# hmmsearch :: search profile(s) against a sequence database # HMMER 3.1b2 (February 2015); http://hmmer.org/ # Copyright (C) 2015 Howard Hughes Medical Institute. # Freely distributed under the GNU General Public License (GPLv3). # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - # query HMM file: pfam_list/Methyltransf_12.hmm.txt # target sequence database: proteomes/Pseudomonas_aeruginosa.fasta # - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: Methyltransf_12 [M=99] Accession: PF08242.11 Description: Methyltransferase domain Scores for complete sequences (score includes all domains): --- full sequence --- --- best 1 domain --- -#dom- E-value score bias E-value score bias exp N Sequence Description ------- ------ ----- ------- ------ ----- ---- -- -------- ----------- 1.7e-17 62.3 0.0 2.6e-17 61.7 0.0 1.3 1 sp|Q9HZ63|UBIG_PSEAE Ubiquinone biosynthesis O-methyltrans 1.4e-14 52.9 0.0 4e-14 51.5 0.0 1.7 1 tr|Q9HY94|Q9HY94_PSEAE Uncharacterized protein OS=Pseudomona 2.6e-14 52.1 0.0 4.4e-14 51.4 0.0 1.4 1 tr|Q9I4P1|Q9I4P1_PSEAE Uncharacterized protein OS=Pseudomona 2.8e-14 52.0 0.1 7.1e-14 50.7 0.0 1.8 1 tr|Q9I5Y9|Q9I5Y9_PSEAE Probable transcriptional regulator OS 6.4e-13 47.6 0.0 1.1e-12 46.9 0.0 1.4 1 tr|Q9HV18|Q9HV18_PSEAE tRNA 5-carboxymethoxyuridine methyltr 8e-13 47.3 0.0 1.4e-12 46.6 0.0 1.4 1 sp|Q9HUC0|UBIE_PSEAE Ubiquinone/menaquinone biosynthesis C 1.3e-12 46.7 0.0 2.5e-12 45.7 0.0 1.5 1 tr|Q9I615|Q9I615_PSEAE Malonyl-[acyl-carrier protein] O-meth 1.6e-12 46.4 0.0 2.6e-12 45.7 0.0 1.3 1 tr|Q9HV09|Q9HV09_PSEAE Uncharacterized protein OS=Pseudomona 1.3e-11 43.5 0.0 2.9e-11 42.3 0.0 1.6 1 tr|Q9HT28|Q9HT28_PSEAE Uncharacterized protein OS=Pseudomona 3.7e-11 42.0 0.0 6.6e-11 41.2 0.0 1.4 1 tr|Q9HTB1|Q9HTB1_PSEAE Uncharacterized protein OS=Pseudomona 6.5e-11 41.2 0.0 1.4e-10 40.1 0.0 1.6 1 tr|Q9I5E0|Q9I5E0_PSEAE Phospholipid methyltransferase OS=Pse 1.2e-10 40.3 0.0 1.7e-10 39.8 0.0 1.2 1 tr|Q9HV06|Q9HV06_PSEAE Uncharacterized protein OS=Pseudomona 5e-10 38.3 0.0 3.4e-09 35.7 0.0 2.4 2 tr|Q9HWG4|Q9HWG4_PSEAE Pyochelin synthetase OS=Pseudomonas a 8.1e-10 37.7 0.0 1.3e-09 37.0 0.0 1.3 1 tr|Q9I281|Q9I281_PSEAE Uncharacterized protein OS=Pseudomona 1.5e-09 36.8 0.1 2.9e-09 35.9 0.1 1.4 1 tr|Q9I6A6|Q9I6A6_PSEAE Uncharacterized protein OS=Pseudomona 4.2e-09 35.4 0.0 9.4e-09 34.3 0.0 1.6 1 sp|Q9I5G3|CMOA_PSEAE Carboxy-S-adenosyl-L-methionine synth 5.9e-09 34.9 0.1 1.3e-08 33.8 0.0 1.7 1 tr|Q9I0F9|Q9I0F9_PSEAE Uncharacterized protein OS=Pseudomona 9.5e-09 34.3 0.0 2e-08 33.2 0.0 1.6 1 tr|Q9I4C2|Q9I4C2_PSEAE Uncharacterized protein OS=Pseudomona 1.1e-08 34.0 0.0 1.7e-08 33.5 0.0 1.3 1 tr|G3XCZ7|G3XCZ7_PSEAE Uncharacterized protein OS=Pseudomona 4.5e-08 32.1 0.0 9.6e-08 31.0 0.0 1.5 1 tr|Q9I1T6|Q9I1T6_PSEAE Uncharacterized protein OS=Pseudomona 9.4e-08 31.1 0.0 2.7e-07 29.6 0.0 1.8 1 sp|Q9I0S1|TAM_PSEAE Trans-aconitate 2-methyltransferase O 1.3e-07 30.6 0.0 1.4e-05 24.1 0.0 2.3 2 sp|O87131|CHER1_PSEAE Chemotaxis protein methyltransferase 1.8e-07 30.2 0.0 3e-07 29.4 0.0 1.4 1 tr|Q9I128|Q9I128_PSEAE Uncharacterized protein OS=Pseudomona 2e-07 30.0 0.0 3e-07 29.5 0.0 1.3 1 tr|Q9I227|Q9I227_PSEAE Uncharacterized protein OS=Pseudomona 2.4e-07 29.8 0.0 4.4e-07 28.9 0.0 1.5 1 tr|Q9HWK3|Q9HWK3_PSEAE Uncharacterized protein OS=Pseudomona 3.1e-07 29.4 0.0 5.5e-07 28.6 0.0 1.4 1 tr|Q9HW23|Q9HW23_PSEAE Uncharacterized protein OS=Pseudomona 4.6e-07 28.9 0.0 7.2e-07 28.2 0.0 1.3 1 tr|Q9HTB3|Q9HTB3_PSEAE Uncharacterized protein OS=Pseudomona 1.3e-06 27.4 0.0 2.5e-06 26.5 0.0 1.5 1 tr|Q9I2I3|Q9I2I3_PSEAE Uncharacterized protein OS=Pseudomona 1.3e-06 27.4 0.0 2.3e-06 26.6 0.0 1.4 1 tr|Q9I0I8|Q9I0I8_PSEAE Uncharacterized protein OS=Pseudomona 2e-06 26.8 0.0 3.5e-06 26.0 0.0 1.4 1 tr|Q9I5X8|Q9I5X8_PSEAE Uncharacterized protein OS=Pseudomona 3.9e-06 25.9 0.0 6.9e-06 25.1 0.0 1.4 1 sp|Q9I5G4|CMOB_PSEAE tRNA U34 carboxymethyltransferase OS= 4.6e-06 25.7 0.0 1e-05 24.6 0.0 1.6 1 tr|Q9I4H6|Q9I4H6_PSEAE rRNA methyltransferase OS=Pseudomonas 1.6e-05 23.9 0.0 8.1e-05 21.6 0.0 2.0 1 tr|G3XCT5|G3XCT5_PSEAE Methyltransferase PilK OS=Pseudomonas 1.8e-05 23.7 0.0 3.7e-05 22.8 0.0 1.6 1 sp|Q9HUW3|PRMA_PSEAE Ribosomal protein L11 methyltransfera 2.4e-05 23.4 0.0 3.5e-05 22.8 0.0 1.3 1 tr|Q9I279|Q9I279_PSEAE Uncharacterized protein OS=Pseudomona 2.5e-05 23.3 0.0 6.5e-05 22.0 0.0 1.8 1 sp|Q9HVH4|RLMG_PSEAE Ribosomal RNA large subunit methyltra 5.2e-05 22.3 0.0 0.00026 20.0 0.0 2.2 1 sp|Q9HVG4|RSMC_PSEAE Ribosomal RNA small subunit methyltra 6.8e-05 21.9 0.0 0.00013 21.0 0.0 1.5 1 tr|Q9HXD0|Q9HXD0_PSEAE Uncharacterized protein OS=Pseudomona 0.00015 20.8 0.0 0.00052 19.1 0.0 2.0 1 sp|Q9HXT5|WSPC_PSEAE Probable biofilm formation methyltran 0.00023 20.2 0.0 0.00057 18.9 0.0 1.7 1 sp|Q9HV34|SPEE2_PSEAE Polyamine aminopropyltransferase 2 OS 0.00027 20.0 0.0 0.0038 16.3 0.0 2.4 2 sp|Q9I6V7|CHER2_PSEAE Chemotaxis protein methyltransferase 0.00065 18.7 0.0 0.0032 16.5 0.0 1.9 2 sp|Q9HVC8|PRMC_PSEAE Release factor glutamine methyltransf 0.0013 17.8 0.0 0.0023 17.0 0.0 1.4 1 tr|Q9HYR0|Q9HYR0_PSEAE Uncharacterized protein OS=Pseudomona 0.0018 17.3 0.0 0.0042 16.1 0.0 1.6 1 sp|Q9HV78|TRMA_PSEAE tRNA/tmRNA (uracil-C(5))-methyltransf 0.0027 16.8 0.0 0.0057 15.7 0.0 1.6 1 sp|Q9HXG4|RLMF_PSEAE Ribosomal RNA large subunit methyltra 0.0042 16.1 0.0 0.016 14.3 0.0 2.0 1 tr|G3XCV2|G3XCV2_PSEAE Dihydroaeruginoic acid synthetase OS= ------ inclusion threshold ------ 0.011 14.8 0.0 0.022 13.8 0.0 1.5 1 tr|Q9HU01|Q9HU01_PSEAE Probable 3-hydroxyacyl-CoA dehydrogen 0.015 14.4 0.0 0.039 13.1 0.0 1.8 1 sp|Q9X6R0|SPEE1_PSEAE Polyamine aminopropyltransferase 1 OS 0.02 13.9 0.0 0.097 11.8 0.0 1.9 2 sp|Q9I347|PRMB_PSEAE 50S ribosomal protein L3 glutamine me 0.038 13.1 0.0 0.061 12.4 0.0 1.4 1 tr|Q9I3U2|Q9I3U2_PSEAE Uncharacterized protein OS=Pseudomona Domain annotation for each sequence (and alignments): >> sp|Q9HZ63|UBIG_PSEAE Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 61.7 0.0 2.3e-19 2.6e-17 1 99 [] 52 146 .. 