# hmmsearch :: search profile(s) against a sequence database
# HMMER 3.1b2 (February 2015); http://hmmer.org/
# Copyright (C) 2015 Howard Hughes Medical Institute.
# Freely distributed under the GNU General Public License (GPLv3).
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# query HMM file: pfam_list/Methyltransf_10.hmm.txt
# target sequence database: proteomes/Strongylocentrotus_purpuratus.fasta
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query: Methyltransf_10 [M=299]
Accession: PF05971.11
Description: Protein of unknown function (DUF890)
Scores for complete sequences (score includes all domains):
--- full sequence --- --- best 1 domain --- -#dom-
E-value score bias E-value score bias exp N Sequence Description
------- ------ ----- ------- ------ ----- ---- -- -------- -----------
2e-89 300.5 0.0 2.8e-89 300.1 0.0 1.2 1 tr|W4YFA7|W4YFA7_STRPU Uncharacterized protein OS=Strongyloc
------ inclusion threshold ------
1.7 8.5 28.5 8.2 6.3 1.4 6.7 7 tr|W4Y6M0|W4Y6M0_STRPU Uncharacterized protein OS=Strongyloc
Domain annotation for each sequence (and alignments):
>> tr|W4YFA7|W4YFA7_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ! 300.1 0.0 2e-93 2.8e-89 2 298 .. 2 292 .. 1 293 [. 0.94
Alignments for each domain:
== domain 1 score: 300.1 bits; conditional E-value: 2e-93
XXXXXXXXXXXXXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXS-TTSHHHHHHHHHHHHHHHH----.---TTS----HHHHHHHHH CS
Methyltransf_10 2 alksglhprnrhkdky.dfaalikvvPelkqfvilnpkGrvsidfadPlavkalnkallrefygvsewdiPdgfliPpvPgradyih 87
a ++ +hprnr+kd+ +f +l++++Pe+ ++vi n +G+ ++df d ++++ l+++ll+e++g++ ++P ++liP++ +r++yih
tr|W4YFA7|W4YFA7_STRPU 2 AFNKFMHPRNRYKDNKpNFDELAEKYPEFARHVIRNQAGKATLDFHDSESLRSLTCTLLKEDFGLEV-ELPLDRLIPTLSLRLNYIH 87
67889********8655************************************************99.******************* PP
HHHHHHT--TCGCS---EEEEES-TTTTHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHHT.T-TTTEEEEE--ST-SSTTTSTT- CS
Methyltransf_10 88 yvadllgkadsdisaqvraldiGvGanCiyPllGvteyGWrfvgsevddvslasakaivesnsklsdaiklrkqkekkaifdgliee 174
+++dll+++ +++ ++v ++d G Ga+CiyPllG++ +GW+f++sevd ++ +ak ++ n l+d+i ++ e ++ ++l +
tr|W4YFA7|W4YFA7_STRPU 88 WIEDLLASTGHGK-ETVWGIDTGCGASCIYPLLGAQMNGWNFLASEVDALAIYYAKENITRN-GLDDKITVVETLEDSMFEQALNSA 172
*******999888.7899********************************************.**********99999888888876 PP
-S...-EEEEEE-----SS------------...---.....---------TTTTHHHHTHHHHHHHHHHHHHHHGGGEEEEEEEES CS
Methyltransf_10 175 ne...rydvtlCnPPfhaslaeakagserklknlgkanktralpslnfgGqkaelyceGGevafikklieeskqlakqvlWfttlvs 258
y +t+CnPPf+ + +ea++ + + ++ +p+++ + + e+++eGGev+f++++iees l++qv+W+t++++
tr|W4YFA7|W4YFA7_STRPU 173 PSrqpLYHFTMCNPPFFGNSLEAQGIMTSRS--MSRP-----EPKSVSTAAELEMISEGGEVEFVRRMIEESLRLRNQVVWYTSMLG 252
542237******************9865544..5666.....79999**************************************** PP
SGGGHHHHHHHHHHTT-SEEEEEEEEETTEEEEEEEEES- CS
Methyltransf_10 259 kkenlaplkeelkklGaskvtvvelaqGqklsrfiaWsfl 298
kk++la ++eel+k + +vt +e++qG+++++ iaW+f
tr|W4YFA7|W4YFA7_STRPU 253 KKSSLALVREELRKHKIRNVTHTEFCQGRTMRWGIAWTFK 292
***************************************7 PP
>> tr|W4Y6M0|W4Y6M0_STRPU Uncharacterized protein OS=Strongylocentrotus purpuratus OX=7668 PE=4 SV=1
# score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc
--- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ----
