# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Methyltransf_12.hmm.txt # target sequence database: proteomes/Natronomonas_moolapensis.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Methyltransf_12 [M=99] Accession: PF08242.11 Description: Methyltransferase domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 7.5e-15 52.8 0.0 1.1e-14 52.4 0.0 1.2 1 tr|M1XNA3|M1XNA3_NATM8 Probable demethylmenaquinone methyltr 1.2e-13 49.0 0.0 1.7e-13 48.5 0.0 1.3 1 tr|M1Y4D2|M1Y4D2_NATM8 Probable S-adenosylmethionine-depende 1.8e-13 48.4 0.0 4.6e-13 47.1 0.0 1.7 1 tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransfer 4.4e-11 40.7 0.0 7.1e-11 40.1 0.0 1.3 1 tr|M1XP07|M1XP07_NATM8 Probable S-adenosylmethionine-depende 3.4e-09 34.7 0.1 9.1e-09 33.3 0.0 1.7 2 tr|M1XLC7|M1XLC7_NATM8 Probable S-adenosylmethionine-depende 5.3e-09 34.1 0.0 9.9e-09 33.2 0.0 1.5 1 tr|M1XLH6|M1XLH6_NATM8 Homolog to S-adenosylmethionine-depen 5.5e-09 34.0 0.0 1e-08 33.2 0.0 1.5 1 tr|M1XQI1|M1XQI1_NATM8 Probable S-adenosylmethionine-depende 1.1e-08 33.0 0.1 1.9e-08 32.3 0.1 1.4 1 tr|M1XNP7|M1XNP7_NATM8 Probable S-adenosylmethionine-depende 1.3e-08 32.8 0.0 2.5e-08 31.9 0.0 1.5 1 tr|M1XL59|M1XL59_NATM8 Probable S-adenosylmethionine-depende 5.4e-08 30.8 0.0 8.9e-08 30.1 0.0 1.4 1 tr|M1XKD3|M1XKD3_NATM8 Probable S-adenosylmethionine-depende 1.6e-06 26.1 0.0 2.9e-06 25.3 0.0 1.4 1 tr|M1XQ74|M1XQ74_NATM8 Probable S-adenosylmethionine-depende 1.7e-06 26.0 0.0 7.8e-06 23.9 0.0 2.0 2 tr|M1XTN7|M1XTN7_NATM8 Probable S-adenosylmethionine-depende 4.6e-06 24.7 0.0 1e-05 23.5 0.0 1.7 1 tr|M1Y1T3|M1Y1T3_NATM8 Probable S-adenosylmethionine-depende 6.1e-06 24.3 0.0 4.1e-05 21.6 0.0 2.0 2 tr|M1XRL7|M1XRL7_NATM8 Probable S-adenosylmethionine-depende 2.8e-05 22.1 0.1 6.3e-05 21.0 0.1 1.6 1 tr|M1XTL7|M1XTL7_NATM8 tRNA (Adenine-N(1))-methyltransferase 8.6e-05 20.6 0.0 0.00014 19.9 0.0 1.4 1 tr|M1Y1P2|M1Y1P2_NATM8 Probable S-adenosylmethionine-depende 0.00017 19.7 0.0 0.00035 18.6 0.0 1.6 1 tr|M1XS10|M1XS10_NATM8 Probable rRNA methyltransferase OS=Na 0.00031 18.8 0.1 0.00092 17.3 0.0 1.9 1 tr|M1XZU1|M1XZU1_NATM8 Protein-L-isoaspartate O-methyltransf 0.001 17.1 0.0 0.0019 16.2 0.0 1.5 1 tr|M1XNL1|M1XNL1_NATM8 Homolog to S-adenosylmethionine-depen 0.0011 17.0 0.0 0.036 12.2 0.0 2.4 1 tr|M1XL04|M1XL04_NATM8 Protein-glutamate O-methyltransferase 0.0096 14.0 0.0 0.014 13.5 0.0 1.2 1 tr|M1Y5Q2|M1Y5Q2_NATM8 Probable cobalt-precorrin-6B C(15)-me ------ inclusion threshold ------ 0.01 13.9 0.0 0.026 12.6 0.0 1.6 1 tr|M1XRN3|M1XRN3_NATM8 Probable ribosomal RNA small subunit Domain annotation for each sequence (and alignments): >> tr|M1XNA3|M1XNA3_NATM8 Probable demethylmenaquinone methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 52.4 0.0 8.6e-17 1.1e-14 1 98 [. 50 141 .. 50 142 .. 0.92 Alignments for each domain: == domain 1 score: 52.4 bits; conditional E-value: 8.6e-17 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L++GcGtG ++ lle+ + ++ g+D s++++e+a k+ kr++ n+++ + e l +d+ sfD+ ++s+ +++++d+ +al+ tr|M1XNA3|M1XNA3_NATM8 50 LDVGCGTGFATEGLLEH--TDDVWGLDQSAHQLEKAFGKFGKRDRVNFHRGDAERLPFADD----SFDAYWSSGSIEYWPDPVAALR 130 8****************..