# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Methyltransf_12.hmm.txt # target sequence database: proteomes/Ciona_savignyi.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Methyltransf_12 [M=99] Accession: PF08242.11 Description: Methyltransferase domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 2e-17 63.1 0.1 6.5e-17 61.5 0.0 1.8 2 tr|H2YTR8|H2YTR8_CIOSA Methyltransferase-like protein OS=Cio 3.3e-15 56.0 0.1 5.7e-15 55.2 0.1 1.4 1 tr|H2YX78|H2YX78_CIOSA Ubiquinone biosynthesis O-methyltrans 1.7e-11 44.1 0.1 5e-11 42.6 0.1 1.8 1 tr|H2Y8E5|H2Y8E5_CIOSA Uncharacterized protein OS=Ciona savi 8.8e-10 38.6 0.1 7.5e-06 26.0 0.0 2.7 2 tr|H2YI45|H2YI45_CIOSA Uncharacterized protein OS=Ciona savi 1.2e-09 38.1 0.1 4.5e-09 36.3 0.0 1.9 1 tr|H2YGP5|H2YGP5_CIOSA Uncharacterized protein OS=Ciona savi 3.4e-08 33.5 0.0 1.4e-06 28.4 0.0 2.4 1 tr|H2YG63|H2YG63_CIOSA Uncharacterized protein OS=Ciona savi 5.3e-08 32.9 0.0 1e-07 32.0 0.0 1.5 1 tr|H2Z6S3|H2Z6S3_CIOSA Uncharacterized protein OS=Ciona savi 7.7e-08 32.4 0.0 2.1e-07 31.0 0.0 1.8 1 tr|H2ZL66|H2ZL66_CIOSA Uncharacterized protein OS=Ciona savi 7.9e-08 32.3 0.0 1.6e-07 31.3 0.0 1.5 1 tr|H2ZNR9|H2ZNR9_CIOSA Uncharacterized protein OS=Ciona savi 2.8e-07 30.6 0.0 9.3e-07 28.9 0.0 2.0 1 tr|H2Y735|H2Y735_CIOSA Uncharacterized protein OS=Ciona savi 7e-07 29.3 0.0 1.3e-06 28.4 0.0 1.5 1 tr|H2Z439|H2Z439_CIOSA Uncharacterized protein OS=Ciona savi 7.4e-07 29.2 0.0 1.6e-06 28.2 0.0 1.5 1 tr|H2Z0R4|H2Z0R4_CIOSA Uncharacterized protein OS=Ciona savi 1.2e-06 28.6 0.0 2.3e-06 27.6 0.0 1.5 1 tr|H2ZNR4|H2ZNR4_CIOSA Uncharacterized protein OS=Ciona savi 3.1e-06 27.2 0.1 1.2e-05 25.3 0.0 2.0 1 tr|H2YPG7|H2YPG7_CIOSA Uncharacterized protein OS=Ciona savi 4.4e-06 26.7 0.0 2.8e-05 24.2 0.0 2.1 2 tr|H2YJS4|H2YJS4_CIOSA Uncharacterized protein OS=Ciona savi 7.2e-06 26.0 0.0 1.5e-05 25.1 0.0 1.5 1 tr|H2YX31|H2YX31_CIOSA Uncharacterized protein OS=Ciona savi 1.3e-05 25.2 0.0 2.8e-05 24.2 0.0 1.5 1 tr|H2YRT9|H2YRT9_CIOSA Uncharacterized protein OS=Ciona savi 1.4e-05 25.1 0.0 2.7e-05 24.2 0.0 1.5 1 tr|H2ZBM7|H2ZBM7_CIOSA Uncharacterized protein OS=Ciona savi 1.6e-05 24.9 0.4 3.1e-05 24.0 0.0 1.8 1 tr|H2YNF4|H2YNF4_CIOSA Protein-lysine N-methyltransferase OS 2.1e-05 24.5 0.0 3.9e-05 23.7 0.0 1.5 1 tr|H2ZNR6|H2ZNR6_CIOSA Uncharacterized protein OS=Ciona savi 2.7e-05 24.2 0.0 7.2e-05 22.8 0.0 1.7 1 tr|H2YL80|H2YL80_CIOSA Uncharacterized protein OS=Ciona savi 5.2e-05 23.3 0.0 0.00014 21.9 0.0 1.7 1 tr|H2Z4R2|H2Z4R2_CIOSA Uncharacterized protein OS=Ciona savi 6.1e-05 23.1 0.0 8.3e-05 22.6 0.0 1.3 1 tr|H2YX16|H2YX16_CIOSA Uncharacterized protein OS=Ciona savi 0.00025 21.1 0.0 0.00064 19.8 0.0 1.7 1 tr|H2YLQ9|H2YLQ9_CIOSA Uncharacterized protein OS=Ciona savi 0.00048 20.2 0.0 0.00071 19.6 0.0 1.4 1 tr|H2YSN6|H2YSN6_CIOSA tRNA (guanine-N(7)-)-methyltransferas 0.00059 19.9 0.0 0.006 16.7 0.0 2.5 2 tr|H2YXS7|H2YXS7_CIOSA Uncharacterized protein OS=Ciona savi 0.002 18.2 0.0 0.012 15.7 0.0 2.4 2 tr|H2Z5Q2|H2Z5Q2_CIOSA Uncharacterized protein OS=Ciona savi 0.0022 18.1 0.0 0.0039 17.3 0.0 1.4 1 tr|H2ZDH2|H2ZDH2_CIOSA rRNA adenine N(6)-methyltransferase O 0.0022 18.1 0.0 0.0037 17.3 0.0 1.4 1 tr|H2Z5E6|H2Z5E6_CIOSA Uncharacterized protein OS=Ciona savi 0.0023 18.0 0.0 0.004 17.2 0.0 1.5 1 tr|H2Z8Q4|H2Z8Q4_CIOSA Uncharacterized protein OS=Ciona savi 0.0028 17.7 0.0 0.011 15.8 0.0 2.0 1 tr|H2YK68|H2YK68_CIOSA S-adenosylmethionine sensor upstream 0.0032 17.5 0.0 0.0081 16.3 0.0 1.7 1 tr|H2YHG7|H2YHG7_CIOSA Uncharacterized protein OS=Ciona savi 0.0063 16.6 0.2 0.029 14.5 0.1 2.2 1 tr|H2YG33|H2YG33_CIOSA Uncharacterized protein OS=Ciona savi ------ inclusion threshold ------ 0.01 15.9 0.0 0.072 13.2 0.0 2.4 1 tr|H2Y4A1|H2Y4A1_CIOSA Uncharacterized protein OS=Ciona savi 0.03 14.4 0.0 0.051 13.7 0.0 1.4 1 tr|H2YPM5|H2YPM5_CIOSA Uncharacterized protein OS=Ciona savi 0.042 14.0 0.0 0.071 13.2 0.0 1.4 1 tr|H2ZBL6|H2ZBL6_CIOSA Uncharacterized protein OS=Ciona savi 0.047 13.8 0.0 0.078 13.1 0.0 1.4 1 tr|H2Z0U5|H2Z0U5_CIOSA tRNA (adenine(58)-N(1))-methyltransfe 0.068 13.3 0.0 0.14 12.3 0.0 1.6 1 tr|H2ZQD2|H2ZQD2_CIOSA Uncharacterized protein OS=Ciona savi 0.078 13.1 0.0 0.26 11.4 0.0 1.9 1 tr|H2ZH58|H2ZH58_CIOSA Uncharacterized protein OS=Ciona savi 0.11 12.7 0.0 0.21 11.7 0.0 1.5 1 tr|H2YNB5|H2YNB5_CIOSA Uncharacterized protein OS=Ciona savi 0.11 12.7 0.0 0.18 11.9 0.0 1.4 1 tr|H2Z7P3|H2Z7P3_CIOSA Uncharacterized protein OS=Ciona savi Domain annotation for each sequence (and alignments): >> tr|H2YTR8|H2YTR8_CIOSA Methyltransferase-like protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.4 0.0 9.4 2.7e+03 17 45 .. 