52 146 .. 0.80 Alignments for each domain: == domain 1 score: 61.7 bits; conditional E-value: 2.3e-19 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..ssfDvvvasnvlhhlkdireald 87 L+iGcG G l++a++++ ++++tg+D ++ ++ a +l++ e v+++++ +++ +++ ++fDvv++++ l+h++d++++++ sp|Q9HZ63|UBIG_PSEAE 52 LDIGCGGGILSEAMAQR--GASVTGIDMGEAPLAVA--RLHQLESGV--AVDYRQITAEQMAEEmpGQFDVVTCLEMLEHVPDPASVIR 134 8****************..**************444..444444333..444444443333333446********************** PP Methyltransf_12 88 niyklLkpgGrl 99 +++l+kpgG++ sp|Q9HZ63|UBIG_PSEAE 135 ACHRLVKPGGQV 146 **********95 PP >> tr|Q9HY94|Q9HY94_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 51.5 0.0 3.6e-16 4e-14 1 98 [. 181 275 .. 181 276 .. 0.89 Alignments for each domain: == domain 1 score: 51.5 bits; conditional E-value: 3.6e-16 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L++GcG+G + ++++++p+++++g+D+++ +ie+a++ + + ++v++e+ d + l+g+ +fD v+ + v+h d++++++ tr|Q9HY94|Q9HY94_PSEAE 181 LDFGCGSGLAAIMMAKAFPEAQVYGCDFHAPSIERARANAEAAG--VGDRVRFEVSDSDALAGK-KFDFVTTFVVIHDATDPQQMMK 264 8********************************66666666666..677889998887777776.********************** PP Methyltransf_12 88 niyklLkpgGr 98 +++ +++G tr|Q9HY94|Q9HY94_PSEAE 265 DLRESTADDGT 275 ****9999995 PP >> tr|Q9I4P1|Q9I4P1_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 51.4 0.0 4e-16 4.4e-14 1 99 [] 72 174 .. 72 174 .. 0.88 Alignments for each domain: == domain 1 score: 51.4 bits; conditional E-value: 4e-16 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..ssfDvvvasnvlhhl..kdir 83 L+iGcG G+ l+e+ p+++y+g+D+s++ +e+a + ++r+ ++ + + a+d+ + +D+ ++s++l +l d + tr|Q9I4P1|Q9I4P1_PSEAE 72 LDIGCGIGRWGWLLAEEAPQADYLGIDFSAALVEKACDEARQRGYERLLFQRMSATDIRPAELAlsPPYDLLLVSGLLIYLndSDCQ 158 8********************************9999998888887777777777765433333669**************999*** PP Methyltransf_12 84 ealdniyklLkpgGrl 99 e+l+++ +l++pgGr+ tr|Q9I4P1|Q9I4P1_PSEAE 159 ELLRQALQLCAPGGRI 174 **************96 PP >> tr|Q9I5Y9|Q9I5Y9_PSEAE Probable transcriptional regulator OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 50.7 0.0 6.4e-16 7.1e-14 1 99 [] 170 262 .. 170 262 .. 0.88 Alignments for each domain: == domain 1 score: 50.7 bits; conditional E-value: 6.4e-16 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 Le+G G+G +l +l+++ ++t++D s++++e a+++ ++++ n v+le d+l+++ + D vv++ vlhh++ ++eal+ tr|Q9I5Y9|Q9I5Y9_PSEAE 170 LEVGPGDGGFLPELARR--FRQVTALDNSAAMLELARQRCKEEGLGN---VRLELADALQDAA-EPADCVVLNMVLHHFAAPAEALK 250 8****************..**************99999999988644...5555555554433.5********************** PP Methyltransf_12 88 niyklLkpgGrl 99 ++++l+ pgG l tr|Q9I5Y9|Q9I5Y9_PSEAE 251 QLARLVHPGGSL 262 **********76 PP >> tr|Q9HV18|Q9HV18_PSEAE tRNA 5-carboxymethoxyuridine methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.9 0.0 9.9e-15 1.1e-12 1 99 [] 46 140 .. 46 140 .. 0.91 Alignments for each domain: == domain 1 score: 46.9 bits; conditional E-value: 9.9e-15 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L+iG+G G+++ l+++ + ++t ++ + +++ a++++a+ ++ +++++ ++ll + + +D+v+++ vl++l++++++l tr|Q9HV18|Q9HV18_PSEAE 46 LDIGAGLGHMSLWLAAR--GHRVTLAEPAQPMLDGARQRFAEAGQ-AAEFIQAPWQELLGQLT-EPYDLVLCHAVLEWLAEPHAILP 128 8****************..**********************9995.66777777777665555.5********************** PP Methyltransf_12 88 niyklLkpgGrl 99 +++l++pgG+l tr|Q9HV18|Q9HV18_PSEAE 129 VLHQLCAPGGWL 140 **********97 PP >> sp|Q9HUC0|UBIE_PSEAE Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE OS=Pseudomonas aeruginosa (strain # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 46.6 0.0 1.2e-14 1.4e-12 1 99 [] 73 171 .. 73 171 .. 0.90 Alignments for each domain: == domain 1 score: 46.6 bits; conditional E-value: 1.2e-14 Methyltransf_12 1 LeiGcGtGsllrallekl.pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhlkdireald 87 L+i +GtG+l+r + + p+ e++ Di++s+++ + kl +++ nv + + d+++l+ + ++fD v++++ l ++ +++ea++ sp|Q9HUC0|UBIE_PSEAE 73 LDIAGGTGDLTRQFSRLVgPTGEVVLADINASMLKVGRDKLLDKGV--SGNVSFVQADAEKLPFPdNHFDCVTIAFGLRNVTHKDEAIR 159 8***************9999**************999999998885..4477777777666666678********************** PP Methyltransf_12 88 niyklLkpgGrl 99 ++ ++LkpgGrl sp|Q9HUC0|UBIE_PSEAE 160 SMLRVLKPGGRL 171 **********97 PP >> tr|Q9I615|Q9I615_PSEAE Malonyl-[acyl-carrier protein] O-methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 156 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.7 0.0 2.2e-14 2.5e-12 1 99 [] 62 153 .. 62 153 .. 