***********************9987777777777776655....********************** PP Methyltransf_12 88 niyklLkpgGr 98 +++++ kpgG tr|M1XNA3|M1XNA3_NATM8 131 EARRVTKPGGP 141 *********95 PP >> tr|M1Y4D2|M1Y4D2_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 48.5 0.0 1.4e-15 1.7e-13 1 94 [. 49 139 .. 49 144 .. 0.86 Alignments for each domain: == domain 1 score: 48.5 bits; conditional E-value: 1.4e-15 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhlkdireal 86 Le+ cGtG+++ +l+++ +++++g+Dis++++e+ ++k ++ + + + + + d++ l+ + ++fD+v+a ++h +d++ ++ tr|M1Y4D2|M1Y4D2_NATM8 49 LEVACGTGRFTVMLADR--GADIVGMDISEAMLEQGRRKARSAG--VDESLSFIQGDAGRLPFPdDHFDAVLAMRFFHLAPDPEGFI 131 8****************..**************66666655555..56677777777777766678********************* PP Methyltransf_12 87 dniyklLk 94 ++++++ + tr|M1Y4D2|M1Y4D2_NATM8 132 AEMRRVAT 139 ****9987 PP >> tr|M1XL08|M1XL08_NATM8 Probable arsenite(III)-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 47.1 0.0 3.7e-15 4.6e-13 1 99 [] 100 197 .. 100 197 .. 0.90 Alignments for each domain: == domain 1 score: 47.1 bits; conditional E-value: 3.7e-15 Methyltransf_12 1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L++G+G G + +++ ++ +++gvD p++i++a++ ++++++n+++ e ++l +d s Dv+++++v++ +d+ +++ tr|M1XL08|M1XL08_NATM8 100 LDLGSGAGFDCFLAAQEVgETGRVIGVDMTPEMIKKARANASQNGAENVEFRLGEIEHLPVSDD--SIDVIISNCVVNLSPDKPQVF 184 8************9999999**************999999999998776666666666666655..********************* PP Methyltransf_12 87 dniyklLkpgGrl 99 d++ ++L+pgGrl tr|M1XL08|M1XL08_NATM8 185 DEAFRVLRPGGRL 197 ***********97 PP >> tr|M1XP07|M1XP07_NATM8 Probable S-adenosylmethionine-dependent methyltransferase (Homolog to 24-sterol C-methyltrans # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.1 0.0 5.7e-13 7.1e-11 1 99 [] 43 136 .. 43 136 .. 0.82 Alignments for each domain: == domain 1 score: 40.1 bits; conditional E-value: 5.7e-13 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..ssfDvvvasnvlhhlkdirea 85 L++GcG+G ral+e++ ++++g+D p+++ + ++ + + +++ l +s+D +++ +++ + +d++++ tr|M1XP07|M1XP07_NATM8 43 LDLGCGSGYAGRALREATDAARVYGLDGAPEMV-RNARSYTDDPAVGYVLGDFDSLP------FvdDSVDHAFSMEAFYYAPDPHST 122 8********************************.44444444444444444444444......2356******************** PP Methyltransf_12 86 ldniyklLkpgGrl 99 l +++++L+pgG + tr|M1XP07|M1XP07_NATM8 123 LCELRRVLRPGGTF 136 ************75 PP >> tr|M1XLC7|M1XLC7_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -2.2 0.0 9 1.1e+03 56 71 .. 19 36 .. 3 39 .. 0.53 2 ! 33.3 0.0 7.3e-11 9.1e-09 1 91 [. 48 137 .. 48 138 .. 0.82 Alignments for each domain: == domain 1 score: -2.2 bits; conditional E-value: 9 Methyltransf_12 56 ldlldldgg..ssfDvvv 71 d+ +++++ +++D+vv tr|M1XLC7|M1XLC7_NATM8 19 YDDTQDAPEyrAAVDLVV 36 222223333667888887 PP == domain 2 score: 33.3 bits; conditional E-value: 7.3e-11 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirea 85 +++G+GtG+++ al+++ +++g Dis ++e+a++k + + +++ + +d + ++g +Dvv++++++hhl +++rea tr|M1XLC7|M1XLC7_NATM8 48 VDLGTGTGAIALALADD--AGRVIGRDISDGMLERAAAKADDAGVPGVAFGPGRFRD-PNVPEGVDVDVVTSNFAMHHLsdAEKREA 131 59***************..