1 ? 4.2 0.3 0.0026 37 161 202 .. 12 56 .. 4 69 .. 0.73
2 ? 4.1 0.2 0.0027 38 184 218 .. 71 106 .. 68 114 .. 0.71
3 ? 3.1 0.1 0.0056 80 184 203 .. 104 123 .. 99 136 .. 0.76
4 ? 3.1 2.1 0.0053 76 182 212 .. 135 166 .. 111 199 .. 0.67
5 ? 6.3 1.4 0.00058 8.2 160 225 .. 197 266 .. 174 270 .. 0.71
6 ? 4.2 0.5 0.0026 37 184 225 .. 257 299 .. 252 313 .. 0.76
7 ? 1.0 0.3 0.024 3.4e+02 166 205 .. 302 344 .. 295 367 .. 0.65
Alignments for each domain:
== domain 1 score: 4.2 bits; conditional E-value: 0.0026
--ST-SSTTTSTT--S.-EEEE..EE-----SS------------ CS
Methyltransf_10 161 qkekkaifdglieene.rydvt..lCnPPfhaslaeakagserkl 202
q+e ++i + +e++e r + PPf +s++ea++ ++r +
tr|W4Y6M0|W4Y6M0_STRPU 12 QEEANKIQQRAKERSEgRVNSKtpQGSPPFTDSQEEANEIQQRAK 56
556667777777777765443301568*************99976 PP
== domain 2 score: 4.1 bits; conditional E-value: 0.0027
-----SS----------.--...---.....----- CS
Methyltransf_10 184 nPPfhaslaeakagser.klknlgkanktralpsln 218
PPf +s++ea++ ++r k + g++n ++ + s
tr|W4Y6M0|W4Y6M0_STRPU 71 SPPFTDSQEEANEIQQRaKERSEGRVNSKTPQGSPP 106
6*************9993445667776655555555 PP
== domain 3 score: 3.1 bits; conditional E-value: 0.0056
-----SS------------. CS
Methyltransf_10 184 nPPfhaslaeakagserklk 203
PPf +s++ea++ ++r ++
tr|W4Y6M0|W4Y6M0_STRPU 104 SPPFTDSQEEANEIQQRAKE 123
6*************999653 PP
== domain 4 score: 3.1 bits; conditional E-value: 0.0053
EE-----SS------------....---.... CS
Methyltransf_10 182 lCnPPfhaslaeakagserkl.knlgkanktr 212
PPf +s++ea + ++r + + g++n ++
tr|W4Y6M0|W4Y6M0_STRPU 135 QGSPPFTDSQEEADNIQQRAKeRSEGRVNSKT 166
457************99995515556665533 PP
== domain 5 score: 6.3 bits; conditional E-value: 0.00058
E--ST-SSTTTSTT--S.-EEEE..EE-----SS----------.--...---.....---------TTT CS
Methyltransf_10 160 kqkekkaifdglieene.rydvt..lCnPPfhaslaeakagser.klknlgkanktralpslnfgGqkae 225
q+e ++i + +e++e r + PPf +s++ea++ ++r k + g++n ++ + s f+ ++e
tr|W4Y6M0|W4Y6M0_STRPU 197 SQEEANNIQQRAKERSEgRVNSKtpQGSPPFTDSQEEANNIQQRaKERSEGRVNSKTPQGSPPFTDSQEE 266
5667777777778888775544311568*************99944567788877777677777766666 PP
== domain 6 score: 4.2 bits; conditional E-value: 0.0026
-----SS----------.--...---.....---------TTT CS
Methyltransf_10 184 nPPfhaslaeakagser.klknlgkanktralpslnfgGqkae 225
PPf +s++ea + ++r k + g++n ++ + s f+ ++e
tr|W4Y6M0|W4Y6M0_STRPU 257 SPPFTDSQEEAYNIQQRaKERSEGRVNSKTPQGSPSFTDSQEE 299
69**********9999944567788887666666666655554 PP
== domain 7 score: 1.0 bits; conditional E-value: 0.024
SSTTTSTT--S.-EE..EEEE-----SS------------... CS
Methyltransf_10 166 aifdglieene.ryd..vtlCnPPfhaslaeakagserklknl 205
+i + +e++e r + PPf +s++e + ++r +k
tr|W4Y6M0|W4Y6M0_STRPU 302 NIQQRAKERSEgRVNskTPQGSPPFTDSQEEPDNIQQRAPKTS 344
5555556666654431033467**************9998653 PP
Internal pipeline statistics summary:
-------------------------------------
Query model(s): 1 (299 nodes)
Target sequences: 28594 (14266044 residues searched)
Passed MSV filter: 611 (0.0213681); expected 571.9 (0.02)
Passed bias filter: 492 (0.0172064); expected 571.9 (0.02)
Passed Vit filter: 44 (0.00153878); expected 28.6 (0.001)
Passed Fwd filter: 2 (6.99447e-05); expected 0.3 (1e-05)
Initial search space (Z): 28594 [actual number of targets]
Domain search space (domZ): 2 [number of targets reported over threshold]
# CPU time: 0.30u 0.01s 00:00:00.31 Elapsed: 00:00:00.10
# Mc/sec: 42655.47
//
[ok]