0.90 Alignments for each domain: == domain 1 score: 45.7 bits; conditional E-value: 2.2e-14 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 +++GcGtG ++ral++++ +e ++vDi + ++ +a+ ++ +++ +a+ l +dg s D+ ++s ++++++d+ ++l+ tr|Q9I615|Q9I615_PSEAE 62 VDLGCGTGYFSRALERRFGAAEGLAVDIAEGMLR-----HARARGGASHFIGGDAERLPLRDG--SCDLLFSSLAIQWCADLPAVLA 141 59*******************************4.....444455555688888888888887..********************** PP Methyltransf_12 88 niyklLkpgGrl 99 +++++L+pgG+l tr|Q9I615|Q9I615_PSEAE 142 EARRVLRPGGVL 153 **********97 PP >> tr|Q9HV09|Q9HV09_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 45.7 0.0 2.3e-14 2.6e-12 2 99 .] 63 158 .. 62 158 .. 0.92 Alignments for each domain: == domain 1 score: 45.7 bits; conditional E-value: 2.3e-14 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvas.nvlhhlkdireald 87 +Gc++G+ + l + ++ +g+D s++++ + +++la+r++++ +v+ +a +l + g +fD+ ++ +vl++++di+++++ tr|Q9HV09|Q9HV09_PSEAE 63 QVGCNNGREVLSLYAF-GVARAVGIDQSAAFL-AQARQLAERSPHQPRFVEANAYELPAELNG-QFDLLLITiGVLNWMPDIARFFA 146 69*****999999777.8999***********.9999999****************9988887.****88777************** PP Methyltransf_12 88 niyklLkpgGrl 99 ++ lLkpgG+l tr|Q9HV09|Q9HV09_PSEAE 147 SVSGLLKPGGQL 158 **********97 PP >> tr|Q9HT28|Q9HT28_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 42.3 0.0 2.6e-13 2.9e-11 1 98 [. 164 260 .. 164 261 .. 0.91 Alignments for each domain: == domain 1 score: 42.3 bits; conditional E-value: 2.6e-13 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl..kdirea 85 L++GcG G l+r +++ ++e+tg+ +s+++++ +e+ ++++ ++ ++l + +l +dg fD vv+ + ++h+ +++ + tr|Q9HT28|Q9HT28_PSEAE 164 LDVGCGWGGLARLAARE-FGVEVTGITLSKEQLALGRERVKAEGLEDRVTLKLLDYRDLPRDG--RFDKVVSVGMFEHVghANLGLY 247 8***********99999.8*************************9887777777777666665..9*************9999999* PP Methyltransf_12 86 ldniyklLkpgGr 98 ++++y++++pgG tr|Q9HT28|Q9HT28_PSEAE 248 FQQLYEAVRPGGL 260 ************7 PP >> tr|Q9HTB1|Q9HTB1_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 41.2 0.0 5.9e-13 6.6e-11 1 97 [. 64 156 .. 64 158 .. 0.91 Alignments for each domain: == domain 1 score: 41.2 bits; conditional E-value: 5.9e-13 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L++GcG+G +++ ++++ +++++ Di+++ i++++e+la+ ++ +++ ++ l d + vv+ +v++h++d+r++l+ tr|Q9HTB1|Q9HTB1_PSEAE 64 LDVGCGDGGNVHFCAMR--GARIIIADIDAEKIARTRERLADTPARELECLVSDCDPLPLADA--TATRVVSTEVIEHVDDPRQFLA 146 8****************..*************************9998888888777665544..9999****************** PP Methyltransf_12 88 niyklLkpgG 97 ++ ++ pg+ tr|Q9HTB1|Q9HTB1_PSEAE 147 ELVRVGQPGA 156 ****999987 PP >> tr|Q9I5E0|Q9I5E0_PSEAE Phospholipid methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 40.1 0.0 1.3e-12 1.4e-10 1 99 [] 51 145 .. 51 145 .. 0.89 Alignments for each domain: == domain 1 score: 40.1 bits; conditional E-value: 1.3e-12 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 LeiG GtG +l ++ + + ++gvD+ +++ + a+e+ a+++ ++ v le ++ ++ +sfD++v+ ++l+ ++ + al tr|Q9I5E0|Q9I5E0_PSEAE 51 LEIGLGTGLNLGFYDAA-KVSAIVGVDPAAQMQALARERAAQIGI-PVEMVALELGEIRAEA--ESFDTIVCTFTLCSIAAPLPALG 133 8**********999999.899999*********999999999986.6677777766665444..5********************** PP Methyltransf_12 88 niyklLkpgGrl 99 +++++Lk gG l tr|Q9I5E0|Q9I5E0_PSEAE 134 EMRRVLKRGGEL 145 **********76 PP >> tr|Q9HV06|Q9HV06_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 39.8 0.0 1.6e-12 1.7e-10 2 99 .] 46 142 .. 45 142 .. 0.92 Alignments for each domain: == domain 1 score: 39.8 bits; conditional E-value: 1.6e-12 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhl...kdire 84 ++G+G ++l++ ll++ ++t++D+s +a+ a+++l +r++ +v++ a d+ d + +++Dv + v+h l + +r+ tr|Q9HV06|Q9HV06_PSEAE 46 DVGGGASTLVDGLLAE-GFGDLTVLDLSDAALRVARNRLGARGE----EVRWIAGDITGVDLPeATYDVWHDRAVFHFLttaEARRA 127 9***************.*************************96....77888888777776678****************88888* PP Methyltransf_12 85 aldniyklLkpgGrl 99 +++++ k+++ gG++ tr|Q9HV06|Q9HV06_PSEAE 128 YVRQVMKAVRHGGHV 142 *************85 PP >> tr|Q9HWG4|Q9HWG4_PSEAE Pyochelin synthetase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? -1.1 0.0 8.8 9.8e+02 37 99 .] 974 1054 .. 960 1054 .. 0.70 2 ! 35.7 0.0 3.1e-11 3.4e-09 1 99 [] 1162 1267 .. 1162 1267 .. 0.88 Alignments for each domain: == domain 1 score: -1.1 bits; conditional E-value: 8.8 Methyltransf_12 37 keklakrennnnnnvnlealdlldldgg..................ssfDvvvasnvlhhlkdirealdniyklLkpgGrl 99 +++ a+ ++++ + a ++ ld D++++++ l + ++++l++ + L gG l tr|Q9HWG4|Q9HWG4_PSEAE 974 RQRAAQALRRDWGSEEGIAAAVAALDRAclaslaawlagsglfasaTPLDLATLCQRLGIAEARQRLLRHWLRQLEEGGYL 1054 555555555555555555555555555566666666666666667778999999999999999999999999999999976 PP == domain 2 score: 35.7 bits; conditional E-value: 3.1e-11 Methyltransf_12 1 LeiGcGtGsllrallekl.......pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...ssfDvvvasnv 75 Le+G+Gt++ +r + ++l +++y+++D+s+ ++++a+e++a++ ++ +++ + ld+g +s+D+ ++s++ tr|Q9HWG4|Q9HWG4_PSEAE 1162 LELGAGTAAASRTVIARLaplvqrgAEVDYLFTDVSSYFLAAARERFADQPWVRFGRFDMNGDL---LDQGvapHSVDILLSSGA 1243 8**********************999***********************996555555555443...4444567*********** PP Methyltransf_12 76 lhhlkdirealdniyklLkpgGrl 99 l++ d+ ++l+ +++lL+ +++l tr|Q9HWG4|Q9HWG4_PSEAE 1244 LNNALDTPALLAGLRELLSADAWL 1267 ******************999876 PP >> tr|Q9I281|Q9I281_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 37.0 0.0 1.2e-11 1.3e-09 1 96 [. 45 141 .. 