**************999999888875444444444333.4555668**************98888899 PP Methyltransf_12 86 ldniyk 91 ++ +++ tr|M1XLC7|M1XLC7_NATM8 132 IETLAE 137 988776 PP >> tr|M1XLH6|M1XLH6_NATM8 Homolog to S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (stra # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.2 0.0 8e-11 9.9e-09 1 97 [. 41 129 .. 41 131 .. 0.80 Alignments for each domain: == domain 1 score: 33.2 bits; conditional E-value: 8e-11 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L++ +GtG+++ +l+e+ + ++ +vD+s +a+++a ++ a++++ ++++++ + +d + + + +++D++++s++ ++l tr|M1XLH6|M1XLH6_NATM8 41 LDVATGTGRNALYLAEH--GYDVEAVDVSDEALARA-RRRADERGVDVTWIRADLTDPGFDLETGAYDLITVSFFAAL-----DLLP 119 89***************..**************555.55566666899********99999999*******9865444.....5555 PP Methyltransf_12 88 niyklLkpgG 97 ++++L+pgG tr|M1XLH6|M1XLH6_NATM8 120 DLKEALAPGG 129 5555555555 PP >> tr|M1XQI1|M1XQI1_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.2 0.0 8.3e-11 1e-08 1 99 [] 42 124 .. 42 124 .. 0.81 Alignments for each domain: == domain 1 score: 33.2 bits; conditional E-value: 8.3e-11 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L++G+G+G+++ + + +vD+ + ++ ++++ + e v+ a+dl dg s+D+vv+ +++hh++ ++ l+ tr|M1XQI1|M1XQI1_NATM8 42 LDVGGGSGRVAGETGAT-------VVDPARGML--RRARRRGLE-----SVQASATDLPHPDG--SVDAVVVVDAFHHFPAGQRCLS 112 89******999888777.......*********..333333444.....45555555555554..********************** PP Methyltransf_12 88 niyklLkpgGrl 99 +++++L+pgG+l tr|M1XQI1|M1XQI1_NATM8 113 EMARVLAPGGVL 124 **********97 PP >> tr|M1XNP7|M1XNP7_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 32.3 0.1 1.5e-10 1.9e-08 1 98 [. 42 133 .. 42 134 .. 0.88 Alignments for each domain: == domain 1 score: 32.3 bits; conditional E-value: 1.5e-10 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl...kdire 84 L++GcG+G+ ++ l+ + +++g+D+s + +a+e+ + l + d g ++ ++v +lhhl + +re tr|M1XNP7|M1XNP7_NATM8 42 LDVGCGNGRHTELLAGH--ADRVLGLDVSHGLLSAARERAPGAALVAGDAASLPVAD-----G--AVGLAVYVATLHHLptrRLRRE 119 8****************..**************999999999997555555555555.....4..9*************9966666* PP Methyltransf_12 85 aldniyklLkpgGr 98 +ld+++++L +gG+ tr|M1XNP7|M1XNP7_NATM8 120 SLDELARVLDDGGV 133 *************7 PP >> tr|M1XL59|M1XL59_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.9 0.0 2e-10 2.5e-08 1 91 [. 49 138 .. 49 142 .. 0.77 Alignments for each domain: == domain 1 score: 31.9 bits; conditional E-value: 2e-10 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldgg...ssfDvvvasnvlhhl.kdi 82 Le+GcG+G+ l++l+e+ + e + g+Di+ a e +e + + ++ + +d+l +g + +Dvv+a ++l+h+ +d tr|M1XL59|M1XL59_NATM8 49 LELGCGSGRHLEHLREQ--GYESLaGIDINDTAFEVMAEAYPRLAE-TGSFTTGALEDVL---PGvpdDEYDVVYAVETLQHVhPDE 129 8****************..888888*********776666666664.4455555555554...444559**************7666 PP Methyltransf_12 83 realdniyk 91 + +++ +++ tr|M1XL59|M1XL59_NATM8 130 AWVFEAVAR 138 666666655 PP >> tr|M1XKD3|M1XKD3_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 30.1 0.0 7.2e-10 8.9e-08 1 99 [] 45 134 .. 45 134 .. 