
L+pq++e++lDlc+ PG K ia+++ +g+ + vd+n++Rl+ + +k+ + ++i + aD++ ++k +++fDr+L+Da
tr|I7M457|I7M457_TETTS 127 SLDPQKGEKVLDLCCCPGMKLCNIADIIGAEGKAFGVDINETRLNTCRSIVKKYKLDHIIkLELADGTTYNK---ESQFDRVLVDAE 210
69******************************************************9755144577777755...456********* PP
-CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE.EE CS
Methyltr_RsmB-F 89 Csgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll.kk 130
C+ g +++ + ++ +++ i +++ ke ++ + l kk
tr|I7M457|I7M457_TETTS 211 CTHDGSLKHLAKF-IKNQKAVIEDMQNNAKETIDNNEQNLdKK 252
*****99887766.67777888888888888888776666554 PP
== domain 2 score: 46.3 bits; conditional E-value: 2.1e-15
HHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT.EEEES...SBSTTSTTSSECEECT-EEE-TTTTS. CS
Methyltr_RsmB-F 109 diaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred.velve...telsepkglklgeeagtlrllPhtenk 191
+++++ lqk+ll+ ++l k+gG++vYsTCs + + ne v+e +L++ +d ve+++ ++s++ k g ++t+r+ P ++
tr|I7M457|I7M457_TETTS 376 KLQNIVDLQKKLLTNGFKLCKEGGYIVYSTCSFARNQNEDVVEWFLNEFKDqVESIHpfnNDVSNMPACKPGFIQNTVRFDPFVSKS 462
577899****************************************996551554431112344445566677679*********** PP
-SEEEEEE CS
Methyltr_RsmB-F 192 dgffiakl 199
g+f++k+
tr|I7M457|I7M457_TETTS 463 GGMFVSKF 470
******98 PP
>> tr|I7M9J8|I7M9J8_TETTS NOL1/NOP2/Sun family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 96.2 0.0 1.1e-30 2.9e-27 6 165 .. 209 368 .. 204 390 .. 0.86
Alignments for each domain:
== domain 1 score: 96.2 bits; conditional E-value: 1.1e-30
--TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE--CCG CS
Methyltr_RsmB-F 6 pqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPCsgt 92
q ++++lD ca+ GgK a +k +g+++ d+ + l++ ++ ++ g++n++ + + + +k ++fD + D+PC+gt
tr|I7M9J8|I7M9J8_TETTS 209 CQIGDHVLDYCAGAGGKSLAFAPYLKGTGQIYLHDTRDYILQEAKKRFNKAGIQNVQFHTQESLNNNKNKLVKKFDWVVCDVPCTGT 295
56789*****************************************************999988888887778************** PP
GGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEE.EEEEEEEES---CTCTHHHHHHHHHH-TTEEEESS CS
Methyltr_RsmB-F 93 gvirrdpdvklrrkekdiaqlaklqkellsaaidllkk.gGvlvYsTCsvlveEneevieeaLkkredvelvet 165
g++rr+pd+k++ + + +++++ lq +++ a++ +k+ G +vYsTCs+l eEn +i ++ k+ + e+v+
tr|I7M9J8|I7M9J8_TETTS 296 GTLRRNPDLKYKFSRNRLKYFVDLQASVFKEALPFVKPkTGKIVYSTCSLLQEENIFQITKFCKEF-NLEVVDG 368
************************************9527**********************9876.4444443 PP
>> tr|Q240Z2|Q240Z2_TETTS NOL1/NOP2/sun family protein OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTHERM_00
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 41.5 0.0 6e-14 1.6e-10 9 97 .. 241 329 .. 235 369 .. 0.84
2 ! 36.4 0.0 2.2e-12 5.9e-09 107 200 .] 369 465 .. 353 465 .. 0.77
Alignments for each domain:
== domain 1 score: 41.5 bits; conditional E-value: 6e-14