23 49 .. 14 69 .. 0.55 2 ! 61.5 0.0 2.3e-19 6.5e-17 1 99 [] 83 184 .. 83 184 .. 0.93 Alignments for each domain: == domain 1 score: -1.4 bits; conditional E-value: 9.4 Methyltransf_12 17 klpdieytgvDispsaiedakeklakren 45 k +++++++D+ ++ +e ++k+ + tr|H2YTR8|H2YTR8_CIOSA 23 K--QVSLLVSDFRRDKLELEARKMWDLFY 49 4..66666666666666555555443333 PP == domain 2 score: 61.5 bits; conditional E-value: 2.3e-19 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.....ssfDvvvasnvlhhl..k 80 Le GcG+G+ +++l +k +++ ++++D+sp+a+ ++ +++ + + +n+n +++d++ + +s+D+v++++vl+++ + tr|H2YTR8|H2YTR8_CIOSA 83 LEAGCGVGNAIFPLMDKYSNLFVYACDFSPRAV----QHVKDNPGFSKKNCNAFQCDISTQSLCdniqeNSVDLVTLIFVLSAIhpN 165 89*******************************....99999999999999999999877766689999****************88 PP Methyltransf_12 81 direaldniyklLkpgGrl 99 + +++++ni+k+LkpgG l tr|H2YTR8|H2YTR8_CIOSA 166 KFEFVFENIHKVLKPGGYL 184 999**************86 PP >> tr|H2YX78|H2YX78_CIOSA Ubiquinone biosynthesis O-methyltransferase, mitochondrial OS=Ciona savignyi OX=51511 PE=3 SV # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 55.2 0.1 2e-17 5.7e-15 1 99 [] 117 213 .. 117 213 .. 0.91 Alignments for each domain: == domain 1 score: 55.2 bits; conditional E-value: 2e-17 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 Le+GcG G l ++l++ +++++g+D s a+++ak + + + + ++ +l+++ +g fDvvvas+v++h+++++e++ tr|H2YX78|H2YX78_CIOSA 117 LEVGCGAGVLCEPLARL--GASVLGIDTSDGALAAAKMHRGDAADLSELQYIDATLEDIVGAGTLRFDVVVASEVVEHVDNKAEFVT 201 8****************..**************8888888888887777777777777777777*********************** PP Methyltransf_12 88 niyklLkpgGrl 99 ++ ++Lkp+G l tr|H2YX78|H2YX78_CIOSA 202 QCCDVLKPNGSL 213 **********76 PP >> tr|H2Y8E5|H2Y8E5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.6 0.1 1.8e-13 5e-11 1 99 [] 75 181 .. 75 181 .. 0.79 Alignments for each domain: == domain 1 score: 42.6 bits; conditional E-value: 1.8e-13 Methyltransf_12 1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...........ssfDvvvasnv 75 L++G+G+G+ +al++ pd +tgvD +++ + ++k+ +++++ + + + ++ +g +s+D++++++v tr|H2Y8E5|H2Y8E5_CIOSA 75 LDLGSGSGRDCFALAKLVgPDGFVTGVDMTDEQL-AVANKHVEYHQK---VFGFSKPNVKFVKGYieklgdagiadESVDIIISNCV 157 8***************9999**************.555555555543...333333333333333444555799************* PP Methyltransf_12 76 lhhlkdirealdniyklLkpgGrl 99 ++ +kd++++l+++y++Lk gG l tr|H2Y8E5|H2Y8E5_CIOSA 158 INLVKDKEAVLKEAYRVLKYGGEL 181 **********************76 PP >> tr|H2YI45|H2YI45_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.0 2.6e-08 7.5e-06 1 98 [. 52 151 .. 52 152 .. 0.88 2 ! 9.9 0.0 0.0028 0.8 2 38 .. 488 524 .. 487 563 .. 0.87 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 2.6e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl.......k 80 L iGcG+++l++ + + ++t +Dis+ +i++ +++a++++ ++ ++++ + +dg ++ vv+ ++l ++ tr|H2YI45|H2YI45_CIOSA 52 LVIGCGNSDLSSQIYSA-GFKKLTNIDISKTVIKQMTNRHADKQEMKWMEMDVTKMG--FDDG--HYSVVLDKGTLDAMmsddscdV 133 569***********999.9**************999999999997666666666555..4555..9****************99988 PP Methyltransf_12 81 direaldniyklLkpgGr 98 +i++++++i ++L+ gGr tr|H2YI45|H2YI45_CIOSA 134 TIDSMFAEIDRVLRTGGR 151 999**************7 PP == domain 2 score: 9.9 bits; conditional E-value: 0.0028 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedake 38 iG G G+l+ +ll +p++++t+v+++p+ + a+e tr|H2YI45|H2YI45_CIOSA 488 IIGLGGGTLSLYLLHCFPHCHVTAVELDPEIATVAQE 524 699**************************99877665 PP >> tr|H2YGP5|H2YGP5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 36.3 0.0 1.6e-11 4.5e-09 1 98 [. 35 138 .. 35 139 .. 