45 144 .. 0.94 Alignments for each domain: == domain 1 score: 37.0 bits; conditional E-value: 1.2e-11 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl...kdire 84 L +GcG G l++l+ p++++++ D+s+++++ a+++ a+ + ++++l + d++ l++ D+++++ vlh l + +r+ tr|Q9I281|Q9I281_PSEAE 45 LSVGCGAGGELAELAGLRPGWRFVAADLSADMLALARQRCARLGL--LERIELHCGDVAGLPPAPPCDAALVLLVLHFLrgdQAKRR 129 689******************************999999999997..66************999*****************88888* PP Methyltransf_12 85 aldniyklLkpg 96 +l+ +++ L+p tr|Q9I281|Q9I281_PSEAE 130 FLEAVAERLAPA 141 *********996 PP >> tr|Q9I6A6|Q9I6A6_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 35.9 0.1 2.6e-11 2.9e-09 1 91 [. 19 101 .. 19 104 .. 0.81 Alignments for each domain: == domain 1 score: 35.9 bits; conditional E-value: 2.6e-11 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...ssfDvvvasnvlhhlkdire 84 L++GcG+G+ll+ l+++ ++++ +g++i+p+ i a+ ++n vn+ ++dl++ g+ +sfDvvv+ ++l+++ +++ tr|Q9I6A6|Q9I6A6_PSEAE 19 LDLGCGDGELLAWLRDH-KQVSGYGLEIDPDNI-------ARCIENG---VNVIEQDLDKGLGNfasDSFDVVVMTQALQAVHYPDK 94 8****************.9**************.......4455434...444444444444446679******************* PP Methyltransf_12 85 aldniyk 91 +l+++ + tr|Q9I6A6|Q9I6A6_PSEAE 95 ILEEMLR 101 **99876 PP >> sp|Q9I5G3|CMOA_PSEAE Carboxy-S-adenosyl-L-methionine synthase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 226 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 34.3 0.0 8.4e-11 9.4e-09 2 99 .] 62 164 .. 61 164 .. 0.88 Alignments for each domain: == domain 1 score: 34.3 bits; conditional E-value: 8.4e-11 Methyltransf_12 2 eiGcGtGsllrallekl..pdieytgvDispsaiedakeklakren..nnnnnvnlealdlldldggssfDvvvasnvlhhl.kdir.e 84 ++Gc G++++ l+++ +++++gvD s ++ie+ +e l+++++ + v+l + d+l ld + +v ++++l+ + +d r sp|Q9I5G3|CMOA_PSEAE 62 DLGCSLGAVTQSLRRHVrnDGCRVIGVDNSHAMIERCSEYLHAQDAmyQELLPVELIEADILALDLQ-PTSLVAMNFTLQFVaPDQRlG 149 89**************9999**************999999888775226777888888888888887.***************66666* PP Methyltransf_12 85 aldniyklLkpgGrl 99 +l++i+++L pgG l sp|Q9I5G3|CMOA_PSEAE 150 LLRRIRQALLPGGAL 164 *************75 PP >> tr|Q9I0F9|Q9I0F9_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.8 0.0 1.2e-10 1.3e-08 1 98 [. 42 128 .. 42 129 .. 0.76 Alignments for each domain: == domain 1 score: 33.8 bits; conditional E-value: 1.2e-10 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L+ GcGtG+l+ l+e+ +++g+D s+++i++a+++ + + +v l + + l+ +s D+v+++++ h+l d+ ++ + tr|Q9I0F9|Q9I0F9_PSEAE 42 LDCGCGTGQLTVLLAER--FERVVGTDASAAQIDKAQARERVEY-----RVALAEDSG--LAA-ASADLVTVAQAAHWL-DLPRFYE 117 899**************..**************44444433333.....333333322..222.4*************9.9999999 PP Methyltransf_12 88 niyklLkpgGr 98 +++++ + +++ tr|Q9I0F9|Q9I0F9_PSEAE 118 EVRRVARADAI 128 99999998876 PP >> tr|Q9I4C2|Q9I4C2_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.2 0.0 1.8e-10 2e-08 1 99 [] 39 126 .. 39 126 .. 0.91 Alignments for each domain: == domain 1 score: 33.2 bits; conditional E-value: 1.8e-10 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireal 86 L+iGcG+G + +l + +y+ g+D+ ++ i++a+e +++ ++ + fD+v+++ + ++ d++++l tr|Q9I4C2|Q9I4C2_PSEAE 39 LDIGCGNGVSTVRLQPW---FRYVeGSDLGEALIAKARENYPEIRFSVSPAETFAPQR--------RFDLVTSATSFYWM-DRKQVL 113 8*******999999888...99999*********999999999998777777777666........9************8.****** PP Methyltransf_12 87 dniyklLkpgGrl 99 +++++L+pgG + tr|Q9I4C2|Q9I4C2_PSEAE 114 TRMADWLTPGGLF 126 ***********75 PP >> tr|G3XCZ7|G3XCZ7_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 33.5 0.0 1.5e-10 1.7e-08 24 98 .. 2 74 .. 1 75 [. 0.92 Alignments for each domain: == domain 1 score: 33.5 bits; conditional E-value: 1.5e-10 Methyltransf_12 24 tgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdniyklLkpgGr 98 +++D+s+++++ ++ a+r+ n + +a++l dg fD v++ hh++d+ al++++++LkpgG+ tr|G3XCZ7|G3XCZ7_PSEAE 2 VAYDLSAEMLAVVAQSAAERGMANIRTEQGKAESLPFADG--EFDFVFSRYSTHHWRDVGLALREVRRVLKPGGV 74 689*******999999999999888888888888888887..9*******************************7 PP >> tr|Q9I1T6|Q9I1T6_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 31.0 0.0 8.6e-10 9.6e-08 2 73 .. 142 209 .. 141 219 .. 0.89 Alignments for each domain: == domain 1 score: 31.0 bits; conditional E-value: 8.6e-10 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvas 73 +iGcG G + +++++ pd+e++g+Di+p+a+ d ++ a+ + + n++l dll++++g fD++va+ tr|Q9I1T6|Q9I1T6_PSEAE 142 DIGCGAGPGAIRIAMACPDAEVHGLDINPAAL-DLARVNAALAG--VGNLTLARSDLLSQAPG-RFDLIVAN 209 8*******************************.66666666664..66999999999999998.******97 PP >> sp|Q9I0S1|TAM_PSEAE Trans-aconitate 2-methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / C # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.6 0.0 2.4e-09 2.7e-07 2 99 .] 49 138 .. 48 138 .. 0.84 Alignments for each domain: == domain 1 score: 29.6 bits; conditional E-value: 2.4e-09 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdniyk 91 ++GcGtG ++ l+++ p +e++gvD s +++e a++ k + +++n ++ a+ + +a+ vlh l+d ++l ++ sp|Q9I0S1|TAM_PSEAE 49 DLGCGTGIATELLARRWPLAELYGVDSSVEMLEEAARLPIKASWERANLRHWCAER--------PASLLFAAAVLHFLEDHGKLLPRLLG 130 89******************************666555555554444444444444........7899********************** PP Methyltransf_12 92 lLkpgGrl 99 L+pgG+l sp|Q9I0S1|TAM_PSEAE 131 QLTPGGCL 138 ******87 PP >> sp|O87131|CHER1_PSEAE Chemotaxis protein methyltransferase 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2264 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 4.2 0.0 0.2 23 19 37 .. 