T-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--S.EEEEES-CCCCHHHHCC--EEEEEEEE--CCGGG CS
Methyltr_RsmB-F 9 eetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtn.tivleaDarkidkvlggelfDriLlDaPCsgtgv 94
i+D c+aPG KT ae +k +g+v+A ++n++R + ++e +++ g ++ + +l+ D +d + ++ D Csgtg+
tr|Q240Z2|Q240Z2_TETTS 241 SFDIIDCCSAPGNKTMQAAEYIKGRGKVFAFEKNQQRFELLKERVQKYGFEQvISCLNEDFLSVDVTQY-PNVEYFVADPSCSGTGM 326
4569**********************************************9615588999998865544.589999**********9 PP
TTT CS
Methyltr_RsmB-F 95 irr 97
+++
tr|Q240Z2|Q240Z2_TETTS 327 LNH 329
875 PP
== domain 2 score: 36.4 bits; conditional E-value: 2.2e-12
CCHHCCHHHHHHHHHHHHHH..HEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESS....BSTTSTTSSECEECT-EEE-TT CS
Methyltr_RsmB-F 107 ekdiaqlaklqkellsaaid..llkkgGvlvYsTCsvlveEneevieeaLkkredvelvet....elsepkglklgeeagtlrllPh 187
++ i l + q ++l+ +++ ++k YsTCs++ +Ene v+ ++L++++ +lve ++ ++k +l +++ +r+ P
tr|Q240Z2|Q240Z2_TETTS 369 KQRIVGLGQFQLKILNKLATfpSIK---AFSYSTCSIHQQENEDVVFKFLQENKSFQLVEAcpqwKTRGFKTKNLPDGNKCIRFNPF 452
5567777778888887554411444...468**************************998622124455556666666699****** PP
TTS.-SEEEEEEE CS
Methyltr_RsmB-F 188 tenkdgffiaklk 200
+++ dgff+a ++
tr|Q240Z2|Q240Z2_TETTS 453 EDKSDGFFVALFQ 465
**********885 PP
>> tr|I7MGM4|I7MGM4_TETTS Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase OS=Tetrahymena thermophila
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.2 0.1 2.9e-05 0.08 7 83 .. 40 109 .. 38 164 .. 0.65
Alignments for each domain:
== domain 1 score: 13.2 bits; conditional E-value: 2.9e-05
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHT.T--SEEEEES-CCCCHHHHCC--EEEE CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrL.gvtntivleaDarkidkvlggelfDri 83
++ e+++DlcaaPG+ +++ + +kg d n e ++ + +l+ + ++ n+ l++D++k + ++D i
tr|I7MGM4|I7MGM4_TETTS 40 ENAERVIDLCAAPGSWSQVVSKKLTEKGLFK--DSNGEDVRIISIDLQEMaPIDNVVQLQGDITKKE------TVDEI 109
6889************999999888887665..5555555555555666525667777888887763......34444 PP
>> tr|I7MGH3|I7MGH3_TETTS RNA cap guanine-N2 methyltransferase OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=T
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -3.5 0.4 3.8 1e+04 33 65 .. 32 64 .. 27 70 .. 0.76
2 ? 11.6 0.0 8.9e-05 0.24 11 68 .. 322 378 .. 313 395 .. 0.82
3 ? 1.9 0.1 0.086 2.3e+02 101 134 .. 538 570 .. 528 572 .. 0.83
Alignments for each domain:
== domain 1 score: -3.5 bits; conditional E-value: 3.8
TSEEEEEESSCCCHHHHHHHHHHTT--SEEEEE CS
Methyltr_RsmB-F 33 kgtvvAvdankeRlkrvaenlkrLgvtntivle 65
+t+ +d + + l+ ++ ++ L vt+t + +
tr|I7MGH3|I7MGH3_TETTS 32 MKTINTNDESISQLQDTKHYTNNLTVTKTDIQN 64
567788888888888888888888888777654 PP
== domain 2 score: 11.6 bits; conditional E-value: 8.9e-05
EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHT..T--SEEEEES-C CS
Methyltr_RsmB-F 11 tilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrL..gvtntivleaDa 68