0.81 Alignments for each domain: == domain 1 score: 36.3 bits; conditional E-value: 1.6e-11 Methyltransf_12 1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.........ssfDvvvasnvlh 77 +++GcG+G+ a+++ ++ e++gvD ++++ d ++k ++++ + + +++ ++ +g ss+D++++++v++ tr|H2YGP5|H2YGP5_CIOSA 35 VDLGCGSGRDCYAIAQLVgENGEVIGVDMTKEQL-DIARKYEEYHRVK---FGFKESNVRFVEGYiedlsfiadSSVDIAISNCVVN 117 59**************9999**************.7777777776643...3333333333333344455669************** PP Methyltransf_12 78 hlkdirealdniyklLkpgGr 98 +++++++++++ + Lk gG tr|H2YGP5|H2YGP5_CIOSA 118 LCENKEAVFKEVFRILKTGGE 138 ********************7 PP >> tr|H2YG63|H2YG63_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.4 0.0 4.8e-09 1.4e-06 1 99 [] 34 151 .. 34 151 .. 0.81 Alignments for each domain: == domain 1 score: 28.4 bits; conditional E-value: 4.8e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg....................... 64 L+iGc +G ++ l+ k +++g+D+s ++ ++ + l++ + + + +l + tr|H2YG63|H2YG63_CIOSA 34 LDIGCAVGGASFTLASK--FDDVIGIDYSHGFV-KTCNALKETGSMEYDVIVEGELTT-----Khtatipdhlrtrctfqqgdacnl 112 8****************..**************.666666665543333333332222.....122456778999999999999999 PP Methyltransf_12 65 ....ssfDvvvasnvlhhlkdirealdniyklLkpgGrl 99 ++f v+a+n+++ l+++ +++ ++ l++pgG+l tr|H2YG63|H2YG63_CIOSA 113 pldlGTFGCVLAANLICRLPNPTDFIMRLNTLVAPGGIL 151 999**********************************87 PP >> tr|H2Z6S3|H2Z6S3_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.0 0.0 3.6e-10 1e-07 2 99 .] 49 156 .. 48 156 .. 0.92 Alignments for each domain: == domain 1 score: 32.0 bits; conditional E-value: 3.6e-10 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl......... 79 +GcG++ ++ l ++ ++t vD+s+ ie+ k+k + ++ ++ +++ +l+ + s+fDvv+ ++l +l tr|H2Z6S3|H2Z6S3_CIOSA 49 ILGCGNSPFSLDLYKD-GYKNVTNVDYSTVCIENMKQKYQNLSEMSWYVMDITNLQFEA----STFDVVIDKGTLDALlveendvwn 130 68***********999.9999***********999999999999888888888888654....5*********************** PP Methyltransf_12 80 ......kdirealdniyklLkpgGrl 99 ++++++l+n+ +Lk gGr+ tr|H2Z6S3|H2Z6S3_CIOSA 131 isetafETMEAVLRNVSTVLKVGGRF 156 ************************86 PP >> tr|H2ZL66|H2ZL66_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.0 0.0 7.4e-10 2.1e-07 1 99 [] 76 167 .. 76 167 .. 0.81 Alignments for each domain: == domain 1 score: 31.0 bits; conditional E-value: 7.4e-10 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++GcG G ++++l e +i+++ D s+s + + + ++ vn+++++l + ++fD+v++s lh+++d+ + + tr|H2ZL66|H2ZL66_CIOSA 76 LDLGCGRGYISQELSEF-DGIDLLfQGDTSQSYL-----NNPCQPKLTTHSVNFNEESLPFRT--DTFDMVLSSMSLHWVNDLPKCF 154 8*************777.8888886679999999.....444444456666777766665554..4********************* PP Methyltransf_12 87 dniyklLkpgGrl 99 +++ + Lkp+G++ tr|H2ZL66|H2ZL66_CIOSA 155 KEVLRILKPDGCF 167 ***********86 PP >> tr|H2ZNR9|H2ZNR9_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.3 0.0 5.8e-10 1.6e-07 1 99 [] 69 165 .. 69 165 .. 0.80 Alignments for each domain: == domain 1 score: 31.3 bits; conditional E-value: 5.8e-10 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+GtG+ + ++++l+ + e+ +D + +++ +a++k +n ++ + +l +d +s+Dv+++ +++ +++a+ tr|H2ZNR9|H2ZNR9_CIOSA 69 LDLGGGTGTSSLFIRNQLQfQGEIDILDANIEMLYKASQKKIGFRN-IIRHFVGKSGELPVRD--ESYDVIISTGAFVPNHIPASAI 152 8*****************5599************777777777774.4444444444445455..5******998877656689*** PP Methyltransf_12 87 dniyklLkpgGrl 99 + + k+L+pgG + tr|H2ZNR9|H2ZNR9_CIOSA 153 QGMIKVLRPGGLI 165 ***********75 PP >> tr|H2Y735|H2Y735_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.9 0.0 3.3e-09 9.3e-07 1 99 [] 385 473 .. 385 473 .. 0.78 Alignments for each domain: == domain 1 score: 28.9 bits; conditional E-value: 3.3e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl...kdire 84 L++GcG+G++l ++ + ++g+D s+s i + +r++ +n l + + +s+D+ +++ v+hh + + tr|H2Y735|H2Y735_CIOSA 385 LDVGCGSGRYLGVCPHH----FILGCDQSSSLI-----NICARKQFTSFVCNGLRLPVRS----NSVDACICIAVVHHYanhQRRTN 458 8*************888....899*********.....4444443333333444343332....4**************99666669 PP Methyltransf_12 85 aldniyklLkpgGrl 99 a++++ +++kpgG++ tr|H2Y735|H2Y735_CIOSA 459 AVRELLRVIKPGGKI 473 *************86 PP >> tr|H2Z439|H2Z439_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.4 0.0 4.5e-09 1.3e-06 1 99 [] 32 128 .. 