0.77 Alignments for each domain: == domain 1 score: 30.1 bits; conditional E-value: 7.2e-10 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvas.nvlhhlkdir.ea 85 L++GcG+G +r l++ + +gvDis++ ++ a+e + + v+ e +l dg fD+++a v+h+ + ++ e+ tr|M1XKD3|M1XKD3_NATM8 45 LDVGCGDG--ARTLANL--PPGSVGVDISRRGLDLAAETTPVARL-----VHGEMSELPFADG--VFDAITAYhAVFHVPRGRHpEV 120 8*******..6667677..669***********777777777665.....4444444444444..9*****99677777755556** PP Methyltransf_12 86 ldniyklLkpgGrl 99 ++++++L+pgGrl tr|M1XKD3|M1XKD3_NATM8 121 YAEFARVLRPGGRL 134 ************97 PP >> tr|M1XQ74|M1XQ74_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.3 0.0 2.3e-08 2.9e-06 1 91 [. 49 138 .. 49 142 .. 0.84 Alignments for each domain: == domain 1 score: 25.3 bits; conditional E-value: 2.3e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl.kdireal 86 Le+GcG+G+ l++l e+ ++ g+D++ ++ + +e ++ + + + + + + fD+v++ ++l+h+ +d++ ++ tr|M1XQ74|M1XQ74_NATM8 49 LELGCGSGRHLAHLHEH-GFERLSGIDLNGDSFDVMAETYPGLAS-AGTFHHGAIEAVVEGFEDGRFDAVYSVETLQHIhPDVEWVF 133 8****************.666677*********888888888774.5566666666666666668*******************999 PP Methyltransf_12 87 dniyk 91 ++i++ tr|M1XQ74|M1XQ74_NATM8 134 EEIAR 138 99987 PP >> tr|M1XTN7|M1XTN7_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.9 0.0 6.3e-08 7.8e-06 1 94 [. 36 116 .. 36 120 .. 0.85 2 ? -1.9 0.0 7.2 8.9e+02 19 52 .. 145 179 .. 130 189 .. 0.67 Alignments for each domain: == domain 1 score: 23.9 bits; conditional E-value: 6.3e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 +++GcG G+l+r+l+e+ + e++g+D +++ + ++l v+ +a l dg s+D+v + +l +l+d+ +a++ tr|M1XTN7|M1XTN7_NATM8 36 VDVGCGEGALTRVLREE-CPGEVVGCDRDARLL----AELEG------PTVRGDAYRLPFADG--SVDLVACQALLINLPDPGRAVR 109 69***************.99*************....33333......457777777777776..9********************* PP Methyltransf_12 88 niyklLk 94 +++++ + tr|M1XTN7|M1XTN7_NATM8 110 EFARVAA 116 9999876 PP == domain 2 score: -1.9 bits; conditional E-value: 7.2 Methyltransf_12 19 pdieyt.gvDispsaiedakeklakrennnnnnvn 52 + +y+ gvD + + +da+ +++ + n+ + tr|M1XTN7|M1XTN7_NATM8 145 ARERYLeGVDTDVALGADAADVFRAAGLSNVRTRR 179 45566677777777777777777777666655555 PP >> tr|M1Y1T3|M1Y1T3_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 23.5 0.0 8.5e-08 1e-05 1 98 [. 165 262 .. 165 263 .. 0.87 Alignments for each domain: == domain 1 score: 23.5 bits; conditional E-value: 8.5e-08 Methyltransf_12 1 LeiGcGtGsllrallekl...pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdire 84 L++G+G G + l ++l + +ey +v++s++a ++ l ++ + + v+ e+ +++ +g +D+vv nvl+ l+ + tr|M1Y1T3|M1Y1T3_NATM8 165 LDVGAGAGGPALGLYDYLpddSLVEYDAVEPSAAAD-VFETMLDPTRPGFDATVHRETAEAFAPEG--EYDLVVFGNVLSELEAPVP 248 8********999999999877889999999999999.77777777777787788888777776655..9****************** PP Methyltransf_12 85 aldniyklLkpgGr 98 ++++ ++L+p+G tr|M1Y1T3|M1Y1T3_NATM8 249 VVERYLEALAPDGT 262 *************7 PP >> tr|M1XRL7|M1XRL7_NATM8 Probable S-adenosylmethionine-dependent methyltransferase PrmC OS=Natronomonas moolapensis (s # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.6 0.0 3.3e-07 4.1e-05 1 71 [. 36 95 .. 36 99 .. 0.79 2 ? 0.2 0.0 1.6 2e+02 81 98 .. 126 143 .. 113 144 .. 