# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_10.hmm.txt
# target sequence database: proteomes/Amphimedon_queenslandica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_10 [M=299]
Accession: PF05971.11
Description: Protein of unknown function (DUF890)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
8.9e-68 230.1 0.0 1.3e-67 229.6 0.0 1.2 1 tr|A0A1X7U5N0|A0A1X7U5N0_AMPQE U6 small nuclear RNA (adenine-(4
Domain annotation for each sequence (and alignments):
>> tr|A0A1X7U5N0|A0A1X7U5N0_AMPQE U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase OS=Amphimedon queenslandic
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 229.6 0.0 2.9e-72 1.3e-67 7 297 .. 1 286 [. 1 288 [. 0.91
Alignments for each domain:
== domain 1 score: 229.6 bits; conditional E-value: 2.9e-72
XXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXX..XX...XXXS-TTSHHHHHHHHHHHHHHHH----.---TTS----H CS
Methyltransf_10 7 lhprnrhkdky.dfaalikvvPelkqfvilnp..kG...rvsidfadPlavkalnkallrefygvsewdiPdgfliPpv 79
+hprn ++++ dfa+ +k++P l+ ++i++ kG +++idf ++++ l+ a l++++g+s d+P g+l+P++
tr|A0A1X7U5N0|A0A1X7U5N0_AMPQE 1 MHPRNIFNKRKpDFAEYAKTHPALEPHLIKKAtsKGegfQYTIDFSSTQSLHELAAATLQHEFGLSV-DLPSGHLVPSI 78
8*****987666****************9865125544568*************************9.*********** PP
HHHHHHHHHHHHHHT--TCGCS---EEEEES-TTTTHHHHHHHH.HH--EEEEEES-HHHHHHHHHHHHHT.T-TTTEE CS
Methyltransf_10 80 PgradyihyvadllgkadsdisaqvraldiGvGanCiyPllGvt.eyGWrfvgsevddvslasakaivesnsklsdaik 157
P r++yih+v+dl+gk+++ i ++diG G Ci+Pll t ++ W+f+++ev++ + ++a +++ n +l+ +i
tr|A0A1X7U5N0|A0A1X7U5N0_AMPQE 79 PQRLNYIHWVEDLVGKESDVI-----GIDIGCGPLCIFPLLSCTiNNNWKFIATEVQPDCTTYALENIKRN-NLKPKIT 151
****************99988.....9**************9883578***********************.******* PP
EEE--ST...-SSTTTSTT--S-EEEEEE-----SS------------...---.....---------TTTTHHHHTHH CS
Methyltransf_10 158 lrkqkek...kaifdglieenerydvtlCnPPfhaslaeakagserklknlgkanktralpslnfgGqkaelyceGGev 233
+ ++ k ++d+ + ++++++CnPPf+ + +e k+g++r ++ p+ ++G++ e ++ GGev
tr|A0A1X7U5N0|A0A1X7U5N0_AMPQE 152 VIQVAPDvflKGVVDTASYDHTQFTFCMCNPPFYKDGDELKGGASRTG---HRP-----VPKTLNTGNEIETMTSGGEV 222
9988654111334444444566************************98...455.....789999************** PP
HHHHHHHHHHHHHGGGEEEEEEEESSGGGHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEEES CS
Methyltransf_10 234 afikklieeskqlakqvlWfttlvskkenlaplkeelkklGaskvtvvelaqGqklsrfiaWsf 297
+f++++++es ++ +++ W+t++++kk++la++k+ lk+l ++ + + ++qG++ ++ +aWs+
tr|A0A1X7U5N0|A0A1X7U5N0_AMPQE 223 EFVRNIVKESMSIGTRIKWYTSMLGKKDSLAKIKNFLKELKVPVILDTTFVQGRTHRWGVAWSY 286
***************************************************************9 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (299 nodes)
Target sequences: 43435 (14716620 residues searched)
Passed MSV filter: 949 (0.0218487); expected 868.7 (0.02)
Passed bias filter: 747 (0.0171981); expected 868.7 (0.02)
Passed Vit filter: 37 (0.000851848); expected 43.4 (0.001)
Passed Fwd filter: 1 (2.30229e-05); expected 0.4 (1e-05)
Initial search space (Z): 43435 [actual number of targets]
Domain search space (domZ): 1 [number of targets reported over threshold]
# CPU time: 0.30u 0.01s 00:00:00.31 Elapsed: 00:00:00.11
# Mc/sec: 40002.45
//
[ok]