32 128 .. 0.79 Alignments for each domain: == domain 1 score: 28.4 bits; conditional E-value: 4.5e-09 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+GtGs+++ l+++l+ e+ +D + +++ +a++k +n ++++ dl +d +++Dv+v++ ++ ++ a+ tr|H2Z439|H2Z439_CIOSA 32 LDLGGGTGSVSQLLRNQLQfKGEIDILDANMDMLYKASKKEVGFSNILCHWIGDS-GDLPLRD--ATYDVIVCAAAFLPNHIPAPAI 115 8*****************6599999*********777777777776444444433.3333333..5******9977766566889** PP Methyltransf_12 87 dniyklLkpgGrl 99 + i k++kp+G l tr|H2Z439|H2Z439_CIOSA 116 KGILKVIKPEGLL 128 **********986 PP >> tr|H2Z0R4|H2Z0R4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.2 0.0 5.5e-09 1.6e-06 1 98 [. 63 156 .. 63 157 .. 0.83 Alignments for each domain: == domain 1 score: 28.2 bits; conditional E-value: 5.5e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdir.eal 86 L+i +GtG + + l+ ++ + g+D s++++ k++ + + +n +++ l + l +d+ +Dv +++ +++ ++i+ eal tr|H2Z0R4|H2Z0R4_CIOSA 63 LDIAAGTGLMGELLRSANFKGVIDGIDGSANML--EKAREKGIYRNLIEEFVLPDKALPLKDQ--MYDVTCCLGSMSV-PHIQpEAL 144 8****************8888888*********..4555556666667777777777666665..9************.67777*** PP Methyltransf_12 87 dniyklLkpgGr 98 +++ ++ k gG+ tr|H2Z0R4|H2Z0R4_CIOSA 145 KEFVRVTKTGGM 156 ***********7 PP >> tr|H2ZNR4|H2ZNR4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 27.6 0.0 8.1e-09 2.3e-06 1 99 [] 68 164 .. 68 164 .. 0.81 Alignments for each domain: == domain 1 score: 27.6 bits; conditional E-value: 8.1e-09 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+GtG ++ ++++l+ + e+ +D + +++ +a++k +n ++ + dl +d +s+Dv+v +++ + +a+ tr|H2ZNR4|H2ZNR4_CIOSA 68 LDFGGGTGISSFLIRNQLQfQGEIDIMDANIDMLYKASQKKIGFRN-IIRHFVGKSGDLPVRD--ESYDVIVTTGAFIPKHIPPSAI 151 8****************95599999*********777777777774.5555555556655555..5********9997755577*** PP Methyltransf_12 87 dniyklLkpgGrl 99 + + k+++pgG l tr|H2ZNR4|H2ZNR4_CIOSA 152 QGVIKAIRPGGLL 164 ***********86 PP >> tr|H2YPG7|H2YPG7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.3 0.0 4.3e-08 1.2e-05 1 99 [] 69 165 .. 69 165 .. 0.80 Alignments for each domain: == domain 1 score: 25.3 bits; conditional E-value: 4.3e-08 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+GtG +++ l+ +l+ e+ + + +++ +a++k ++ ++ + dl +d +++Dv+v+s+++ +++a+ tr|H2YPG7|H2YPG7_CIOSA 69 LDLGGGTGLVSQFLRSQLQfKGEIDILNANMDMLYKASKKEVGYST-ILRHWVGDSGDLPFRD--ATYDVIVCSGAFIPNHIPASAI 152 8****************95488899999999999777777777774.4444555555555554..6********9997766788*** PP Methyltransf_12 87 dniyklLkpgGrl 99 + i +++kpgG l tr|H2YPG7|H2YPG7_CIOSA 153 KGILNVIKPGGLL 165 ***********86 PP >> tr|H2YJS4|H2YJS4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -0.0 0.0 3.4 9.7e+02 46 73 .. 20 47 .. 2 74 .. 0.51 2 ! 24.2 0.0 9.7e-08 2.8e-05 1 99 [] 84 178 .. 84 178 .. 0.76 Alignments for each domain: == domain 1 score: -0.0 bits; conditional E-value: 3.4 Methyltransf_12 46 nnnnnvnlealdlldldgg...ssfDvvvas 73 ++ ++v++ d ++ +++D+ + tr|H2YJS4|H2YJS4_CIOSA 20 KSLERVQNIIGDFDS---DhtmKYYDYWSEH 47 333444444444333...2345899987654 PP == domain 2 score: 24.2 bits; conditional E-value: 9.7e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L+iG+GtG+++ al + + + ++D ++ ++ +k ++ +++ +l ++d + +++D+vv+++++ e l tr|H2YJS4|H2YJS4_CIOSA 84 LDIGAGTGQMAIALKNIQYEGLIDALDGNSLML----KKAEGKGLYRTLTRHLLTTDSPLPYESNKYDAVVCCCAMVPALIQPECLP 166 8*************9998899999*********....4444444444444444444444444448*******98887755555**** PP Methyltransf_12 88 niyklLkpgGrl 99 +++++kpgG+l tr|H2YJS4|H2YJS4_CIOSA 167 DMARVVKPGGQL 178 **********97 PP >> tr|H2YX31|H2YX31_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.1 0.0 5.1e-08 1.5e-05 1 99 [] 69 165 .. 69 165 .. 0.77 Alignments for each domain: == domain 1 score: 25.1 bits; conditional E-value: 5.1e-08 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+GtG+ + ++++l+ + e+ +D + +++ +a++k +n ++ + +l +d +s+Dv+++ +++ +++a+ tr|H2YX31|H2YX31_CIOSA 69 LDLGGGTGTSSLFIRNQLQfQGEIDILDANIEMLYKASQKKIGFRN-IIRHFVGKSGELPVRD--ESYDVIISTGAFVPNHIPASAI 152 8*****************5599************777777777774.4444444444445455..5******997776555577899 PP Methyltransf_12 87 dniyklLkpgGrl 99 + + k+++ gG l tr|H2YX31|H2YX31_CIOSA 153 QGMIKAIRSGGLL 165 9999999888875 PP >> tr|H2YRT9|H2YRT9_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.2 0.0 9.8e-08 2.8e-05 1 98 [. 