# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file:                  pfam_list/Methyltransf_10.hmm.txt
# target sequence database:        proteomes/Petromyzon_marinus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query:       Methyltransf_10  [M=299]
Accession:   PF05971.11
Description: Protein of unknown function (DUF890)
Scores for complete sequences (score includes all domains):
   --- full sequence ---   --- best 1 domain ---    -#dom-
    E-value  score  bias    E-value  score  bias    exp  N  Sequence               Description
    ------- ------ -----    ------- ------ -----   ---- --  --------               -----------
    1.3e-83  280.3   0.0    1.5e-83  280.2   0.0    1.0  1  tr|S4RS03|S4RS03_PETMA  Methyltransferase like 16 OS=Petromyz
    9.7e-15   54.3   0.0    1.4e-14   53.8   0.0    1.2  1  tr|S4RH34|S4RH34_PETMA  Uncharacterized protein OS=Petromyzon


Domain annotation for each sequence (and alignments):
>> tr|S4RS03|S4RS03_PETMA  Methyltransferase like 16 OS=Petromyzon marinus OX=7757 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !  280.2   0.0   2.2e-87   1.5e-83      27     255 ..       2     222 .]       1     222 [] 0.97

  Alignments for each domain:
  == domain 1  score: 280.2 bits;  conditional E-value: 2.2e-87
                             XXXXXXXXXXXXXXXXS-TTSHHHHHHHHHHHHHHHH----.---TTS----HHHHHHHHHHHHHHHT--TCGCS-.--EEEEES-T CS
         Methyltransf_10  27 PelkqfvilnpkGrvsidfadPlavkalnkallrefygvsewdiPdgfliPpvPgradyihyvadllgkadsdisa.qvraldiGvG 112
                             Pe+k++v+ +++Grv ++f++P+av+al++all+e++g+s+ +iP ++liP++P+r++yih+v+dllg++ s  ++ +v+++diG+G
  tr|S4RS03|S4RS03_PETMA   2 PEFKKHVQTDLSGRVRLNFKEPEAVRALTCALLQEDFGLSI-EIPLERLIPTLPLRLNYIHWVEDLLGSSLSRDPEkSVHGIDIGTG 87 
                             9****************************************.****************************999877699******** PP

                             TTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT.T-TTTEEEEE--ST-SSTTTSTT--S.-EEEEEE-----SS-------- CS
         Methyltransf_10 113 anCiyPllGvteyGWrfvgsevddvslasakaivesnsklsdaiklrkqkekkaifdglieene.rydvtlCnPPfhaslaeakags 198
                             a+CiyPllG+t +GW+f+++evd+v++++a+++v+ n  l++++++ k+++k+ ++++l e  e  yd+++CnPPf+a+++ea +++
  tr|S4RS03|S4RS03_PETMA  88 ASCIYPLLGATMNGWHFLATEVDNVCFTYATQNVARN-GLQGLVRVMKVPQKTLLVEALNEDPElAYDFCVCNPPFFANQQEAYGVN 173
                             *************************************.**************************9********************** PP

                             ----...---.....---------TTTTHHHHTHHHHHHHHHHHHHHHGGGEEEEEE CS
         Methyltransf_10 199 erklknlgkanktralpslnfgGqkaelyceGGevafikklieeskqlakqvlWftt 255
                             +r+     ++     +ps++++G+ +e+++eGGe++f++k+i++s ql+k++++ ++
  tr|S4RS03|S4RS03_PETMA 174 SRNS---HRP-----PPSSVNTGGATEIMAEGGELEFVRKIIHDSLQLQKRIRYTSC 222
                             **99...565.....899**********************************98765 PP

>> tr|S4RH34|S4RH34_PETMA  Uncharacterized protein OS=Petromyzon marinus OX=7757 PE=4 SV=1
   #    score  bias  c-Evalue  i-Evalue hmmfrom  hmm to    alifrom  ali to    envfrom  env to     acc
 ---   ------ ----- --------- --------- ------- -------    ------- -------    ------- -------    ----
   1 !   53.8   0.0     2e-18   1.4e-14     251     298 ..       1      48 [.       1      49 [. 0.98

  Alignments for each domain:
  == domain 1  score: 53.8 bits;  conditional E-value: 2e-18
                             EEEEEEESSGGGHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEEES- CS
         Methyltransf_10 251 lWfttlvskkenlaplkeelkklGaskvtvvelaqGqklsrfiaWsfl 298
                             +W+t++++kk++laplkeel++ G+++ t++ ++qG+++++++aWsf 
  tr|S4RH34|S4RH34_PETMA   1 RWYTCMLGKKCSLAPLKEELRRCGVPRTTTTTFCQGRTMRWALAWSFH 48 
                             6*********************************************96 PP



Internal pipeline statistics summary:
-------------------------------------
Query model(s):                              1  (299 nodes)
Target sequences:                        13539  (5048892 residues searched)
Passed MSV filter:                       253  (0.0186868); expected 270.8 (0.02)
Passed bias filter:                      217  (0.0160278); expected 270.8 (0.02)
Passed Vit filter:                         9  (0.000664746); expected 13.5 (0.001)
Passed Fwd filter:                         2  (0.000147721); expected 0.1 (1e-05)
Initial search space (Z):              13539  [actual number of targets]
Domain search space  (domZ):               2  [number of targets reported over threshold]
# CPU time: 0.09u 0.00s 00:00:00.09 Elapsed: 00:00:00.05
# Mc/sec: 30192.37
//
[ok]