136 154 .. 117 161 .. 0.76 2 ! 24.1 0.0 1.2e-07 1.4e-05 49 99 .] 192 245 .. 185 245 .. 0.90 Alignments for each domain: == domain 1 score: 4.2 bits; conditional E-value: 0.2 Methyltransf_12 19 pdieytgvDispsaiedak 37 +++++++D+s s++++ak sp|O87131|CHER1_PSEAE 136 AGVQIVATDLSGSMLTAAK 154 689************6665 PP == domain 2 score: 24.1 bits; conditional E-value: 1.2e-07 Methyltransf_12 49 nnvnlealdlldldgg.ssfDvvvasnvlhhl..kdirealdniyklLkpgGrl 99 ++v+++al+lld+ ++fD+v++ nvl ++ + +r++l +i+ LkpgG l sp|O87131|CHER1_PSEAE 192 SRVEFRALNLLDSYASlGKFDMVFCRNVLIYFsaEVKRDILLRIHGTLKPGGYL 245 678999999998877799***************99999**************86 PP >> tr|Q9I128|Q9I128_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.4 0.0 2.7e-09 3e-07 1 99 [] 55 153 .. 55 153 .. 0.80 Alignments for each domain: == domain 1 score: 29.4 bits; conditional E-value: 2.7e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg......ssfDvvvas.nvlhhlk 80 L++ c+ G+ + l++ ++++tgvDi sai d +++l++ ++ +++ + + l + + f v+as ++l +l tr|Q9I128|Q9I128_PSEAE 55 LHLQCNAGQDSLSLARL--GARVTGVDIGDSAI-DFARQLSRDSGIAADFQRDDILR----WLPvaatrgERFERVFASyGTLVWLS 134 6789*************..**************.66666666665333333333333....3334666889********9******* PP Methyltransf_12 81 direaldniyklLkpgGrl 99 d++++ d i+++L+pgGr+ tr|Q9I128|Q9I128_PSEAE 135 DLKRWADGIAQVLVPGGRF 153 *****************96 PP >> tr|Q9I227|Q9I227_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 29.5 0.0 2.7e-09 3e-07 1 99 [] 41 138 .. 41 138 .. 0.90 Alignments for each domain: == domain 1 score: 29.5 bits; conditional E-value: 2.7e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhl.kdire 84 L++GcG Gsll +++ p+++ + g++ sp +e+a+++l+ + + +l + dlldl++ + f ++ + vlh+l +d ++ tr|Q9I227|Q9I227_PSEAE 41 LDLGCGIGSLLLGGARRWPGLQRLwGIERSPLRLEQARAQLRGAGV----EARLLEGDLLDLPPLaERFELISMTAVLHWLyPDEER 123 8*****************9887777*********999999999995....66777777777777678******************** PP Methyltransf_12 85 aldniyklLkpgGrl 99 +++ ++++L G++ tr|Q9I227|Q9I227_PSEAE 124 LFRWVARHLEAQGVF 138 *********999975 PP >> tr|Q9HWK3|Q9HWK3_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.9 0.0 4e-09 4.4e-07 1 99 [] 45 137 .. 45 137 .. 0.90 Alignments for each domain: == domain 1 score: 28.9 bits; conditional E-value: 4e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvas.nvlhhl...kdir 83 L++ cGtG +r++l+ + + g+Di++ +++ a+++ + + + + +++ + D+++++ +h+ + +r tr|Q9HWK3|Q9HWK3_PSEAE 45 LDLACGTGPHVRHFLDF--GYRSAGLDINQPMLDLARQRCPEAHFSRQDMAGFQVDE--------PLDLITCFlYSIHYNaglERLR 121 89***************..**************999999999998665555555555........89******9999999999**** PP Methyltransf_12 84 ealdniyklLkpgGrl 99 + l++++ +L++gG++ tr|Q9HWK3|Q9HWK3_PSEAE 122 ACLASVHGALADGGVF 137 **************86 PP >> tr|Q9HW23|Q9HW23_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.6 0.0 4.9e-09 5.5e-07 1 95 [. 57 151 .. 57 155 .. 0.81 Alignments for each domain: == domain 1 score: 28.6 bits; conditional E-value: 4.9e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhl...kdi 82 L++ cG G++ l+ek d +++ g D s+++++ a + + +++ ++ a + d + ss+D +++ +lhh+ +d+ tr|Q9HW23|Q9HW23_PSEAE 57 LDLPCGAGRFWPLLAEK--DNRVIiGADNSADMLAVACAGQPDGVVKRVRPLQTSAFAI---DLPdSSVDNIFCMRLLHHIgeaDDR 138 899**************..777777*********6666666666666666665555554...44446****************9999 PP Methyltransf_12 83 realdniyklLkp 95 r +l++++++ ++ tr|Q9HW23|Q9HW23_PSEAE 139 RVLLREFHRVTRD 151 9*******99875 PP >> tr|Q9HTB3|Q9HTB3_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 28.2 0.0 6.5e-09 7.2e-07 1 98 [. 56 149 .. 56 150 .. 0.87 Alignments for each domain: == domain 1 score: 28.2 bits; conditional E-value: 6.5e-09 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 L++GcG G + +++ +++++++D ++ + +++ + ++ ++ + + l +d + D v+ +vl+h+++++++++ tr|Q9HTB3|Q9HTB3_PSEAE 56 LDLGCGEGVATLFAARQ--GASVIFTDSEEDKVRSLAQQVEAVARRPFTGLVSDSDPLPLRD--ACADKLVCMEVLEHVANPARVMA 138 8*******999999999..**************88888888888777666666655555554..59********************* PP Methyltransf_12 88 niyklLkpgGr 98 ++ +l +pg++ tr|Q9HTB3|Q9HTB3_PSEAE 139 ELVRLGRPGAQ 149 ********987 PP >> tr|Q9I2I3|Q9I2I3_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.5 0.0 2.2e-08 2.5e-06 2 99 .] 50 157 .. 49 157 .. 0.90 Alignments for each domain: == domain 1 score: 26.5 bits; conditional E-value: 2.2e-08 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..............ssfDvvvasn 74 + cG Gsl r+lle++p ++++++D + +e a++ la + +v++ ++dl d g + + ++s tr|Q9I2I3|Q9I2I3_PSEAE 50 DAACGPGSLGRRLLERFPAARVVALDADVMLLEIARTALAGFAE----RVRVVECDLTDP--GwtervaeareslagERPAALLSST 130 789************************************99996....999999998754..445999********7777777788* PP Methyltransf_12 75 vlhhl..kdirealdniyklLkpgGrl 99 +lh+l ++++ + +++ +lL+pgG+l tr|Q9I2I3|Q9I2I3_PSEAE 131 ALHWLspAELAGFYAQAGELLAPGGVL 157 *************************97 PP >> tr|Q9I0I8|Q9I0I8_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.6 0.0 2.1e-08 2.3e-06 13 99 .] 79 161 .. 68 161 .. 