66 162 .. 66 163 .. 0.84 Alignments for each domain: == domain 1 score: 24.2 bits; conditional E-value: 9.8e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirea 85 L+ G+G G++++ ll + ++ +++++++e+a++ l + +++ n + +d l+l++ +++Dv+++ v hl ++ ++ tr|H2YRT9|H2YRT9_CIOSA 66 LDCGAGIGRVAKNLLLP-IFKTVDLAELNSKFLEQARTYLGEGSKRVGNYFCCGLQD-LQLEE-KTYDVIWVQWVTGHLtdAHFVKF 149 899***********999.999999*********999999999887655544444333.44444.4**************777777** PP Methyltransf_12 86 ldniyklLkpgGr 98 l+ ++++L++gG tr|H2YRT9|H2YRT9_CIOSA 150 LNMCKAALRKGGL 162 ************7 PP >> tr|H2ZBM7|H2ZBM7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.2 0.0 9.5e-08 2.7e-05 2 71 .. 204 282 .. 203 307 .. 0.93 Alignments for each domain: == domain 1 score: 24.2 bits; conditional E-value: 9.5e-08 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..........ssfDvvv 71 +G+G+G +l +l +k + +t +Di++ +ie+ak +l+ +++++ ++++ e+ +++ d ++fD+++ tr|H2ZBM7|H2ZBM7_CIOSA 204 ILGGGDGGILNYLKDK-GPKMITMIDIDEMVIEAAKIHLRGICGDSLDQYEGENYKVIVGDCIeylkeyiskgQKFDYII 282 68**************.999999*********************************998777799999999999999997 PP >> tr|H2YNF4|H2YNF4_CIOSA Protein-lysine N-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.0 0.0 1.1e-07 3.1e-05 1 77 [. 64 140 .. 64 184 .. 0.74 Alignments for each domain: == domain 1 score: 24.0 bits; conditional E-value: 1.1e-07 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...ssfDvvvasnvlh 77 L++GcG+G +l al++ +++g+D+ +sa++ a++ ++k++ + n +n+ + dl ++ + + v++s++l+ tr|H2YNF4|H2YNF4_CIOSA 64 LDVGCGNGLMLLALAKL-GYKNLVGIDYCQSALDLASAVFRKEN--FENVCNWIQMDLTSQTLIwdkNCYGCVTVSDLLE 140 8************9888.999999*********77777776666..5779999999998877667774444444444443 PP >> tr|H2ZNR6|H2ZNR6_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.7 0.0 1.4e-07 3.9e-05 1 98 [. 68 163 .. 68 164 .. 0.78 Alignments for each domain: == domain 1 score: 23.7 bits; conditional E-value: 1.4e-07 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+GtG ++ ++++l+ + e+ +D + +++ +a++k + +n ++ + dl +d +s+Dv+v +++ ++ a+ tr|H2ZNR6|H2ZNR6_CIOSA 68 LDFGGGTGISSFLIRNQLQfQGEIDIMDANIDMLYKASQKKIAFRN-IIRHFVGKSGDLPVRD--ASYDVIVTTGAFIPKHIPATAI 151 8*****************55999***********777777777774.4555555555555555..5*******99986655566888 PP Methyltransf_12 87 dniyklLkpgGr 98 + + k+++ gG tr|H2ZNR6|H2ZNR6_CIOSA 152 QGVIKAIRSGGL 163 888888888886 PP >> tr|H2YL80|H2YL80_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.0 2.6e-07 7.2e-05 1 84 [. 87 184 .. 87 196 .. 0.71 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 2.6e-07 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsai....edakeklakrennnnnnvnlealdlldldgg...........ssfDvvva 72 L++GcG G + ++ ++ ++ +++++D+ + ++ ++ ++ ++++n++ ++ + d + + ++D+ + tr|H2YL80|H2YL80_CIOSA 87 LDLGCGKGGDILKWDKA-RPNHLICTDLAETSVsqckDRYALLKKRHRNKQIFTTEFIVADSS----KenlnekvqdkqMKYDITSC 168 8*************999.999************444433344444444444444555555544....234569************** PP Methyltransf_12 73 snvlhhl....kdire 84 +v+h+ ++ tr|H2YL80|H2YL80_CIOSA 169 QFVIHYSfeseEQATM 184 ******9755444444 PP >> tr|H2Z4R2|H2Z4R2_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.9 0.0 4.9e-07 0.00014 1 90 [. 56 141 .. 56 154 .. 0.74 Alignments for each domain: == domain 1 score: 21.9 bits; conditional E-value: 4.9e-07 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl....kdir 83 L++GcG+G + l ++ + +g+Dis+++++ a+ + + + + + + + sfD v+++++l++l k+++ tr|H2Z4R2|H2Z4R2_CIOSA 56 LDVGCGSGLSGECLSDQ--GHVWIGLDISSAMLDVARDREVDGDVLLSDAGQGICFRPG------SFDGVISISALQWLcnadKKTH 134 8******9777766666..55555*********88888877777655555555555544......**************88664444 PP Methyltransf_12 84 ealdniy 90 ++++y tr|H2Z4R2|H2Z4R2_CIOSA 135 NPIKRLY 141 4444444 PP >> tr|H2YX16|H2YX16_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.6 0.0 2.9e-07 8.3e-05 1 76 [. 15 88 .. 15 105 .. 