# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/Methyltransf_10.hmm.txt
# target sequence database:        proteomes/Monodelphis_domestica.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       Methyltransf_10  [M=299]
Accession:   PF05971.11
Description: Protein of unknown function (DUF890)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
   2.3e-133  444.4   0.0   3.4e-133  443.9   0.0    1.2  1  tr|F7FJY5|F7FJY5_MONDO  U6 small nuclear RNA (adenine-(43)-N(


Domain annotation for each sequence (and alignments):
>> tr|F7FJY5|F7FJY5_MONDO  U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase OS=Monodelphis domestica OX=13616 
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  443.9   0.0  1.6e-137  3.4e-133       1     299 []       1     291 [.       1     291 [. 0.99

  Alignments for each domain:
  == domain 1  score: 443.9 bits;  conditional E-value: 1.6e-137
                             XXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXS-TTSHHHHHHHHHHHHHHHH----.---TTS----HHHHHHHH CS
         Methyltransf_10   1 aalksglhprnrhkdky.dfaalikvvPelkqfvilnpkGrvsidfadPlavkalnkallrefygvsewdiPdgfliPpvPgradyi 86 
                             +al++++h+rnr+kdk+ dfa+l++++P++kq+v++n++Grvs++f+dP+av+al+++ll+e++g+s+ diP ++liP+vP+r++yi
  tr|F7FJY5|F7FJY5_MONDO   1 MALNKSMHARNRYKDKPpDFAYLASKYPDFKQHVQINLTGRVSLNFKDPEAVRALTCTLLKEDFGLSI-DIPLERLIPTVPLRLNYI 86 
                             6889************99**************************************************.****************** PP

                             HHHHHHHT--TCGCS---EEEEES-TTTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT.T-TTTEEEEE--ST-SSTTTSTT CS
         Methyltransf_10  87 hyvadllgkadsdisaqvraldiGvGanCiyPllGvteyGWrfvgsevddvslasakaivesnsklsdaiklrkqkekkaifdglie 173
                             h+v+dl+g  d+  sa +r++diG+Ga+CiyPllG+t++GW+f+++evdd+++++ak++ve+n +lsd+ik++k+++k+ ++d+l+e
  tr|F7FJY5|F7FJY5_MONDO  87 HWVEDLIGPWDPARSALRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIKVVKVPQKTLLMDALKE 172
                             ***************************************************************.*********************** PP

                             --S.-EEEEEE-----SS------------...---.....---------TTTTHHHHTHHHHHHHHHHHHHHHGGGEEEEEEEESS CS
         Methyltransf_10 174 ene.rydvtlCnPPfhaslaeakagserklknlgkanktralpslnfgGqkaelyceGGevafikklieeskqlakqvlWfttlvsk 259
                             e+e +yd+++CnPPf+a+++eak++++r++   +++     +ps++++G+++e+++eGGe++f+k++i++s ql+k+++W++++++k
  tr|F7FJY5|F7FJY5_MONDO 173 ESEiIYDFCMCNPPFFANQLEAKGVNSRNP---RRP-----PPSSVNTGGITEIMAEGGELEFVKRIIHDSLQLKKRLRWYSCMLGK 251
                             ***99*************************...776.....899******************************************* PP

                             GGGHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEEES-- CS
         Methyltransf_10 260 kenlaplkeelkklGaskvtvvelaqGqklsrfiaWsfld 299
                             k++laplkeel+++G++kvt +e++qG+++++++aWsf+d
  tr|F7FJY5|F7FJY5_MONDO 252 KCSLAPLKEELRIQGVPKVTHTEFCQGRTMRWALAWSFYD 291
                             **************************************97 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (299 nodes)
Target sequences:                        21272  (11266248 residues searched)
Passed MSV filter:                       466  (0.0219067); expected 425.4 (0.02)
Passed bias filter:                      368  (0.0172997); expected 425.4 (0.02)
Passed Vit filter:                        29  (0.00136329); expected 21.3 (0.001)
Passed Fwd filter:                         1  (4.70102e-05); expected 0.2 (1e-05)
Initial search space (Z):              21272  [actual number of targets]
Domain search space  (domZ):               1  [number of targets reported over threshold]
# CPU time: 0.22u 0.01s 00:00:00.23 Elapsed: 00:00:00.08
# Mc/sec: 42107.60
//
[ok]