++D+c++ Gg T +++ ++ v+Avd++ + +k +en+k v n+ ++aD
tr|I7MGH3|I7MGH3_TETTS 322 ILIDACCGIGGNTVQFSKI---NKFVFAVDQSYRAIKTCNENIKNHkqDVSNVEFIQADF 378
578**********999999...889*****************975411555777777775 PP
== domain 3 score: 1.9 bits; conditional E-value: 0.086
HHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEE CS
Methyltr_RsmB-F 101 vklrrkekdiaqlaklqkellsaaidllkkgGvl 134
++ + k di+ l ++qk+ll++ d l k+G++
tr|I7MGH3|I7MGH3_TETTS 538 IRCLAKSIDINDL-QKQKNLLNSFSDELEKEGII 570
5666677788776.689***********999986 PP
>> tr|I7MFA3|I7MFA3_TETTS rRNA 2'-O-methyltransferase fibrillarin OS=Tetrahymena thermophila (strain SB210) OX=312017 G
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? -1.8 0.0 1.1 3e+03 132 152 .. 93 113 .. 82 121 .. 0.84
2 ? 11.5 0.0 9.8e-05 0.26 7 75 .. 137 203 .. 133 222 .. 0.72
Alignments for each domain:
== domain 1 score: -1.8 bits; conditional E-value: 1.1
EEEEEEES---CTCTHHHHHH CS
Methyltr_RsmB-F 132 GvlvYsTCsvlveEneeviee 152
G vY + veEn e ie+
tr|I7MFA3|I7MFA3_TETTS 93 GESVYNEKRMSVEENGEKIEY 113
6778888899999*9999997 PP
== domain 2 score: 11.5 bits; conditional E-value: 9.8e-05
-TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHH.HHHHHHHTT--SEEEEES-CCCCHHHH CS
Methyltr_RsmB-F 7 qeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkr.vaenlkrLgvtntivleaDarkidkvl 75
+++ ++l l a G +h+a+++ ++g+v+Av+ +++ + v+ kr +v + +Dark++++
tr|I7MFA3|I7MFA3_TETTS 137 KPGSKVLYLGGASGTTVSHVADIVGPTGVVYAVEFSHRSGRDlVNMAKKRTNVV---PIIGDARKPQEYR 203
56678899999***********************97655444044455555554...6668999988764 PP
>> tr|Q24E29|Q24E29_TETTS UbiE/COQ5 family methyltransferase OS=Tetrahymena thermophila (strain SB210) OX=312017 GN=TTH
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.2 0.0 5.9e-05 0.16 3 67 .. 37 100 .. 35 122 .. 0.84
Alignments for each domain:
== domain 1 score: 12.2 bits; conditional E-value: 5.9e-05
HH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES- CS
Methyltr_RsmB-F 3 lLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaD 67
+L+ + + il++ a+ G hi++ k++++ vA+d++++ l+ + + l +L ++ +v +++
tr|Q24E29|Q24E29_TETTS 37 MLKIDKRDSILEVGAGTGFLYNHILNYKKQTAKYVATDISEKMLQIMSKRL-KLEYKENQVNNYE 100
7999999*********************************99988766554.5777777777665 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (200 nodes)
Target sequences: 26971 (16912921 residues searched)
Passed MSV filter: 2256 (0.0836454); expected 539.4 (0.02)
Passed bias filter: 581 (0.0215417); expected 539.4 (0.02)
Passed Vit filter: 52 (0.001928); expected 27.0 (0.001)
Passed Fwd filter: 10 (0.000370769); expected 0.3 (1e-05)
Initial search space (Z): 26971 [actual number of targets]
Domain search space (domZ): 10 [number of targets reported over threshold]
# CPU time: 0.33u 0.01s 00:00:00.34 Elapsed: 00:00:00.12
# Mc/sec: 28188.20
//
[ok]