0.79 Alignments for each domain: == domain 1 score: 22.6 bits; conditional E-value: 2.9e-07 Methyltransf_12 1 LeiGcGtGsllralleklp.dieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvl 76 L++G+GtG+ + ++++l+ + e+ +D + +++ +a++k +n ++ + +l +d +s+Dv+++ +++ tr|H2YX16|H2YX16_CIOSA 15 LDLGGGTGTSSLFIRNQLQfQGEIDILDANIEMLYKASQKKIGFRN-IIRHFVGKSGELPVRD--ESYDVIISTGAF 88 8*****************5599************777777777774.4444444444445455..5******98765 PP >> tr|H2YLQ9|H2YLQ9_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.8 0.0 2.2e-06 0.00064 2 98 .. 129 236 .. 128 237 .. 0.72 Alignments for each domain: == domain 1 score: 19.8 bits; conditional E-value: 2.2e-06 Methyltransf_12 2 eiGcGtGsllrallekl........pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.....ssfDvvvasnv 75 e+G+G++sl+ ++ + + d + +vD ++i + + +++e + ++ +l dl+++ ++fD v++s++ tr|H2YLQ9|H2YLQ9_CIOSA 129 ELGGGSSSLAGMCVAFNswstevvvTDGNSKCVDTLNDVI-KMNKVSKRKELSCGPQISAVELRW-DLQSNfsqyhHAFDFVLCSDC 213 99***********999987777777677777777777777.333333333333334444444442.33333577889********** PP Methyltransf_12 76 lhhlkdirealdniyklLkpgGr 98 l + +++++d iy lLkp+G tr|H2YLQ9|H2YLQ9_CIOSA 214 LFFDEYRQSLVDTIYYLLKPEGT 236 **99*****************95 PP >> tr|H2YSN6|H2YSN6_CIOSA tRNA (guanine-N(7)-)-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.6 0.0 2.5e-06 0.00071 1 55 [. 71 125 .. 71 193 .. 0.89 Alignments for each domain: == domain 1 score: 19.6 bits; conditional E-value: 2.5e-06 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlea 55 L+iGcG G ll al + lp++ ++g++i ++ e +e++++ ++ +++n n+++ tr|H2YSN6|H2YSN6_CIOSA 71 LDIGCGYGGLLIALSKLLPETLILGLEIRVKVSEYVQERIQALRKADTENKNFQN 125 8*****************9999******999998888888888877766666665 PP >> tr|H2YXS7|H2YXS7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.7 0.0 2.1e-05 0.006 1 89 [. 42 139 .. 42 149 .. 0.85 2 ? -0.0 0.0 3.4 9.5e+02 19 38 .. 420 438 .. 410 488 .. 0.81 Alignments for each domain: == domain 1 score: 16.7 bits; conditional E-value: 2.1e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg........ssfDvvvasnvlhhl 79 +++Gc l+ l+ + e+ gvD++ s + + + + +++++ n +++ l + +g +D+vv++++++hl tr|H2YXS7|H2YXS7_CIOSA 42 VDLGCAECKLINLLRHEDYVKEISGVDLDGSLL-RGCSHKLDPQAYDFLNKRFNPLTIRLYQGSvsefderlRNYDAVVSIELIEHL 127 59***************99**************.88888888888999999999999776666699999****************** PP Methyltransf_12 80 ..kdirealdni 89 k+++++ + + tr|H2YXS7|H2YXS7_CIOSA 128 lpKTLEDFPQAV 139 886666655555 PP == domain 2 score: -0.0 bits; conditional E-value: 3.4 Methyltransf_12 19 pdieytgvDispsaiedake 38 +++ + +D++p++i +a tr|H2YXS7|H2YXS7_CIOSA 420 GNLHTLNCDFDPEMI-HAND 438 577888899999999.5544 PP >> tr|H2Z5Q2|H2Z5Q2_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.5 0.1 9.6 2.7e+03 42 42 .. 54 54 .. 17 112 .. 0.59 2 ! 15.7 0.0 4.4e-05 0.012 1 77 [. 147 224 .. 147 234 .. 0.67 Alignments for each domain: == domain 1 score: -1.5 bits; conditional E-value: 9.6 Methyltransf_12 42 k 42 + tr|H2Z5Q2|H2Z5Q2_CIOSA 54 S 54 2 PP == domain 2 score: 15.7 bits; conditional E-value: 4.4e-05 Methyltransf_12 1 LeiGcGtGsllrallekl...pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...ssfDvvvasnvlh 77 L++G+GtG +++ ++kl + +y++vD s+++ + + l+ + + +l + + + ++D+v++s +l+ tr|H2Z5Q2|H2Z5Q2_CIOSA 147 LDFGSGTG-TSMWAANKLwkeSLKQYVCVDSSEHMN-RLSHTLHTTADT---ESDLPPGIFIRKFLPsfkMTYDLVISSYTLS 224 8*******.677777888899999***********9.333333333322...2222222222222225558999999999887 PP >> tr|H2ZDH2|H2ZDH2_CIOSA rRNA adenine N(6)-methyltransferase OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.0 1.4e-05 0.0039 1 44 [. 56 97 .. 56 125 .. 0.82 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 1.4e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakre 44 LeiG GtG+++ ++lek ++++++i+p++ + +++ + tr|H2ZDH2|H2ZDH2_CIOSA 56 LEIGPGTGNMTIKILEK--VNKVVACEIDPRMSAELQKRVSGTP 97 8****************..**************88888777655 PP >> tr|H2Z5E6|H2Z5E6_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.0 1.3e-05 0.0037 36 99 .] 4 64 .. 1 64 [. 