# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_10.hmm.txt
# target sequence database: proteomes/Pan_troglodytes.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_10 [M=299]
Accession: PF05971.11
Description: Protein of unknown function (DUF890)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
6.8e-137 456.1 0.0 8.9e-137 455.7 0.0 1.1 1 tr|A0A2I3RSR0|A0A2I3RSR0_PANTR U6 small nuclear RNA (adenine-(4
------ inclusion threshold ------
0.026 14.2 0.0 0.043 13.5 0.0 1.2 1 tr|A0A2I3SII7|A0A2I3SII7_PANTR SHC SH2-domain binding protein 1
0.034 13.8 0.0 0.075 12.7 0.0 1.5 1 tr|A0A2I3SZZ8|A0A2I3SZZ8_PANTR Transcription factor OS=Pan trog
Domain annotation for each sequence (and alignments):
>> tr|A0A2I3RSR0|A0A2I3RSR0_PANTR U6 small nuclear RNA (adenine-(43)-N(6))-methyltransferase OS=Pan troglodytes OX=9598
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 455.7 0.0 1.2e-140 8.9e-137 1 299 [] 1 291 [. 1 291 [. 0.99
Alignments for each domain:
== domain 1 score: 455.7 bits; conditional E-value: 1.2e-140
XXXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXS-TTSHHHHHHHHHHHHHHHH----.---TTS---- CS
Methyltransf_10 1 aalksglhprnrhkdky.dfaalikvvPelkqfvilnpkGrvsidfadPlavkalnkallrefygvsewdiPdgfliPp 78
+al++++h+rnr+kdk+ dfa+l++++P++kq+v++n++Grvs++f+dP+av+al+++llre++g+s+ diP ++liP+
tr|A0A2I3RSR0|A0A2I3RSR0_PANTR 1 MALSKSMHARNRYKDKPpDFAYLASKYPDFKQHVQINLNGRVSLNFKDPEAVRALTCTLLREDFGLSI-DIPLERLIPT 78
6899************99**************************************************.********** PP
HHHHHHHHHHHHHHHT--TCGCS---EEEEES-TTTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT.T-TTTEE CS
Methyltransf_10 79 vPgradyihyvadllgkadsdisaqvraldiGvGanCiyPllGvteyGWrfvgsevddvslasakaivesnsklsdaik 157
vP+r++yih+v+dl+g++dsd+s+ +r++diG+Ga+CiyPllG+t++GW+f+++evdd+++++ak++ve+n +lsd+ik
tr|A0A2I3RSR0|A0A2I3RSR0_PANTR 79 VPLRLNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQN-NLSDLIK 156
***********************************************************************.******* PP
EEE--ST-SSTTTSTT--S.-EEEEEE-----SS------------...---.....---------TTTTHHHHTHHHH CS
Methyltransf_10 158 lrkqkekkaifdglieene.rydvtlCnPPfhaslaeakagserklknlgkanktralpslnfgGqkaelyceGGevaf 235
++k+++k+ ++d+l+ee+e +yd+++CnPPf+a+++eak++++r++ +++ +ps++++G+++e+++eGGe++f
tr|A0A2I3RSR0|A0A2I3RSR0_PANTR 157 VVKVPQKTLLMDALKEESEiIYDFCMCNPPFFANQLEAKGVNSRNP---RRP-----PPSSVNTGGITEIMAEGGELEF 227
*******************99*************************...776.....899******************* PP
HHHHHHHHHHHGGGEEEEEEEESSGGGHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEEES-- CS
Methyltransf_10 236 ikklieeskqlakqvlWfttlvskkenlaplkeelkklGaskvtvvelaqGqklsrfiaWsfld 299
+k++i++s ql+k+++W++++++kk++laplkeel+++G++kvt++e++qG+++++++aWsf+d
tr|A0A2I3RSR0|A0A2I3RSR0_PANTR 228 VKRIIHDSLQLKKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYTEFCQGRTMRWALAWSFYD 291
**************************************************************97 PP
>> tr|A0A2I3SII7|A0A2I3SII7_PANTR SHC SH2-domain binding protein 1 OS=Pan troglodytes OX=9598 GN=SHCBP1 PE=2 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 13.5 0.0 5.6e-06 0.043 166 285 .. 530 648 .. 517 654 .. 0.80
Alignments for each domain:
== domain 1 score: 13.5 bits; conditional E-value: 5.6e-06
SSTTTSTT--S-EEEEEE-----SS---.---------...---.....---------TTTTH.HHHTHHHHHHHHHHH CS
Methyltransf_10 166 aifdglieenerydvtlCnPPfhaslae.akagserklknlgkanktralpslnfgGqkaely.ceGGevafikkliee 242
+++ +i++ne y v+l P +++l+e a+ g+e ++ l k +t+ +p + + +el+ c G +++ +++ +
tr|A0A2I3SII7|A0A2I3SII7_PANTR 530 SMVNNIIHNNEGYGVVLVKPTIFSDLQEnAEDGTEENK-AL-KI-QTSGEPDVAERVDLEELIeCATGKMELCARI-DP 604
6899****************988776552777777766.78.44.78888999998888887559******99995.78 PP
HHHHGGGEEEEEEEESSGGGHHHHH.HHHHHTT-SEEEEEEEEE CS
Methyltransf_10 243 skqlakqvlWfttlvskkenlaplk.eelkklGaskvtvvelaq 285
s+q++ + + l++ +++ ++k ++l +lG+++ ++q
tr|A0A2I3SII7|A0A2I3SII7_PANTR 605 SEQVEGNCEIVNELIAASTQKGQIKkKRLSELGITQADDNLMSQ 648
99999999999999998888877752579999988776666655 PP
>> tr|A0A2I3SZZ8|A0A2I3SZZ8_PANTR Transcription factor OS=Pan troglodytes OX=9598 GN=TFDP1 PE=3 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 12.7 0.0 9.8e-06 0.075 18 77 .. 4 66 .. 2 76 .. 0.89
Alignments for each domain:
== domain 1 score: 12.7 bits; conditional E-value: 9.8e-06
XXXXXXXXXXXXXXXXXXXX...XXXXXS-TTSHHHHHHHHHHHHHHHH----.---TTS--- CS
Methyltransf_10 18 dfaalikvvPelkqfvilnp...kGrvsidfadPlavkalnkallrefygvsewdiPdgfliP 77
d+a li+ + elk f+ n+ kG vs+ P +v l k ll + +g s+ +i ++ +i
tr|A0A2I3SZZ8|A0A2I3SZZ8_PANTR 4 DLAGLIEANGELKVFIDQNLspgKGVVSLVAVHPSTVNPLGKQLLPKTFGQSNVNIAQQVVIG 66
99***************99744568999999*************************9988774 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (299 nodes)
Target sequences: 23008 (11942255 residues searched)
Passed MSV filter: 460 (0.019993); expected 460.2 (0.02)
Passed bias filter: 375 (0.0162987); expected 460.2 (0.02)
Passed Vit filter: 26 (0.00113004); expected 23.0 (0.001)
Passed Fwd filter: 3 (0.000130389); expected 0.2 (1e-05)
Initial search space (Z): 23008 [actual number of targets]
Domain search space (domZ): 3 [number of targets reported over threshold]
# CPU time: 0.23u 0.01s 00:00:00.24 Elapsed: 00:00:00.08
# Mc/sec: 44634.18
//
[ok]