0.86 Alignments for each domain: == domain 1 score: 21.6 bits; conditional E-value: 3.3e-07 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvv 71 Le+G G+G ++++++++ +++++g+Di+p+a+ ++++ a +e+ + + + + d sfD+vv tr|M1XRL7|M1XRL7_NATM8 36 LEVGVGSGYVADRIAAE-TPADVVGCDINPEAC--RRTRSAGIEAVRSDLTHAFLAD--------SFDAVV 95 8****************.9**************..7777777775444444444444........788877 PP == domain 2 score: 0.2 bits; conditional E-value: 1.6 Methyltransf_12 81 direaldniyklLkpgGr 98 ir +l+ + ++L+p Gr tr|M1XRL7|M1XRL7_NATM8 126 VIRPFLSDLGRVLRPSGR 143 6889999********997 PP >> tr|M1XTL7|M1XTL7_NATM8 tRNA (Adenine-N(1))-methyltransferase TrmI OS=Natronomonas moolapensis (strain DSM 18674 / JC # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.0 0.1 5.1e-07 6.3e-05 1 99 [] 87 178 .. 87 178 .. 0.84 Alignments for each domain: == domain 1 score: 21.0 bits; conditional E-value: 5.1e-07 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirea 85 L+ G+GtG l+++l + ++e+t ++ ++++ + a+e +a + ++++++++ dl d+ D+v l l d +++ tr|M1XTL7|M1XTL7_NATM8 87 LDAGTGTGVLAAYLGRL--GVEVTTYERDAEFAAVARENMATAG--VAEQIDVRTGDLTDE-----LDAVEGGYDLLTLdtGDAAAV 164 89***************..**************99999999988..688999999999875.....5555544444444449999** PP Methyltransf_12 86 ldniyklLkpgGrl 99 ++++ +lL+pgG l tr|M1XTL7|M1XTL7_NATM8 165 VERADELLAPGGFL 178 ***********986 PP >> tr|M1Y1P2|M1Y1P2_NATM8 Probable S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.9 0.0 1.1e-06 0.00014 2 99 .] 42 131 .. 41 131 .. 0.78 Alignments for each domain: == domain 1 score: 19.9 bits; conditional E-value: 1.1e-06 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnleald.lldldggssfDvvvasnvlhhlkdireald 87 ++G+GtG +++ ++++ ++++vD+++++ e+ +++ +n + +d l +d ++ D+++ + h + ea+ tr|M1Y1P2|M1Y1P2_NATM8 42 DLGSGTGFYTDLVARH--AGTVHAVDVQAAMH----ERYVEKGLPDNVQTVTAPIDgLPFED--GALDAAFTTMTYHEF-SGPEAIG 119 89**************..**************....55555554444444444444033333..49************8.566899* PP Methyltransf_12 88 niyklLkpgGrl 99 +i+++L+pgGr+ tr|M1Y1P2|M1Y1P2_NATM8 120 EIARVLAPGGRV 131 **********85 PP >> tr|M1XS10|M1XS10_NATM8 Probable rRNA methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JCM 14361 / 8 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.6 0.0 2.8e-06 0.00035 1 58 [. 59 113 .. 59 136 .. 0.74 Alignments for each domain: == domain 1 score: 18.6 bits; conditional E-value: 2.8e-06 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdl 58 L++GcGtG l+ + + + e++ gvDi+p+ + a+e ++ ++ + v + d+ tr|M1XS10|M1XS10_NATM8 59 LDLGCGTGMLALGAALR--GPELVvGVDIDPAPLSTARENERRVGA--MTDVSWVRGDV 113 8*******998888777..777777*********777776666553..44444444444 PP >> tr|M1XZU1|M1XZU1_NATM8 Protein-L-isoaspartate O-methyltransferase OS=Natronomonas moolapensis (strain DSM 18674 / JC # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.3 0.0 7.4e-06 0.00092 1 45 [. 81 125 .. 81 151 .. 0.88 Alignments for each domain: == domain 1 score: 17.3 bits; conditional E-value: 7.4e-06 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakren 45 L +G G+G ++++l+e + +++++g+Di ++ + da+ l++ + tr|M1XZU1|M1XZU1_NATM8 81 LVVGVGVGYTAAVLAELTDEASVHGIDIARRLVYDARSNLSAAGY 125 569******************************999999998764 PP >> tr|M1XNL1|M1XNL1_NATM8 Homolog to S-adenosylmethionine-dependent methyltransferase OS=Natronomonas moolapensis (stra # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.2 0.0 1.6e-05 0.0019 1 98 [. 46 164 .. 46 165 .. 