# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/Methyltr_RsmB-F.hmm.txt
# target sequence database:        proteomes/Trichomonas_vaginalis.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       Methyltr_RsmB-F  [M=200]
Accession:   PF01189.16
Description: 16S rRNA methyltransferase RsmB/F
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    2.7e-66  224.5   0.0    4.5e-66  223.8   0.0    1.3  1  tr|A2F7I7|A2F7I7_TRIVA  NOL1/NOP2/sun family putative RNA met
    7.5e-40  138.2   0.0    1.8e-39  137.0   0.0    1.6  1  tr|A2FNB4|A2FNB4_TRIVA  NOL1/NOP2/sun family protein OS=Trich
    2.9e-39  136.2   0.0    2.5e-38  133.2   0.0    2.1  1  tr|A2EFA7|A2EFA7_TRIVA  NOL1/NOP2/sun family protein OS=Trich
    2.2e-38  133.4   0.1    1.1e-37  131.1   0.1    2.0  1  tr|A2FUH6|A2FUH6_TRIVA  NOL1/NOP2/sun family protein OS=Trich
     0.0056   17.8   0.0     0.0095   17.1   0.0    1.3  1  tr|A2DM16|A2DM16_TRIVA  MGC80481 protein, putative OS=Trichom
  ------ inclusion threshold ------
      0.011   16.8   0.0      0.031   15.4   0.0    1.8  1  tr|A2EDQ1|A2EDQ1_TRIVA  FtsJ-like methyltransferase family pr
      0.039   15.1   0.0      0.063   14.4   0.0    1.3  1  tr|A2EI72|A2EI72_TRIVA  Oxidoreductase, short chain dehydroge
       0.18   12.9   0.4        3.6    8.7   0.2    2.0  2  tr|A2GPU1|A2GPU1_TRIVA  Uncharacterized protein OS=Trichomona
       0.18   12.9   0.4         12    6.9   0.1    2.1  2  tr|A2HHA7|A2HHA7_TRIVA  Uncharacterized protein (Fragment) OS
       0.25   12.4   0.0        0.4   11.8   0.0    1.3  1  tr|A2F3X6|A2F3X6_TRIVA  FtsJ-like methyltransferase family pr
       0.43   11.6   0.0       0.81   10.7   0.0    1.4  1  tr|A2E9S9|A2E9S9_TRIVA  Fibrillarin, putative OS=Trichomonas 


Domain annotation for each sequence (and alignments):
>> tr|A2F7I7|A2F7I7_TRIVA  NOL1/NOP2/sun family putative RNA methylase containing protein OS=Trichomonas vaginalis OX=57
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  223.8   0.0   9.8e-70   4.5e-66       1     198 [.     215     423 ..     215     425 .. 0.97

  Alignments for each domain:
  == domain 1  score: 223.8 bits;  conditional E-value: 9.8e-70
                             HHHH---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE CS
         Methyltr_RsmB-F   1 allLapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDa 87 
                             +++L+pq++ + lD+caaPGgKTth+a+lmkn+g+++A+d+n++R++++++n++rLgvtntiv+++D+r +++v+gg  fD ++ Da
  tr|A2F7I7|A2F7I7_TRIVA 215 VMALNPQPGMRTLDMCAAPGGKTTHMAQLMKNQGVIIANDINRTRAQALIANIHRLGVTNTIVVNYDGRAFPTVMGG--FDAVMCDA 299
                             589*************************************************************************9..******** PP

                             --CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHE.EEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBSTTSTTS CS
         Methyltr_RsmB-F  88 PCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidll.kkgGvlvYsTCsvlveEneevieeaLkkredvelvetelsepkgl 173
                             PCsgtgvi+rdp+vk++++e+d++ l++ qke++  a d++  kgG l Y+TCs+lveEne+v+++++++r + ++++  l +   +
  tr|A2F7I7|A2F7I7_TRIVA 300 PCSGTGVISRDPSVKTSKSEQDLKVLTQNQKEIILHAYDSIsSKGGKLCYCTCSLLVEENEAVVDYLINNR-KCKVIPSGLDSDFDQ 385
                             ****************************************9789*************************99.999999999998888 PP