0.78 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 1.3e-05 Methyltransf_12 36 akeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdniyklLkpgGrl 99 ++k + ++n +++ e++ d+ +s+Dv+++++ ++ ++ ++ + +lLkpgG++ tr|H2Z5E6|H2Z5E6_CIOSA 4 EAQKKSLYRNLTIHFISSENRIPVDD---ASYDVIISIGGFSPSHIQADCIKDVVRLLKPGGIF 64 56666677777777777777766655...4*********999975566**************85 PP >> tr|H2Z8Q4|H2Z8Q4_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.2 0.0 1.4e-05 0.004 1 71 [. 71 144 .. 71 175 .. 0.71 Alignments for each domain: == domain 1 score: 17.2 bits; conditional E-value: 1.4e-05 Methyltransf_12 1 LeiGcGtGsllrallekl....pdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvv 71 L++GcGtG l++ +++ ++ie vD+ ++ + + k+ ++k++ ++ ++ +++++ +++D+++ tr|H2Z8Q4|H2Z8Q4_CIOSA 71 LDVGCGTGVLSMFAAKAGaakvIGIECSsIVDYAKKIVVANKLDHSKYGSPLFTLLKGKVEEVVLP--VEKVDIIL 144 8*************9997777766666667777777777777777777776666666666665432..25777776 PP >> tr|H2YK68|H2YK68_CIOSA S-adenosylmethionine sensor upstream of mTORC1 OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.8 0.0 3.9e-05 0.011 20 99 .] 143 231 .. 130 231 .. 0.62 Alignments for each domain: == domain 1 score: 15.8 bits; conditional E-value: 3.9e-05 Methyltransf_12 20 dieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg......ssfDvvvasnvlhhl..kdir.ealdniyklLkpgG 97 + e t++D+sp+ + + + + e ++ ++ ++++ + +++Dvvv s +l+++ ++ r e+ +++++L+ +G tr|H2YK68|H2YK68_CIOSA 143 EFETTAIDLSPANDTVYQCDFISVEVSDVGTPVFQSTEVDIFSRKittlpkNHYDVVVFSLLLSYIpcPQARwEMCVKAHQVLSTNG 229 5566666666666644444444444444433333333333222225666679**************77444447777999*****99 PP Methyltransf_12 98 rl 99 +l tr|H2YK68|H2YK68_CIOSA 230 IL 231 86 PP >> tr|H2YHG7|H2YHG7_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=3 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.3 0.0 2.9e-05 0.0081 1 98 [. 78 174 .. 78 175 .. 0.79 Alignments for each domain: == domain 1 score: 16.3 bits; conditional E-value: 2.9e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvv...asnvlhhlkdire 84 L++G+GtG l+ ++++ ++++++ s a +ak+ ++ ++v + ++ l+d ++++D++v + +l + + + tr|H2YHG7|H2YHG7_CIOSA 78 LDVGAGTGILSCFCAQA-GARKVYAIEASNIAE-QAKKVVETNGL--SERVVVMQCILEDAFLPEKVDIIVsewMGYCLLYESMLSS 160 8**************99.777788999888887.66666666554..456666667677777778*****97777788888788888 PP Methyltransf_12 85 aldniyklLkpgGr 98 ++ ++LkpgG tr|H2YHG7|H2YHG7_CIOSA 161 VITARDRWLKPGGL 174 888888******96 PP >> tr|H2YG33|H2YG33_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.5 0.1 0.0001 0.029 1 42 [. 56 98 .. 56 134 .. 0.64 Alignments for each domain: == domain 1 score: 14.5 bits; conditional E-value: 0.0001 Methyltransf_12 1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklak 42 Le+GcG+G +++ l+ l + y ++D ++sa e a+ tr|H2YG33|H2YG33_CIOSA 56 LEVGCGSGVVSAFLATILgDSTAYFCTDRNQSAASCCVETSAA 98 8***********9999996677777999999998333333333 PP >> tr|H2Y4A1|H2Y4A1_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.2 0.0 0.00025 0.072 4 98 .. 155 289 .. 152 290 .. 0.74 Alignments for each domain: == domain 1 score: 13.2 bits; conditional E-value: 0.00025 Methyltransf_12 4 GcGtGsllrallekl...pdieyt.gvDispsai...edakeklakrennnnnnvnlealdlldldgg................... 64 GcG G+l+ +++++ ++ e+ ++ + +++i ++ +++ +++ + +v+ ++++l+ ++ tr|H2Y4A1|H2Y4A1_CIOSA 155 GCGLGRLAWEFARRGyfsQGNEFSfYMLFTSHFIinrTQGDNETDFHQYTVHPWVDQRCNNLSWDHAVkavkfpdvnpgvlayknrf 241 788888888888887777444444233344444456666666666666666666666666655444337777788888888888888 PP Methyltransf_12 65 ..............ssfDvvvasnvlhhlkdirealdniyklLkpgGr 98 +s+D v + ++ ++ +++++iy+ Lk gG+ tr|H2Y4A1|H2Y4A1_CIOSA 242 siaagdfldiytqaDSWDSVATCYFIDTAHNVISYIERIYHILKSGGV 289 888888999999999*******************************96 PP >> tr|H2YPM5|H2YPM5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.7 0.0 0.00018 0.051 1 97 [. 69 161 .. 69 163 .. 0.71 Alignments for each domain: == domain 1 score: 13.7 bits; conditional E-value: 0.00018 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdir.eal 86 L++ +GtG al+ +++++D s+++++ ak+k+ e + v+ + +d +sfD+++ ++++ + i+ + + tr|H2YPM5|H2YPM5_CIOSA 69 LDLSAGTGLGGVALRHVGFLGDIYALDGSKEMLKYAKNKHVYSE-VTESIVTTSTPLP-YND--NSFDLIIGIGCFGK-NMIQpDCF 150 7888999988888877777899***********55555544333.3333333333332.222..4**********999.67777999 PP Methyltransf_12 87 dniyklLkpgG 97 + i ++Lk g tr|H2YPM5|H2YPM5_CIOSA 151 QDIMRVLKSGC 161 99999999986 PP >> tr|H2ZBL6|H2ZBL6_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.2 0.0 0.00025 0.071 23 71 .. 