0.94 Alignments for each domain: == domain 1 score: 16.2 bits; conditional E-value: 1.6e-05 Methyltransf_12 1 LeiGcGtGsllrallekl....pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg................... 64 Le+G+G G++ ++lle ++y+++D++++++e + l+++ +++ + v ++++g+ tr|M1XNL1|M1XNL1_NATM8 46 LEVGAGIGTMPARLLEWDvlppGAVRYVALDVDADSVEFVEPYLRSWAADRQASVSGGGPIEIERAGRrveleaiaaeavayaeqaa 132 8***************99999889*********************************99999999999******************* PP Methyltransf_12 65 ssfDvvvasnvlhhlkdirealdniyklLkpgGr 98 + fD+vv + +l +l + l+ + +L+pgG tr|M1XNL1|M1XNL1_NATM8 133 GRFDAVVGAALLDVL--GVDGLETLLGALAPGGL 164 **************9..56899999999999996 PP >> tr|M1XL04|M1XL04_NATM8 Protein-glutamate O-methyltransferase CheR OS=Natronomonas moolapensis (strain DSM 18674 / JC # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 12.2 0.0 0.00029 0.036 36 97 .. 177 240 .. 106 242 .. 0.70 Alignments for each domain: == domain 1 score: 12.2 bits; conditional E-value: 0.00029 Methyltransf_12 36 akeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirealdniyklLkpgG 97 a ++ + +++ v +e+ dl++ ++ +D+v++ n+l ++ + +++ + +++ +G tr|M1XL04|M1XL04_NATM8 177 ADARSFAVRDRVKRMVSFEQHDLISGTPKRGYDLVLCRNLLIYIdsSYKTPIFETLTAAVEADG 240 33333344445555666777777777777**************988666666666666666666 PP >> tr|M1Y5Q2|M1Y5Q2_NATM8 Probable cobalt-precorrin-6B C(15)-methyltransferase (decarboxylating) OS=Natronomonas moolap # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 13.5 0.0 0.00011 0.014 1 79 [. 36 132 .. 36 142 .. 0.82 Alignments for each domain: == domain 1 score: 13.5 bits; conditional E-value: 0.00011 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...................ssfD 68 +e+G+ tG+++ + ++ ++t+++ p+ +e++++ la+++ + ++ ++ ea ++l +d +D tr|M1Y5Q2|M1Y5Q2_NATM8 36 VEVGSCTGAVTIEAARL--AGRVTAIERKPERLEATRKNLAANGIEGVELIEGEAPEALPDDADalflggsrnyadvldhaaeTGVD 120 59***************..***********************************999886666678888888777777777776777 PP Methyltransf_12 69 vvvas.nvlhhl 79 vv++ + l++ tr|M1Y5Q2|M1Y5Q2_NATM8 121 RVVMNvSRLEVA 132 777765556555 PP >> tr|M1XRN3|M1XRN3_NATM8 Probable ribosomal RNA small subunit methyltransferase A OS=Natronomonas moolapensis (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.6 0.0 0.00021 0.026 1 47 [. 47 91 .. 47 119 .. 0.77 Alignments for each domain: == domain 1 score: 12.6 bits; conditional E-value: 0.00021 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennn 47 +eiG+GtG l+++ll ++t+v+ +p+ + +e++a++++ tr|M1XRN3|M1XRN3_NATM8 47 VEIGGGTGGLTDRLLSV--ADRVTVVERDPDLAAFLREEFAAEIAGG 91 69***************..7778888888877777899988887654 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (99 nodes) Target sequences: 2723 (809592 residues searched) Passed MSV filter: 121 (0.0444363); expected 54.5 (0.02) Passed bias filter: 113 (0.0414983); expected 54.5 (0.02) Passed Vit filter: 34 (0.0124862); expected 2.7 (0.001) Passed Fwd filter: 22 (0.00807932); expected 0.0 (1e-05) Initial search space (Z): 2723 [actual number of targets] Domain search space (domZ): 22 [number of targets reported over threshold] # CPU time: 0.03u 0.00s 00:00:00.03 Elapsed: 00:00:00.02 # Mc/sec: 4007.48 // [ok]