                             SECEEC.............T-EEE-TTTTS.-SEEEEE CS
         Methyltr_RsmB-F 174 klgeea.............gtlrllPhtenkdgffiak 198
                             +l e+                +r++Ph+ n+dgf+ a 
  tr|A2F7I7|A2F7I7_TRIVA 386 DLAEGIvnykghhfhpsvqLSRRVYPHRLNMDGFYFAL 423
                             8888888999********999**************996 PP

>> tr|A2FNB4|A2FNB4_TRIVA  NOL1/NOP2/sun family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_427320 PE=3 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  137.0   0.0   3.9e-43   1.8e-39       2     199 ..     148     389 ..     147     390 .. 0.88

  Alignments for each domain:
  == domain 1  score: 137.0 bits;  conditional E-value: 3.9e-43
                             HHH---TT-EEEECS-TT-HHHHHHHHHTTTTSE.......EEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EE CS
         Methyltr_RsmB-F   2 llLapqeeetilDlcaaPGgKTthiaelmknkgt.......vvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfD 81 
                             ++L+ q++ ++lD+caaPG+KTt + e+m +k++       vvA+++n++R + +a  l+rL  +++iv++ +++++++ +    fD
  tr|A2FNB4|A2FNB4_TRIVA 148 YFLDVQPDHFVLDMCAAPGSKTTQVIEMMLKKANgkplsgiVVANEVNAKRCHTLAGRLQRLDNRQIIVTSHEGQQFPELIK---FD 231
                             57999***********************8665433333333************************************99988...** PP

                             EEEEEE--CCGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-.TTEEEESSBS CS
         Methyltr_RsmB-F  82 riLlDaPCsgtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr.edvelvetel 167
                             ri  D+PCsg g++r+ pd+  + k ++ ++l+ lq+++l+ a+ llk gG  vYsTCs+++ E+e+vi ++Lk+   +v++ ++  
  tr|A2FNB4|A2FNB4_TRIVA 232 RIVCDVPCSGDGTLRKSPDAGPNWKLSEGQNLHVLQRAILTKALRLLKVGGRCVYSTCSLNPIEDEAVISSVLKECkGNVKILDV-- 316
                             ********************999999999********************************************986146666665.. PP

                             TTSTTSSECEEC..........................................T-EEE-TTTTS.-SEEEEEE CS
         Methyltr_RsmB-F 168 sepkglklgeea..........................................gtlrllPhtenkdgffiakl 199
                             s+ k ++l++++                                          + +r+lPh +++ gff+  l
  tr|A2FNB4|A2FNB4_TRIVA 317 SD-KFTDLKRTKglkswhvvtdekeymnpeevpeekkrrvpssmfpidvvegieNSMRFLPHLNDTGGFFVCVL 389
                             33.333333333346689999999***************************9999999************9866 PP

>> tr|A2EFA7|A2EFA7_TRIVA  NOL1/NOP2/sun family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_079770 PE=3 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  133.2   0.0   5.5e-42   2.5e-38       5     199 ..     140     379 ..     136     380 .. 0.88

  Alignments for each domain:
  == domain 1  score: 133.2 bits;  conditional E-value: 5.5e-42
                             ---TT-EEEECS-TT-HHHHHHHH.HTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE--C CS
         Methyltr_RsmB-F   5 apqeeetilDlcaaPGgKTthiae.lmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPCs 90 
                             +  +++ ilD+ca+PG+KT+ i e l + +g v+A+d++ +R   + + ++ +g  ++ v++  a++ +++    +fD+iL D+PCs
  tr|A2EFA7|A2EFA7_TRIVA 140 QVSKDDVILDMCASPGSKTSQIVEsLSQGNGLVIANDIDLKRCYTLLHQVQEIGTSKVLVTCNAAQYLPDFGI--KFDKILADVPCS 224
                             66789*****************98358999**************************88888888888777655..6*********** PP

                             CGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TT.EEEESSB.STTSTTSSE CS
         Methyltr_RsmB-F  91 gtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkred.velvete.lsepkglkl 175
                             g g++r+d +v  + k+++ ++++ lq+++l+  ++llk gG+lvYsTCs+++ E+e+vi ++L++ +  ve+v+t+ ++ + + + 
  tr|A2EFA7|A2EFA7_TRIVA 225 GDGTVRKDSNVASSWKPNNSTAMHGLQRAILKRGLELLKVGGTLVYSTCSMNPIEDEAVIGSVLSEIPGcVEIVDTSsIFPTLKRHS 311
                             *****************************************************************9985367777641334445555 PP