0.87 Alignments for each domain: == domain 1 score: 26.6 bits; conditional E-value: 2.1e-08 Methyltransf_12 13 alleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdniyklLkpgGrl 99 l+++ ++++t D s+ ++ d+ ++ a+r++ ++v+ + +dl+ + +sfD+v+ +++d+ ++++++++L+pgG+l tr|Q9I0I8|Q9I0I8_PSEAE 79 ILAAA--GARVTLFDASAGQL-DKDRQVAARDRLELACVQGDMRDLSTFAD-ASFDLVFNPISNLYVDDVLPVWRECARVLRPGGKL 161 45555..99************.**********************9876666.5*****988777889******************97 PP >> tr|Q9I5X8|Q9I5X8_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 26.0 0.0 3.1e-08 3.5e-06 1 99 [] 47 135 .. 47 135 .. 0.89 Alignments for each domain: == domain 1 score: 26.0 bits; conditional E-value: 3.1e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald 87 +++G+GtG ++r l++ ++++++v++ ++ ++ +e l + ++ + + + D+ v+++++h++ + eal+ tr|Q9I5X8|Q9I5X8_PSEAE 47 VDLGAGTGKFTRLLART--GARVVAVEPVDAMRAQLAEALPQVQALAGSAQSIPLANG-------FADALVCAQAFHWF-ATVEALE 123 59***************..**************9999999999976666666666664.......69***********7.77899** PP Methyltransf_12 88 niyklLkpgGrl 99 +++++L+ +Grl tr|Q9I5X8|Q9I5X8_PSEAE 124 EMRRVLTAEGRL 135 **********97 PP >> sp|Q9I5G4|CMOB_PSEAE tRNA U34 carboxymethyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CI # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 25.1 0.0 6.2e-08 6.9e-06 1 99 [] 126 221 .. 126 221 .. 0.77 Alignments for each domain: == domain 1 score: 25.1 bits; conditional E-value: 6.2e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieyt.gvDispsaiedakeklakrennnnnnvnlealdlldldgg.ssfDvvvasnvlhhlkdireald 87 L++GcG+G + ++l + ++e + gvD++ ++ + la+++ l l+dl+++ + fD+v++ +vl h + + + l sp|Q9I5G4|CMOB_PSEAE 126 LDVGCGNGYYQWRMLGA--GAESVvGVDPNWLFL---CQFLAAKRYLPELPAWHLPLALEDLPEKlEGFDTVFSMGVLYHRRSPIDHLL 209 8****************..666666*********...4444444443333333344444555555679********************* PP Methyltransf_12 88 niyklLkpgGrl 99 ++++Lk gG l sp|Q9I5G4|CMOB_PSEAE 210 ALKDCLKRGGEL 221 **********76 PP >> tr|Q9I4H6|Q9I4H6_PSEAE rRNA methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 24.6 0.0 9e-08 1e-05 1 47 [. 86 132 .. 86 149 .. 0.88 Alignments for each domain: == domain 1 score: 24.6 bits; conditional E-value: 9e-08 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennn 47 L+iGcG G ++++l e+l ++e +++Dis++a+++a ++ + + tr|Q9I4H6|Q9I4H6_PSEAE 86 LDIGCGEGYYSARLGEALAGAEGYALDISREAVKRACRRAPQLSWLV 132 8**********************************999999887655 PP >> tr|G3XCT5|G3XCT5_PSEAE Methyltransferase PilK OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.6 0.0 7.3e-07 8.1e-05 3 99 .] 122 257 .. 120 257 .. 0.72 Alignments for each domain: == domain 1 score: 21.6 bits; conditional E-value: 7.3e-07 Methyltransf_12 3 iGcGtGsllrallekl..........pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg............... 64 +Gc +G+ l++ +tg+Dis +a+++a++ ++ + l ++ + ++ g tr|G3XCT5|G3XCT5_PSEAE 122 VGCSSGEEPYSLAMCAaqvlrgqereDFFGVTGTDISLHALQRARQANYPARKLEQLEAGLVERYCERQADGsfsvktiltervcca 208 5666666555555555555677777678899**********5555544433333333333333333333333788999********* PP Methyltransf_12 65 ............ssfDvvvasnvlhhl..kdirealdniyklLkpgGrl 99 s Dv+++ n+l ++ +re+l+++++ L+pgG l tr|G3XCT5|G3XCT5_PSEAE 209 rlnvldlakapwSGMDVIFCQNLLIYFrrWRRREILNRLAERLAPGGLL 257 ***************************544455**************86 PP >> sp|Q9HUW3|PRMA_PSEAE Ribosomal protein L11 methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2264 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.0 3.3e-07 3.7e-05 1 97 [. 162 250 .. 162 252 .. 0.69 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 3.3e-07 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdni 89 L++GcG+G l+ a l + +g+Di+p+a+e+ + ++++ + + + + dl ++ + Dv va+ + + ++ ++ sp|Q9HUW3|PRMA_PSEAE 162 LDFGCGSGILAIAALLL-GAERAVGTDIDPQALEASRDNASRNGIEPARFPVYLPADLP---QR-QADVLVANILAG---PLVSLAPQL 242 8*******999999888.777888*********77777777777655555555555554...43.999988864432...345555555 PP Methyltransf_12 90 yklLkpgG 97 l++pgG sp|Q9HUW3|PRMA_PSEAE 243 TGLVRPGG 250 55555555 PP >> tr|Q9I279|Q9I279_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.8 0.0 3.1e-07 3.5e-05 64 99 .] 76 115 .. 39 115 .. 0.85 Alignments for each domain: == domain 1 score: 22.8 bits; conditional E-value: 3.1e-07 Methyltransf_12 64 g....ssfDvvvasnvlhhlkdirealdniyklLkpgGrl 99 s+fD vv+snvl h++d+ ++l + L+ gG l tr|Q9I279|Q9I279_PSEAE 76 VadieSAFDFVVCSNVLDHTADWIQFLVDCVGRLRTGGEL 115 1444489******************************976 PP >> sp|Q9HVH4|RLMG_PSEAE Ribosomal RNA large subunit methyltransferase G OS=Pseudomonas aeruginosa (strain ATCC 15692 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 22.0 0.0 5.8e-07 6.5e-05 2 98 .. 237 336 .. 236 337 .. 0.82 Alignments for each domain: == domain 1 score: 22.0 bits; conditional E-value: 5.8e-07 Methyltransf_12 2 eiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdireald... 87 ++GcG+G l a + +p++e+ vD s a++ a+e ++ +++ + ++ ++ +++ +g s D+v+++ +h + + ++l+ sp|Q9HVH4|RLMG_PSEAE 237 DLGCGNGVLGIAYALLNPQAELALVDESYMAVQSARENWRAALGERPATFRADDGLAGQAAG--SLDLVLCNPPFHQQQVVGDFLAwrm 323 89*************************************99999998888888888776665..********98888744334333333 PP Methyltransf_12 88 ..niyklLkpgGr 98 +++++L+ gG sp|Q9HVH4|RLMG_PSEAE 324 flQARDALAAGGE 336 3388888888886 PP >> sp|Q9HVG4|RSMC_PSEAE Ribosomal RNA small subunit methyltransferase C OS=Pseudomonas aeruginosa (strain ATCC 15692 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 20.0 0.0 2.3e-06 0.00026 1 99 [] 196 294 .. 