2 60 .. 1 64 [. 0.93 Alignments for each domain: == domain 1 score: 13.2 bits; conditional E-value: 0.00025 Methyltransf_12 23 ytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..........ssfDvvv 71 +t +Di++ +ie+a+ +l+ +++++ ++++ e+ +++ d ++fD+++ tr|H2ZBL6|H2ZBL6_CIOSA 2 ITMIDIDEMVIEAARIHLRGICGDSLDQYEGENYKVIIGDCVeylkeyiskgQKFDYII 60 689********************************998877799999999999999997 PP >> tr|H2Z0U5|H2Z0U5_CIOSA tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A OS=Ciona savignyi OX=5151 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.1 0.0 0.00027 0.078 2 94 .. 107 195 .. 106 201 .. 0.68 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.00027 Methyltransf_12 2 eiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvas.nvlhhlkdireal 86 e G+G+Gsl++a+ + + ++ y+ v++++ e+a++++++++ n v++ ++d+l++ f v ++ + ++ ++ a+ tr|H2Z0U5|H2Z0U5_CIOSA 107 ESGTGSGSLSHAIIRTIAPSGYLhTVEFHEGRAEKARLEFKEHGLSN--YVTVYHRDVLKD----GFPVTSVAdAIFLDIPSPENAI 187 569**************5555555*********99999999999755..666666666654....4554443323444445555555 PP Methyltransf_12 87 dniyklLk 94 + + ++Lk tr|H2Z0U5|H2Z0U5_CIOSA 188 STASNALK 195 55555555 PP >> tr|H2ZQD2|H2ZQD2_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.3 0.0 0.0005 0.14 2 73 .. 54 128 .. 53 151 .. 0.75 Alignments for each domain: == domain 1 score: 12.3 bits; conditional E-value: 0.0005 Methyltransf_12 2 eiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldgg......ssfDvvvas 73 ++GcG G l+ +++y+ gvDi+++a+ ++e ++ v+ + d+ +l++ ++fD+v+++ tr|H2ZQD2|H2ZQD2_CIOSA 54 DLGCGCGILSIGSSIL--GASYClGVDIDKEALGIFLSNCEDYELES--TVDCVHSDVVKLASCrnvlrkKQFDTVIMN 128 89*****887666555..999999*********66666666666544..4444444444444445568889*****997 PP >> tr|H2ZH58|H2ZH58_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.4 0.0 0.00094 0.26 6 54 .. 372 418 .. 372 437 .. 0.76 Alignments for each domain: == domain 1 score: 11.4 bits; conditional E-value: 0.00094 Methyltransf_12 6 GtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnle 54 G G+l+++ll+++p+ie+tg+ sps+ ++k+ + + +n ++++l tr|H2ZH58|H2ZH58_CIOSA 372 GKGQLMQELLKDIPEIEVTGYQQSPSFHIRRKNSTD--RSENLKFLKLL 418 89*************************944444444..44444444444 PP >> tr|H2YNB5|H2YNB5_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.7 0.0 0.00074 0.21 1 79 [. 140 224 .. 140 237 .. 0.73 Alignments for each domain: == domain 1 score: 11.7 bits; conditional E-value: 0.00074 Methyltransf_12 1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.......ssfDvvvasnvlhhl 79 L +Gc +G +l ++l+kl + +++ +++++++ i da++ l k + + +v++ ++ + s+fD v+++ + h+ tr|H2YNB5|H2YNB5_CIOSA 140 LVVGCYVGYVLLRILRKLpRSARVFVIEPNQEYI-DAAKSLVKMVGSDG-QVTFISAEAVTVIPTfaqdyavSKFDFVFLNRTKHNA 224 569***************6678888*********.77777777665443.3333333333333335668899999999988877765 PP >> tr|H2Z7P3|H2Z7P3_CIOSA Uncharacterized protein OS=Ciona savignyi OX=51511 PE=4 SV=1 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.9 0.0 0.00063 0.18 61 99 .] 44 87 .. 15 87 .. 0.79 Alignments for each domain: == domain 1 score: 11.9 bits; conditional E-value: 0.00063 Methyltransf_12 61 ldggssfDvvvasnvlhhl......kdirealdniyklLkpgGrl 99 ++ +Dv+ + +v ++ + i+++++++ k L+ gG+l tr|H2Z7P3|H2Z7P3_CIOSA 44 FQE-PEYDVIMCMSVTKWMhmnwgdAGIKKTFERFFKQLRAGGKL 87 223.49*************************************97 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (99 nodes) Target sequences: 11592 (4231397 residues searched) Passed MSV filter: 454 (0.0391649); expected 231.8 (0.02) Passed bias filter: 415 (0.0358006); expected 231.8 (0.02) Passed Vit filter: 72 (0.00621118); expected 11.6 (0.001) Passed Fwd filter: 41 (0.00353692); expected 0.1 (1e-05) Initial search space (Z): 11592 [actual number of targets] Domain search space (domZ): 41 [number of targets reported over threshold] # CPU time: 0.10u 0.00s 00:00:00.10 Elapsed: 00:00:00.03 # Mc/sec: 13963.61 // [ok]