                             CEEC............................................T-EEE-TTTTS.-SEEEEEE CS
         Methyltr_RsmB-F 176 geea............................................gtlrllPhtenkdgffiakl 199
                             g ++                                            + +r++Ph en  gff++ l
  tr|A2EFA7|A2EFA7_TRIVA 312 GLTSwpvytvskenpnemlryelhsdvpdnlkgqvsktmfpsgveglnNCMRFFPHYENSGGFFVTVL 379
                             55558999999999999999999999999999999999999999999889999999999999999877 PP

>> tr|A2FUH6|A2FUH6_TRIVA  NOL1/NOP2/sun family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_380890 PE=3 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  131.1   0.1   2.4e-41   1.1e-37       4     199 ..     140     378 ..     137     379 .. 0.83

  Alignments for each domain:
  == domain 1  score: 131.1 bits;  conditional E-value: 2.4e-41
                             H---TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC--EEEEEEEE--C CS
         Methyltr_RsmB-F   4 LapqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlggelfDriLlDaPCs 90 
                             L+ +    +lD caaPG+KTt + e+++  g vvA+da+ +Rl+ +++ l+r+g   t v++ Da+k +++  +  fDr+L D+PC+
  tr|A2FUH6|A2FUH6_TRIVA 140 LDVHGSMGVLDTCAAPGSKTTQLIEMLDGDGYVVANDADVKRLHPMVHQLQRVGTYRTLVINFDAQKLPDFEEK--FDRVLCDVPCT 224
                             566666679***********************************************************998775..*********** PP

                             CGGGTTT-TTHHHH.-CCHHCCHHHHHHHHHHHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-.TTEEEESSBSTTSTTSSEC CS
         Methyltr_RsmB-F  91 gtgvirrdpdvklrrkekdiaqlaklqkellsaaidllkkgGvlvYsTCsvlveEneevieeaLkkr.edvelvetelsepkglklg 176
                             g g+ir++ +   + k +  ++l++ q+++l+  ++l+k gG  vYsTCs+++ E+e+v++++L ++ + ve+v+++ + p+ ++ +
  tr|A2FUH6|A2FUH6_TRIVA 225 GDGTIRKNIKCAETFKLNGGTSLHSTQRKILKRGLELTKVGGLCVYSTCSMNPIEDEAVVNSVLLETgDAVEIVDVSDKFPNLIRHK 311
                             *******99988888888899****************************************98765515677777643333322222 PP

                             EEC..............................................T-EEE-TTTTS.-SEEEEEE CS
         Methyltr_RsmB-F 177 eea..............................................gtlrllPhtenkdgffiakl 199
                                                                                ++++Ph ++  gff++ l
  tr|A2FUH6|A2FUH6_TRIVA 312 --GltnwpvfdaqmenefheykepsevpheriqyahpthfpqpqvpgleHCMHFFPHDQDSGGFFVTVL 378
                             ..1234777777778888888888888888888888888888888877767777888888888887665 PP

>> tr|A2DM16|A2DM16_TRIVA  MGC80481 protein, putative OS=Trichomonas vaginalis OX=5722 GN=TVAG_463050 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   17.1   0.0   2.1e-06    0.0095       6      71 ..     112     177 ..     108     188 .. 0.84

  Alignments for each domain:
  == domain 1  score: 17.1 bits;  conditional E-value: 2.1e-06
                             --TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--.SEEEEES-CCCC CS
         Methyltr_RsmB-F   6 pqeeetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvt.ntivleaDarki 71 
                             p++   i+D+c++ Gg Tt  a+ + + + v+ +d+++ R+   ++n k   v   t  +++D+ k+
  tr|A2DM16|A2DM16_TRIVA 112 PNDSSIIIDACCGVGGNTTAFAACI-QDSFVIGIDTSAIRIVCAKKNSKVCKVDqATDFVKGDVIKF 177
                             788899*****************95.567899*************9999888874567788887766 PP