196 294 .. 0.81 Alignments for each domain: == domain 1 score: 20.0 bits; conditional E-value: 2.3e-06 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhl.....kdire 84 L++GcG G l ++l ++ p +++ +D+++ a+e ++ la+++ ++ a d +d +++ ++v++ +h + ++ sp|Q9HVG4|RSMC_PSEAE 196 LDFGCGAGVLGAVLKRRYPASRLSLLDVDAFAVESSRLTLAANGL----DGEVIAADGIDGAPR-ELAAIVSNPPFHQGvhtdyQASER 279 8**************************************999996....345555555555555.888899886666544777777779 PP Methyltransf_12 85 aldniyklLkpgGrl 99 +l++++++L+pgG l sp|Q9HVG4|RSMC_PSEAE 280 LLQRAAEHLAPGGEL 294 999999999999975 PP >> tr|Q9HXD0|Q9HXD0_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 21.0 0.0 1.2e-06 0.00013 3 99 .] 42 127 .. 40 127 .. 0.76 Alignments for each domain: == domain 1 score: 21.0 bits; conditional E-value: 1.2e-06 Methyltransf_12 3 iGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdni 89 +GtG+ + l+++ e++++D s+++i ++ + ++ + + ea+d d ++fD+v ++++ h++ d ++ +++ tr|Q9HXD0|Q9HXD0_PSEAE 42 CATGTGQAALGLAQY--FGEVLASDTSTQQI-EHAVVHPGIRY---SVQDAEATDYPD----AAFDLVCVAQAWHWF-DHSRFNREL 117 568999999999999..**************.33333344443...333333333332....39************7.99999**** PP Methyltransf_12 90 yklLkpgGrl 99 ++L+pgG++ tr|Q9HXD0|Q9HXD0_PSEAE 118 LRVLRPGGVF 127 ********86 PP >> sp|Q9HXT5|WSPC_PSEAE Probable biofilm formation methyltransferase WspC OS=Pseudomonas aeruginosa (strain ATCC 15692 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 19.1 0.0 4.6e-06 0.00052 21 98 .. 126 232 .. 99 233 .. 0.82 Alignments for each domain: == domain 1 score: 19.1 bits; conditional E-value: 4.6e-06 Methyltransf_12 21 ieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...........................ssfDvvvasnvlhhl..k 80 e+ ++D+s+++ie+a++ r+ + +++ +++++ ++ ++g + +D v++ n+l ++ + sp|Q9HXT5|WSPC_PSEAE 126 FEVDALDVSARVIERASLGVYGRNSFRGDELGFRDRHFSEVAEGyqlaeqvrrkvrfrcgnlldpgllageAPYDFVFCRNLLIYFdrP 214 57778888888888888888888888888888888888888888888888888999999999999999999***************855 PP Methyltransf_12 81 direaldniyklLkpgGr 98 + e+++ +++lL+p+G sp|Q9HXT5|WSPC_PSEAE 215 TQSEVVEVLKRLLRPDGA 232 566*************95 PP >> sp|Q9HV34|SPEE2_PSEAE Polyamine aminopropyltransferase 2 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 18.9 0.0 5.1e-06 0.00057 1 98 [. 109 216 .. 109 217 .. 0.80 Alignments for each domain: == domain 1 score: 18.9 bits; conditional E-value: 5.1e-06 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.......ssfDvvvasnvlhhl.. 79 L iG+G G++lr++l + + + + vD++++ +e +e+l ++++ ++ + e l +dg+ s +Dvv+ ++v+ l sp|Q9HV34|SPEE2_PSEAE 109 LIIGGGEGATLREVLSHASVRRAVMVDLDRELVELCREHLFQWHQGAFDDPRCELLA---EDGRaylerdpSLYDVVI-IDVVDMLdn 192 569*****************************************9776666655444...5555678999999**987.466666666 PP Methyltransf_12 80 .....kdirealdniyklLkpgGr 98 +r++ + +++ L+pgG+ sp|Q9HV34|SPEE2_PSEAE 193 gpaqaLYTRQFYELLHSRLRPGGV 216 577667777778888888888886 PP >> sp|Q9I6V7|CHER2_PSEAE Chemotaxis protein methyltransferase 2 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2264 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 0.6 0.0 2.6 2.9e+02 16 37 .. 135 160 .. 128 169 .. 0.74 2 ! 16.3 0.0 3.4e-05 0.0038 49 98 .. 200 253 .. 189 254 .. 0.86 Alignments for each domain: == domain 1 score: 0.6 bits; conditional E-value: 2.6 Methyltransf_12 16 ekl....pdieytgvDispsaiedak 37 e+l p+++++++Di++ +++ a+ sp|Q9I6V7|CHER2_PSEAE 135 EALgsfdPPVKIVASDIDTGVLDCAR 160 44445568999********9995444 PP == domain 2 score: 16.3 bits; conditional E-value: 3.4e-05 Methyltransf_12 49 nnvnlealdlldldgg..ssfDvvvasnvlhhl..kdirealdniyklLkpgGr 98 + v++++++ll+ d + D++++ nv+ ++ ++ ++l+++ +lL+p+G sp|Q9I6V7|CHER2_PSEAE 200 QLVEFRQINLLEADWSiaGELDAIFCRNVMIYFdkPTQTRLLERMVALLRPEGL 253 5688999999999998999**************854555*************97 PP >> sp|Q9HVC8|PRMC_PSEAE Release factor glutamine methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.5 0.0 2.9e-05 0.0032 1 52 [. 113 163 .. 113 182 .. 0.86 2 ? -0.5 0.0 6 6.6e+02 79 99 .] 213 233 .. 205 233 .. 0.89 Alignments for each domain: == domain 1 score: 16.5 bits; conditional E-value: 2.9e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvn 52 L++G+GtG+++ al+ + p +++t+vD ++a+ + +e+ ++r n +v+ sp|Q9HVC8|PRMC_PSEAE 113 LDLGTGTGAIALALASERPLWTVTAVDRVEEAV-ALAERNRQRLLLENVEVR 163 8********************************.788887777766665554 PP == domain 2 score: -0.5 bits; conditional E-value: 6 Methyltransf_12 79 lkdirealdniyklLkpgGrl 99 l+dir++++++ ++L ++G+l sp|Q9HVC8|PRMC_PSEAE 213 LDDIRQIVAQAPRHLLDEGWL 233 589************999986 PP >> tr|Q9HYR0|Q9HYR0_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 17.0 0.0 2e-05 0.0023 1 57 [. 61 113 .. 61 155 .. 0.68 Alignments for each domain: == domain 1 score: 17.0 bits; conditional E-value: 2e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnleald 57 +e+Gc +G+ l+ + +++y+gvD++++aie ++++ +++ + + + + d tr|Q9HYR0|Q9HYR0_PSEAE 61 VELGCYDGRALEIARLL--NARYLGVDLDQRAIETLRTRIEREGMSD--RADTVVDD 113 69************999..**************99998888877544..33333333 PP >> sp|Q9HV78|TRMA_PSEAE tRNA/tmRNA (uracil-C(5))-methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 16.1 0.0 3.8e-05 0.0042 1 60 [. 212 269 .. 212 292 .. 