>> tr|A2EDQ1|A2EDQ1_TRIVA  FtsJ-like methyltransferase family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_309050 PE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   15.4   0.0   6.8e-06     0.031       8      42 ..      45      79 ..      39     125 .. 0.85

  Alignments for each domain:
  == domain 1  score: 15.4 bits;  conditional E-value: 6.8e-06
                            TT-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESS CS
         Methyltr_RsmB-F  8 eeetilDlcaaPGgKTthiaelmknkgtvvAvdan 42
                            +    lDlcaaPGg     a+ m   ++++A+d  
  tr|A2EDQ1|A2EDQ1_TRIVA 45 DAHVCLDLCAAPGGWSQVAAKYMPVGAQIIAIDLA 79
                            55669***************************975 PP

>> tr|A2EI72|A2EI72_TRIVA  Oxidoreductase, short chain dehydrogenase/reductase family protein OS=Trichomonas vaginalis O
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   14.4   0.0   1.4e-05     0.063       9     143 ..      41     179 ..      35     184 .. 0.75

  Alignments for each domain:
  == domain 1  score: 14.4 bits;  conditional E-value: 1.4e-05
                             T-EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC..--EEE.EEEEE--CCG CS
         Methyltr_RsmB-F   9 eetilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkvlgg..elfDr.iLlDaPCsgt 92 
                              +++l   a+ G    + ++l k+  ++v + ++++R ++va+  + Lgv+    + aD  k+++v +   ++ D+ i +   C+g 
  tr|A2EI72|A2EI72_TRIVA  41 TNWVLITGASSGTGKHLALKLAKDGLNIVGTGRDTTRFNSVAQQCRSLGVQ-FETVIADFAKPESVNTVvkAMEDKdIGVYFLCAGY 126
                             55666666666666566678999999*************************.66677888888766543336777757799999999 PP

                             GGTTT-TTHHHH.-CCH.HCCHHHHHHHHHHHHHHHE..EEEEEEEEEES---C CS
         Methyltr_RsmB-F  93 gvirrdpdvklrrkekd.iaqlaklqkellsaaidll..kkgGvlvYsTCsvlv 143
                             g+++   +  ++++  d i +++  q  l + +i++   +k  +lvY   s++ 
  tr|A2EI72|A2EI72_TRIVA 127 GMVDDFFNF-TEKQLIDfIESMVISQTILYKYIIEKSkkRKSETLVYGIASLAA 179
                             999999999.55555551555666666677788888755567899998888765 PP

>> tr|A2GPU1|A2GPU1_TRIVA  Uncharacterized protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_510860 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    2.8   0.0     0.049   2.3e+02     122     167 ..      22      67 ..      11      82 .. 0.78
   2 ?    8.7   0.2   0.00078       3.6     138     165 ..      85     112 ..      83     146 .. 0.69

  Alignments for each domain:
  == domain 1  score: 2.8 bits;  conditional E-value: 0.049
                             HHHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBS CS
         Methyltr_RsmB-F 122 saaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetel 167
                             + +++++ k G  v   C  + + n + +++a  k  + +lv+++ 
  tr|A2GPU1|A2GPU1_TRIVA  22 HKILHSVNKKGEFVLKFCFWEYDKNHKTLQRAVLKFVNDRLVDRDD 67 
                             5678899999*******************99988888888877643 PP

  == domain 2  score: 8.7 bits;  conditional E-value: 0.00078
                             ES---CTCTHHHHHHHHHH-TTEEEESS CS
         Methyltr_RsmB-F 138 TCsvlveEneevieeaLkkredvelvet 165
                             TC vl +E+e+ i+e+Lk++e  +  + 
  tr|A2GPU1|A2GPU1_TRIVA  85 TCGVLEDETENRIDELLKDKELLHKYSC 112
                             9*****************9975544333 PP

>> tr|A2HHA7|A2HHA7_TRIVA  Uncharacterized protein (Fragment) OS=Trichomonas vaginalis OX=5722 GN=TVAG_179150 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?    4.6   0.0     0.014        63     123     168 ..      12      57 ..       2      71 .. 0.80
   2 ?    6.9   0.1    0.0027        12     138     162 ..      74      98 ..      72     135 .. 0.72