0.89 Alignments for each domain: == domain 1 score: 16.1 bits; conditional E-value: 3.8e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlld 60 Le+ cG+G+++ +l+ + ++++++is+s++++a + la++ +n++ v+l a++l + sp|Q9HV78|TRMA_PSEAE 212 LELYCGNGNFTLPLATR--VRKVLATEISKSSVNAALANLADNAVDNVSLVRLSAEELTQ 269 7889*************..999***************************99999998765 PP >> sp|Q9HXG4|RLMF_PSEAE Ribosomal RNA large subunit methyltransferase F OS=Pseudomonas aeruginosa (strain ATCC 15692 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 15.7 0.0 5.1e-05 0.0057 1 79 [. 122 205 .. 122 222 .. 0.79 Alignments for each domain: == domain 1 score: 15.7 bits; conditional E-value: 5.1e-05 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg......ssfDvvvasnvlhhl 79 L++G+G + l + +++++g Di+p++++ a++ la++ ++++ ++l+ + + + + + fD+ +++ +h+ sp|Q9HXG4|RLMF_PSEAE 122 LDVGTGANCIYPLLGHHEYGWRFVGADIDPQSLASAAAILAANP-RFAAAIELRRQPDRRQIFQgligvdERFDMTLCNPPFHAS 205 8999997777777777779**************88888888877.5888888887776666555899999999999998877775 PP >> tr|G3XCV2|G3XCV2_PSEAE Dihydroaeruginoic acid synthetase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ! 14.3 0.0 0.00015 0.016 19 99 .] 1151 1226 .. 1135 1226 .. 0.79 Alignments for each domain: == domain 1 score: 14.3 bits; conditional E-value: 0.00015 Methyltransf_12 19 pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvasnvlhhlkdirealdniyklLkpgGrl 99 p++e+t + s+ +++a+++l +r+ l++ l ++ + +D v+++ +lh+ + re l+ +++lL+p Grl tr|G3XCV2|G3XCV2_PSEAE 1151 PGLELTLFERSRVLLDAAATRLPERIV----VQALDDGLLPAEHL-GRYDRVISFAALHAYEASREGLALAAALLRPQGRL 1226 689999999999999999999999994....22333333333333.5********************************97 PP >> tr|Q9HU01|Q9HU01_PSEAE Probable 3-hydroxyacyl-CoA dehydrogenase OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 2 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.8 0.0 0.0002 0.022 4 98 .. 14 117 .. 12 118 .. 0.83 Alignments for each domain: == domain 1 score: 13.8 bits; conditional E-value: 0.0002 Methyltransf_12 4 GcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg..........ssfDvvvasnvlhhlk 80 G+Gt +++ ++ ++++ ++D +p+++++a a+ ++n+ + ++ +++++ + + D+v+ v ++l+ tr|Q9HU01|Q9HU01_PSEAE 14 GAGTMGRGIVMCLANAGLDVQWLDSNPQMLNQALGAVADTYAHNVRQGRIGEEEAAARRARitpvqhlaamREADLVIE-AVYENLE 99 5555333333333337************************************9999888779*******99999*9986.6999999 PP Methyltransf_12 81 direaldniyklLkpgGr 98 ++++++++ ++Lkp ++ tr|Q9HU01|Q9HU01_PSEAE 100 LKQSIFRELDAALKPSAV 117 999**********99876 PP >> sp|Q9X6R0|SPEE1_PSEAE Polyamine aminopropyltransferase 1 OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 13.1 0.0 0.00035 0.039 1 72 [. 79 154 .. 79 185 .. 0.76 Alignments for each domain: == domain 1 score: 13.1 bits; conditional E-value: 0.00035 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg.......ssfDvvva 72 L iG+G+G +lr+++++ + ++t v+i+ +++ ke l +++ ++ + l+l +dg + fDv+++ sp|Q9X6R0|SPEE1_PSEAE 79 LIIGGGDGGMLREVAKHKSVERITMVEIDGTVVDMCKEFLPNHSQGAFDDPR---LNLVIDDGMrfvatteERFDVIIS 154 569***************9999999999999996666666666655544444...444444444567899999999985 PP >> sp|Q9I347|PRMB_PSEAE 50S ribosomal protein L3 glutamine methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 156 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 11.8 0.0 0.00088 0.097 1 73 [. 130 200 .. 130 204 .. 0.88 2 ? -0.8 0.0 7.3 8.2e+02 25 45 .. 230 250 .. 227 271 .. 0.78 Alignments for each domain: == domain 1 score: 11.8 bits; conditional E-value: 0.00088 Methyltransf_12 1 LeiGcGtGsllralleklpdieytgvDispsaiedakeklakrennnnnnvnlealdlldldggssfDvvvas 73 L++ +G+G + a++ +++++e++ D+s +a+e a + +++ ++v + d + +g+ fD++v++ sp|Q9I347|PRMB_PSEAE 130 LDLCTGSGCIGIACAYAFEQAEVVLADLSFDALEVANVNIERHDL--GERVYTVQGDGFAGLPGQRFDLIVSN 200 79999****************************777777777665..568999999999999999*****975 PP == domain 2 score: -0.8 bits; conditional E-value: 7.3 Methyltransf_12 25 gvDispsaiedakeklakren 45 g+D+ +++++ a+ +l++++ sp|Q9I347|PRMB_PSEAE 230 GLDLVRRMLAEAADHLSEKGL 250 678888888888888887665 PP >> tr|Q9I3U2|Q9I3U2_PSEAE Uncharacterized protein OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 # score bias c-Evalue i-Evalue hmmfrom hmm to alifrom ali to envfrom env to acc --- ------ ----- --------- --------- ------- ------- ------- ------- ------- ------- ---- 1 ? 12.4 0.0 0.00055 0.061 1 72 [. 84 159 .. 84 181 .. 0.83 Alignments for each domain: == domain 1 score: 12.4 bits; conditional E-value: 0.00055 Methyltransf_12 1 LeiGcGtGsllrallekl...pdieytgvDispsaiedakeklakrennnnnnvnlealdlldldgg...ssfDvvva 72 +e+G+ G + +l+++l + +++g+++ ps e+a++ la+ + + v+l++ d+l++ + +s D+v++ tr|Q9I3U2|Q9I3U2_PSEAE 84 VEFGTSFGLSTLHLAAALrdnGGGRLIGSEFEPSKAERARRNLAAGGLLD--LVELREGDALQTLAKdlpDSIDLVLL 159 5899999999999999999989***********************99866..55555556555555556699999985 PP Internal pipeline statistics summary: ------------------------------------- Query model(s): 1 (99 nodes) Target sequences: 5563 (1857172 residues searched) Passed MSV filter: 228 (0.0409851); expected 111.3 (0.02) Passed bias filter: 225 (0.0404458); expected 111.3 (0.02) Passed Vit filter: 72 (0.0129427); expected 5.6 (0.001) Passed Fwd filter: 50 (0.00898796); expected 0.1 (1e-05) Initial search space (Z): 5563 [actual number of targets] Domain search space (domZ): 50 [number of targets reported over threshold] # CPU time: 0.06u 0.00s 00:00:00.06 Elapsed: 00:00:00.03 # Mc/sec: 6128.67 // [ok]