  Alignments for each domain:
  == domain 1  score: 4.6 bits;  conditional E-value: 0.014
                             HHHHHEEEEEEEEEEES---CTCTHHHHHHHHHH-TTEEEESSBST CS
         Methyltr_RsmB-F 123 aaidllkkgGvlvYsTCsvlveEneevieeaLkkredvelvetels 168
                              +++++ k G lv   C  + + n + +++a  k  + +lv+++  
  tr|A2HHA7|A2HHA7_TRIVA  12 KILHSVNKKGELVLKFCFWEYDKNHKTLQRAVLKFVNDRLVDRDDA 57 
                             5678999**********************99888888888876433 PP

  == domain 2  score: 6.9 bits;  conditional E-value: 0.0027
                             ES---CTCTHHHHHHHHHH-TTEEE CS
         Methyltr_RsmB-F 138 TCsvlveEneevieeaLkkredvel 162
                             TC+vl +E e+ i+e+Lk++e  + 
  tr|A2HHA7|A2HHA7_TRIVA  74 TCAVLEDEIENRIDELLKDKELLHK 98 
                             9*****************9975443 PP

>> tr|A2F3X6|A2F3X6_TRIVA  FtsJ-like methyltransferase family protein OS=Trichomonas vaginalis OX=5722 GN=TVAG_290980 PE
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   11.8   0.0   8.7e-05       0.4       7      77 ..      39     115 ..      35     130 .. 0.68

  Alignments for each domain:
  == domain 1  score: 11.8 bits;  conditional E-value: 8.7e-05
                             -TT-EEEECS-TT-HHHHHHHHHTTTT..SEEEEEESSC....CCHHHHHHHHHHTT--SEEEEES-CCCCHHHHCC CS
         Methyltr_RsmB-F   7 qeeetilDlcaaPGgKTthiaelmknk..gtvvAvdank....eRlkrvaenlkrLgvtntivleaDarkidkvlgg 77 
                             ++  +++Dlc+aPG+     a+lm ++   +++ +d  +      + ++  +++ +   +  ++  D++k d vl++
  tr|A2F3X6|A2F3X6_TRIVA  39 KDSTRVVDLCSAPGSWSQVCAKLMPETdaRKIISIDLRRivpiDGVTELRGDITDVKTAENVISLLDGNKADAVLAD 115
                             67788******************987611567777765421113345566666666666666777777777666665 PP

>> tr|A2E9S9|A2E9S9_TRIVA  Fibrillarin, putative OS=Trichomonas vaginalis OX=5722 GN=TVAG_282140 PE=3 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 ?   10.7   0.0   0.00018      0.81      11      74 ..     163     224 ..     158     239 .. 0.75

  Alignments for each domain:
  == domain 1  score: 10.7 bits;  conditional E-value: 0.00018
                             EEEECS-TT-HHHHHHHHHTTTTSEEEEEESSCCCHHHHHHHHHHTT--SEEEEES-CCCCHHH CS
         Methyltr_RsmB-F  11 tilDlcaaPGgKTthiaelmknkgtvvAvdankeRlkrvaenlkrLgvtntivleaDarkidkv 74 
                             ++l l aa G   +h+++++ ++g+v+Av+ ++ R+ r    l +L  + +  +  Dar+++k+
  tr|A2E9S9|A2E9S9_TRIVA 163 KVLYLGAASGTTVSHVSDIVGPTGRVYAVEFSH-RVARDLVSLAKLRPN-IVPIINDARYPNKY 224
                             688899************************975.555555556666665.44455577777665 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (200 nodes)
Target sequences:                        50190  (17055200 residues searched)
Passed MSV filter:                      2724  (0.0542738); expected 1003.8 (0.02)
Passed bias filter:                     1912  (0.0380952); expected 1003.8 (0.02)
Passed Vit filter:                      1024  (0.0204025); expected 50.2 (0.001)
Passed Fwd filter:                        11  (0.000219167); expected 0.5 (1e-05)
Initial search space (Z):              50190  [actual number of targets]
Domain search space  (domZ):              11  [number of targets reported over threshold]
# CPU time: 0.40u 0.01s 00:00:00.41 Elapsed: 00:00:00.14
# Mc/sec: 24364.57
//
[ok]